View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20435_low_11 (Length: 468)

Name: NF20435_low_11
Description: NF20435
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20435_low_11
NF20435_low_11
[»] chr3 (49 HSPs)
chr3 (192-451)||(23287532-23287793)
chr3 (212-451)||(13105064-13105305)
chr3 (192-451)||(14880716-14880977)
chr3 (192-449)||(14892531-14892790)
chr3 (212-451)||(9524840-9525081)
chr3 (192-451)||(68552-68813)
chr3 (192-451)||(74645-74906)
chr3 (212-451)||(11181168-11181407)
chr3 (212-451)||(4313017-4313257)
chr3 (212-451)||(8606559-8606799)
chr3 (212-451)||(8613020-8613260)
chr3 (192-451)||(48060135-48060395)
chr3 (212-451)||(9554515-9554757)
chr3 (212-451)||(261756-261996)
chr3 (212-451)||(21637983-21638223)
chr3 (212-451)||(37468425-37468666)
chr3 (222-451)||(16030750-16030981)
chr3 (204-451)||(41015752-41016006)
chr3 (204-451)||(41006972-41007227)
chr3 (212-451)||(17934472-17934710)
chr3 (222-451)||(8154075-8154308)
chr3 (212-451)||(13111221-13111446)
chr3 (222-451)||(26386141-26386373)
chr3 (237-451)||(16815302-16815513)
chr3 (259-451)||(14887501-14887693)
chr3 (244-451)||(35491434-35491650)
chr3 (192-401)||(44362931-44363140)
chr3 (212-342)||(12558360-12558491)
chr3 (224-328)||(16983460-16983564)
chr3 (224-327)||(14398023-14398126)
chr3 (224-328)||(48431795-48431899)
chr3 (224-328)||(4662663-4662767)
chr3 (247-328)||(48435379-48435461)
chr3 (396-451)||(12480228-12480284)
chr3 (23-56)||(4312861-4312894)
chr3 (23-56)||(8153907-8153940)
chr3 (23-56)||(9524635-9524668)
chr3 (23-56)||(11182220-11182253)
chr3 (23-56)||(13104891-13104924)
chr3 (23-56)||(13111048-13111081)
chr3 (23-56)||(14880548-14880581)
chr3 (23-56)||(14887069-14887102)
chr3 (23-56)||(14892362-14892395)
chr3 (23-56)||(23281306-23281339)
chr3 (23-56)||(23287393-23287426)
chr3 (23-56)||(41007358-41007391)
chr3 (23-56)||(41016137-41016170)
chr3 (20-56)||(68948-68984)
chr3 (20-56)||(75041-75077)
[»] scaffold0039 (2 HSPs)
scaffold0039 (193-451)||(89273-89533)
scaffold0039 (23-56)||(89121-89154)
[»] chr4 (30 HSPs)
chr4 (192-451)||(50188191-50188451)
chr4 (212-451)||(19737432-19737673)
chr4 (212-451)||(3381863-3382103)
chr4 (212-451)||(39744849-39745089)
chr4 (216-451)||(3388613-3388849)
chr4 (212-451)||(8093702-8093944)
chr4 (212-451)||(8102507-8102749)
chr4 (225-451)||(55792670-55792897)
chr4 (243-451)||(20548777-20548987)
chr4 (237-451)||(38853759-38853976)
chr4 (283-451)||(8657896-8658066)
chr4 (202-373)||(8816927-8817097)
chr4 (192-402)||(18482783-18482994)
chr4 (224-327)||(20513605-20513708)
chr4 (224-329)||(40684354-40684459)
chr4 (226-328)||(16595461-16595563)
chr4 (237-326)||(33722403-33722493)
chr4 (226-326)||(55081196-55081296)
chr4 (238-327)||(2574831-2574921)
chr4 (224-402)||(12613649-12613827)
chr4 (224-294)||(15019995-15020065)
chr4 (283-329)||(39991422-39991468)
chr4 (289-328)||(15017507-15017546)
chr4 (23-56)||(3381691-3381724)
chr4 (23-56)||(3388436-3388469)
chr4 (23-56)||(8093515-8093548)
chr4 (23-56)||(8102320-8102353)
chr4 (23-56)||(19737246-19737279)
chr4 (23-56)||(38854131-38854164)
chr4 (23-56)||(39744663-39744696)
[»] chr8 (27 HSPs)
chr8 (192-451)||(39845014-39845275)
chr8 (192-451)||(39836972-39837233)
