View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20435_high_52 (Length: 256)

Name: NF20435_high_52
Description: NF20435
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20435_high_52
NF20435_high_52
[»] chr5 (45 HSPs)
chr5 (209-256)||(5577436-5577483)
chr5 (210-256)||(36779258-36779304)
chr5 (208-256)||(19292225-19292272)
chr5 (209-256)||(25823797-25823842)
chr5 (209-256)||(4992892-4992938)
chr5 (209-256)||(5790577-5790623)
chr5 (209-256)||(20730924-20730970)
chr5 (210-256)||(9587508-9587553)
chr5 (210-256)||(19293265-19293310)
chr5 (210-256)||(39048527-39048573)
chr5 (210-256)||(41084209-41084254)
chr5 (210-256)||(41210298-41210343)
chr5 (208-256)||(27187929-27187975)
chr5 (208-256)||(6864329-6864376)
chr5 (209-256)||(5573962-5574008)
chr5 (209-256)||(33159916-33159962)
chr5 (210-256)||(38978485-38978529)
chr5 (210-256)||(1144447-1144492)
chr5 (210-256)||(5575107-5575152)
chr5 (210-256)||(5576347-5576392)
chr5 (210-256)||(6834483-6834528)
chr5 (210-256)||(10622740-10622785)
chr5 (210-256)||(11664953-11664998)
chr5 (211-256)||(13544558-13544601)
chr5 (208-254)||(17640351-17640396)
chr5 (208-254)||(19897390-19897435)
chr5 (210-256)||(27188789-27188834)
chr5 (210-256)||(36499282-36499327)
chr5 (210-256)||(38425021-38425066)
chr5 (206-256)||(39760565-39760614)
chr5 (211-256)||(6915464-6915508)
chr5 (207-256)||(12403556-12403604)
chr5 (207-256)||(17526890-17526938)
chr5 (207-256)||(17647278-17647326)
chr5 (205-254)||(23094810-23094858)
chr5 (208-256)||(26242775-26242821)
chr5 (208-256)||(26359922-26359968)
chr5 (211-256)||(38977559-38977603)
chr5 (208-256)||(730427-730475)
chr5 (208-256)||(8407379-8407426)
chr5 (208-256)||(11445893-11445940)
chr5 (210-254)||(17641787-17641830)
chr5 (208-256)||(21639909-21639956)
chr5 (210-254)||(23093239-23093282)
chr5 (205-249)||(38396215-38396258)
[»] chr2 (29 HSPs)
chr2 (207-256)||(12138479-12138528)
chr2 (208-256)||(44748041-44748089)
chr2 (209-256)||(1090542-1090589)
chr2 (209-256)||(6924104-6924151)
chr2 (208-256)||(17815460-17815507)
chr2 (208-256)||(34926113-34926160)
chr2 (209-256)||(3106147-3106193)
chr2 (210-256)||(3364107-3364151)
chr2 (209-256)||(28780080-28780126)
chr2 (210-256)||(9758284-9758329)
chr2 (207-256)||(17816281-17816328)
chr2 (208-256)||(2695914-2695961)
chr2 (212-256)||(18736637-18736680)
chr2 (209-256)||(5439107-5439153)
chr2 (210-256)||(6731457-6731501)
chr2 (209-256)||(7277799-7277845)
chr2 (209-256)||(9707866-9707912)
chr2 (209-256)||(10315197-10315243)
chr2 (210-256)||(11871438-11871482)
chr2 (210-256)||(15829909-15829953)
chr2 (210-256)||(15830994-15831038)
chr2 (210-256)||(39939276-39939320)
chr2 (206-256)||(6730406-6730455)
chr2 (211-256)||(4647101-4647145)
chr2 (211-256)||(7275681-7275725)
chr2 (207-256)||(18059472-18059520)
chr2 (208-256)||(38935719-38935765)
chr2 (207-256)||(41287477-41287525)
chr2 (208-256)||(45160401-45160448)
[»] chr1 (73 HSPs)
chr1 (199-256)||(22389250-22389307)
chr1 (210-256)||(44209101-44209146)
chr1 (209-256)||(6918843-6918888)
chr1 (208-256)||(16834363-16834410)
chr1 (208-256)||(38787530-38787577)
chr1 (208-256)||(46294435-46294482)
chr1 (209-256)||(18806630-18806676)
chr1 (209-256)||(48803988-48804035)
chr1 (209-256)||(52869657-52869703)
chr1 (207-256)||(1798762-1798809)
chr1 (210-256)||(13698381-13698427)
chr1 (210-256)||(16798304-16798349)
chr1 (210-256)||(24253169-24253214)
chr1 (210-256)||(31675384-31675429)
chr1 (210-256)||(31676474-31676519)
chr1 (210-256)||(40315638-40315683)
chr1 (210-256)||(43281174-43281219)
chr1 (210-256)||(44397597-44397642)
chr1 (210-256)||(44431180-44431225)
chr1 (210-256)||(45141467-45141512)
chr1 (211-256)||(11201899-11201943)
chr1 (208-256)||(27235222-27235268)
chr1 (207-256)||(29487972-29488020)
chr1 (210-256)||(13697589-13697632)
chr1 (209-256)||(18542328-18542373)
chr1 (209-256)||(18807711-18807756)
chr1 (209-256)||(30754044-30754089)
chr1 (208-256)||(36305119-36305166)
chr1 (208-256)||(44210131-44210178)
chr1 (209-256)||(1799816-1799862)
chr1 (209-256)||(6783127-6783173)
chr1 (210-256)||(28296550-28296594)
chr1 (206-256)||(32073696-32073744)
chr1 (210-256)||(38064759-38064805)
chr1 (210-256)||(43759553-43759597)
chr1 (210-256)||(44432329-44432373)
chr1 (210-256)||(48721568-48721612)
chr1 (210-256)||(8896920-8896965)
chr1 (210-256)||(11706720-11706765)
chr1 (210-256)||(22388364-22388409)
chr1 (210-256)||(24250408-24250453)
chr1 (207-256)||(24480516-24480563)
chr1 (210-256)||(26615860-26615905)
chr1 (210-256)||(27234232-27234277)
chr1 (214-256)||(29487290-29487331)
chr1 (211-256)||(32186066-32186109)
chr1 (210-256)||(32815135-32815180)
chr1 (210-256)||(34557945-34557990)
chr1 (210-256)||(40117009-40117054)
chr1 (210-256)||(49217060-49217104)
chr1 (210-256)||(50938528-50938574)
chr1 (210-256)||(52360381-52360426)
chr1 (207-256)||(8741722-8741770)
chr1 (209-254)||(11343426-11343470)
chr1 (209-254)||(11501446-11501490)
chr1 (209-254)||(14282779-14282823)
chr1 (209-254)||(14284265-14284309)
chr1 (207-256)||(29330123-29330171)
chr1 (208-256)||(38788610-38788656)
chr1 (208-256)||(40314469-40314515)
chr1 (211-256)||(42413103-42413147)
chr1 (211-256)||(48803362-48803407)
chr1 (207-254)||(4564223-4564268)
chr1 (209-256)||(6917145-6917190)
chr1 (210-254)||(11341969-11342012)
chr1 (210-254)||(11499988-11500031)
chr1 (208-256)||(29329288-29329335)
chr1 (210-256)||(29357358-29357401)
chr1 (228-256)||(36723301-36723329)
chr1 (210-254)||(42813867-42813910)
chr1 (209-256)||(44396465-44396510)
chr1 (205-256)||(50643663-50643712)
chr1 (213-256)||(51001052-51001093)
[»] scaffold0031 (3 HSPs)
scaffold0031 (205-256)||(95049-95099)
scaffold0031 (210-256)||(104550-104595)
scaffold0031 (208-256)||(94244-94291)
[»] chr7 (51 HSPs)
chr7 (209-256)||(11455416-11455462)
chr7 (209-256)||(29417150-29417196)
chr7 (205-256)||(48611341-48611391)
chr7 (210-256)||(17774288-17774333)
chr7 (210-256)||(21125705-21125750)
chr7 (210-256)||(45856484-45856529)
chr7 (207-256)||(29418191-29418239)
chr7 (198-254)||(31285457-31285513)
chr7 (209-256)||(45258918-45258963)
chr7 (210-256)||(22021769-22021813)
chr7 (210-256)||(33228635-33228679)
chr7 (209-255)||(26928070-26928115)
chr7 (210-256)||(33697399-33697444)
chr7 (210-256)||(34955642-34955687)
chr7 (210-256)||(44472881-44472926)
chr7 (207-256)||(35499404-35499452)
chr7 (208-256)||(15753371-15753418)
chr7 (209-256)||(22023046-22023091)
chr7 (213-256)||(34959208-34959249)
chr7 (210-256)||(22113870-22113914)
chr7 (207-254)||(35394783-35394829)
chr7 (210-256)||(40525527-40525571)
chr7 (210-256)||(43774526-43774570)
chr7 (207-256)||(18829060-18829107)
chr7 (207-256)||(18830256-18830303)
chr7 (210-248)||(22599800-22599838)
chr7 (206-256)||(24181871-24181920)
chr7 (210-256)||(33227667-33227712)
chr7 (210-256)||(34994745-34994790)
chr7 (210-256)||(48937255-48937300)
chr7 (210-255)||(5852388-5852432)
chr7 (207-256)||(12231004-12231052)
chr7 (208-256)||(14103964-14104010)
chr7 (208-256)||(14413981-14414027)
chr7 (211-256)||(21386393-21386437)
chr7 (209-256)||(21458607-21458651)
chr7 (211-256)||(28294240-28294284)
chr7 (209-256)||(44378790-44378834)
chr7 (209-256)||(44387657-44387701)
chr7 (209-256)||(44471839-44471883)
chr7 (207-256)||(46100959-46101007)
chr7 (211-256)||(48344384-48344428)
chr7 (208-256)||(5668243-5668290)
chr7 (209-256)||(17775362-17775407)
chr7 (208-256)||(19071437-19071484)
chr7 (210-254)||(30163560-30163604)
chr7 (210-254)||(31286937-31286980)
chr7 (208-256)||(34345218-34345265)
chr7 (210-254)||(35393163-35393206)
chr7 (213-256)||(45259706-45259747)
chr7 (208-256)||(46230260-46230307)
[»] chr6 (25 HSPs)
chr6 (205-256)||(23075390-23075440)
chr6 (211-256)||(23074300-23074344)
chr6 (210-256)||(5430622-5430667)
chr6 (210-256)||(32155373-32155418)
chr6 (208-256)||(1562893-1562940)
chr6 (208-256)||(5430188-5430235)
chr6 (208-256)||(34657801-34657848)
chr6 (209-256)||(14608050-14608096)
chr6 (210-256)||(22504224-22504268)
chr6 (210-256)||(1050932-1050977)
chr6 (210-256)||(1897206-1897251)
chr6 (210-252)||(10624456-10624497)
chr6 (210-256)||(11098928-11098973)
chr6 (210-256)||(21784340-21784385)
chr6 (210-256)||(29724168-29724213)
chr6 (206-254)||(4137652-4137698)
chr6 (207-256)||(11624626-11624674)
chr6 (212-256)||(14432044-14432086)
chr6 (208-256)||(23065323-23065369)
chr6 (210-254)||(1387663-1387706)
chr6 (208-256)||(2318521-2318568)
chr6 (210-254)||(4138986-4139029)
chr6 (208-256)||(8743130-8743177)
chr6 (210-256)||(22505033-22505076)
chr6 (210-256)||(32800076-32800119)
[»] chr4 (78 HSPs)
chr4 (209-256)||(7971921-7971967)
chr4 (205-256)||(9360585-9360635)
chr4 (209-256)||(30317557-30317603)
chr4 (213-256)||(35194936-35194979)
chr4 (205-256)||(36870092-36870142)
chr4 (210-256)||(36111478-36111523)
chr4 (207-256)||(39334466-39334513)
chr4 (210-256)||(53140019-53140064)
chr4 (207-256)||(48800470-48800518)
chr4 (208-256)||(3886206-3886254)
chr4 (212-256)||(6194950-6194993)
chr4 (208-256)||(23591297-23591344)
chr4 (209-256)||(6334989-6335036)
chr4 (209-256)||(6335939-6335986)
chr4 (209-256)||(15031880-15031926)
chr4 (209-256)||(37687494-37687540)
chr4 (205-256)||(38575536-38575586)
chr4 (210-256)||(4939854-4939899)
chr4 (210-256)||(6644018-6644063)
chr4 (210-256)||(13966696-13966741)
chr4 (207-256)||(15030819-15030866)
chr4 (210-256)||(26171677-26171722)
chr4 (210-256)||(31559924-31559969)
chr4 (210-256)||(40146444-40146490)
chr4 (208-256)||(6644976-6645022)
chr4 (208-256)||(10663824-10663870)
chr4 (208-256)||(10877969-10878015)
chr4 (208-256)||(22525331-22525377)
chr4 (204-256)||(56279761-56279811)
chr4 (209-256)||(1862183-1862228)
chr4 (207-256)||(22524299-22524344)
chr4 (209-256)||(23520141-23520186)
chr4 (209-256)||(30288654-30288701)
chr4 (209-256)||(36871026-36871071)
chr4 (208-256)||(41611493-41611540)
chr4 (209-256)||(47309261-47309306)
chr4 (208-256)||(55082431-55082478)
chr4 (209-256)||(1613444-1613490)
chr4 (209-256)||(4941130-4941176)
chr4 (209-256)||(17606900-17606947)
chr4 (205-256)||(19169287-19169337)
chr4 (209-256)||(23162032-23162078)
chr4 (210-256)||(26172499-26172543)
chr4 (209-256)||(29617629-29617675)
chr4 (209-256)||(29761366-29761412)
chr4 (210-256)||(29762471-29762515)
chr4 (210-256)||(32465651-32465695)
chr4 (209-256)||(34016855-34016901)
chr4 (205-256)||(37998026-37998076)
chr4 (210-256)||(41610066-41610110)
chr4 (209-256)||(42260360-42260406)
chr4 (210-256)||(55497315-55497359)
chr4 (210-256)||(6955540-6955586)
chr4 (208-254)||(16508214-16508259)
chr4 (210-256)||(21312242-21312287)
chr4 (210-256)||(25490275-25490320)
chr4 (210-256)||(31559032-31559077)
chr4 (210-256)||(36077328-36077373)
chr4 (210-256)||(56280571-56280616)
chr4 (209-254)||(16506868-16506912)
chr4 (208-256)||(17214934-17214980)
chr4 (207-256)||(22535194-22535242)
chr4 (209-254)||(23102373-23102418)
chr4 (207-256)||(25706181-25706229)
chr4 (208-249)||(45765719-45765759)
chr4 (207-256)||(48614141-48614189)
chr4 (207-248)||(56444277-56444317)
chr4 (210-254)||(677046-677089)
chr4 (210-254)||(2613631-2613674)
chr4 (210-254)||(2615093-2615136)
chr4 (210-254)||(7390166-7390209)
chr4 (208-256)||(22731055-22731102)
chr4 (208-256)||(26649657-26649704)
chr4 (209-256)||(34733324-34733369)
chr4 (209-256)||(35194014-35194059)
chr4 (210-254)||(50662995-50663038)
chr4 (210-254)||(50664493-50664536)
chr4 (210-254)||(55978475-55978518)
[»] chr3 (59 HSPs)
chr3 (205-256)||(25360381-25360431)
chr3 (209-256)||(29587097-29587143)
chr3 (209-256)||(36026968-36027014)
chr3 (209-256)||(45252527-45252574)
chr3 (210-256)||(1033882-1033927)
chr3 (210-256)||(6757004-6757049)
chr3 (206-256)||(54627019-54627068)
chr3 (207-256)||(31585333-31585381)
chr3 (210-256)||(20186401-20186445)
chr3 (209-256)||(40066633-40066679)
chr3 (210-256)||(987131-987176)
chr3 (210-256)||(20820305-20820350)
chr3 (210-256)||(35234839-35234884)
chr3 (210-256)||(40791348-40791393)
chr3 (210-256)||(40792416-40792461)
chr3 (210-256)||(46651220-46651265)
chr3 (210-251)||(6756713-6756753)
chr3 (208-256)||(9104044-9104090)
chr3 (207-256)||(45251533-45251582)
chr3 (208-256)||(11653864-11653911)
chr3 (208-256)||(45712408-45712455)
chr3 (209-256)||(3938311-3938357)
chr3 (213-256)||(6756848-6756890)
chr3 (209-256)||(10657207-10657253)
chr3 (209-256)||(11652851-11652897)
chr3 (210-256)||(19961513-19961557)
chr3 (209-256)||(34503685-34503731)
chr3 (209-256)||(35235985-35236032)
chr3 (209-256)||(40514989-40515035)
chr3 (209-256)||(50672668-50672714)
chr3 (210-256)||(52395205-52395249)
chr3 (210-256)||(2445290-2445335)
chr3 (208-254)||(14509170-14509215)
chr3 (211-256)||(20189596-20189639)
chr3 (210-256)||(37117217-37117262)
chr3 (210-256)||(45258761-45258806)
chr3 (210-256)||(53628283-53628328)
chr3 (207-256)||(23781808-23781856)
chr3 (207-256)||(25068384-25068432)
chr3 (207-256)||(40279223-40279271)
chr3 (207-256)||(45969315-45969363)
chr3 (211-256)||(54492715-54492759)
chr3 (210-254)||(1136240-1136283)
chr3 (213-256)||(6756551-6756592)
chr3 (208-256)||(13342428-13342475)
chr3 (209-256)||(24782086-24782131)
chr3 (208-256)||(33980407-33980454)
chr3 (211-255)||(35236032-35236075)
chr3 (208-256)||(36791805-36791852)
chr3 (208-256)||(40783482-40783529)
chr3 (210-254)||(49724626-49724669)
chr3 (210-254)||(49726058-49726101)
chr3 (210-256)||(50314528-50314571)
chr3 (210-254)||(52118335-52118378)
chr3 (210-254)||(52946366-52946409)
chr3 (210-254)||(52947858-52947901)
chr3 (205-256)||(54602154-54602203)
chr3 (209-256)||(54801289-54801334)
chr3 (209-256)||(55481337-55481382)
[»] scaffold0006 (2 HSPs)
scaffold0006 (210-256)||(43456-43501)
scaffold0006 (206-256)||(41321-41370)
[»] scaffold0340 (1 HSPs)
scaffold0340 (209-256)||(1330-1376)
[»] chr8 (40 HSPs)
chr8 (209-256)||(38713362-38713408)
chr8 (210-256)||(6870133-6870179)
chr8 (210-256)||(9736109-9736155)
chr8 (210-256)||(21558761-21558806)
chr8 (210-256)||(33853025-33853070)
chr8 (209-254)||(36251815-36251858)
chr8 (210-256)||(39132733-39132778)
chr8 (210-256)||(40449826-40449871)
chr8 (208-256)||(3178599-3178646)
chr8 (206-254)||(14864968-14865015)
chr8 (208-256)||(17925303-17925350)
chr8 (209-256)||(36469219-36469264)
chr8 (208-256)||(41578141-41578188)
chr8 (209-256)||(3454631-3454677)
chr8 (210-256)||(15602121-15602165)
chr8 (213-256)||(15730501-15730543)
chr8 (210-256)||(29731033-29731077)
chr8 (209-256)||(36507746-36507793)
chr8 (210-256)||(44444809-44444853)
chr8 (210-256)||(25817-25862)
chr8 (210-256)||(4482367-4482412)
chr8 (210-256)||(9114665-9114710)
chr8 (208-254)||(11681639-11681684)
chr8 (210-256)||(15633375-15633420)
chr8 (213-251)||(24028224-24028261)
chr8 (210-256)||(31203870-31203915)
chr8 (211-256)||(37429636-37429679)
chr8 (210-256)||(44672052-44672097)
chr8 (208-253)||(5691562-5691607)
chr8 (208-256)||(11180038-11180084)
chr8 (199-256)||(15207431-15207487)
chr8 (209-256)||(20165950-20165994)
chr8 (207-256)||(24573269-24573317)
chr8 (209-254)||(35124697-35124741)
chr8 (208-256)||(39133338-39133384)
chr8 (207-256)||(39324457-39324505)
chr8 (210-254)||(11680170-11680213)
chr8 (208-256)||(14053186-14053233)
chr8 (96-179)||(27327013-27327097)
chr8 (208-256)||(43285012-43285059)
[»] scaffold0083 (1 HSPs)
scaffold0083 (210-256)||(3225-3271)
[»] scaffold0008 (1 HSPs)
scaffold0008 (207-256)||(239159-239207)
[»] scaffold0945 (1 HSPs)
scaffold0945 (208-256)||(1161-1208)
[»] scaffold0044 (1 HSPs)
scaffold0044 (209-256)||(59711-59756)
[»] scaffold0015 (1 HSPs)
scaffold0015 (200-256)||(42567-42622)
[»] scaffold0060 (1 HSPs)
scaffold0060 (209-256)||(66584-66630)
[»] scaffold1063 (1 HSPs)
scaffold1063 (210-256)||(252-297)
[»] scaffold0096 (2 HSPs)
scaffold0096 (210-256)||(35087-35132)
scaffold0096 (211-256)||(10550-10594)
[»] scaffold0103 (1 HSPs)
scaffold0103 (208-256)||(27625-27672)
[»] scaffold0036 (1 HSPs)
scaffold0036 (208-256)||(12289-12336)
[»] scaffold0001 (1 HSPs)
scaffold0001 (208-256)||(185595-185642)


