View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20433_high_20 (Length: 284)
Name: NF20433_high_20
Description: NF20433
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20433_high_20 |
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Alignment Details
Target: chr4 (Bit Score: 267; Significance: 1e-149; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 267; E-Value: 1e-149
Query Start/End: Original strand, 1 - 267
Target Start/End: Complemental strand, 46358718 - 46358452
Alignment:
| Q |
1 |
tgaaaacatgctgaagaaggcagaaagaacattaaaagaaagtaaaattcatgtcagccattaaagaggaccattaaggcagaaagaacaaagttatgaa |
100 |
Q |
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| T |
46358718 |
tgaaaacatgctgaagaaggcagaaagaacattaaaagaaagtaaaattcatgtcagccattaaagaggaccattaaggcagaaagaacaaagttatgaa |
46358619 |
T |
|
| Q |
101 |
ttttaaacccttgaatggaaaatggaccattaagttgaagtttaaataaaataaaaacaatgccaatggacttcaactttgatatataaaagactcggtt |
200 |
Q |
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| T |
46358618 |
ttttaaacccttgaatggaaaatggaccattaagttgaagtttaaataaaataaaaacaatgccaatggacttcaactttgatatataaaagactcggtt |
46358519 |
T |
|
| Q |
201 |
ccaatatttaaaaccaggtcaaaggaaatcgttaccttaaatttcttattatacattcagtggcatt |
267 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
46358518 |
ccaatatttaaaaccaggtcaaaggaaatcgttaccttaaatttcttattatacattcagtggcatt |
46358452 |
T |
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