chr8 (193-451)||(32000167-32000427)
chr8 (212-451)||(25858690-25858931)
chr8 (212-451)||(22156408-22156648)
chr8 (222-451)||(32007136-32007367)
chr8 (213-451)||(32025074-32025313)
chr8 (212-451)||(22162414-22162651)
chr8 (204-451)||(30938697-30938948)
chr8 (237-397)||(13386083-13386243)
chr8 (224-328)||(2470474-2470579)
chr8 (331-451)||(25852562-25852684)
chr8 (238-373)||(21640609-21640744)
chr8 (238-328)||(4543787-4543878)
chr8 (224-328)||(19954771-19954875)
chr8 (224-327)||(19950317-19950420)
chr8 (208-275)||(25852494-25852561)
chr8 (238-281)||(27235897-27235940)
chr8 (224-326)||(30779350-30779451)
chr8 (224-329)||(34517697-34517802)
chr8 (9-56)||(13386379-13386426)
chr8 (9-56)||(13386632-13386679)
chr8 (23-56)||(25858514-25858547)
chr8 (23-56)||(30939079-30939112)
chr8 (23-56)||(32024886-32024919)
chr8 (23-56)||(39836803-39836836)
chr8 (23-56)||(39844845-39844878)
[»] chr6 (39 HSPs)
chr6 (192-451)||(25505932-25506193)
chr6 (195-451)||(26896850-26897107)
chr6 (212-451)||(19899356-19899596)
chr6 (212-451)||(19720244-19720484)
chr6 (192-451)||(22778526-22778784)
chr6 (193-451)||(12666942-12667199)
chr6 (193-449)||(18909489-18909744)
chr6 (193-451)||(20452053-20452312)
chr6 (193-451)||(20458870-20459129)
chr6 (192-451)||(22764277-22764535)
chr6 (204-451)||(35091082-35091330)
chr6 (193-451)||(22232012-22232272)
chr6 (212-451)||(3917014-3917259)
chr6 (212-451)||(10984497-10984742)
chr6 (212-451)||(30823947-30824191)
chr6 (222-447)||(28702320-28702547)
chr6 (283-449)||(19714090-19714257)
chr6 (192-359)||(29600837-29601002)
chr6 (224-329)||(14042142-14042247)
chr6 (222-318)||(7245001-7245097)
chr6 (193-373)||(28002323-28002506)
chr6 (239-373)||(28969491-28969626)
chr6 (238-328)||(32814563-32814654)
chr6 (384-451)||(7245112-7245180)
chr6 (224-328)||(35130124-35130228)
chr6 (227-329)||(14776044-14776146)
chr6 (212-253)||(19714248-19714289)
chr6 (9-56)||(7244797-7244848)
chr6 (192-234)||(12663244-12663286)
chr6 (222-298)||(2699562-2699639)
chr6 (23-56)||(12663422-12663455)
chr6 (23-56)||(12666790-12666823)
chr6 (23-56)||(19714442-19714475)
chr6 (23-56)||(19720637-19720670)
chr6 (23-56)||(25505763-25505796)
chr6 (23-56)||(26897263-26897296)
chr6 (23-56)||(29600666-29600699)
chr6 (23-56)||(30823760-30823793)
chr6 (207-235)||(12663228-12663256)
[»] chr5 (44 HSPs)
chr5 (212-451)||(25533268-25533509)
chr5 (192-451)||(28844335-28844596)
chr5 (192-451)||(28852945-28853206)
chr5 (192-451)||(20639264-20639525)
chr5 (212-451)||(36455034-36455275)
chr5 (212-451)||(25526586-25526826)
chr5 (212-451)||(36448650-36448891)
chr5 (208-451)||(40015297-40015542)
chr5 (192-451)||(24964700-24964960)
chr5 (192-451)||(24956240-24956499)
chr5 (212-451)||(37048763-37049004)
chr5 (222-451)||(30249720-30249951)
chr5 (212-451)||(43597473-43597715)
chr5 (212-451)||(43630267-43630509)
chr5 (212-451)||(20099069-20099309)
chr5 (212-451)||(23377721-23377961)
chr5 (193-451)||(20092171-20092432)
chr5 (192-451)||(23349480-23349743)
chr5 (226-451)||(25041702-25041929)
chr5 (222-451)||(26186079-26186310)
chr5 (225-451)||(15956431-15956658)
chr5 (212-451)||(1727585-1727828)
chr5 (193-399)||(10058233-10058439)
chr5 (222-404)||(38227374-38227555)