Alignment Details
Target: chr5 (Bit Score: 44; Significance: 4e-16; HSPs: 45)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 209 - 256
Target Start/End: Complemental strand, 5577483 - 5577436
Alignment:
Q  209 tgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||    
T  5577483 tgagtaaataggcaattaccccccctgaaattgtaagtttcgtcaatt 5577436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 210 - 256
Target Start/End: Complemental strand, 36779304 - 36779258
Alignment:
Q  210 gagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    |||||||||||||||||||||  ||||||||||||||||||||||||    
T  36779304 gagtaaataggcaattacccccactgaaattgtaagtttcgtcaatt 36779258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 208 - 256
Target Start/End: Original strand, 19292225 - 19292272
Alignment:
Q  208 ttgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    |||||||||||| |||||||||||| |||||||||||||||||||||||    
T  19292225 ttgagtaaatagacaattacccctc-tgaaattgtaagtttcgtcaatt 19292272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 209 - 256
Target Start/End: Complemental strand, 25823842 - 25823797
Alignment:
Q  209 tgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    ||||||||||||||||||||  ||||||||||||||||||||||||||    
T  25823842 tgagtaaataggcaattacc--tcctgaaattgtaagtttcgtcaatt 25823797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 209 - 256
Target Start/End: Original strand, 4992892 - 4992938
Alignment:
Q  209 tgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    ||||||||||| |||||||||||| |||||||||||||||||||||||    
T  4992892 tgagtaaatagtcaattacccctc-tgaaattgtaagtttcgtcaatt 4992938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 209 - 256
Target Start/End: Complemental strand, 5790623 - 5790577
Alignment:
Q  209 tgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    ||||||||||| ||||||||| ||||||||||||||||||||||||||    
T  5790623 tgagtaaatagacaattaccc-tcctgaaattgtaagtttcgtcaatt 5790577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 209 - 256
Target Start/End: Original strand, 20730924 - 20730970
Alignment:
Q  209 tgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    ||||||||||||||||||| ||||| ||||||||||||||||||||||    
T  20730924 tgagtaaataggcaattactcctcc-gaaattgtaagtttcgtcaatt 20730970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 210 - 256
Target Start/End: Original strand, 9587508 - 9587553
Alignment:
Q  210 gagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    |||||||||| |||||||||| |||||||||||||||||||||||||    
T  9587508 gagtaaatagacaattacccc-cctgaaattgtaagtttcgtcaatt 9587553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 210 - 256
Target Start/End: Complemental strand, 19293310 - 19293265
Alignment:
Q  210 gagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    ||||||||||||||||||| | |||||||||||||||||||||||||    
T  19293310 gagtaaataggcaattacctc-cctgaaattgtaagtttcgtcaatt 19293265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 210 - 256
Target Start/End: Complemental strand, 39048573 - 39048527
Alignment:
Q  210 gagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    |||||||||| ||||| |||| |||||||||||||||||||||||||    
T  39048573 gagtaaatagtcaatttccccccctgaaattgtaagtttcgtcaatt 39048527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 210 - 256
Target Start/End: Original strand, 41084209 - 41084254
Alignment:
Q  210 gagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    |||||||||| |||||||||| |||||||||||||||||||||||||    
T  41084209 gagtaaatagtcaattacccc-cctgaaattgtaagtttcgtcaatt 41084254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 210 - 256
Target Start/End: Complemental strand, 41210343 - 41210298
Alignment:
Q  210 gagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    |||||||||| |||||||||| |||||||||||||||||||||||||    
T  41210343 gagtaaatagtcaattacccc-cctgaaattgtaagtttcgtcaatt 41210298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 208 - 256
Target Start/End: Original strand, 27187929 - 27187975
Alignment:
Q  208 ttgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    |||||||||||||||||||||  ||| ||||||||||||||||||||||    
T  27187929 ttgagtaaataggcaattacc--tcccgaaattgtaagtttcgtcaatt 27187975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 208 - 256
Target Start/End: Original strand, 6864329 - 6864376
Alignment:
Q  208 ttgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    ||||||||||||||||||| ||||||||||||| |||||||| ||||||    
T  6864329 ttgagtaaataggcaatta-ccctcctgaaattataagtttcatcaatt 6864376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 209 - 256
Target Start/End: Original strand, 5573962 - 5574008
Alignment:
Q  209 tgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    ||||||||||| |||||| ||||| |||||||||||||||||||||||    
T  5573962 tgagtaaatagtcaattatccctc-tgaaattgtaagtttcgtcaatt 5574008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 209 - 256
Target Start/End: Complemental strand, 33159962 - 33159916
Alignment:
Q  209 tgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    ||||||||||| ||||| ||| ||||||||||||||||||||||||||    
T  33159962 tgagtaaatagtcaatttccc-tcctgaaattgtaagtttcgtcaatt 33159916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 210 - 256
Target Start/End: Complemental strand, 38978529 - 38978485
Alignment:
Q  210 gagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    ||||||||| |||||||||||  ||||||||||||||||||||||||    
T  38978529 gagtaaatatgcaattacccc--ctgaaattgtaagtttcgtcaatt 38978485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 210 - 256
Target Start/End: Complemental strand, 1144492 - 1144447
Alignment:
Q  210 gagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    |||||||||| ||| |||||| |||||||||||||||||||||||||    
T  1144492 gagtaaatagtcaactacccc-cctgaaattgtaagtttcgtcaatt 1144447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 210 - 256
Target Start/End: Complemental strand, 5575152 - 5575107
Alignment:
Q  210 gagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    |||||||||| ||||||| || |||||||||||||||||||||||||    
T  5575152 gagtaaatagtcaattactcc-cctgaaattgtaagtttcgtcaatt 5575107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 210 - 256
Target Start/End: Original strand, 5576347 - 5576392
Alignment:
Q  210 gagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    ||||||||||||||||||||||  ||||||||||||||| |||||||    
T  5576347 gagtaaataggcaattacccct-atgaaattgtaagttttgtcaatt 5576392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 210 - 256
Target Start/End: Original strand, 6834483 - 6834528
Alignment:
Q  210 gagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    ||||||||||||||||||| | ||||||||| |||||||||||||||    
T  6834483 gagtaaataggcaattacctc-cctgaaattataagtttcgtcaatt 6834528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 210 - 256
Target Start/End: Original strand, 10622740 - 10622785
Alignment:
Q  210 gagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    |||||||||| ||||| |||||| |||||||||||||||||||||||    
T  10622740 gagtaaatagtcaatttcccctc-tgaaattgtaagtttcgtcaatt 10622785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 210 - 256
Target Start/End: Original strand, 11664953 - 11664998
Alignment:
Q  210 gagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    ||||||||||||||||||||| ||||||||||||| ||| |||||||    
T  11664953 gagtaaataggcaattacccc-cctgaaattgtaaattttgtcaatt 11664998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 211 - 256
Target Start/End: Original strand, 13544558 - 13544601
Alignment:
Q  211 agtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    ||||||||||||||| ||||  ||||||||||||||||||||||||    
T  13544558 agtaaataggcaattgcccc--ctgaaattgtaagtttcgtcaatt 13544601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 208 - 254
Target Start/End: Original strand, 17640351 - 17640396
Alignment:
Q  208 ttgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaa 254  Q
    |||||||||||| |||||||||| ||||||||||||| |||||||||    
T  17640351 ttgagtaaatagtcaattacccc-cctgaaattgtaactttcgtcaa 17640396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 208 - 254
Target Start/End: Original strand, 19897390 - 19897435
Alignment:
Q  208 ttgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaa 254  Q
    |||||||||||| |||||||||| ||||||||||||| |||||||||    
T  19897390 ttgagtaaatagtcaattacccc-cctgaaattgtaactttcgtcaa 19897435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 210 - 256
Target Start/End: Complemental strand, 27188834 - 27188789
Alignment:
Q  210 gagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    |||||||||||||| ||| |||| |||||||||||||||||||||||    
T  27188834 gagtaaataggcaagtactcctc-tgaaattgtaagtttcgtcaatt 27188789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 210 - 256
Target Start/End: Complemental strand, 36499327 - 36499282
Alignment:
Q  210 gagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    |||||||||| ||||| ||| ||||||||||||||||||||||||||    
T  36499327 gagtaaatagtcaatttccc-tcctgaaattgtaagtttcgtcaatt 36499282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 210 - 256
Target Start/End: Complemental strand, 38425066 - 38425021
Alignment:
Q  210 gagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    |||||||||  |||||||||| |||||||||||||||||||||||||    
T  38425066 gagtaaataaacaattacccc-cctgaaattgtaagtttcgtcaatt 38425021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 206 - 256
Target Start/End: Original strand, 39760565 - 39760614
Alignment:
Q  206 atttgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    |||||||||||||| ||||| |||| |||||||||||||||||| ||||||    
T  39760565 atttgagtaaatagtcaatttcccc-cctgaaattgtaagtttcatcaatt 39760614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 211 - 256
Target Start/End: Complemental strand, 6915508 - 6915464
Alignment:
Q  211 agtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    ||||||||| |||||||||  |||||||||||||||||||||||||    
T  6915508 agtaaatagacaattaccca-cctgaaattgtaagtttcgtcaatt 6915464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 207 - 256
Target Start/End: Original strand, 12403556 - 12403604
Alignment:
Q  207 tttgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    ||||||||||||| ||||| |||| |||||||||||||||||| ||||||    
T  12403556 tttgagtaaatagtcaatttcccc-cctgaaattgtaagtttcatcaatt 12403604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 207 - 256
Target Start/End: Complemental strand, 17526938 - 17526890
Alignment:
Q  207 tttgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    ||||||||||||| ||||| |||| |||||||||||||||||| ||||||    
T  17526938 tttgagtaaatagtcaatttcccc-cctgaaattgtaagtttcatcaatt 17526890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 207 - 256
Target Start/End: Original strand, 17647278 - 17647326
Alignment:
Q  207 tttgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    ||||||||||||| |||||| ||| | |||||||||||||||||||||||    
T  17647278 tttgagtaaatagtcaattatccc-cttgaaattgtaagtttcgtcaatt 17647326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 205 - 254
Target Start/End: Complemental strand, 23094858 - 23094810
Alignment:
Q  205 tatttgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaa 254  Q
    ||||||||||||||| |||||||||| | ||||||||||| |||||||||    
T  23094858 tatttgagtaaatagtcaattacccc-cttgaaattgtaactttcgtcaa 23094810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 208 - 256
Target Start/End: Original strand, 26242775 - 26242821
Alignment:
Q  208 ttgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    |||||||||||| |||||||||||  | |||||||||||||||||||||    
T  26242775 ttgagtaaatagacaattacccct--taaaattgtaagtttcgtcaatt 26242821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 208 - 256
Target Start/End: Complemental strand, 26359968 - 26359922
Alignment:
Q  208 ttgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    |||||||||||| ||||||||||  |||||||||||| |||||||||||    
T  26359968 ttgagtaaatagtcaattacccc--ctgaaattgtaattttcgtcaatt 26359922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 211 - 256
Target Start/End: Original strand, 38977559 - 38977603
Alignment:
Q  211 agtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    |||||||||||||||| ||| |||||||||||||||||| ||||||    
T  38977559 agtaaataggcaattatccc-cctgaaattgtaagtttcatcaatt 38977603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 208 - 256
Target Start/End: Complemental strand, 730475 - 730427
Alignment:
Q  208 ttgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    |||| ||||||| ||||| ||||||||||||||||| ||||||| ||||    
T  730475 ttgattaaatagtcaatttcccctcctgaaattgtaggtttcgttaatt 730427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 208 - 256
Target Start/End: Original strand, 8407379 - 8407426
Alignment:
Q  208 ttgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    |||||||||||| ||||| |||||| |||||||||||||||| ||||||    
T  8407379 ttgagtaaatagtcaatttcccctc-tgaaattgtaagtttcatcaatt 8407426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 208 - 256
Target Start/End: Complemental strand, 11445940 - 11445893
Alignment:
Q  208 ttgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    |||||||||||| ||||| |||| |||||||||||||||||| ||||||    
T  11445940 ttgagtaaatagtcaatttcccc-cctgaaattgtaagtttcatcaatt 11445893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 210 - 254
Target Start/End: Complemental strand, 17641830 - 17641787
Alignment:
Q  210 gagtaaataggcaattacccctcctgaaattgtaagtttcgtcaa 254  Q
    |||||||||| |||||||||| ||||||||||||| |||||||||    
T  17641830 gagtaaatagtcaattacccc-cctgaaattgtaactttcgtcaa 17641787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 208 - 256
Target Start/End: Original strand, 21639909 - 21639956
Alignment:
Q  208 ttgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    |||||||||||| ||||| |||| |||||||||||||||||| ||||||    
T  21639909 ttgagtaaatagtcaatttcccc-cctgaaattgtaagtttcatcaatt 21639956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 210 - 254
Target Start/End: Original strand, 23093239 - 23093282
Alignment:
Q  210 gagtaaataggcaattacccctcctgaaattgtaagtttcgtcaa 254  Q
    |||||||||| |||||||||| ||||||||||||| |||||||||    
T  23093239 gagtaaatagtcaattacccc-cctgaaattgtaactttcgtcaa 23093282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 205 - 249
Target Start/End: Complemental strand, 38396258 - 38396215
Alignment:
Q  205 tatttgagtaaataggcaattacccctcctgaaattgtaagtttc 249  Q
    ||||||||||||||| ||||| |||| ||||||||||||||||||    
T  38396258 tatttgagtaaatagtcaatttcccc-cctgaaattgtaagtttc 38396215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 29)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 207 - 256
Target Start/End: Original strand, 12138479 - 12138528
Alignment:
Q  207 tttgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    |||||||||||||||||||||||| |||||||||||||||||| ||||||    
T  12138479 tttgagtaaataggcaattaccccccctgaaattgtaagtttcatcaatt 12138528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 208 - 256
Target Start/End: Complemental strand, 44748089 - 44748041
Alignment:
Q  208 ttgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    ||||||||||||||||||||||| | |||||||||||||||||||||||    
T  44748089 ttgagtaaataggcaattaccccccttgaaattgtaagtttcgtcaatt 44748041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 209 - 256
Target Start/End: Original strand, 1090542 - 1090589
Alignment:
Q  209 tgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    |||||||||||||||| ||||| |||||||||||||||||||||||||    
T  1090542 tgagtaaataggcaatgaccccccctgaaattgtaagtttcgtcaatt 1090589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 209 - 256
Target Start/End: Original strand, 6924104 - 6924151
Alignment:
Q  209 tgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    ||||||||||||||| |||||| |||||||||||||||||||||||||    
T  6924104 tgagtaaataggcaactaccccccctgaaattgtaagtttcgtcaatt 6924151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 208 - 256
Target Start/End: Original strand, 17815460 - 17815507
Alignment:
Q  208 ttgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    |||||||||||| |||||||||| |||||||||||||||||||||||||    
T  17815460 ttgagtaaatagtcaattacccc-cctgaaattgtaagtttcgtcaatt 17815507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 208 - 256
Target Start/End: Complemental strand, 34926160 - 34926113
Alignment:
Q  208 ttgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    |||||||||||||||||||||| || |||||||||||||||||||||||    
T  34926160 ttgagtaaataggcaattaccc-tcttgaaattgtaagtttcgtcaatt 34926113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 209 - 256
Target Start/End: Original strand, 3106147 - 3106193
Alignment:
Q  209 tgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    ||||||||||||||||||||||| ||||||||||||||||| ||||||    
T  3106147 tgagtaaataggcaattacccct-ctgaaattgtaagtttcatcaatt 3106193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 210 - 256
Target Start/End: Complemental strand, 3364151 - 3364107
Alignment:
Q  210 gagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    |||||||||||||||||||  ||||||||||||||||||||||||||    
T  3364151 gagtaaataggcaattacc--tcctgaaattgtaagtttcgtcaatt 3364107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 209 - 256
Target Start/End: Original strand, 28780080 - 28780126
Alignment:
Q  209 tgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    ||||||||||||||| |||||| |||||||||||||||||||||||||    
T  28780080 tgagtaaataggcaactacccc-cctgaaattgtaagtttcgtcaatt 28780126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 210 - 256
Target Start/End: Original strand, 9758284 - 9758329
Alignment:
Q  210 gagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    |||||||||| |||||||||| |||||||||||||||||||||||||    
T  9758284 gagtaaatagacaattacccc-cctgaaattgtaagtttcgtcaatt 9758329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 207 - 256
Target Start/End: Complemental strand, 17816328 - 17816281
Alignment:
Q  207 tttgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    ||||||||||||| ||||||||||  ||||||||||||||||||||||||    
T  17816328 tttgagtaaatagtcaattacccc--ctgaaattgtaagtttcgtcaatt 17816281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 208 - 256
Target Start/End: Complemental strand, 2695961 - 2695914
Alignment:
Q  208 ttgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    ||||||||||||||||||||||| | ||||||||||||||| |||||||    
T  2695961 ttgagtaaataggcaattacccc-catgaaattgtaagttttgtcaatt 2695914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 212 - 256
Target Start/End: Original strand, 18736637 - 18736680
Alignment:
Q  212 gtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    |||||||||||||||| | ||||||||||||||||||||||||||    
T  18736637 gtaaataggcaattactc-tcctgaaattgtaagtttcgtcaatt 18736680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 209 - 256
Target Start/End: Complemental strand, 5439153 - 5439107
Alignment:
Q  209 tgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    ||||||||||| ||||| |||| |||||||||||||||||||||||||    
T  5439153 tgagtaaatagtcaatttcccc-cctgaaattgtaagtttcgtcaatt 5439107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 210 - 256
Target Start/End: Complemental strand, 6731501 - 6731457
Alignment:
Q  210 gagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    ||||||||||||||||||| |  ||||||||||||||||||||||||    
T  6731501 gagtaaataggcaattaccac--ctgaaattgtaagtttcgtcaatt 6731457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 209 - 256
Target Start/End: Original strand, 7277799 - 7277845
Alignment:
Q  209 tgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    |||||||||||||||||| || |||| |||||||||||||||||||||    
T  7277799 tgagtaaataggcaattaacc-tcctaaaattgtaagtttcgtcaatt 7277845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 209 - 256
Target Start/End: Original strand, 9707866 - 9707912
Alignment:
Q  209 tgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    ||||||||||| |||||||||| |||||||||||||||||| ||||||    
T  9707866 tgagtaaatagtcaattacccc-cctgaaattgtaagtttcatcaatt 9707912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 209 - 256
Target Start/End: Original strand, 10315197 - 10315243
Alignment:
Q  209 tgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    |||||||||||||||||| |||||||| ||||||||||||| ||||||    
T  10315197 tgagtaaataggcaatta-ccctcctggaattgtaagtttcatcaatt 10315243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 210 - 256
Target Start/End: Complemental strand, 11871482 - 11871438
Alignment:
Q  210 gagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    |||||||||||||||||||||  |||||||||| |||||||||||||    
T  11871482 gagtaaataggcaattacccc--ctgaaattgttagtttcgtcaatt 11871438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 210 - 256
Target Start/End: Original strand, 15829909 - 15829953
Alignment:
Q  210 gagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    |||||||||| ||||||||||  ||||||||||||||||||||||||    
T  15829909 gagtaaatagacaattacccc--ctgaaattgtaagtttcgtcaatt 15829953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 210 - 256
Target Start/End: Complemental strand, 15831038 - 15830994
Alignment:
Q  210 gagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    |||||||||| ||||||||||  ||||||||||||||||||||||||    
T  15831038 gagtaaatagtcaattacccc--ctgaaattgtaagtttcgtcaatt 15830994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 210 - 256
Target Start/End: Original strand, 39939276 - 39939320
Alignment:
Q  210 gagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    ||||||||||||||||||||  ||||||||||||||||| |||||||    
T  39939276 gagtaaataggcaattaccc--cctgaaattgtaagttttgtcaatt 39939320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 206 - 256
Target Start/End: Original strand, 6730406 - 6730455
Alignment:
Q  206 atttgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    ||||||||||||||||||||||| || |||||||||||| ||||| |||||    
T  6730406 atttgagtaaataggcaattacctct-ctgaaattgtaaatttcgccaatt 6730455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 211 - 256
Target Start/End: Complemental strand, 4647145 - 4647101
Alignment:
Q  211 agtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    |||||||||||||||| ||| ||||||||| |||||||||||||||    
T  4647145 agtaaataggcaattatccc-cctgaaattataagtttcgtcaatt 4647101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 211 - 256
Target Start/End: Complemental strand, 7275725 - 7275681
Alignment:
Q  211 agtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    ||||||| ||||||||||| ||||||||||| ||||||||||||||    
T  7275725 agtaaatgggcaattaccc-tcctgaaattggaagtttcgtcaatt 7275681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 207 - 256
Target Start/End: Original strand, 18059472 - 18059520
Alignment:
Q  207 tttgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    ||||||||||||| || || |||||| |||||||||||||||||||||||    
T  18059472 tttgagtaaatagtcattttcccctc-tgaaattgtaagtttcgtcaatt 18059520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 208 - 256
Target Start/End: Original strand, 38935719 - 38935765
Alignment:
Q  208 ttgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    ||||||||||||||| ||||| ||  |||||||||||||||||||||||    
T  38935719 ttgagtaaataggcagttacctct--tgaaattgtaagtttcgtcaatt 38935765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 207 - 256
Target Start/End: Complemental strand, 41287525 - 41287477
Alignment:
Q  207 tttgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    ||||||||||||| ||||| | || |||||||||||||||||||||||||    
T  41287525 tttgagtaaatagtcaatttctcc-cctgaaattgtaagtttcgtcaatt 41287477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 208 - 256
Target Start/End: Complemental strand, 45160448 - 45160401
Alignment:
Q  208 ttgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    |||||||||||  ||||| |||||| |||||||||||||||||||||||    
T  45160448 ttgagtaaataatcaatttcccctc-tgaaattgtaagtttcgtcaatt 45160401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 73)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 199 - 256
Target Start/End: Complemental strand, 22389307 - 22389250
Alignment:
Q  199 tattagtatttgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    |||||| |||||||||||||  |||||||||||||||||||| |||||||||||||||    
T  22389307 tattagaatttgagtaaataaacaattacccctcctgaaattataagtttcgtcaatt 22389250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 210 - 256
Target Start/End: Original strand, 44209101 - 44209146
Alignment:
Q  210 gagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||    
T  44209101 gagtaaataggcaattacccc-cctgaaattgtaagtttcgtcaatt 44209146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 209 - 256
Target Start/End: Complemental strand, 6918888 - 6918843
Alignment:
Q  209 tgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    ||||||||||||||||||||||  ||||||||||||||||||||||||    
T  6918888 tgagtaaataggcaattacccc--ctgaaattgtaagtttcgtcaatt 6918843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 208 - 256
Target Start/End: Original strand, 16834363 - 16834410
Alignment:
Q  208 ttgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    |||||||||||| |||||||||| |||||||||||||||||||||||||    
T  16834363 ttgagtaaatagtcaattacccc-cctgaaattgtaagtttcgtcaatt 16834410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 208 - 256
Target Start/End: Original strand, 38787530 - 38787577
Alignment:
Q  208 ttgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    ||||||||||||||||||||||| |||||||||||||||||| ||||||    
T  38787530 ttgagtaaataggcaattacccc-cctgaaattgtaagtttcatcaatt 38787577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 208 - 256
Target Start/End: Original strand, 46294435 - 46294482
Alignment:
Q  208 ttgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    |||||||||||| |||||||||| |||||||||||||||||||||||||    
T  46294435 ttgagtaaatagtcaattacccc-cctgaaattgtaagtttcgtcaatt 46294482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 209 - 256
Target Start/End: Original strand, 18806630 - 18806676
Alignment:
Q  209 tgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    |||||||||||||||||| || ||||||||||||||||||||||||||    
T  18806630 tgagtaaataggcaattatcc-tcctgaaattgtaagtttcgtcaatt 18806676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 209 - 256
Target Start/End: Complemental strand, 48804035 - 48803988
Alignment:
Q  209 tgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    ||||||||||| ||||||||||  ||||||||||||||||||||||||    
T  48804035 tgagtaaatagtcaattaccccctctgaaattgtaagtttcgtcaatt 48803988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 209 - 256
Target Start/End: Original strand, 52869657 - 52869703
Alignment:
Q  209 tgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    ||||||||||| |||||||||| |||||||||||||||||||||||||    
T  52869657 tgagtaaatagtcaattacccc-cctgaaattgtaagtttcgtcaatt 52869703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 207 - 256
Target Start/End: Original strand, 1798762 - 1798809
Alignment:
Q  207 tttgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    ||||||||||||| ||||||||||  ||||||||||||||||||||||||    
T  1798762 tttgagtaaatagtcaattacccc--ctgaaattgtaagtttcgtcaatt 1798809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 210 - 256
Target Start/End: Complemental strand, 13698427 - 13698381
Alignment:
Q  210 gagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    ||||||||| ||||||| |||||||||||||||||||||||| ||||    
T  13698427 gagtaaatatgcaattatccctcctgaaattgtaagtttcgttaatt 13698381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 210 - 256
Target Start/End: Complemental strand, 16798349 - 16798304
Alignment:
Q  210 gagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    |||||||||||||||| ||| ||||||||||||||||||||||||||    
T  16798349 gagtaaataggcaattgccc-tcctgaaattgtaagtttcgtcaatt 16798304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 210 - 256
Target Start/End: Complemental strand, 24253214 - 24253169
Alignment:
Q  210 gagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    |||||||||| |||||||||| |||||||||||||||||||||||||    
T  24253214 gagtaaatagtcaattacccc-cctgaaattgtaagtttcgtcaatt 24253169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 210 - 256
Target Start/End: Original strand, 31675384 - 31675429
Alignment:
Q  210 gagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    ||||||||||||||||||||| |||||||||||||||||| ||||||    
T  31675384 gagtaaataggcaattacccc-cctgaaattgtaagtttcatcaatt 31675429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 210 - 256
Target Start/End: Complemental strand, 31676519 - 31676474
Alignment:
Q  210 gagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    ||||||||||||||||||||| | |||||||||||||||||||||||    
T  31676519 gagtaaataggcaattacccc-cttgaaattgtaagtttcgtcaatt 31676474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 210 - 256
Target Start/End: Complemental strand, 40315683 - 40315638
Alignment:
Q  210 gagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    |||||||||||||||||||| |||||||||||||||||| |||||||    
T  40315683 gagtaaataggcaattaccc-tcctgaaattgtaagttttgtcaatt 40315638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 210 - 256
Target Start/End: Original strand, 43281174 - 43281219
Alignment:
Q  210 gagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    |||||||||||||||||||| || |||||||||||||||||||||||    
