View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20429_low_10 (Length: 385)
Name: NF20429_low_10
Description: NF20429
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20429_low_10 |
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Alignment Details
Target: chr7 (Bit Score: 326; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 326; E-Value: 0
Query Start/End: Original strand, 8 - 369
Target Start/End: Original strand, 32959078 - 32959439
Alignment:
| Q |
8 |
cacagacccaacgatccaattgtcaaaagctttggattccatcaaacttgtaatgcttccgaccatgaatgtcataaaacgttcgaagttacaaactcgt |
107 |
Q |
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| T |
32959078 |
cacagacccaacgatccaattgtcaaaagctttgaatttcatcaaacttgtaatgcttccgaccataaatgtcataaaacgttcgaagttacaaactcgt |
32959177 |
T |
|
| Q |
108 |
cgtcggtaacacaccttcaacggctatcttcgatagtcataaagacgactgtataaaagagttcttaagccataactcaaggtgtacattatctatcatt |
207 |
Q |
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|||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| |
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| T |
32959178 |
cgtccgtaacacaccttcaacggctatcttcgatagtcatatagacgactgtataaaagagttcttaaaccacaactcaaggtgtacattatctatcatt |
32959277 |
T |
|
| Q |
208 |
tcaatatcctccaagtcgcatctcgatggttgctgctccataaagataatcactactcgtggtcaatgtttaatacacattttatatatgtatggctaga |
307 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
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| T |
32959278 |
tcaatatcctccaagtcgcatctcgatggttgctgctccataaagataatcactactcgtgttcaatgtttaatacacattttatatatgtatggctaga |
32959377 |
T |
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| Q |
308 |
ggatattaataaaagttcttctcatccttatcggtttcataagtctcttttcaccttatttc |
369 |
Q |
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||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
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| T |
32959378 |
ggatattaataaaagttcttctcatccttatcggtttcatatgtctcttttcaccttatttc |
32959439 |
T |
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