chr5 (227-314)||(16563759-16563847)
chr5 (224-328)||(18264997-18265102)
chr5 (246-329)||(1285748-1285832)
chr5 (238-329)||(16747721-16747813)
chr5 (252-403)||(13358852-13359003)
chr5 (23-56)||(1727398-1727431)
chr5 (23-56)||(15956260-15956293)
chr5 (23-56)||(20098915-20098948)
chr5 (23-56)||(20639094-20639127)
chr5 (23-56)||(23349310-23349343)
chr5 (23-56)||(23377549-23377582)
chr5 (23-56)||(24956071-24956104)
chr5 (23-56)||(24964531-24964564)
chr5 (23-56)||(25526979-25527012)
chr5 (23-56)||(25533663-25533696)
chr5 (23-56)||(36449031-36449064)
chr5 (23-56)||(36455415-36455448)
chr5 (23-56)||(43597287-43597320)
chr5 (23-56)||(43630081-43630114)
chr5 (222-298)||(4872451-4872527)
[»] chr2 (38 HSPs)
chr2 (192-451)||(42565338-42565599)
chr2 (192-451)||(42573962-42574223)
chr2 (192-451)||(15952462-15952723)
chr2 (212-451)||(17708-17948)
chr2 (192-451)||(35139008-35139269)
chr2 (192-451)||(35147344-35147605)
chr2 (212-451)||(5870531-5870771)
chr2 (212-451)||(5873673-5873913)
chr2 (212-451)||(11874097-11874337)
chr2 (212-451)||(15943967-15944208)
chr2 (222-451)||(24690495-24690726)
chr2 (212-451)||(38083943-38084183)
chr2 (222-451)||(18972532-18972761)
chr2 (222-451)||(41233262-41233494)
chr2 (193-451)||(19883841-19884099)
chr2 (212-451)||(18500634-18500867)
chr2 (293-451)||(36735725-36735885)
chr2 (212-318)||(40386525-40386632)
chr2 (227-373)||(14105085-14105231)
chr2 (238-333)||(45031667-45031763)
chr2 (227-329)||(17254869-17254970)
chr2 (224-369)||(44956999-44957144)
chr2 (212-266)||(36735885-36735939)
chr2 (237-327)||(13059975-13060064)
chr2 (373-451)||(40386688-40386767)
chr2 (23-56)||(11874504-11874537)
chr2 (23-56)||(15943782-15943815)
chr2 (23-56)||(15952293-15952326)
chr2 (23-56)||(18500989-18501022)
chr2 (23-56)||(19883695-19883728)
chr2 (23-56)||(35139405-35139438)
chr2 (23-56)||(35147746-35147779)
chr2 (23-56)||(36736079-36736112)
chr2 (23-56)||(38083757-38083790)
chr2 (23-56)||(41233095-41233128)
chr2 (23-56)||(42565169-42565202)
chr2 (23-56)||(42573793-42573826)
chr2 (20-56)||(24690877-24690913)
[»] chr7 (37 HSPs)
chr7 (212-451)||(28415532-28415772)
chr7 (192-451)||(18303792-18304053)
chr7 (195-451)||(46299328-46299585)
chr7 (225-451)||(6851447-6851675)
chr7 (225-451)||(1858006-1858234)
chr7 (207-451)||(13831893-13832139)
chr7 (207-451)||(13839923-13840169)
chr7 (192-451)||(34138546-34138797)
chr7 (192-451)||(20542305-20542564)
chr7 (204-451)||(12978870-12979121)
chr7 (223-451)||(46461550-46461780)
chr7 (237-451)||(44412760-44412977)
chr7 (193-451)||(34132236-34132485)
chr7 (272-446)||(4831828-4832005)
chr7 (193-451)||(43005071-43005348)
chr7 (224-329)||(29477749-29477854)
chr7 (226-328)||(6897894-6897996)
chr7 (357-451)||(22347250-22347346)
chr7 (357-451)||(7528458-7528555)
chr7 (238-373)||(25831800-25831936)
chr7 (238-327)||(23615818-23615907)
chr7 (387-451)||(18156751-18156816)
chr7 (192-299)||(18156634-18156747)
chr7 (261-317)||(32158556-32158613)
chr7 (20-55)||(6644911-6644946)
chr7 (404-451)||(7528408-7528456)
chr7 (23-56)||(1857836-1857869)
chr7 (23-56)||(6851295-6851328)
chr7 (23-56)||(12979252-12979285)
chr7 (23-56)||(13832302-13832335)
chr7 (23-56)||(13840332-13840365)
chr7 (23-56)||(18303640-18303673)