T  43281174 gagtaaataggcaattacccttc-tgaaattgtaagtttcgtcaatt 43281219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 210 - 256
Target Start/End: Complemental strand, 44397642 - 44397597
Alignment:
Q  210 gagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    ||||||||| ||||||||||| |||||||||||||||||||||||||    
T  44397642 gagtaaataagcaattacccc-cctgaaattgtaagtttcgtcaatt 44397597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 210 - 256
Target Start/End: Original strand, 44431180 - 44431225
Alignment:
Q  210 gagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    |||||||||| |||||||||| |||||||||||||||||||||||||    
T  44431180 gagtaaatagtcaattacccc-cctgaaattgtaagtttcgtcaatt 44431225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 210 - 256
Target Start/End: Original strand, 45141467 - 45141512
Alignment:
Q  210 gagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    ||||||||||||||||||||| | |||||||||||||||||||||||    
T  45141467 gagtaaataggcaattacccc-cgtgaaattgtaagtttcgtcaatt 45141512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 211 - 256
Target Start/End: Original strand, 11201899 - 11201943
Alignment:
Q  211 agtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    ||||||||| |||||||||| |||||||||||||||||||||||||    
T  11201899 agtaaatagtcaattacccc-cctgaaattgtaagtttcgtcaatt 11201943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 208 - 256
Target Start/End: Complemental strand, 27235268 - 27235222
Alignment:
Q  208 ttgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    ||||||||||||||||||||||  |||||||||||||| ||||||||||    
T  27235268 ttgagtaaataggcaattaccc--cctgaaattgtaaggttcgtcaatt 27235222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 207 - 256
Target Start/End: Complemental strand, 29488020 - 29487972
Alignment:
Q  207 tttgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    ||||||||||||||||||||| | ||||||||||| ||||||||||||||    
T  29488020 tttgagtaaataggcaattactc-tcctgaaattgcaagtttcgtcaatt 29487972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 210 - 256
Target Start/End: Original strand, 13697589 - 13697632
Alignment:
Q  210 gagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    ||||||||||||||||||||||   ||||||||||||||||||||||    
T  13697589 gagtaaataggcaattacccct---gaaattgtaagtttcgtcaatt 13697632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 209 - 256
Target Start/End: Complemental strand, 18542373 - 18542328
Alignment:
Q  209 tgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    |||||||||||||||||||||  ||| |||||||||||||||||||||    
T  18542373 tgagtaaataggcaattaccc--cctaaaattgtaagtttcgtcaatt 18542328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 209 - 256
Target Start/End: Complemental strand, 18807756 - 18807711
Alignment:
Q  209 tgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    |||||||||||||||||||||  ||||||||||||||||| |||||||    
T  18807756 tgagtaaataggcaattaccc--cctgaaattgtaagttttgtcaatt 18807711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 209 - 256
Target Start/End: Complemental strand, 30754089 - 30754044
Alignment:
Q  209 tgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    |||||||||||| |||||||  ||||||||||||||||||||||||||    
T  30754089 tgagtaaataggtaattacc--tcctgaaattgtaagtttcgtcaatt 30754044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 208 - 256
Target Start/End: Complemental strand, 36305166 - 36305119
Alignment:
Q  208 ttgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    ||||||||||||||||||| ||||| ||||||||||||||| |||||||    
T  36305166 ttgagtaaataggcaatta-ccctcttgaaattgtaagttttgtcaatt 36305119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 208 - 256
Target Start/End: Complemental strand, 44210178 - 44210131
Alignment:
Q  208 ttgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    ||||||||||||||||||| ||||| ||||||||||||||| |||||||    
T  44210178 ttgagtaaataggcaatta-ccctcatgaaattgtaagttttgtcaatt 44210131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 209 - 256
Target Start/End: Complemental strand, 1799862 - 1799816
Alignment:
Q  209 tgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    ||||||||||| |||||||||| | |||||||||||||||||||||||    
T  1799862 tgagtaaatagtcaattacccc-cttgaaattgtaagtttcgtcaatt 1799816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 209 - 256
Target Start/End: Original strand, 6783127 - 6783173
Alignment:
Q  209 tgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    ||||||||||| |||||||||| |||||||||||| ||||||||||||    
T  6783127 tgagtaaatagtcaattacccc-cctgaaattgtatgtttcgtcaatt 6783173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 210 - 256
Target Start/End: Original strand, 28296550 - 28296594
Alignment:
Q  210 gagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    |||||||||| |||||||||||  |||||||||||||||||||||||    
T  28296550 gagtaaatagtcaattacccct--tgaaattgtaagtttcgtcaatt 28296594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 206 - 256
Target Start/End: Original strand, 32073696 - 32073744
Alignment:
Q  206 atttgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    |||||| |||||||||||||||||  ||| |||||||||||||||||||||    
T  32073696 atttgattaaataggcaattaccc--cctaaaattgtaagtttcgtcaatt 32073744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 210 - 256
Target Start/End: Original strand, 38064759 - 38064805
Alignment:
Q  210 gagtaaatag-gcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    |||||||||| ||||||||||||| |||||||||||||||||||||||    
T  38064759 gagtaaatagagcaattacccctc-tgaaattgtaagtttcgtcaatt 38064805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 210 - 256
Target Start/End: Original strand, 43759553 - 43759597
Alignment:
Q  210 gagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    ||||||||||||||||||||  ||| |||||||||||||||||||||    
T  43759553 gagtaaataggcaattaccc--cctcaaattgtaagtttcgtcaatt 43759597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 210 - 256
Target Start/End: Complemental strand, 44432373 - 44432329
Alignment:
Q  210 gagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    |||||||||| ||||||||||  ||||||||||||||||||||||||    
T  44432373 gagtaaatagtcaattacccc--ctgaaattgtaagtttcgtcaatt 44432329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 210 - 256
Target Start/End: Complemental strand, 48721612 - 48721568
Alignment:
Q  210 gagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    |||||||||| ||||||||||  ||||||||||||||||||||||||    
T  48721612 gagtaaatagtcaattacccc--ctgaaattgtaagtttcgtcaatt 48721568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 210 - 256
Target Start/End: Original strand, 8896920 - 8896965
Alignment:
Q  210 gagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    |||||||||| ||||||||| |||| |||||||||||||||||||||    
T  8896920 gagtaaatagtcaattaccc-tcctaaaattgtaagtttcgtcaatt 8896965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 210 - 256
Target Start/End: Original strand, 11706720 - 11706765
Alignment:
Q  210 gagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    |||||||||| ||||| |||||| |||||||||||||||||||||||    
T  11706720 gagtaaatagtcaatttcccctc-tgaaattgtaagtttcgtcaatt 11706765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 210 - 256
Target Start/End: Original strand, 22388364 - 22388409
Alignment:
Q  210 gagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    |||||||||| ||||||| || |||||||||||||||||||||||||    
T  22388364 gagtaaatagacaattacacc-cctgaaattgtaagtttcgtcaatt 22388409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 210 - 256
Target Start/End: Original strand, 24250408 - 24250453
Alignment:
Q  210 gagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    |||||||||| |||||| ||| |||||||||||||||||||||||||    
T  24250408 gagtaaatagtcaattatccc-cctgaaattgtaagtttcgtcaatt 24250453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 207 - 256
Target Start/End: Complemental strand, 24480563 - 24480516
Alignment:
Q  207 tttgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    ||||||||||||| ||||| ||||  ||||||||||||||||||||||||    
T  24480563 tttgagtaaatagtcaatttcccc--ctgaaattgtaagtttcgtcaatt 24480516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 210 - 256
Target Start/End: Complemental strand, 26615905 - 26615860
Alignment:
Q  210 gagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    |||||||||||||||||||| || |||||||||||||||||| ||||    
T  26615905 gagtaaataggcaattacccttc-tgaaattgtaagtttcgtgaatt 26615860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 210 - 256
Target Start/End: Original strand, 27234232 - 27234277
Alignment:
Q  210 gagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    |||||||| |||||||| ||| |||||||||||||||||||||||||    
T  27234232 gagtaaatcggcaattatccc-cctgaaattgtaagtttcgtcaatt 27234277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 214 - 256
Target Start/End: Original strand, 29487290 - 29487331
Alignment:
Q  214 aaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    |||||| ||||||||| ||||||||||||||||||||||||||    
T  29487290 aaatagacaattaccc-tcctgaaattgtaagtttcgtcaatt 29487331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 211 - 256
Target Start/End: Original strand, 32186066 - 32186109
Alignment:
Q  211 agtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    ||||||||||||||||||||  ||||||||||||||||| ||||||    
T  32186066 agtaaataggcaattacccc--ctgaaattgtaagtttcatcaatt 32186109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 210 - 256
Target Start/End: Complemental strand, 32815180 - 32815135
Alignment:
Q  210 gagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    |||||||||| ||||||||  ||||||||||||||||||||||||||    
T  32815180 gagtaaatagacaattacca-tcctgaaattgtaagtttcgtcaatt 32815135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 210 - 256
Target Start/End: Complemental strand, 34557990 - 34557945
Alignment:
Q  210 gagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    ||||||||||||||||| ||| | |||||||||||||||||||||||    
T  34557990 gagtaaataggcaattatccc-cttgaaattgtaagtttcgtcaatt 34557945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 210 - 256
Target Start/End: Complemental strand, 40117054 - 40117009
Alignment:
Q  210 gagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    ||||||||||||||||||||| | |||||||||||||||||| ||||    
T  40117054 gagtaaataggcaattacccc-cttgaaattgtaagtttcgttaatt 40117009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 210 - 256
Target Start/End: Complemental strand, 49217104 - 49217060
Alignment:
Q  210 gagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    |||||||||||||||| |||||| |||||||||||||||||||||||    
T  49217104 gagtaaataggcaatt-cccctc-tgaaattgtaagtttcgtcaatt 49217060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 210 - 256
Target Start/End: Complemental strand, 50938574 - 50938528
Alignment:
Q  210 gagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    |||||||||| ||||| |||| ||||||||||||||||| |||||||    
T  50938574 gagtaaatagacaatttccccccctgaaattgtaagttttgtcaatt 50938528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 210 - 256
Target Start/End: Complemental strand, 52360426 - 52360381
Alignment:
Q  210 gagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    |||||||||||||||||||||  ||||||||||||||||| ||||||    
T  52360426 gagtaaataggcaattacccc-actgaaattgtaagtttcatcaatt 52360381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 207 - 256
Target Start/End: Original strand, 8741722 - 8741770
Alignment:
Q  207 tttgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    ||||||||||||| ||||| |||| | |||||||||||||||||||||||    
T  8741722 tttgagtaaatagtcaatttcccc-cttgaaattgtaagtttcgtcaatt 8741770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 209 - 254
Target Start/End: Complemental strand, 11343470 - 11343426
Alignment:
Q  209 tgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaa 254  Q
    ||||||||||| |||||||||| ||||||||||||| |||||||||    
T  11343470 tgagtaaatagtcaattacccc-cctgaaattgtaactttcgtcaa 11343426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 209 - 254
Target Start/End: Complemental strand, 11501490 - 11501446
Alignment:
Q  209 tgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaa 254  Q
    ||||||||||| |||||||||| ||||||||||||| |||||||||    
T  11501490 tgagtaaatagtcaattacccc-cctgaaattgtaactttcgtcaa 11501446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 209 - 254
Target Start/End: Original strand, 14282779 - 14282823
Alignment:
Q  209 tgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaa 254  Q
    ||||||||||| |||||||||| ||||||||||||| |||||||||    
T  14282779 tgagtaaatagtcaattacccc-cctgaaattgtaactttcgtcaa 14282823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 209 - 254
Target Start/End: Complemental strand, 14284309 - 14284265
Alignment:
Q  209 tgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaa 254  Q
    ||||||||||| |||||||||| ||||||||||||| |||||||||    
T  14284309 tgagtaaatagtcaattacccc-cctgaaattgtaactttcgtcaa 14284265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 207 - 256
Target Start/End: Complemental strand, 29330171 - 29330123
Alignment:
Q  207 tttgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    ||||||||||||| ||||| |||| |||||||||||||||||| ||||||    
T  29330171 tttgagtaaatagtcaatttcccc-cctgaaattgtaagtttcatcaatt 29330123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 208 - 256
Target Start/End: Complemental strand, 38788656 - 38788610
Alignment:
Q  208 ttgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    ||||||||| |||||||||||||   |||||||||||||||||||||||    
T  38788656 ttgagtaaacaggcaattacccca--tgaaattgtaagtttcgtcaatt 38788610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 208 - 256
Target Start/End: Original strand, 40314469 - 40314515
Alignment:
Q  208 ttgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    |||||||||||| |||||||||||  |||||||||| ||||||||||||    
T  40314469 ttgagtaaatagacaattacccct--tgaaattgtaggtttcgtcaatt 40314515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 211 - 256
Target Start/End: Original strand, 42413103 - 42413147
Alignment:
Q  211 agtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    |||||||||||||||| |  ||||||||||||||||||||||||||    
T  42413103 agtaaataggcaattatct-tcctgaaattgtaagtttcgtcaatt 42413147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 211 - 256
Target Start/End: Original strand, 48803362 - 48803407
Alignment:
Q  211 agtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    ||||||||| |||||| |||  ||||||||||||||||||||||||    
T  48803362 agtaaatagtcaattatcccctctgaaattgtaagtttcgtcaatt 48803407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 207 - 254
Target Start/End: Complemental strand, 4564268 - 4564223
Alignment:
Q  207 tttgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaa 254  Q
    ||||||||||||| |||||||||||  ||||||||||| |||||||||    
T  4564268 tttgagtaaatagtcaattacccct--tgaaattgtaactttcgtcaa 4564223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 209 - 256
Target Start/End: Original strand, 6917145 - 6917190
Alignment:
Q  209 tgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    ||||||||||| |||||| |||  ||||||||||||||||||||||||    
T  6917145 tgagtaaatagacaattatccc--ctgaaattgtaagtttcgtcaatt 6917190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 210 - 254
Target Start/End: Original strand, 11341969 - 11342012
Alignment:
Q  210 gagtaaataggcaattacccctcctgaaattgtaagtttcgtcaa 254  Q
    |||||||||| ||||||||||| |||||||||||| |||||||||    
T  11341969 gagtaaatagtcaattacccct-ctgaaattgtaactttcgtcaa 11342012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 210 - 254
Target Start/End: Original strand, 11499988 - 11500031
Alignment:
Q  210 gagtaaataggcaattacccctcctgaaattgtaagtttcgtcaa 254  Q
    |||||||||| ||||||||||| |||||||||||| |||||||||    
T  11499988 gagtaaatagtcaattacccct-ctgaaattgtaactttcgtcaa 11500031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 208 - 256
Target Start/End: Original strand, 29329288 - 29329335
Alignment:
Q  208 ttgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    |||||||||||| ||||| |||| |||||||||||||||||| ||||||    
T  29329288 ttgagtaaatagtcaatttcccc-cctgaaattgtaagtttcatcaatt 29329335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 210 - 256
Target Start/End: Original strand, 29357358 - 29357401
Alignment:
Q  210 gagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    |||||||||||||||||||   ||| |||||||||||||||||||||    
T  29357358 gagtaaataggcaattacc---cctaaaattgtaagtttcgtcaatt 29357401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 228 - 256
Target Start/End: Original strand, 36723301 - 36723329
Alignment:
Q  228 ccctcctgaaattgtaagtttcgtcaatt 256  Q
    |||||||||||||||||||||||||||||    
T  36723301 ccctcctgaaattgtaagtttcgtcaatt 36723329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 210 - 254
Target Start/End: Complemental strand, 42813910 - 42813867
Alignment:
Q  210 gagtaaataggcaattacccctcctgaaattgtaagtttcgtcaa 254  Q
    |||||||||| ||||||||||| |||||||||||| |||||||||    
T  42813910 gagtaaatagtcaattacccct-ctgaaattgtaactttcgtcaa 42813867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 209 - 256
Target Start/End: Original strand, 44396465 - 44396510
Alignment:
Q  209 tgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    |||||||||||||||||||||  | |||||||||||||||| ||||||    
T  44396465 tgagtaaataggcaattaccc--catgaaattgtaagtttcatcaatt 44396510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 205 - 256
Target Start/End: Complemental strand, 50643712 - 50643663
Alignment:
Q  205 tatttgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    ||||||||||||||||||||||| |   |||||||||||||||| |||||||    
T  50643712 tatttgagtaaataggcaattacgc--tctgaaattgtaagttttgtcaatt 50643663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 213 - 256
Target Start/End: Complemental strand, 51001093 - 51001052
Alignment:
Q  213 taaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    |||||||||||||| |||  ||||||||||||||||||||||||    
T  51001093 taaataggcaattatccc--ctgaaattgtaagtttcgtcaatt 51001052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 3)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 205 - 256
Target Start/End: Complemental strand, 95099 - 95049
Alignment:
Q  205 tatttgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    ||||||||||||||| |||||||||| |||||||||||||||||||||||||    
T  95099 tatttgagtaaatagtcaattacccc-cctgaaattgtaagtttcgtcaatt 95049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 210 - 256
Target Start/End: Complemental strand, 104595 - 104550
Alignment:
Q  210 gagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    |||||||||| ||||| ||||||||||||||||||||||| ||||||    
T  104595 gagtaaatagtcaatt-cccctcctgaaattgtaagtttcatcaatt 104550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 208 - 256
Target Start/End: Original strand, 94244 - 94291
Alignment:
Q  208 ttgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    |||||||||||| |||||| ||| |||||||||||||||||| ||||||    
T  94244 ttgagtaaatagtcaattatccc-cctgaaattgtaagtttcatcaatt 94291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 51)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 209 - 256
Target Start/End: Original strand, 11455416 - 11455462
Alignment:
Q  209 tgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||    
T  11455416 tgagtaaataggcaattaccc-tcctgaaattgtaagtttcgtcaatt 11455462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 209 - 256
Target Start/End: Original strand, 29417150 - 29417196
Alignment:
Q  209 tgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||    
T  29417150 tgagtaaataggcaattacccc-cctgaaattgtaagtttcgtcaatt 29417196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 205 - 256
Target Start/End: Complemental strand, 48611391 - 48611341
Alignment:
Q  205 tatttgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    |||||||||||||||| |||||||| ||||||||||||||||||||||||||    
T  48611391 tatttgagtaaataggtaattaccc-tcctgaaattgtaagtttcgtcaatt 48611341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 210 - 256
Target Start/End: Original strand, 17774288 - 17774333
Alignment:
Q  210 gagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||    
T  17774288 gagtaaataggcaattacccc-cctgaaattgtaagtttcgtcaatt 17774333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 210 - 256
Target Start/End: Complemental strand, 21125750 - 21125705
Alignment:
Q  210 gagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||    
T  21125750 gagtaaataggcaattacccc-cctgaaattgtaagtttcgtcaatt 21125705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 210 - 256
Target Start/End: Original strand, 45856484 - 45856529
Alignment:
Q  210 gagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||    
T  45856484 gagtaaataggcaattacccctcc-gaaattgtaagtttcgtcaatt 45856529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 207 - 256
Target Start/End: Complemental strand, 29418239 - 29418191
Alignment:
Q  207 tttgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    |||||||||||||||||||| ||| |||||||||||||||||||||||||    
T  29418239 tttgagtaaataggcaattatccc-cctgaaattgtaagtttcgtcaatt 29418191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 198 - 254
Target Start/End: Original strand, 31285457 - 31285513
Alignment:
Q  198 ttattagtatttgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaa 254  Q
    |||||| |||| |||||||||| |||||||||| ||||||||||||| |||||||||    
T  31285457 ttattattattagagtaaatagtcaattaccccccctgaaattgtaactttcgtcaa 31285513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 209 - 256
Target Start/End: Original strand, 45258918 - 45258963
Alignment:
Q  209 tgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    ||||||||||||||||||||||  ||||||||||||||||||||||||    
T  45258918 tgagtaaataggcaattacccc--ctgaaattgtaagtttcgtcaatt 45258963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 210 - 256
Target Start/End: Original strand, 22021769 - 22021813
Alignment:
Q  210 gagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    |||||||||||||||||||||  ||||||||||||||||||||||||    
T  22021769 gagtaaataggcaattacccc--ctgaaattgtaagtttcgtcaatt 22021813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 210 - 256
Target Start/End: Complemental strand, 33228679 - 33228635
Alignment:
Q  210 gagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    |||||||||||||||||||||  ||||||||||||||||||||||||    
T  33228679 gagtaaataggcaattacccc--ctgaaattgtaagtttcgtcaatt 33228635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 209 - 255
Target Start/End: Original strand, 26928070 - 26928115
Alignment:
Q  209 tgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaat 255  Q
    ||||||||||| |||||||||| ||||||||||||||||||||||||    
T  26928070 tgagtaaatagtcaattacccc-cctgaaattgtaagtttcgtcaat 26928115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 210 - 256
Target Start/End: Complemental strand, 33697444 - 33697399
Alignment:
Q  210 gagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    |||||||||||||||||| || |||||||||||||||||||||||||    
T  33697444 gagtaaataggcaattactcc-cctgaaattgtaagtttcgtcaatt 33697399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 210 - 256
Target Start/End: Original strand, 34955642 - 34955687
Alignment:
Q  210 gagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    |||||||||||||||||||| ||||||||||| ||||||||||||||    
T  34955642 gagtaaataggcaattaccc-tcctgaaattgcaagtttcgtcaatt 34955687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 210 - 256
Target Start/End: Complemental strand, 44472926 - 44472881
Alignment:
Q  210 gagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    |||||||||||||||||||| ||| ||||||||||||||||||||||    
T  44472926 gagtaaataggcaattaccc-tccagaaattgtaagtttcgtcaatt 44472881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 207 - 256
Target Start/End: Complemental strand, 35499452 - 35499404
Alignment:
Q  207 tttgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    ||||||||||||| ||||||| |||| |||||||||||||||||||||||    
T  35499452 tttgagtaaatagtcaattactcctc-tgaaattgtaagtttcgtcaatt 35499404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 208 - 256
Target Start/End: Complemental strand, 15753418 - 15753371
Alignment:
Q  208 ttgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    ||||||||||||||||||| ||||||| |||||||||||||||| ||||    
T  15753418 ttgagtaaataggcaatta-ccctcctaaaattgtaagtttcgttaatt 15753371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 209 - 256
Target Start/End: Complemental strand, 22023091 - 22023046
Alignment:
Q  209 tgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    |||||||||||||||||||||  |||||||||||||||||| ||||||    
T  22023091 tgagtaaataggcaattaccc--cctgaaattgtaagtttcttcaatt 22023046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 213 - 256
Target Start/End: Complemental strand, 34959249 - 34959208
Alignment:
Q  213 taaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    ||||||||||||||||||  ||||||||||||||||||||||||    
T  34959249 taaataggcaattacccc--ctgaaattgtaagtttcgtcaatt 34959208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 210 - 256
Target Start/End: Original strand, 22113870 - 22113914
Alignment:
Q  210 gagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    |||||||||||||||||||||   |||||||||||||||||||||||    
T  22113870 gagtaaataggcaattacccca--tgaaattgtaagtttcgtcaatt 22113914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 207 - 254
Target Start/End: Complemental strand, 35394829 - 35394783
Alignment:
Q  207 tttgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaa 254  Q
    ||||||||||||| ||||||||| |||||||||||||| |||||||||    
T  35394829 tttgagtaaatagtcaattaccc-tcctgaaattgtaactttcgtcaa 35394783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 210 - 256
Target Start/End: Complemental strand, 40525571 - 40525527
Alignment:
Q  210 gagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    |||||||||||||||||||||   |||||||||||||||||||||||    
T  40525571 gagtaaataggcaattacccca--tgaaattgtaagtttcgtcaatt 40525527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 210 - 256
Target Start/End: Original strand, 43774526 - 43774570
Alignment:
Q  210 gagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    ||||| ||||||||||||||||  |||||||||||||||||||||||    
T  43774526 gagtagataggcaattacccct--tgaaattgtaagtttcgtcaatt 43774570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 207 - 256
Target Start/End: Original strand, 18829060 - 18829107
Alignment:
Q  207 tttgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    |||||||||||||||||||| ||| |  ||||||||||||||||||||||    
T  18829060 tttgagtaaataggcaattatccccc--gaaattgtaagtttcgtcaatt 18829107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 207 - 256
Target Start/End: Complemental strand, 18830303 - 18830256
Alignment:
Q  207 tttgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    |||||||||||||| ||||| |||  ||||||||||||||||||||||||    
T  18830303 tttgagtaaataggaaattatccc--ctgaaattgtaagtttcgtcaatt 18830256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 210 - 248
Target Start/End: Complemental strand, 22599838 - 22599800
Alignment:
Q  210 gagtaaataggcaattacccctcctgaaattgtaagttt 248  Q
    ||||||||||||||||||||  |||||||||||||||||    
T  22599838 gagtaaataggcaattaccctccctgaaattgtaagttt 22599800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 206 - 256
Target Start/End: Original strand, 24181871 - 24181920
Alignment:
Q  206 atttgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    |||||||||||||| ||||| |||||| |||||||||||||||| ||||||    
T  24181871 atttgagtaaatagtcaatttcccctc-tgaaattgtaagtttcatcaatt 24181920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 210 - 256
Target Start/End: Original strand, 33227667 - 33227712
Alignment:
Q  210 gagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    ||||||||||| ||||| ||| |||||||||||||||||||||||||    
T  33227667 gagtaaataggaaattatccc-cctgaaattgtaagtttcgtcaatt 33227712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 210 - 256
Target Start/End: Complemental strand, 34994790 - 34994745
Alignment:
Q  210 gagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    |||||||||||||||||| || |||||||||||||||||| ||||||    
T  34994790 gagtaaataggcaattacacc-cctgaaattgtaagtttcatcaatt 34994745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 210 - 256
Target Start/End: Complemental strand, 48937300 - 48937255
Alignment:
Q  210 gagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    |||||||||||||||||| || | |||||||||||||||||||||||    
T  48937300 gagtaaataggcaattactcc-cttgaaattgtaagtttcgtcaatt 48937255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 210 - 255
Target Start/End: Original strand, 5852388 - 5852432
Alignment:
Q  210 gagtaaataggcaattacccctcctgaaattgtaagtttcgtcaat 255  Q
    ||||||||||||||||| ||| | ||||||||||||||||||||||    
T  5852388 gagtaaataggcaattatccc-cttgaaattgtaagtttcgtcaat 5852432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 207 - 256
Target Start/End: Original strand, 12231004 - 12231052
Alignment:
Q  207 tttgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    ||||||||||||| |||||||||| || ||||||||| ||||||||||||    
T  12231004 tttgagtaaatagtcaattacccc-cccgaaattgtaggtttcgtcaatt 12231052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 208 - 256
