View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20435_high_60 (Length: 212)
Name: NF20435_high_60
Description: NF20435
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20435_high_60 |
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Alignment Details
Target: chr1 (Bit Score: 147; Significance: 1e-77; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 43 - 193
Target Start/End: Complemental strand, 33306945 - 33306795
Alignment:
| Q |
43 |
cctattcattataaataagcataagttcaatttggttaataaatcaagtatatgtaactatatttgtaacatgactaaactacaacattctttgttattt |
142 |
Q |
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| T |
33306945 |
cctattcattataaataagcataagttcaatttggttaataaatcaagtatatgtaactatctttgtaacatgactaaactacaacattctttgttattt |
33306846 |
T |
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| Q |
143 |
agatggttctattggtaaagccatccgcttcacgctggctgcctccttagc |
193 |
Q |
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| T |
33306845 |
agatggttctattggtaaagccatccgcttcacgctggctgcctccttagc |
33306795 |
T |
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