chr7 (23-56)||(20542137-20542170)
chr7 (23-56)||(28415912-28415945)
chr7 (23-56)||(34132115-34132148)
chr7 (223-298)||(26286614-26286687)
chr7 (20-56)||(43004916-43004952)
[»] scaffold0119 (1 HSPs)
scaffold0119 (193-451)||(39619-39877)
[»] scaffold1699 (2 HSPs)
scaffold1699 (212-451)||(813-1054)
scaffold1699 (20-56)||(625-661)
[»] scaffold0016 (2 HSPs)
scaffold0016 (212-451)||(14504-14744)
scaffold0016 (23-56)||(14883-14916)
[»] chr1 (35 HSPs)
chr1 (192-451)||(19367865-19368125)
chr1 (222-451)||(2416135-2416366)
chr1 (222-451)||(20429759-20429991)
chr1 (204-451)||(31540369-31540619)
chr1 (204-451)||(31548938-31549188)
chr1 (212-451)||(44831974-44832215)
chr1 (213-451)||(15473289-15473529)
chr1 (226-451)||(51968331-51968560)
chr1 (222-451)||(47108775-47109006)
chr1 (225-451)||(3432337-3432562)
chr1 (224-329)||(12906640-12906745)
chr1 (224-329)||(36725206-36725311)
chr1 (237-373)||(2493269-2493406)
chr1 (238-373)||(23191469-23191605)
chr1 (228-329)||(33380420-33380521)
chr1 (224-328)||(19309102-19309206)
chr1 (224-327)||(31064454-31064557)
chr1 (224-325)||(8770103-8770204)
chr1 (238-327)||(25661349-25661439)
chr1 (226-314)||(27761347-27761435)
chr1 (227-373)||(28857508-28857656)
chr1 (238-329)||(9352802-9352894)
chr1 (212-267)||(47110352-47110407)
chr1 (238-329)||(9327956-9328048)
chr1 (9-56)||(44831793-44831840)
chr1 (254-328)||(24159307-24159382)
chr1 (224-297)||(9252831-9252904)
chr1 (23-56)||(2415998-2416031)
chr1 (23-56)||(3432182-3432215)
chr1 (23-56)||(20430134-20430167)
chr1 (23-56)||(31540750-31540783)
chr1 (23-56)||(31549319-31549352)
chr1 (23-56)||(47110577-47110610)
chr1 (20-56)||(2334601-2334637)
chr1 (24-56)||(19368261-19368293)
[»] scaffold0043 (2 HSPs)
scaffold0043 (194-451)||(32632-32890)
scaffold0043 (23-56)||(32467-32500)
[»] scaffold0301 (1 HSPs)
scaffold0301 (222-449)||(9308-9537)
[»] scaffold0028 (1 HSPs)
scaffold0028 (222-451)||(66210-66442)
[»] scaffold0027 (2 HSPs)
scaffold0027 (225-451)||(23989-24217)
scaffold0027 (23-56)||(24354-24387)
[»] scaffold0351 (1 HSPs)
scaffold0351 (192-451)||(7012-7276)
[»] scaffold0096 (2 HSPs)
scaffold0096 (212-382)||(805-975)
scaffold0096 (23-56)||(618-651)
[»] scaffold0306 (2 HSPs)
scaffold0306 (212-451)||(16050-16294)
scaffold0306 (23-56)||(16448-16481)
[»] scaffold0031 (1 HSPs)
scaffold0031 (195-399)||(33129-33332)
[»] scaffold0065 (1 HSPs)
scaffold0065 (195-451)||(43644-43903)
[»] scaffold0046 (1 HSPs)
scaffold0046 (297-451)||(86201-86357)
[»] scaffold0085 (2 HSPs)
scaffold0085 (222-342)||(18179-18299)
scaffold0085 (322-451)||(7323-7454)
[»] scaffold0226 (1 HSPs)
scaffold0226 (224-404)||(5679-5859)
[»] scaffold0018 (1 HSPs)
scaffold0018 (224-328)||(171207-171311)
[»] scaffold0009 (2 HSPs)
scaffold0009 (224-404)||(163804-163984)
scaffold0009 (224-307)||(148721-148804)
[»] scaffold0555 (1 HSPs)
scaffold0555 (224-404)||(4775-4952)
[»] scaffold0092 (1 HSPs)
scaffold0092 (212-299)||(14375-14462)
[»] scaffold0586 (1 HSPs)
scaffold0586 (239-329)||(5182-5272)
[»] scaffold0970 (1 HSPs)
scaffold0970 (23-56)||(20-53)


Alignment Details
Target: chr3 (Bit Score: 210; Significance: 1e-115; HSPs: 49)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 192 - 451