Target Start/End: Complemental strand, 14104010 - 14103964
Alignment:
Q  208 ttgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    |||||||||||| |||||| |||  ||||||||||||||||||||||||    
T  14104010 ttgagtaaatagtcaattatccc--ctgaaattgtaagtttcgtcaatt 14103964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 208 - 256
Target Start/End: Complemental strand, 14414027 - 14413981
Alignment:
Q  208 ttgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    |||||||||||| |||||| |||  ||||||||||||||||||||||||    
T  14414027 ttgagtaaatagtcaattatccc--ctgaaattgtaagtttcgtcaatt 14413981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 211 - 256
Target Start/End: Original strand, 21386393 - 21386437
Alignment:
Q  211 agtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    |||||||||||||||||| | | |||||||||||||||||||||||    
T  21386393 agtaaataggcaattacctc-catgaaattgtaagtttcgtcaatt 21386437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 209 - 256
Target Start/End: Original strand, 21458607 - 21458651
Alignment:
Q  209 tgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    ||||||||||| |||||||||||   ||||||||||||||||||||||    
T  21458607 tgagtaaatagacaattacccct---gaaattgtaagtttcgtcaatt 21458651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 211 - 256
Target Start/End: Original strand, 28294240 - 28294284
Alignment:
Q  211 agtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    ||||||||| ||||| |||| |||||||||||||||||||||||||    
T  28294240 agtaaatagtcaatttcccc-cctgaaattgtaagtttcgtcaatt 28294284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 209 - 256
Target Start/End: Original strand, 44378790 - 44378834
Alignment:
Q  209 tgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    ||||||||||| |||||||||||   ||||||||||||||||||||||    
T  44378790 tgagtaaatagtcaattacccct---gaaattgtaagtttcgtcaatt 44378834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 209 - 256
Target Start/End: Original strand, 44387657 - 44387701
Alignment:
Q  209 tgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    ||||||||||| |||||||||||   ||||||||||||||||||||||    
T  44387657 tgagtaaatagtcaattacccct---gaaattgtaagtttcgtcaatt 44387701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 209 - 256
Target Start/End: Original strand, 44471839 - 44471883
Alignment:
Q  209 tgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    ||||||||||||||||||||   ||| |||||||||||||||||||||    
T  44471839 tgagtaaataggcaattacc---cctaaaattgtaagtttcgtcaatt 44471883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 207 - 256
Target Start/End: Complemental strand, 46101007 - 46100959
Alignment:
Q  207 tttgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    ||||||||||||| ||||| |||| |||||||||||||||||| ||||||    
T  46101007 tttgagtaaatagtcaatttcccc-cctgaaattgtaagtttcatcaatt 46100959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 211 - 256
Target Start/End: Complemental strand, 48344428 - 48344384
Alignment:
Q  211 agtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    ||||||||| ||||| ||| ||||||||||||||||||||||||||    
T  48344428 agtaaatagtcaatttccc-tcctgaaattgtaagtttcgtcaatt 48344384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 208 - 256
Target Start/End: Original strand, 5668243 - 5668290
Alignment:
Q  208 ttgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    |||||||||||| ||||| |||| |||||||||||||||||| ||||||    
T  5668243 ttgagtaaatagtcaatttcccc-cctgaaattgtaagtttcatcaatt 5668290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 209 - 256
Target Start/End: Complemental strand, 17775407 - 17775362
Alignment:
Q  209 tgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    ||||||||||||||||||  ||  ||||||||||||||||||||||||    
T  17775407 tgagtaaataggcaattattcc--ctgaaattgtaagtttcgtcaatt 17775362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 208 - 256
Target Start/End: Original strand, 19071437 - 19071484
Alignment:
Q  208 ttgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    |||||||||||| |||||  ||| |||||||||||||||||||||||||    
T  19071437 ttgagtaaatagtcaattttccc-cctgaaattgtaagtttcgtcaatt 19071484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 210 - 254
Target Start/End: Complemental strand, 30163604 - 30163560
Alignment:
Q  210 gagtaaataggcaattacccctcctgaaattgtaagtttcgtcaa 254  Q
    ||||||||| |||||||  |||| |||||||||||||||||||||    
T  30163604 gagtaaataagcaattattcctcttgaaattgtaagtttcgtcaa 30163560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 210 - 254
Target Start/End: Complemental strand, 31286980 - 31286937
Alignment:
Q  210 gagtaaataggcaattacccctcctgaaattgtaagtttcgtcaa 254  Q
    |||||||||| |||||||||| ||||||||||||| |||||||||    
T  31286980 gagtaaatagtcaattacccc-cctgaaattgtaactttcgtcaa 31286937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 208 - 256
Target Start/End: Original strand, 34345218 - 34345265
Alignment:
Q  208 ttgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    |||||||||||| ||||| |||| |||||||||||| ||||||||||||    
T  34345218 ttgagtaaatagtcaatttcccc-cctgaaattgtaggtttcgtcaatt 34345265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 210 - 254
Target Start/End: Original strand, 35393163 - 35393206
Alignment:
Q  210 gagtaaataggcaattacccctcctgaaattgtaagtttcgtcaa 254  Q
    |||||||||| ||||||||| |||||||||||||| |||||||||    
T  35393163 gagtaaatagtcaattaccc-tcctgaaattgtaactttcgtcaa 35393206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 213 - 256
Target Start/End: Complemental strand, 45259747 - 45259706
Alignment:
Q  213 taaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    ||||||| |||||||||||  |||||||||||||||||||||||    
T  45259747 taaatagtcaattacccct--tgaaattgtaagtttcgtcaatt 45259706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 208 - 256
Target Start/End: Complemental strand, 46230307 - 46230260
Alignment:
Q  208 ttgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    |||||||||||| ||||| |||| |||||||||||||||||| ||||||    
T  46230307 ttgagtaaatagtcaatttcccc-cctgaaattgtaagtttcatcaatt 46230260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 205 - 256
Target Start/End: Complemental strand, 23075440 - 23075390
Alignment:
Q  205 tatttgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    |||||||||||||||||||||||||| ||| |||||||||||||||||||||    
T  23075440 tatttgagtaaataggcaattacccc-cctaaaattgtaagtttcgtcaatt 23075390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 211 - 256
Target Start/End: Original strand, 23074300 - 23074344
Alignment:
Q  211 agtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    |||||||||||||||||||| |||||||||||||||||||||||||    
T  23074300 agtaaataggcaattacccc-cctgaaattgtaagtttcgtcaatt 23074344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 210 - 256
Target Start/End: Complemental strand, 5430667 - 5430622
Alignment:
Q  210 gagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    ||||||||||||||||||||| |||||||||||||||||| ||||||    
T  5430667 gagtaaataggcaattacccc-cctgaaattgtaagtttcatcaatt 5430622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 210 - 256
Target Start/End: Complemental strand, 32155418 - 32155373
Alignment:
Q  210 gagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    |||||||||||||||||||| ||||||||||||||||| ||||||||    
T  32155418 gagtaaataggcaattaccc-tcctgaaattgtaagttccgtcaatt 32155373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 208 - 256
Target Start/End: Original strand, 1562893 - 1562940
Alignment:
Q  208 ttgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    ||||||||||||||||||| ||||||| |||||||||||||||| ||||    
T  1562893 ttgagtaaataggcaatta-ccctcctaaaattgtaagtttcgttaatt 1562940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 208 - 256
Target Start/End: Original strand, 5430188 - 5430235
Alignment:
Q  208 ttgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    |||||||||||||||||||| || |||||||||||||||||| ||||||    
T  5430188 ttgagtaaataggcaattactcc-cctgaaattgtaagtttcatcaatt 5430235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 208 - 256
Target Start/End: Original strand, 34657801 - 34657848
Alignment:
Q  208 ttgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    |||||||||||| |||||||||| | |||||||||||||||||||||||    
T  34657801 ttgagtaaatagtcaattacccc-cttgaaattgtaagtttcgtcaatt 34657848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 209 - 256
Target Start/End: Original strand, 14608050 - 14608096
Alignment:
Q  209 tgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    ||||||||||| ||||||||| || |||||||||||||||||||||||    
T  14608050 tgagtaaatagacaattaccc-tcttgaaattgtaagtttcgtcaatt 14608096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 210 - 256
Target Start/End: Original strand, 22504224 - 22504268
Alignment:
Q  210 gagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    ||||||||||||||||||| ||  |||||||||||||||||||||||    
T  22504224 gagtaaataggcaattacctct--tgaaattgtaagtttcgtcaatt 22504268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 210 - 256
Target Start/End: Complemental strand, 1050977 - 1050932
Alignment:
Q  210 gagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    ||||||||||||||||||| | ||||||||||||| |||||||||||    
T  1050977 gagtaaataggcaattacctc-cctgaaattgtaaatttcgtcaatt 1050932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 210 - 256
Target Start/End: Complemental strand, 1897251 - 1897206
Alignment:
Q  210 gagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    ||||||||||||||||| || || |||||||||||||||||||||||    
T  1897251 gagtaaataggcaattatcc-tcttgaaattgtaagtttcgtcaatt 1897206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 210 - 252
Target Start/End: Original strand, 10624456 - 10624497
Alignment:
Q  210 gagtaaataggcaattacccctcctgaaattgtaagtttcgtc 252  Q
    ||||||||||||||||| ||| |||||||||||||||||||||    
T  10624456 gagtaaataggcaattatccc-cctgaaattgtaagtttcgtc 10624497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 210 - 256
Target Start/End: Original strand, 11098928 - 11098973
Alignment:
Q  210 gagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    |||||||||| |||||||||| | |||||||||||||||||||||||    
T  11098928 gagtaaatagtcaattacccc-cttgaaattgtaagtttcgtcaatt 11098973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 210 - 256
Target Start/End: Complemental strand, 21784385 - 21784340
Alignment:
Q  210 gagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    |||||||||| |||||||||||| |||||||||||||||| ||||||    
T  21784385 gagtaaatagtcaattacccctc-tgaaattgtaagtttcatcaatt 21784340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 210 - 256
Target Start/End: Complemental strand, 29724213 - 29724168
Alignment:
Q  210 gagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    |||||||||| ||||| |||||| |||||||||||||||||||||||    
T  29724213 gagtaaatagtcaatttcccctc-tgaaattgtaagtttcgtcaatt 29724168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 206 - 254
Target Start/End: Original strand, 4137652 - 4137698
Alignment:
Q  206 atttgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaa 254  Q
    |||||||||||||| |||||||||  ||||||||||||| |||||||||    
T  4137652 atttgagtaaatagtcaattaccc--cctgaaattgtaactttcgtcaa 4137698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 207 - 256
Target Start/End: Original strand, 11624626 - 11624674
Alignment:
Q  207 tttgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    ||||||||||||| ||||| |||| |||||||||||||||||| ||||||    
T  11624626 tttgagtaaatagtcaatttcccc-cctgaaattgtaagtttcatcaatt 11624674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 212 - 256
Target Start/End: Complemental strand, 14432086 - 14432044
Alignment:
Q  212 gtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    |||||||| ||||||||||  ||||||||||||||||||||||||    
T  14432086 gtaaatagacaattacccc--ctgaaattgtaagtttcgtcaatt 14432044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 208 - 256
Target Start/End: Original strand, 23065323 - 23065369
Alignment:
Q  208 ttgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    |||||||||||||||||| ||||  ||||||||||||||||| ||||||    
T  23065323 ttgagtaaataggcaatttcccc--ctgaaattgtaagtttcatcaatt 23065369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 210 - 254
Target Start/End: Complemental strand, 1387706 - 1387663
Alignment:
Q  210 gagtaaataggcaattacccctcctgaaattgtaagtttcgtcaa 254  Q
    |||||||||| |||||||||| ||||||||||||| |||||||||    
T  1387706 gagtaaatagtcaattacccc-cctgaaattgtaactttcgtcaa 1387663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 208 - 256
Target Start/End: Complemental strand, 2318568 - 2318521
Alignment:
Q  208 ttgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    |||||||||||| ||||| |||| |||||||||||||||||| ||||||    
T  2318568 ttgagtaaatagtcaatttcccc-cctgaaattgtaagtttcatcaatt 2318521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 210 - 254
Target Start/End: Complemental strand, 4139029 - 4138986
Alignment:
Q  210 gagtaaataggcaattacccctcctgaaattgtaagtttcgtcaa 254  Q
    |||||||||| |||||||||| ||||||||||||| |||||||||    
T  4139029 gagtaaatagtcaattacccc-cctgaaattgtaactttcgtcaa 4138986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 208 - 256
Target Start/End: Complemental strand, 8743177 - 8743130
Alignment:
Q  208 ttgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    |||||||||||| ||||| |||| |||||||||||||||||| ||||||    
T  8743177 ttgagtaaatagtcaatttcccc-cctgaaattgtaagtttcatcaatt 8743130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 210 - 256
Target Start/End: Complemental strand, 22505076 - 22505033
Alignment:
Q  210 gagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    |||||||||||||||||||   |||||||||||||||||| ||||||    
T  22505076 gagtaaataggcaattacc---cctgaaattgtaagtttcatcaatt 22505033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 210 - 256
Target Start/End: Complemental strand, 32800119 - 32800076
Alignment:
Q  210 gagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    ||||||||||||||||||   |||||||| |||||||||||||||||    
T  32800119 gagtaaataggcaattac---tcctgaaaatgtaagtttcgtcaatt 32800076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 78)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 209 - 256
Target Start/End: Original strand, 7971921 - 7971967
Alignment:
Q  209 tgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||    
T  7971921 tgagtaaataggcaattaccc-tcctgaaattgtaagtttcgtcaatt 7971967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 205 - 256
Target Start/End: Complemental strand, 9360635 - 9360585
Alignment:
Q  205 tatttgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    ||||||||||||||||||||||| | ||||||||||||||||||||||||||    
T  9360635 tatttgagtaaataggcaattactc-tcctgaaattgtaagtttcgtcaatt 9360585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 209 - 256
Target Start/End: Original strand, 30317557 - 30317603
Alignment:
Q  209 tgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||    
T  30317557 tgagtaaataggcaattacccc-cctgaaattgtaagtttcgtcaatt 30317603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 213 - 256
Target Start/End: Complemental strand, 35194979 - 35194936
Alignment:
Q  213 taaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    ||||||||||||||||||| ||||||||||||||||||||||||    
T  35194979 taaataggcaattaccccttctgaaattgtaagtttcgtcaatt 35194936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 205 - 256
Target Start/End: Original strand, 36870092 - 36870142
Alignment:
Q  205 tatttgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    ||||||||||||||| |||||||||| |||||||||||||||||||||||||    
T  36870092 tatttgagtaaatagacaattacccc-cctgaaattgtaagtttcgtcaatt 36870142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 210 - 256
Target Start/End: Original strand, 36111478 - 36111523
Alignment:
Q  210 gagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||    
T  36111478 gagtaaataggcaattacccctc-tgaaattgtaagtttcgtcaatt 36111523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 207 - 256
Target Start/End: Complemental strand, 39334513 - 39334466
Alignment:
Q  207 tttgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  39334513 tttgagtaaataggcaattacccc--ctgaaattgtaagtttcgtcaatt 39334466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 210 - 256
Target Start/End: Complemental strand, 53140064 - 53140019
Alignment:
Q  210 gagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||    
T  53140064 gagtaaataggcaattaccc-tcctgaaattgtaagtttcgtcaatt 53140019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 207 - 256
Target Start/End: Complemental strand, 48800518 - 48800470
Alignment:
Q  207 tttgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    ||||||||||||| ||||||||| ||||||||||||||||||||||||||    
T  48800518 tttgagtaaatagtcaattaccc-tcctgaaattgtaagtttcgtcaatt 48800470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 208 - 256
Target Start/End: Complemental strand, 3886254 - 3886206
Alignment:
Q  208 ttgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    |||||||||||| ||||| ||||||||||||||||||||||| ||||||    
T  3886254 ttgagtaaatagtcaatttcccctcctgaaattgtaagtttcatcaatt 3886206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 212 - 256
Target Start/End: Complemental strand, 6194993 - 6194950
Alignment:
Q  212 gtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    ||||||||||||||||||| |||||||||||||||||||||||||    
T  6194993 gtaaataggcaattacccc-cctgaaattgtaagtttcgtcaatt 6194950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 208 - 256
Target Start/End: Complemental strand, 23591344 - 23591297
Alignment:
Q  208 ttgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    ||||||||||||||||||||||| ||| |||||||||||||||||||||    
T  23591344 ttgagtaaataggcaattacccc-cctaaaattgtaagtttcgtcaatt 23591297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 209 - 256
Target Start/End: Original strand, 6334989 - 6335036
Alignment:
Q  209 tgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    ||||||||||| ||||||||||  ||||||||||||||||||||||||    
T  6334989 tgagtaaatagtcaattaccccctctgaaattgtaagtttcgtcaatt 6335036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 209 - 256
Target Start/End: Original strand, 6335939 - 6335986
Alignment:
Q  209 tgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    ||||||||||| ||||||||||  ||||||||||||||||||||||||    
T  6335939 tgagtaaatagtcaattaccccctctgaaattgtaagtttcgtcaatt 6335986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 209 - 256
Target Start/End: Complemental strand, 15031926 - 15031880
Alignment:
Q  209 tgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    |||||||||||||||||||||| ||| |||||||||||||||||||||    
T  15031926 tgagtaaataggcaattacccc-cctaaaattgtaagtttcgtcaatt 15031880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 209 - 256
Target Start/End: Original strand, 37687494 - 37687540
Alignment:
Q  209 tgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    |||||||||||||||||||||| |||||||||||||||||| ||||||    
T  37687494 tgagtaaataggcaattacccc-cctgaaattgtaagtttcatcaatt 37687540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 205 - 256
Target Start/End: Original strand, 38575536 - 38575586
Alignment:
Q  205 tatttgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    ||||||||||||||| |||||||| ||| |||||||||||||||||||||||    
T  38575536 tatttgagtaaatagacaattacctctc-tgaaattgtaagtttcgtcaatt 38575586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 210 - 256
Target Start/End: Original strand, 4939854 - 4939899
Alignment:
Q  210 gagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    |||||||||||||||||| |||| |||||||||||||||||||||||    
T  4939854 gagtaaataggcaattactcctc-tgaaattgtaagtttcgtcaatt 4939899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 210 - 256
Target Start/End: Original strand, 6644018 - 6644063
Alignment:
Q  210 gagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    ||||||||| ||||||||||||| |||||||||||||||||||||||    
T  6644018 gagtaaataagcaattacccctc-tgaaattgtaagtttcgtcaatt 6644063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 210 - 256
Target Start/End: Original strand, 13966696 - 13966741
Alignment:
Q  210 gagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    ||||||||||||||||||||| | |||||||||||||||||||||||    
T  13966696 gagtaaataggcaattacccc-cttgaaattgtaagtttcgtcaatt 13966741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 207 - 256
Target Start/End: Original strand, 15030819 - 15030866
Alignment:
Q  207 tttgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    |||||||||||||||||||||||  |||||||||||||||||| ||||||    
T  15030819 tttgagtaaataggcaattaccc--cctgaaattgtaagtttcatcaatt 15030866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 210 - 256
Target Start/End: Original strand, 26171677 - 26171722
Alignment:
Q  210 gagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    |||||||||| |||||||||| |||||||||||||||||||||||||    
T  26171677 gagtaaatagtcaattacccc-cctgaaattgtaagtttcgtcaatt 26171722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 210 - 256
Target Start/End: Complemental strand, 31559969 - 31559924
Alignment:
Q  210 gagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    ||||||||||||||||||||||  |||||||||||||||||||||||    
T  31559969 gagtaaataggcaattacccctt-tgaaattgtaagtttcgtcaatt 31559924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 210 - 256
Target Start/End: Complemental strand, 40146490 - 40146444
Alignment:
Q  210 gagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    ||||||||||  ||||||||| |||||||||||||||||||||||||    
T  40146490 gagtaaatagtaaattaccccccctgaaattgtaagtttcgtcaatt 40146444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 208 - 256
Target Start/End: Complemental strand, 6645022 - 6644976
Alignment:
Q  208 ttgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    |||||||||||||||||||||  | ||||||||||||||||||||||||    
T  6645022 ttgagtaaataggcaattacc--ttctgaaattgtaagtttcgtcaatt 6644976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 208 - 256
Target Start/End: Complemental strand, 10663870 - 10663824
Alignment:
Q  208 ttgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    ||||||||||||||||||||| ||  |||||||||||||||||||||||    
T  10663870 ttgagtaaataggcaattacctct--tgaaattgtaagtttcgtcaatt 10663824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 208 - 256
Target Start/End: Complemental strand, 10878015 - 10877969
Alignment:
Q  208 ttgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    ||||||||||||||||||||| ||  |||||||||||||||||||||||    
T  10878015 ttgagtaaataggcaattacctct--tgaaattgtaagtttcgtcaatt 10877969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 208 - 256
Target Start/End: Complemental strand, 22525377 - 22525331
Alignment:
Q  208 ttgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    ||||||||||||||||||| |||  ||||||||||||||||||||||||    
T  22525377 ttgagtaaataggcaattatccc--ctgaaattgtaagtttcgtcaatt 22525331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 204 - 256
Target Start/End: Original strand, 56279761 - 56279811
Alignment:
Q  204 gtatttgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    |||||||||||||||| |||||||||  || ||||||||||||||||||||||    
T  56279761 gtatttgagtaaatagtcaattaccc--cccgaaattgtaagtttcgtcaatt 56279811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 209 - 256
Target Start/End: Complemental strand, 1862228 - 1862183
Alignment:
Q  209 tgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    ||||||||||| ||||||||||  ||||||||||||||||||||||||    
T  1862228 tgagtaaatagtcaattacccc--ctgaaattgtaagtttcgtcaatt 1862183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 207 - 256
Target Start/End: Original strand, 22524299 - 22524344
Alignment:
Q  207 tttgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    |||||||||||||||||||||||    |||||||||||||||||||||||    
T  22524299 tttgagtaaataggcaattaccc----tgaaattgtaagtttcgtcaatt 22524344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 209 - 256
Target Start/End: Complemental strand, 23520186 - 23520141
Alignment:
Q  209 tgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    |||||||||||||||||||||  |||||||||||||||||| ||||||    
T  23520186 tgagtaaataggcaattaccc--cctgaaattgtaagtttcatcaatt 23520141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 209 - 256
Target Start/End: Original strand, 30288654 - 30288701
Alignment:
Q  209 tgagtaaataggcaa-ttacccctcctgaaattgtaagtttcgtcaatt 256  Q
    ||||||||||||||| ||||||| |||||||||||||||||||||||||    
T  30288654 tgagtaaataggcaacttacccc-cctgaaattgtaagtttcgtcaatt 30288701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 209 - 256
Target Start/End: Complemental strand, 36871071 - 36871026
Alignment:
Q  209 tgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    |||||||||||||||||||||  ||||||||||| |||||||||||||    
T  36871071 tgagtaaataggcaattaccc--cctgaaattgtgagtttcgtcaatt 36871026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 208 - 256
Target Start/End: Complemental strand, 41611540 - 41611493
Alignment:
Q  208 ttgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    |||||||||||| |||||| ||| |||||||||||||||||||||||||    
T  41611540 ttgagtaaatagacaattatccc-cctgaaattgtaagtttcgtcaatt 41611493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 209 - 256
Target Start/End: Complemental strand, 47309306 - 47309261
Alignment:
Q  209 tgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    ||||||||||| ||||||||||  ||||||||||||||||||||||||    
T  47309306 tgagtaaatagtcaattacccc--ctgaaattgtaagtttcgtcaatt 47309261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 208 - 256
Target Start/End: Original strand, 55082431 - 55082478
Alignment:
Q  208 ttgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    |||||||||||| ||||||||| || |||||||||||||||||||||||    
T  55082431 ttgagtaaatagtcaattaccc-tcttgaaattgtaagtttcgtcaatt 55082478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 209 - 256
Target Start/End: Original strand, 1613444 - 1613490
Alignment:
Q  209 tgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    ||||||||||| ||||||||| ||||||||||||||||||| ||||||    
T  1613444 tgagtaaatagtcaattaccc-tcctgaaattgtaagtttcttcaatt 1613490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 209 - 256
Target Start/End: Complemental strand, 4941176 - 4941130
Alignment:
Q  209 tgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    ||||||||||||||||||| | |||||||||| |||||||||||||||    
T  4941176 tgagtaaataggcaattactc-tcctgaaattataagtttcgtcaatt 4941130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 209 - 256
Target Start/End: Original strand, 17606900 - 17606947
Alignment:
Q  209 tgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    ||||||||||| ||||| |||| |||||||||||||||||| ||||||    
T  17606900 tgagtaaatagtcaatttccccccctgaaattgtaagtttcatcaatt 17606947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 205 - 256
Target Start/End: Original strand, 19169287 - 19169337
Alignment:
Q  205 tatttgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    ||||||||||||||| ||||| |||| |||||||||||| ||||||||||||    
T  19169287 tatttgagtaaatagtcaatttcccc-cctgaaattgtaggtttcgtcaatt 19169337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 209 - 256
Target Start/End: Complemental strand, 23162078 - 23162032
Alignment:
Q  209 tgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    ||||||||||| ||||| ||| ||||||||||||||||||||||||||    
T  23162078 tgagtaaatagtcaatttccc-tcctgaaattgtaagtttcgtcaatt 23162032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 210 - 256
Target Start/End: Complemental strand, 26172543 - 26172499
Alignment:
Q  210 gagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    |||||||||| |||||||||||  |||||||||||||||||||||||    
T  26172543 gagtaaatagtcaattacccct--tgaaattgtaagtttcgtcaatt 26172499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 209 - 256
Target Start/End: Complemental strand, 29617675 - 29617629
Alignment:
Q  209 tgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    ||||||||||||||| || |||||| ||||||||||||||||||||||    
T  29617675 tgagtaaataggcaactatccctcc-gaaattgtaagtttcgtcaatt 29617629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 209 - 256
Target Start/End: Original strand, 29761366 - 29761412
Alignment:
Q  209 tgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    |||||||||||||||||||||| |||||| ||||||||||| ||||||    
T  29761366 tgagtaaataggcaattacccc-cctgaagttgtaagtttcatcaatt 29761412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 210 - 256
Target Start/End: Complemental strand, 29762515 - 29762471
Alignment:
Q  210 gagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    ||||||||||||||||||||| |  ||||||||||||||||||||||    
T  29762515 gagtaaataggcaattacccccc--gaaattgtaagtttcgtcaatt 29762471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 210 - 256
Target Start/End: Complemental strand, 32465695 - 32465651
Alignment:
Q  210 gagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    |||||||||||||||||||||  ||||||||||||||||| ||||||    
T  32465695 gagtaaataggcaattacccc--ctgaaattgtaagtttcatcaatt 32465651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 209 - 256
Target Start/End: Original strand, 34016855 - 34016901
Alignment:
