View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20435_high_39 (Length: 299)
Name: NF20435_high_39
Description: NF20435
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20435_high_39 |
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Alignment Details
Target: chr7 (Bit Score: 242; Significance: 1e-134; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 1 - 282
Target Start/End: Complemental strand, 31693242 - 31692961
Alignment:
| Q |
1 |
ttatatcagctagtagtgatataactaactttatatctaatagtgtgtgcgattgtagaccgaaatttaaaacaatggcattgaatttactctttaggca |
100 |
Q |
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| T |
31693242 |
ttatatcagctggtagtgacataactaattttatatctaattgtgcatgcgattgtagaccggaatttaaaacaatgacgttgaatttactctttaggca |
31693143 |
T |
|
| Q |
101 |
tagtgtttttcttgctactgaataactttgccaaatttgggataactttctttctcttcttaagagtgaaaggactaatgtgccgagttgcgggtgaagc |
200 |
Q |
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||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31693142 |
tagtgtttttcttgctactgaataactttgccaaattcgggataactttctttctcttcttaagagtgaaaggactaatgtgccgagttgcgggtgaagc |
31693043 |
T |
|
| Q |
201 |
agcagacttctgaaacttgattcttttagcaggagtcatacttccatttgatttaatactctttctagaaatagctctctgc |
282 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31693042 |
agcagacttctgaaacttgattcttttagcaggagtcatacttccatttgatttaatactctttctagaaatagctctctgc |
31692961 |
T |
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