Target Start/End: Original strand, 23287532 - 23287793
Alignment:
Q  192 taccgaaggaacaaaattctgaagggacttattccgaagggacagaaaaaagagggagaagaaaagaatagctcgtcaacacaagctaaatagggagaag 291  Q
    ||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23287532 taccgaagggacaaaattccgaagggacttattccgaagggacagaaaaaagagggagaagaaaagaatagctcgtcaacacaagctaaatagggagaag 23287631  T
Q  292 agagaaaagttctttgacaactcaagataacttttggtctgtgaaattgtgagggatgagggctctatttataggtgaggaggttgatg-aagatggaaa 390  Q
    ||||||||||||||||||||||||||| |||||||||| |||||||||||| || |||||||||||||||||||||||||||||||||| || | |||||    
T  23287632 agagaaaagttctttgacaactcaagagaacttttggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaaaggaaa 23287731  T
Q  391 attggtttaatggaaatgatgaacaattatggtgaa-tttgaaaaaggaatgttaaagttga 451  Q
    ||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||    
T  23287732 attggtttaatggaaatgatggacaattatggtgaattttgaaaaaggaatgttaaagttga 23287793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 212 - 451
Target Start/End: Original strand, 13105064 - 13105305
Alignment:
Q  212 gaagggacttattccgaagggacagaaaaaagagggagaagaaaagaatagctcgtcaacacaagctaaatagggagaagagagaaaagttctttgacaa 311  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  13105064 gaagggacttattccgaagggacagaaaaaagagggagaagaaaagaatagctcgtcaacacaagctaaagagggagaagagagaaaagttctttgacaa 13105163  T
Q  312 ctcaagataacttttggtctgtgaaattgtgagggatgagggctctatttataggtgaggaggttgatg-aagatggaaaattggtttaatggaaatgat 410  Q
    ||||||| |||||||||| |||||||||||| || |||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||    
T  13105164 ctcaagagaacttttggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaatggaaaattggtttaatggaaatgat 13105263  T
Q  411 gaacaattatggtgaa-tttgaaaaaggaatgttaaagttga 451  Q
    | |||||||||||||| |||||||||||||||||||||||||    
T  13105264 ggacaattatggtgaattttgaaaaaggaatgttaaagttga 13105305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 192 - 451
Target Start/End: Original strand, 14880716 - 14880977
Alignment:
Q  192 taccgaaggaacaaaattctgaagggacttattccgaagggacagaaaaaagagggagaagaaaagaatagctcgtcaacacaagctaaatagggagaag 291  Q
    ||||||||| | ||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  14880716 taccgaagggataaaattccgaagggacttattctgaagggacagaaaaaagagggagaagaaaagaatagctcgtcaacacaagctaaagagggagaag 14880815  T
Q  292 agagaaaagttctttgacaactcaagataacttttggtctgtgaaattgtgagggatgagggctctatttataggtgaggaggttgatg-aagatggaaa 390  Q
    ||||||||||||||||||||||||||| |||||||| | |||||||||||| || ||||| |||||||||||||||||||||||||||| || |||||||    
T  14880816 agagaaaagttctttgacaactcaagagaacttttgatgtgtgaaattgtgtggaatgagagctctatttataggtgaggaggttgatgaaaaatggaaa 14880915  T
Q  391 attggtttaatggaaatgatgaacaattatggtgaa-tttgaaaaaggaatgttaaagttga 451  Q
    ||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||    
T  14880916 attggtttaatggaaatgatggacaattatggtgaattttgaaaaaggaatgttaaagttga 14880977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 192 - 449
Target Start/End: Original strand, 14892531 - 14892790
Alignment:
Q  192 taccgaaggaacaaaattctgaagggacttattccgaagggacagaaaaaagagggagaagaaaagaatagctcgtcaacacaagctaaatagggagaag 291  Q