Q  209 tgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    ||||||||||| ||||| |||| |||||||||||||||||||||||||    
T  34016855 tgagtaaatagtcaatttcccc-cctgaaattgtaagtttcgtcaatt 34016901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 205 - 256
Target Start/End: Original strand, 37998026 - 37998076
Alignment:
Q  205 tatttgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    ||||||||||||||| ||||| |||| |||||||||||||||||| ||||||    
T  37998026 tatttgagtaaatagtcaatttcccc-cctgaaattgtaagtttcatcaatt 37998076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 210 - 256
Target Start/End: Original strand, 41610066 - 41610110
Alignment:
Q  210 gagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    ||||||||||| |||||||||  ||||||||||||||||||||||||    
T  41610066 gagtaaataggtaattacccc--ctgaaattgtaagtttcgtcaatt 41610110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 209 - 256
Target Start/End: Complemental strand, 42260406 - 42260360
Alignment:
Q  209 tgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    |||||||||||||||||| || |||||||||||||||||| |||||||    
T  42260406 tgagtaaataggcaattatcc-tcctgaaattgtaagttttgtcaatt 42260360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 210 - 256
Target Start/End: Complemental strand, 55497359 - 55497315
Alignment:
Q  210 gagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    |||||||||| ||||||||||  ||||||||||||||||||||||||    
T  55497359 gagtaaatagacaattacccc--ctgaaattgtaagtttcgtcaatt 55497315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 210 - 256
Target Start/End: Original strand, 6955540 - 6955586
Alignment:
Q  210 gagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    |||||||||| |||||  ||| |||||||||||||||||||||||||    
T  6955540 gagtaaatagtcaatttgcccccctgaaattgtaagtttcgtcaatt 6955586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 208 - 254
Target Start/End: Complemental strand, 16508259 - 16508214
Alignment:
Q  208 ttgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaa 254  Q
    |||||||||||| |||||||||| ||||||||||||| |||||||||    
T  16508259 ttgagtaaatagtcaattacccc-cctgaaattgtaactttcgtcaa 16508214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 210 - 256
Target Start/End: Complemental strand, 21312287 - 21312242
Alignment:
Q  210 gagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    ||||||||||||||||||||| | |||||||||||||||||| ||||    
T  21312287 gagtaaataggcaattacccc-cttgaaattgtaagtttcgttaatt 21312242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 210 - 256
Target Start/End: Complemental strand, 25490320 - 25490275
Alignment:
Q  210 gagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    ||||||||| |||||||||| ||||||||||||||||||| ||||||    
T  25490320 gagtaaataagcaattaccc-tcctgaaattgtaagtttcatcaatt 25490275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 210 - 256
Target Start/End: Original strand, 31559032 - 31559077
Alignment:
Q  210 gagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    |||||||||  ||||||||| ||||||||||||||||||||||||||    
T  31559032 gagtaaataaacaattaccc-tcctgaaattgtaagtttcgtcaatt 31559077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 210 - 256
Target Start/End: Complemental strand, 36077373 - 36077328
Alignment:
Q  210 gagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    |||||||||| ||||| |||| |||||||||||||||||||||||||    
T  36077373 gagtaaatagtcaatttcccc-cctgaaattgtaagtttcgtcaatt 36077328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 210 - 256
Target Start/End: Complemental strand, 56280616 - 56280571
Alignment:
Q  210 gagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    |||||||||| |||||||||||| ||||| |||||||||||||||||    
T  56280616 gagtaaatagtcaattacccctc-tgaaactgtaagtttcgtcaatt 56280571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 209 - 254
Target Start/End: Original strand, 16506868 - 16506912
Alignment:
Q  209 tgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaa 254  Q
    ||||||||||| |||||||||| ||||||||||||| |||||||||    
T  16506868 tgagtaaatagtcaattacccc-cctgaaattgtaactttcgtcaa 16506912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 208 - 256
Target Start/End: Original strand, 17214934 - 17214980
Alignment:
Q  208 ttgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    ||||||||||||| ||||||||   ||||||||||||||||||||||||    
T  17214934 ttgagtaaataggtaattaccct--ctgaaattgtaagtttcgtcaatt 17214980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 207 - 256
Target Start/End: Original strand, 22535194 - 22535242
Alignment:
Q  207 tttgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    ||||||||||||| ||||| |||| |||||||||||||||||| ||||||    
T  22535194 tttgagtaaatagtcaatttcccc-cctgaaattgtaagtttcatcaatt 22535242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 209 - 254
Target Start/End: Complemental strand, 23102418 - 23102373
Alignment:
Q  209 tgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaa 254  Q
    ||||||||||| |||||||||| ||||||||||||  |||||||||    
T  23102418 tgagtaaatagtcaattaccccccctgaaattgtagctttcgtcaa 23102373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 207 - 256
Target Start/End: Complemental strand, 25706229 - 25706181
Alignment:
Q  207 tttgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    |||||| |||||| |||||| ||||| |||||||||||||||||||||||    
T  25706229 tttgagaaaatagacaattatccctc-tgaaattgtaagtttcgtcaatt 25706181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 208 - 249
Target Start/End: Complemental strand, 45765759 - 45765719
Alignment:
Q  208 ttgagtaaataggcaattacccctcctgaaattgtaagtttc 249  Q
    ||||||||||||||||||||||||  ||||||||||||||||    
T  45765759 ttgagtaaataggcaattacccct-atgaaattgtaagtttc 45765719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 207 - 256
Target Start/End: Complemental strand, 48614189 - 48614141
Alignment:
Q  207 tttgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    ||||||||||||| ||||| |||| |||||||||||||||||| ||||||    
T  48614189 tttgagtaaatagtcaatttcccc-cctgaaattgtaagtttcatcaatt 48614141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 207 - 248
Target Start/End: Complemental strand, 56444317 - 56444277
Alignment:
Q  207 tttgagtaaataggcaattacccctcctgaaattgtaagttt 248  Q
    ||||||||||||| ||||||||| ||||||||||||||||||    
T  56444317 tttgagtaaatagtcaattaccc-tcctgaaattgtaagttt 56444277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 210 - 254
Target Start/End: Original strand, 677046 - 677089
Alignment:
Q  210 gagtaaataggcaattacccctcctgaaattgtaagtttcgtcaa 254  Q
    |||||||||| |||||||||| ||||||||||||| |||||||||    
T  677046 gagtaaatagtcaattacccc-cctgaaattgtaactttcgtcaa 677089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 210 - 254
Target Start/End: Original strand, 2613631 - 2613674
Alignment:
Q  210 gagtaaataggcaattacccctcctgaaattgtaagtttcgtcaa 254  Q
    |||||||||| |||||||||| ||||||||||||| |||||||||    
T  2613631 gagtaaatagtcaattacccc-cctgaaattgtaactttcgtcaa 2613674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 210 - 254
Target Start/End: Complemental strand, 2615136 - 2615093
Alignment:
Q  210 gagtaaataggcaattacccctcctgaaattgtaagtttcgtcaa 254  Q
    |||||||||| |||||||||| ||||||||||||| |||||||||    
T  2615136 gagtaaatagtcaattacccc-cctgaaattgtaactttcgtcaa 2615093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 210 - 254
Target Start/End: Complemental strand, 7390209 - 7390166
Alignment:
Q  210 gagtaaataggcaattacccctcctgaaattgtaagtttcgtcaa 254  Q
    ||||||||||||||||||| || |||| |||||||||||||||||    
T  7390209 gagtaaataggcaattacctct-ctgagattgtaagtttcgtcaa 7390166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 208 - 256
Target Start/End: Original strand, 22731055 - 22731102
Alignment:
Q  208 ttgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    |||||||||||| ||||| |||| |||||||||||||||||| ||||||    
T  22731055 ttgagtaaatagtcaatttcccc-cctgaaattgtaagtttcatcaatt 22731102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 208 - 256
Target Start/End: Complemental strand, 26649704 - 26649657
Alignment:
Q  208 ttgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    ||||||||||||||||||  |||| | ||||||||||||||||||||||    
T  26649704 ttgagtaaataggcaattcaccctac-gaaattgtaagtttcgtcaatt 26649657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 209 - 256
Target Start/End: Complemental strand, 34733369 - 34733324
Alignment:
Q  209 tgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    ||||||||||| |||||| |||  ||||||||||||||||||||||||    
T  34733369 tgagtaaatagtcaattatccc--ctgaaattgtaagtttcgtcaatt 34733324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 209 - 256
Target Start/End: Original strand, 35194014 - 35194059
Alignment:
Q  209 tgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    ||||||||||||||||||  |||| |||||| ||||||||||||||||    
T  35194014 tgagtaaataggcaatta--cctcatgaaatcgtaagtttcgtcaatt 35194059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 210 - 254
Target Start/End: Original strand, 50662995 - 50663038
Alignment:
Q  210 gagtaaataggcaattacccctcctgaaattgtaagtttcgtcaa 254  Q
    |||||||||| |||||||||| ||||||||||||| |||||||||    
T  50662995 gagtaaatagtcaattacccc-cctgaaattgtaactttcgtcaa 50663038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 210 - 254
Target Start/End: Complemental strand, 50664536 - 50664493
Alignment:
Q  210 gagtaaataggcaattacccctcctgaaattgtaagtttcgtcaa 254  Q
    |||||||||| |||||||||| ||||||||||||| |||||||||    
T  50664536 gagtaaatagtcaattacccc-cctgaaattgtaactttcgtcaa 50664493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 210 - 254
Target Start/End: Original strand, 55978475 - 55978518
Alignment:
Q  210 gagtaaataggcaattacccctcctgaaattgtaagtttcgtcaa 254  Q
    |||||||||| |||||||||| ||||||||||||| |||||||||    
T  55978475 gagtaaatagtcaattacccc-cctgaaattgtaactttcgtcaa 55978518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 59)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 205 - 256
Target Start/End: Complemental strand, 25360431 - 25360381
Alignment:
Q  205 tatttgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    |||||||||||||||||||||| ||||| |||||||||||||||||||||||    
T  25360431 tatttgagtaaataggcaattatccctc-tgaaattgtaagtttcgtcaatt 25360381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 209 - 256
Target Start/End: Original strand, 29587097 - 29587143
Alignment:
Q  209 tgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||    
T  29587097 tgagtaaataggcaattaccc-tcctgaaattgtaagtttcgtcaatt 29587143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 209 - 256
Target Start/End: Original strand, 36026968 - 36027014
Alignment:
Q  209 tgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||    
T  36026968 tgagtaaataggcaattacccc-cctgaaattgtaagtttcgtcaatt 36027014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 209 - 256
Target Start/End: Complemental strand, 45252574 - 45252527
Alignment:
Q  209 tgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    |||||||||||||||||||| | |||||||||||||||||||||||||    
T  45252574 tgagtaaataggcaattacctcccctgaaattgtaagtttcgtcaatt 45252527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 210 - 256
Target Start/End: Complemental strand, 1033927 - 1033882
Alignment:
Q  210 gagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||    
T  1033927 gagtaaataggcaattacccc-cctgaaattgtaagtttcgtcaatt 1033882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 210 - 256
Target Start/End: Complemental strand, 6757049 - 6757004
Alignment:
Q  210 gagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||    
T  6757049 gagtaaataggcaattacccc-cctgaaattgtaagtttcgtcaatt 6757004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 206 - 256
Target Start/End: Original strand, 54627019 - 54627068
Alignment:
Q  206 atttgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    |||||||||||||| |||||||||||| |||||||||||||||||||||||    
T  54627019 atttgagtaaatagtcaattacccctc-tgaaattgtaagtttcgtcaatt 54627068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 207 - 256
Target Start/End: Complemental strand, 31585381 - 31585333
Alignment:
Q  207 tttgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    |||||||||||||||||||||||| | |||||||||||||||||||||||    
T  31585381 tttgagtaaataggcaattacccc-cttgaaattgtaagtttcgtcaatt 31585333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 210 - 256
Target Start/End: Original strand, 20186401 - 20186445
Alignment:
Q  210 gagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    |||||||||||||||||||||  ||||||||||||||||||||||||    
T  20186401 gagtaaataggcaattacccc--ctgaaattgtaagtttcgtcaatt 20186445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 209 - 256
Target Start/End: Complemental strand, 40066679 - 40066633
Alignment:
Q  209 tgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    ||||||||||| |||||||||| |||||||||||||||||||||||||    
T  40066679 tgagtaaatagtcaattacccc-cctgaaattgtaagtttcgtcaatt 40066633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 210 - 256
Target Start/End: Original strand, 987131 - 987176
Alignment:
Q  210 gagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    ||||||||||||||||||||| | |||||||||||||||||||||||    
T  987131 gagtaaataggcaattacccc-catgaaattgtaagtttcgtcaatt 987176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 210 - 256
Target Start/End: Complemental strand, 20820350 - 20820305
Alignment:
Q  210 gagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    |||||||||| |||||||||| |||||||||||||||||||||||||    
T  20820350 gagtaaatagtcaattacccc-cctgaaattgtaagtttcgtcaatt 20820305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 210 - 256
Target Start/End: Original strand, 35234839 - 35234884
Alignment:
Q  210 gagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    |||||||||| |||||||||| |||||||||||||||||||||||||    
T  35234839 gagtaaatagtcaattacccc-cctgaaattgtaagtttcgtcaatt 35234884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 210 - 256
Target Start/End: Original strand, 40791348 - 40791393
Alignment:
Q  210 gagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    |||||||||||||||||||| || |||||||||||||||||||||||    
T  40791348 gagtaaataggcaattacccttc-tgaaattgtaagtttcgtcaatt 40791393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 210 - 256
Target Start/End: Complemental strand, 40792461 - 40792416
Alignment:
Q  210 gagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    ||||||||||||||||||||| | |||||||||||||||||||||||    
T  40792461 gagtaaataggcaattacccc-cttgaaattgtaagtttcgtcaatt 40792416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 210 - 256
Target Start/End: Complemental strand, 46651265 - 46651220
Alignment:
Q  210 gagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    |||||||||| |||||||||| |||||||||||||||||||||||||    
T  46651265 gagtaaatagtcaattacccc-cctgaaattgtaagtttcgtcaatt 46651220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 210 - 251
Target Start/End: Complemental strand, 6756753 - 6756713
Alignment:
Q  210 gagtaaataggcaattacccctcctgaaattgtaagtttcgt 251  Q
    ||||||||||||||||||||| ||||||||||||||||||||    
T  6756753 gagtaaataggcaattacccc-cctgaaattgtaagtttcgt 6756713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 208 - 256
Target Start/End: Complemental strand, 9104090 - 9104044
Alignment:
Q  208 ttgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    |||||||||||| ||||||||||  ||||||||||||||||||||||||    
T  9104090 ttgagtaaatagtcaattacccc--ctgaaattgtaagtttcgtcaatt 9104044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 207 - 256
Target Start/End: Original strand, 45251533 - 45251582
Alignment:
Q  207 tttgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    |||||||||||| |||||||||||  ||||||||||||||||||| ||||    
T  45251533 tttgagtaaatatgcaattaccccctctgaaattgtaagtttcgttaatt 45251582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 208 - 256
Target Start/End: Complemental strand, 11653911 - 11653864
Alignment:
Q  208 ttgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    |||||||||| |||||||||||| |||||||||||||||||| ||||||    
T  11653911 ttgagtaaatgggcaattacccc-cctgaaattgtaagtttcatcaatt 11653864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 208 - 256
Target Start/End: Original strand, 45712408 - 45712455
Alignment:
Q  208 ttgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    |||||||||||| ||||||||| || |||||||||||||||||||||||    
T  45712408 ttgagtaaatagacaattaccc-tcatgaaattgtaagtttcgtcaatt 45712455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 209 - 256
Target Start/End: Complemental strand, 3938357 - 3938311
Alignment:
Q  209 tgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    ||||||||||| ||||| |||| |||||||||||||||||||||||||    
T  3938357 tgagtaaatagtcaatttcccc-cctgaaattgtaagtttcgtcaatt 3938311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 213 - 256
Target Start/End: Original strand, 6756848 - 6756890
Alignment:
Q  213 taaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    |||||||||||||||||| || ||||||||||||||||||||||    
T  6756848 taaataggcaattacccc-ccggaaattgtaagtttcgtcaatt 6756890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 209 - 256
Target Start/End: Complemental strand, 10657253 - 10657207
Alignment:
Q  209 tgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    ||||||||||| ||||| |||| |||||||||||||||||||||||||    
T  10657253 tgagtaaatagtcaatttcccc-cctgaaattgtaagtttcgtcaatt 10657207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 209 - 256
Target Start/End: Original strand, 11652851 - 11652897
Alignment:
Q  209 tgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    ||||||||||| |||||| ||| |||||||||||||||||||||||||    
T  11652851 tgagtaaatagacaattatccc-cctgaaattgtaagtttcgtcaatt 11652897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 210 - 256
Target Start/End: Original strand, 19961513 - 19961557
Alignment:
Q  210 gagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    ||||||||| |||||||||||  ||||||||||||||||||||||||    
T  19961513 gagtaaataagcaattacccc--ctgaaattgtaagtttcgtcaatt 19961557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 209 - 256
Target Start/End: Complemental strand, 34503731 - 34503685
Alignment:
Q  209 tgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    ||||||||||| |||||||||| ||||||||| |||||||||||||||    
T  34503731 tgagtaaatagacaattacccc-cctgaaattttaagtttcgtcaatt 34503685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 209 - 256
Target Start/End: Complemental strand, 35236032 - 35235985
Alignment:
Q  209 tgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    ||||||||||| |||||||||| | ||||||||||||||| |||||||    
T  35236032 tgagtaaatagtcaattaccccccttgaaattgtaagttttgtcaatt 35235985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 209 - 256
Target Start/End: Complemental strand, 40515035 - 40514989
Alignment:
Q  209 tgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    |||||||||||||||||||  | |||||||||||||||||||||||||    
T  40515035 tgagtaaataggcaattacttc-cctgaaattgtaagtttcgtcaatt 40514989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 209 - 256
Target Start/End: Complemental strand, 50672714 - 50672668
Alignment:
Q  209 tgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    |||||||||||||||||| || || |||||||||||||||||||||||    
T  50672714 tgagtaaataggcaattatcc-tcttgaaattgtaagtttcgtcaatt 50672668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 210 - 256
Target Start/End: Complemental strand, 52395249 - 52395205
Alignment:
Q  210 gagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    ||||||||||||||| |||  ||||||||||||||||||||||||||    
T  52395249 gagtaaataggcaataacc--tcctgaaattgtaagtttcgtcaatt 52395205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 210 - 256
Target Start/End: Complemental strand, 2445335 - 2445290
Alignment:
Q  210 gagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    ||||||||||||||||| | | |||||||||||||||||||||||||    
T  2445335 gagtaaataggcaattatctc-cctgaaattgtaagtttcgtcaatt 2445290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 208 - 254
Target Start/End: Original strand, 14509170 - 14509215
Alignment:
Q  208 ttgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaa 254  Q
    |||||||||||| |||||||||| || ||||||||||||||||||||    
T  14509170 ttgagtaaatagtcaattaccccccc-gaaattgtaagtttcgtcaa 14509215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 211 - 256
Target Start/End: Complemental strand, 20189639 - 20189596
Alignment:
Q  211 agtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    ||||||||||||||||||||  ||||||||||||||||| ||||||    
T  20189639 agtaaataggcaattacccc--ctgaaattgtaagtttcatcaatt 20189596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 210 - 256
Target Start/End: Complemental strand, 37117262 - 37117217
Alignment:
Q  210 gagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    |||||||||||||||||||||| |||||||||||  |||||||||||    
T  37117262 gagtaaataggcaattacccct-ctgaaattgtatatttcgtcaatt 37117217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 210 - 256
Target Start/End: Complemental strand, 45258806 - 45258761
Alignment:
Q  210 gagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    |||||||||| |||||||| | |||||||||||||||||||||||||    
T  45258806 gagtaaatagccaattacctc-cctgaaattgtaagtttcgtcaatt 45258761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 210 - 256
Target Start/End: Complemental strand, 53628328 - 53628283
Alignment:
Q  210 gagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    |||||||||||||||||||||  ||||||||||||||||||| ||||    
T  53628328 gagtaaataggcaattacccc-actgaaattgtaagtttcgttaatt 53628283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 207 - 256
Target Start/End: Complemental strand, 23781856 - 23781808
Alignment:
Q  207 tttgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    ||||||||||||| ||||| |||| |||||||||||||||||| ||||||    
T  23781856 tttgagtaaatagtcaatttcccc-cctgaaattgtaagtttcatcaatt 23781808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 207 - 256
Target Start/End: Complemental strand, 25068432 - 25068384
Alignment:
Q  207 tttgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    ||||||||||||| ||||| ||| ||||||||||||||||||| ||||||    
T  25068432 tttgagtaaatagtcaatttccc-tcctgaaattgtaagtttcatcaatt 25068384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 207 - 256
Target Start/End: Complemental strand, 40279271 - 40279223
Alignment:
Q  207 tttgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    ||||||||||||| ||||| |||| | |||||||||||||||||||||||    
T  40279271 tttgagtaaatagtcaatttcccc-cttgaaattgtaagtttcgtcaatt 40279223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 207 - 256
Target Start/End: Original strand, 45969315 - 45969363
Alignment:
Q  207 tttgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    ||||||||||||| ||||| |||| ||||||||||||||||| |||||||    
T  45969315 tttgagtaaatagtcaatttcccc-cctgaaattgtaagttttgtcaatt 45969363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 211 - 256
Target Start/End: Original strand, 54492715 - 54492759
Alignment:
Q  211 agtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    |||||||||||||||||| | | |||||||||||||||||||||||    
T  54492715 agtaaataggcaattacctc-cttgaaattgtaagtttcgtcaatt 54492759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 210 - 254
Target Start/End: Original strand, 1136240 - 1136283
Alignment:
Q  210 gagtaaataggcaattacccctcctgaaattgtaagtttcgtcaa 254  Q
    |||||||||| |||||||||| ||||||||||||| |||||||||    
T  1136240 gagtaaatagtcaattacccc-cctgaaattgtaactttcgtcaa 1136283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 213 - 256
Target Start/End: Original strand, 6756551 - 6756592
Alignment:
Q  213 taaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    |||||||||||||||||| |  ||||||||||||||||||||||    
T  6756551 taaataggcaattacccccc--gaaattgtaagtttcgtcaatt 6756592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 208 - 256
Target Start/End: Complemental strand, 13342475 - 13342428
Alignment:
Q  208 ttgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    |||||||||||| ||||| |||| |||||||||||||||||| ||||||    
T  13342475 ttgagtaaatagtcaatttcccc-cctgaaattgtaagtttcatcaatt 13342428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 209 - 256
Target Start/End: Original strand, 24782086 - 24782131
Alignment:
Q  209 tgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    ||||||||||| ||||||||  | ||||||||||||||||||||||||    
T  24782086 tgagtaaatagtcaattacc--ttctgaaattgtaagtttcgtcaatt 24782131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 208 - 256
Target Start/End: Original strand, 33980407 - 33980454
Alignment:
Q  208 ttgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    |||||||||||| ||||| |||| ||||||||| |||||||||||||||    
T  33980407 ttgagtaaatagtcaatttcccc-cctgaaattataagtttcgtcaatt 33980454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 211 - 255
Target Start/End: Complemental strand, 35236075 - 35236032
Alignment:
Q  211 agtaaataggcaattacccctcctgaaattgtaagtttcgtcaat 255  Q
    |||||||||||||||||| ||| ||||||||||| ||||||||||    
T  35236075 agtaaataggcaattacctctc-tgaaattgtaaatttcgtcaat 35236032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 208 - 256
Target Start/End: Complemental strand, 36791852 - 36791805
Alignment:
Q  208 ttgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    |||||||||||| ||||| |||| |||||||||||||||||| ||||||    
T  36791852 ttgagtaaatagtcaatttcccc-cctgaaattgtaagtttcatcaatt 36791805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 208 - 256
Target Start/End: Complemental strand, 40783529 - 40783482
Alignment:
Q  208 ttgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    |||||||||||| ||||| |||||| |||||||||||||||| ||||||    
T  40783529 ttgagtaaatagtcaatttcccctc-tgaaattgtaagtttcatcaatt 40783482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 210 - 254
Target Start/End: Original strand, 49724626 - 49724669
Alignment:
Q  210 gagtaaataggcaattacccctcctgaaattgtaagtttcgtcaa 254  Q
    |||||||||| |||||||||| ||||||||||||| |||||||||    
T  49724626 gagtaaatagtcaattacccc-cctgaaattgtaattttcgtcaa 49724669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 210 - 254
Target Start/End: Complemental strand, 49726101 - 49726058
Alignment:
Q  210 gagtaaataggcaattacccctcctgaaattgtaagtttcgtcaa 254  Q
    |||||||||| |||||||||| ||||||||||||| |||||||||    
T  49726101 gagtaaatagtcaattacccc-cctgaaattgtaactttcgtcaa 49726058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 210 - 256
Target Start/End: Complemental strand, 50314571 - 50314528
Alignment:
Q  210 gagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    ||||||||| ||||||||||||   ||||||||||||||||||||||    
T  50314571 gagtaaataagcaattacccct---gaaattgtaagtttcgtcaatt 50314528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 210 - 254
Target Start/End: Complemental strand, 52118378 - 52118335
Alignment:
Q  210 gagtaaataggcaattacccctcctgaaattgtaagtttcgtcaa 254  Q
    |||||||||| |||||||||| ||||||||||||| |||||||||    
T  52118378 gagtaaatagtcaattacccc-cctgaaattgtaactttcgtcaa 52118335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 210 - 254
Target Start/End: Original strand, 52946366 - 52946409
Alignment:
Q  210 gagtaaataggcaattacccctcctgaaattgtaagtttcgtcaa 254  Q
    |||||||||| |||||||||| ||||||||||||| |||||||||    
T  52946366 gagtaaatagtcaattacccc-cctgaaattgtaactttcgtcaa 52946409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 210 - 254
Target Start/End: Complemental strand, 52947901 - 52947858
Alignment:
Q  210 gagtaaataggcaattacccctcctgaaattgtaagtttcgtcaa 254  Q
    |||||||||| |||||||||| ||||||||||||| |||||||||    
T  52947901 gagtaaatagtcaattacccc-cctgaaattgtaactttcgtcaa 52947858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 205 - 256
Target Start/End: Original strand, 54602154 - 54602203
Alignment:
Q  205 tatttgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    ||||||||||||||| |||||| |||  |||||| |||||||||||||||||    
T  54602154 tatttgagtaaatagtcaattatccc--ctgaaactgtaagtttcgtcaatt 54602203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 209 - 256
Target Start/End: Complemental strand, 54801334 - 54801289
Alignment:
Q  209 tgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    ||||||||||||||| ||||  |||||||||| |||||||||||||||    
T  54801334 tgagtaaataggcaactacc--tcctgaaattataagtttcgtcaatt 54801289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 209 - 256
Target Start/End: Original strand, 55481337 - 55481382
Alignment:
Q  209 tgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    ||||||||||| ||||||||||  || |||||||||||||||||||||    
T  55481337 tgagtaaatagacaattacccc--cttaaattgtaagtttcgtcaatt 55481382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 210 - 256
Target Start/End: Complemental strand, 43501 - 43456
Alignment:
Q  210 gagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||    
T  43501 gagtaaataggcaattacccc-cctgaaattgtaagtttcgtcaatt 43456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 206 - 256
Target Start/End: Original strand, 41321 - 41370
Alignment:
Q  206 atttgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    ||||||||||||||| |||||||| || |||||||||||||||||||||||    
T  41321 atttgagtaaataggtaattaccc-tcttgaaattgtaagtttcgtcaatt 41370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0340 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0340
Description:

