View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2042_low_6 (Length: 274)
Name: NF2042_low_6
Description: NF2042
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2042_low_6 |
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Alignment Details
Target: chr1 (Bit Score: 252; Significance: 1e-140; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 252; E-Value: 1e-140
Query Start/End: Original strand, 17 - 268
Target Start/End: Complemental strand, 39522151 - 39521900
Alignment:
| Q |
17 |
atataatacatgatcaattttcacgtgacaaggaatatatagtgagcatttggacaaccaaaagcatggtactaagtccgtaacatgtttgatcatttta |
116 |
Q |
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| T |
39522151 |
atataatacatgatcaattttcacgtgacaaggaatatatagtgagcatttggacaaccaaaagcatggtactaagtccgtaacatgtttgatcatttta |
39522052 |
T |
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| Q |
117 |
gattacaatacaacaaacattcctgtttcacactccaaagaatcttctcactttttacattacaattcacacttaacttcagtggaagtctccaaaatct |
216 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
39522051 |
gattacaatacaacaaacattcctgtttcacactccaaagaatcttctcactttttacattacaattcacacttaacttcagtggaagtctccaaaatct |
39521952 |
T |
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| Q |
217 |
cctcatcagattcagaaagtgcagagtacaataatgtcctttcctttgcttc |
268 |
Q |
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| T |
39521951 |
cctcatcagattcagaaagtgcagagtacaataatgtcctttcctttgcttc |
39521900 |
T |
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