    |||| |||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  14892531 tacccaagggacaaaattccgaagggacttattccgaagggacagaaaaaagagggagaagaaaagaatagctcgtcaacacaagctaaagagggagaag 14892630  T
Q  292 agagaaaagttctttgacaactcaagataacttttggtctgtgaaattgtgagggatgagggctctatttataggtgaggaggttgatg-aagatggaaa 390  Q
    ||||||||||||||||||||||||||| |||||||| | |||||||||||| || ||||| |||||||||||||||||||||||||||| || |||||||    
T  14892631 agagaaaagttctttgacaactcaagagaacttttgatgtgtgaaattgtgtggaatgagagctctatttataggtgaggaggttgatgaaaaatggaaa 14892730  T
Q  391 attggtttaatggaaatgatgaacaattatggtgaa-tttgaaaaaggaatgttaaagtt 449  Q
    |||||||||||| |||||||| |||||||||||||| ||||||||||||||| |||||||    
T  14892731 attggtttaatgaaaatgatggacaattatggtgaattttgaaaaaggaatgctaaagtt 14892790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 212 - 451
Target Start/End: Original strand, 9524840 - 9525081
Alignment:
Q  212 gaagggacttattccgaagggacagaaaaaagagggagaagaaaagaatagctcgtcaacacaagctaaatagggagaagagagaaaagttctttgacaa 311  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9524840 gaagggacttattccgaagggacagaaaaaagagggagaagaaaagaatagctcgtcaacacaagctaaatagggagaagagagaaaagttctttgacaa 9524939  T
Q  312 ctcaagataacttttggtctgtgaaattgtgagggatgagggctctatttataggtgaggaggttgatg-aagatggaaaattggtttaatggaaatgat 410  Q
    ||||||| |||||||||| |||||||||||  || |||||||||||||||||||||||||||||||||| || | |||||||||||||||||||||||||    
T  9524940 ctcaagagaacttttggtgtgtgaaattgtatggaatgagggctctatttataggtgaggaggttgatgaaaaaaggaaaattggtttaatggaaatgat 9525039  T
Q  411 gaacaattatggtgaa-tttgaaaaaggaatgttaaagttga 451  Q
    | ||||||||||| || ||||||||| |||||||||||||||    
T  9525040 ggacaattatggtaaattttgaaaaatgaatgttaaagttga 9525081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 183; E-Value: 8e-99
Query Start/End: Original strand, 192 - 451
Target Start/End: Complemental strand, 68813 - 68552
Alignment:
Q  192 taccgaaggaacaaaattctgaagggacttattccgaagggacagaaaaaagagggagaagaaaagaatagctcgtcaacacaagctaaatagggagaag 291  Q
    ||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||    
T  68813 taccgaagggacaaaattccgaagggacttattccgaagggacagaaaaaagagggagaagaaaagaatagcttgtcaacacaagctaaaaagggagaag 68714  T
Q  292 agagaaaagttctttgacaactcaagataacttttggtctgtgaaattgtgagggatgagggctctatttataggtgaggaggttgatg-aagatggaaa 390  Q
    ||||||||||||||||||||||||||| |||||||||| |||||||||||| || ||||||||||||||||||||||||||| |||||| || | |||||    
T  68713 agagaaaagttctttgacaactcaagagaacttttggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggagtttgatgaaaaaaggaaa 68614  T
Q  391 attggtttaatggaaatgatgaacaattatggtgaa-tttgaaaaaggaatg-ttaaagttga 451  Q
    ||||||||||||||||||||| |||||||| ||||| ||||||||||||||| ||||||||||    
T  68613 attggtttaatggaaatgatggacaattat-gtgaattttgaaaaaggaatgtttaaagttga 68552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 183; E-Value: 8e-99
Query Start/End: Original strand, 192 - 451
Target Start/End: Complemental strand, 74906 - 74645
Alignment:
Q  192 taccgaaggaacaaaattctgaagggacttattccgaagggacagaaaaaagagggagaagaaaagaatagctcgtcaacacaagctaaatagggagaag 291  Q
    ||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||    
T  74906 taccgaagggacaaaattccgaagggacttattccgaagggacagaaaaaagagggagaagaaaagaatagcttgtcaacacaagctaaaaagggagaag 74807  T