Target: scaffold0340; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 209 - 256
Target Start/End: Original strand, 1330 - 1376
Alignment:
Q  209 tgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    ||||||||||| |||||||||| |||||||||||||||||||||||||    
T  1330 tgagtaaatagtcaattacccc-cctgaaattgtaagtttcgtcaatt 1376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 36; Significance: 0.00000000002; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 209 - 256
Target Start/End: Original strand, 38713362 - 38713408
Alignment:
Q  209 tgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    |||||||||||||||||||||| ||| |||||||||||||||||||||    
T  38713362 tgagtaaataggcaattacccc-cctcaaattgtaagtttcgtcaatt 38713408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 210 - 256
Target Start/End: Complemental strand, 6870179 - 6870133
Alignment:
Q  210 gagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    ||||||||||||||||||| | |||||||||||||||||| ||||||    
T  6870179 gagtaaataggcaattacctcccctgaaattgtaagtttcatcaatt 6870133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 210 - 256
Target Start/End: Original strand, 9736109 - 9736155
Alignment:
Q  210 gagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    ||||||||||||||||| ||||  |||||||||||||||||||||||    
T  9736109 gagtaaataggcaattatccctattgaaattgtaagtttcgtcaatt 9736155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 210 - 256
Target Start/End: Original strand, 21558761 - 21558806
Alignment:
Q  210 gagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    ||||||||||||||||||||| ||||||| |||||||||||||||||    
T  21558761 gagtaaataggcaattacccc-cctgaaaatgtaagtttcgtcaatt 21558806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 210 - 256
Target Start/End: Complemental strand, 33853070 - 33853025
Alignment:
Q  210 gagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    |||||||||||||||||||||| ||||||||||||||||||| ||||    
T  33853070 gagtaaataggcaattacccct-ctgaaattgtaagtttcgttaatt 33853025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 209 - 254
Target Start/End: Original strand, 36251815 - 36251858
Alignment:
Q  209 tgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaa 254  Q
    |||||||||||||||||||||||  |||||||||||||||||||||    
T  36251815 tgagtaaataggcaattacccct--tgaaattgtaagtttcgtcaa 36251858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 210 - 256
Target Start/End: Original strand, 39132733 - 39132778
Alignment:
Q  210 gagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    ||||||||||||||||||||| |||||||||||||||||| ||||||    
T  39132733 gagtaaataggcaattacccc-cctgaaattgtaagtttcatcaatt 39132778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 210 - 256
Target Start/End: Original strand, 40449826 - 40449871
Alignment:
Q  210 gagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    |||||||||| |||||||||| |||||||||||||||||||||||||    
T  40449826 gagtaaatagtcaattacccc-cctgaaattgtaagtttcgtcaatt 40449871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 208 - 256
Target Start/End: Complemental strand, 3178646 - 3178599
Alignment:
Q  208 ttgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    |||||||||||| ||||| ||| ||||||||||||||||||||||||||    
T  3178646 ttgagtaaatagtcaatttccc-tcctgaaattgtaagtttcgtcaatt 3178599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 206 - 254
Target Start/End: Original strand, 14864968 - 14865015
Alignment:
Q  206 atttgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaa 254  Q
    |||||||||||||| |||||||||| ||||||||||||| |||||||||    
T  14864968 atttgagtaaatagtcaattacccc-cctgaaattgtaactttcgtcaa 14865015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 208 - 256
Target Start/End: Complemental strand, 17925350 - 17925303
Alignment:
Q  208 ttgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    ||||||||||||  ||||||||| |||||||||||||||||||||||||    
T  17925350 ttgagtaaatagtgaattacccc-cctgaaattgtaagtttcgtcaatt 17925303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 209 - 256
Target Start/End: Complemental strand, 36469264 - 36469219
Alignment:
Q  209 tgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    |||||||||||||||||||||  |||||||||||||||||| ||||||    
T  36469264 tgagtaaataggcaattaccc--cctgaaattgtaagtttcatcaatt 36469219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 208 - 256
Target Start/End: Complemental strand, 41578188 - 41578141
Alignment:
Q  208 ttgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    |||||||||||| ||||| |||| |||||||||||||||||||||||||    
T  41578188 ttgagtaaatagtcaatttcccc-cctgaaattgtaagtttcgtcaatt 41578141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 209 - 256
Target Start/End: Original strand, 3454631 - 3454677
Alignment:
Q  209 tgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    ||||||||||||||||||| || |||||||||||||||||| ||||||    
T  3454631 tgagtaaataggcaattactcc-cctgaaattgtaagtttcatcaatt 3454677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 210 - 256
Target Start/End: Complemental strand, 15602165 - 15602121
Alignment:
Q  210 gagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    |||||||||| ||||||||||  ||||||||||||||||||||||||    
T  15602165 gagtaaatagccaattacccc--ctgaaattgtaagtttcgtcaatt 15602121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 213 - 256
Target Start/End: Original strand, 15730501 - 15730543
Alignment:
Q  213 taaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    ||||||||||||||||| || |||||||||||||||||||||||    
T  15730501 taaataggcaattacccatc-tgaaattgtaagtttcgtcaatt 15730543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 210 - 256
Target Start/End: Original strand, 29731033 - 29731077
Alignment:
Q  210 gagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    |||||||||||||||| |||||  |||||||||||||||||||||||    
T  29731033 gagtaaataggcaattgcccct--tgaaattgtaagtttcgtcaatt 29731077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 209 - 256
Target Start/End: Original strand, 36507746 - 36507793
Alignment:
Q  209 tgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    ||||||||||| ||||| |||| |||||||||||||||||| ||||||    
T  36507746 tgagtaaatagtcaatttccccccctgaaattgtaagtttcatcaatt 36507793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 210 - 256
Target Start/End: Original strand, 44444809 - 44444853
Alignment:
Q  210 gagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    |||||||||| ||||||||||  ||||||||||||||||||||||||    
T  44444809 gagtaaatagtcaattacccc--ctgaaattgtaagtttcgtcaatt 44444853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 210 - 256
Target Start/End: Original strand, 25817 - 25862
Alignment:
Q  210 gagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    |||||||||| |||||| ||||| |||||||||||||||||||||||    
T  25817 gagtaaatagtcaattatccctc-tgaaattgtaagtttcgtcaatt 25862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 210 - 256
Target Start/End: Original strand, 4482367 - 4482412
Alignment:
Q  210 gagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    |||||||||| ||||| |||| |||||||||||||||||||||||||    
T  4482367 gagtaaatagtcaatttcccc-cctgaaattgtaagtttcgtcaatt 4482412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 210 - 256
Target Start/End: Original strand, 9114665 - 9114710
Alignment:
Q  210 gagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    |||||||||||||||||| |||  |||||||||||||||||||||||    
T  9114665 gagtaaataggcaattactccta-tgaaattgtaagtttcgtcaatt 9114710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 208 - 254
Target Start/End: Complemental strand, 11681684 - 11681639
Alignment:
Q  208 ttgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaa 254  Q
    |||||||||||| |||||||||| ||||||||||||| |||||||||    
T  11681684 ttgagtaaatagtcaattacccc-cctgaaattgtaactttcgtcaa 11681639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 210 - 256
Target Start/End: Complemental strand, 15633420 - 15633375
Alignment:
Q  210 gagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    ||||||||||| |||||||| | ||||||||||||||||||||||||    
T  15633420 gagtaaataggtaattaccc-tactgaaattgtaagtttcgtcaatt 15633375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 213 - 251
Target Start/End: Original strand, 24028224 - 24028261
Alignment:
Q  213 taaataggcaattacccctcctgaaattgtaagtttcgt 251  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  24028224 taaataggcaattacccc-cctgaaattgtaagtttcgt 24028261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 210 - 256
Target Start/End: Original strand, 31203870 - 31203915
Alignment:
Q  210 gagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    |||||||||| ||||| |||| |||||||||||||||||||||||||    
T  31203870 gagtaaatagtcaatttcccc-cctgaaattgtaagtttcgtcaatt 31203915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 211 - 256
Target Start/End: Complemental strand, 37429679 - 37429636
Alignment:
Q  211 agtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    |||||||||||||||||||||  |||||||||||||||||| ||||    
T  37429679 agtaaataggcaattacccct--tgaaattgtaagtttcgttaatt 37429636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 210 - 256
Target Start/End: Complemental strand, 44672097 - 44672052
Alignment:
Q  210 gagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    |||||||||| ||||| |||| |||||||||||||||||||||||||    
T  44672097 gagtaaatagtcaatttcccc-cctgaaattgtaagtttcgtcaatt 44672052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 208 - 253
Target Start/End: Complemental strand, 5691607 - 5691562
Alignment:
Q  208 ttgagtaaataggcaattacccctcctgaaattgtaagtttcgtca 253  Q
    |||||||||||| ||||||||||   ||||||||||||||||||||    
T  5691607 ttgagtaaatagacaattaccccctttgaaattgtaagtttcgtca 5691562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 208 - 256
Target Start/End: Complemental strand, 11180084 - 11180038
Alignment:
Q  208 ttgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    |||||||||||| | |||||||||  |||||||||||||||||||||||    
T  11180084 ttgagtaaatagacgattacccct--tgaaattgtaagtttcgtcaatt 11180038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 199 - 256
Target Start/End: Original strand, 15207431 - 15207487
Alignment:
Q  199 tattagtatttgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    |||||| |||||||||||||| ||||| | || |||||||||||||||||| ||||||    
T  15207431 tattaggatttgagtaaatagtcaatttctcc-cctgaaattgtaagtttcatcaatt 15207487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 209 - 256
Target Start/End: Original strand, 20165950 - 20165994
Alignment:
Q  209 tgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    ||||||||||| |||||||||||   ||||||||||||||||||||||    
T  20165950 tgagtaaatagtcaattacccct---gaaattgtaagtttcgtcaatt 20165994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 207 - 256
Target Start/End: Original strand, 24573269 - 24573317
Alignment:
Q  207 tttgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    ||||||||||||| ||||| ||| ||||||||||||||||||| ||||||    
T  24573269 tttgagtaaatagtcaatttccc-tcctgaaattgtaagtttcatcaatt 24573317  T