Q  292 agagaaaagttctttgacaactcaagataacttttggtctgtgaaattgtgagggatgagggctctatttataggtgaggaggttgatg-aagatggaaa 390  Q
    ||||||||||||||||||||||||||| |||||||||| |||||||||||| || ||||||||||||||||||||||||||| |||||| || | |||||    
T  74806 agagaaaagttctttgacaactcaagagaacttttggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggagtttgatgaaaaaaggaaa 74707  T
Q  391 attggtttaatggaaatgatgaacaattatggtgaa-tttgaaaaaggaatg-ttaaagttga 451  Q
    ||||||||||||||||||||| |||||||| ||||| ||||||||||||||| ||||||||||    
T  74706 attggtttaatggaaatgatggacaattat-gtgaattttgaaaaaggaatgtttaaagttga 74645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 183; E-Value: 8e-99
Query Start/End: Original strand, 212 - 451
Target Start/End: Complemental strand, 11181407 - 11181168
Alignment:
Q  212 gaagggacttattccgaagggacagaaaaaagagggagaagaaaagaatagctcgtcaacacaagctaaatagggagaagagagaaaagttctttgacaa 311  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  11181407 gaagggacttattccgaagggacagaaaaaagagggagaagaaaagaatagctcgtcaacacaagctaaagagggagaagagagaaaagttctttgacaa 11181308  T
Q  312 ctcaagataacttttggtctgtgaaattgtgagggatgagggctctatttataggtgaggaggttgatgaag-atggaaaattggtttaatggaaatgat 410  Q
    |||  || |||||||||| |||||||||||| || ||||| ||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||    
T  11181307 ctc--gagaacttttggtgtgtgaaattgtgtggaatgagagctctatttataggtgaggaggttgatgaagaaaggaaaattggtttaatggaaatgat 11181210  T
Q  411 gaacaattatggtgaa-tttgaaaaaggaatgttaaagttga 451  Q
    | |||||||||||||| |||||||||||||||||||||||||    
T  11181209 ggacaattatggtgaattttgaaaaaggaatgttaaagttga 11181168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 182; E-Value: 3e-98
Query Start/End: Original strand, 212 - 451
Target Start/End: Original strand, 4313017 - 4313257
Alignment:
Q  212 gaagggacttattccgaagggacagaaaaaagagggagaagaaaagaatagctcgtcaacacaagctaaatagggagaagagagaaaagttctttgacaa 311  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||    
T  4313017 gaagggacttattccgaagggacagaaaaaagagggagaagaaaagaatagctcgtcaacacaagctaag-agggagaagagagaaaagttctttgacaa 4313115  T
Q  312 ctcaagataacttttggtctgtgaaattgtgagggatgagggctctatttataggtgaggaggttgatg-aagatggaaaattggtttaatggaaatgat 410  Q
    ||||| | |||||||||| ||| |||||||| || |||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||    
T  4313116 ctcaatagaacttttggtgtgtaaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaatggaaaattggtttaatggaaatgat 4313215  T
Q  411 gaacaattatggtgaa-tttgaaaaaggaatgttaaagttga 451  Q
    | |||||||||||||| |||||||||||||||||||||||||    
T  4313216 ggacaattatggtgaattttgaaaaaggaatgttaaagttga 4313257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 182; E-Value: 3e-98
Query Start/End: Original strand, 212 - 451
Target Start/End: Complemental strand, 8606799 - 8606559
Alignment:
Q  212 gaagggacttattccgaagggacagaaaaaagagggagaagaaaagaatagctcgtcaacacaagctaaatagggagaagagagaaaagttctttgacaa 311  Q
    |||||||||||||| ||||||||||||||| |||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||    
T  8606799 gaagggacttattctgaagggacagaaaaa-gagggagaagaaaagaatagttcgtcaacacaagctaaagagggagaagagagaaaagttctttgacaa 8606701  T