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Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 209 - 254
Target Start/End: Complemental strand, 35124741 - 35124697
Alignment:
Q  209 tgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaa 254  Q
    ||||||||||| |||||||||| ||||||||||||| |||||||||    
T  35124741 tgagtaaatagtcaattacccc-cctgaaattgtaactttcgtcaa 35124697  T

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Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 208 - 256
Target Start/End: Complemental strand, 39133384 - 39133338
Alignment:
Q  208 ttgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    |||||||||||||||||||  ||| |||||||||||| |||||||||||    
T  39133384 ttgagtaaataggcaatta--ccttctgaaattgtaaatttcgtcaatt 39133338  T

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Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 207 - 256
Target Start/End: Original strand, 39324457 - 39324505
Alignment:
Q  207 tttgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    ||||||||||||| ||||| |||| |||||||||||||||||| ||||||    
T  39324457 tttgagtaaatagtcaatttcccc-cctgaaattgtaagtttcatcaatt 39324505  T

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Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 210 - 254
Target Start/End: Original strand, 11680170 - 11680213
Alignment:
Q  210 gagtaaataggcaattacccctcctgaaattgtaagtttcgtcaa 254  Q
    |||||||||| ||||||||| |||||||||||||| |||||||||    
T  11680170 gagtaaatagtcaattaccc-tcctgaaattgtaactttcgtcaa 11680213  T

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Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 208 - 256
Target Start/End: Original strand, 14053186 - 14053233
Alignment:
Q  208 ttgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    |||||||||||| ||||| ||| ||||||||||||||||||| ||||||    
T  14053186 ttgagtaaatagtcaatttccc-tcctgaaattgtaagtttcatcaatt 14053233  T

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Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 96 - 179
Target Start/End: Complemental strand, 27327097 - 27327013
Alignment:
Q  96 tacaataatgtactatttttccttctctagaattttcttcca----ttttttctcatggtatagttttagtaagtcatatcattaatg 179  Q
    ||||| ||||||||||||||||||   |||||||||||||||    |||||| ||| |||| | ||||| |||||| |||||||||||    
T  27327097 tacaagaatgtactatttttcctt---tagaattttcttccatttcttttttttcacggtaaaattttaataagtcgtatcattaatg 27327013  T

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Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 208 - 256
Target Start/End: Complemental strand, 43285059 - 43285012
Alignment:
Q  208 ttgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    |||||||||||| ||||| ||| ||||||||||||||||||| ||||||    
T  43285059 ttgagtaaatagtcaatttccc-tcctgaaattgtaagtttcatcaatt 43285012  T

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Target: scaffold0083 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 210 - 256
Target Start/End: Original strand, 3225 - 3271
Alignment:
Q  210 gagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    |||||||||||| |||||||| |||||||||||||||||||| ||||    
T  3225 gagtaaataggccattaccccccctgaaattgtaagtttcgtaaatt 3271  T

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Target: scaffold0008 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 207 - 256
Target Start/End: Original strand, 239159 - 239207
Alignment:
Q  207 tttgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    |||||||||||||||||||||| | |||||||||||||||||||| ||||    
T  239159 tttgagtaaataggcaattacctc-cctgaaattgtaagtttcgttaatt 239207  T

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Target: scaffold0945 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0945
Description:

Target: scaffold0945; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 208 - 256
Target Start/End: Original strand, 1161 - 1208
Alignment:
Q  208 ttgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    |||||||||| |||||||||||| | |||||||||||||||||||||||    
T  1161 ttgagtaaattggcaattacccc-cgtgaaattgtaagtttcgtcaatt 1208  T

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Target: scaffold0044 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 209 - 256
Target Start/End: Complemental strand, 59756 - 59711
Alignment:
Q  209 tgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    |||||||||||| |||||||||  ||||||||||||||||||||||||    
T  59756 tgagtaaataggtaattacccc--ctgaaattgtaagtttcgtcaatt 59711  T

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Target: scaffold0015 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 200 - 256
Target Start/End: Complemental strand, 42622 - 42567
Alignment:
Q  200 attagtatttgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    |||| ||||||||||||||| ||||| |||| |||||||||||| ||||||||||||    
T  42622 attattatttgagtaaatagtcaatttcccc-cctgaaattgtaggtttcgtcaatt 42567  T

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Target: scaffold0060 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 209 - 256
Target Start/End: Original strand, 66584 - 66630
Alignment:
Q  209 tgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    ||||||||||| ||||||| || |||||||||||||||||||||||||    
T  66584 tgagtaaatagtcaattacacc-cctgaaattgtaagtttcgtcaatt 66630  T

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Target: scaffold1063 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold1063
Description:

Target: scaffold1063; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 210 - 256
Target Start/End: Original strand, 252 - 297
Alignment:
Q  210 gagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    |||||||||||||||||||||| ||| |||||||||||| |||||||    
T  252 gagtaaataggcaattacccct-ctggaattgtaagttttgtcaatt 297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 210 - 256
Target Start/End: Complemental strand, 35132 - 35087
Alignment:
Q  210 gagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    |||||||||||||| |||||| ||||||||||||||| |||||||||    
T  35132 gagtaaataggcaaatacccc-cctgaaattgtaagtgtcgtcaatt 35087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 211 - 256
Target Start/End: Original strand, 10550 - 10594
Alignment:
Q  211 agtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    ||||| ||||||||||||| ||||||||||||| ||||||||||||    
T  10550 agtaagtaggcaattaccc-tcctgaaattgtatgtttcgtcaatt 10594  T

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Target: scaffold0103 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 208 - 256
Target Start/End: Complemental strand, 27672 - 27625
Alignment:
Q  208 ttgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    ||||||||||||||||||||||| | ||||| ||||||||| |||||||    
T  27672 ttgagtaaataggcaattacccc-catgaaactgtaagttttgtcaatt 27625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 208 - 256
Target Start/End: Original strand, 12289 - 12336
Alignment:
Q  208 ttgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    |||||||||||| ||||| ||| ||||||||||||||||||| ||||||    
T  12289 ttgagtaaatagtcaatttccc-tcctgaaattgtaagtttcatcaatt 12336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 208 - 256
Target Start/End: Original strand, 185595 - 185642
Alignment:
Q  208 ttgagtaaataggcaattacccctcctgaaattgtaagtttcgtcaatt 256  Q
    |||||||||||| ||||| |||| |||||||||||||||||| ||||||    
T  185595 ttgagtaaatagtcaatttcccc-cctgaaattgtaagtttcatcaatt 185642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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