Q  312 ctcaagataacttttggtctgtgaaattgtgagggatgagggctctatttataggtgaggaggttgatg-aagatggaaaattggtttaatggaaatgat 410  Q
    ||||||| |||||||||| |||||||||||| || |||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||    
T  8606700 ctcaagagaacttttggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaatggaaaattggtttaatggaaatgat 8606601  T
Q  411 gaacaattatggtgaa-tttgaaaaaggaatgttaaagttga 451  Q
    | |||||||||||||| |||||||||||||||||||||||||    
T  8606600 ggacaattatggtgaattttgaaaaaggaatgttaaagttga 8606559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 182; E-Value: 3e-98
Query Start/End: Original strand, 212 - 451
Target Start/End: Complemental strand, 8613260 - 8613020
Alignment:
Q  212 gaagggacttattccgaagggacagaaaaaagagggagaagaaaagaatagctcgtcaacacaagctaaatagggagaagagagaaaagttctttgacaa 311  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||    
T  8613260 gaagggacttattccgaagggacagaaaaa-gagggagaagaaaagaatagctcgtcaacacaagctaaagagggagaagagagaaaagttctttggcaa 8613162  T
Q  312 ctcaagataacttttggtctgtgaaattgtgagggatgagggctctatttataggtgaggaggttgatg-aagatggaaaattggtttaatggaaatgat 410  Q
    ||||||| |||||||||| |||||||||||| || |||| ||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||    
T  8613161 ctcaagagaacttttggtgtgtgaaattgtgtggaatgaaggctctatttataggtgaggaggttgatgaaaaatggaaaattggtttaatggaaatgat 8613062  T
Q  411 gaacaattatggtgaa-tttgaaaaaggaatgttaaagttga 451  Q
    | |||||||||||||| |||||||||||||||||||||||||    
T  8613061 ggacaattatggtgaattttgaaaaaggaatgttaaagttga 8613020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 182; E-Value: 3e-98
Query Start/End: Original strand, 192 - 451
Target Start/End: Original strand, 48060135 - 48060395
Alignment:
Q  192 taccgaaggaacaaaattctgaagggacttattccgaagggacagaaaaaagagggagaagaaaagaatagctcgtcaacacaagctaaatagggagaag 291  Q
    ||||||||  ||||||||| |||||||||| ||||||||||||| ||||||| ||||||||||||||||||||||| ||||||||||||| |||||||||    
T  48060135 taccgaagcgacaaaattccgaagggactttttccgaagggacaaaaaaaag-gggagaagaaaagaatagctcgttaacacaagctaaagagggagaag 48060233  T
Q  292 agagaaaagttctttgacaactcaagataacttttggtctgtgaaattgtgagggatgagggctctatttataggtgaggaggttgatg-aagatggaaa 390  Q
    ||||||||||||||||||||||||||| |||||||||| |||||||||||| || ||||||||||||||||||| ||| |||||||||| || |||||||    
T  48060234 agagaaaagttctttgacaactcaagagaacttttggtgtgtgaaattgtgtggaatgagggctctatttatagttgaagaggttgatgaaaaatggaaa 48060333  T
Q  391 attggtttaatggaaatgatgaacaattatggtgaa-tttgaaaaaggaatgttaaagttga 451  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  48060334 attggtttaatggaaatgatgaacaattatggtgaattttgaaaaaggaatgttaaagttga 48060395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 179; E-Value: 2e-96
Query Start/End: Original strand, 212 - 451
Target Start/End: Original strand, 9554515 - 9554757
Alignment:
Q  212 gaagggacttattccgaagggacagaaaaaagagggagaagaaaagaatagctcgtcaacacaagctaaatagggagaagagag-aaaagttctttgaca 310  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  9554515 gaagggacttattccgaagggacagaaaaaagagggagaagaaaagaatagctcgtcaacacaagctaaatagggagaagagagaaaaagttctttgaca 9554614  T
Q  311 actcaagataacttttggtctgtgaaattgtgagggatgagggctctatttataggtgaggaggttgatg-aagatggaaaattggtttaatggaaatga 409  Q
    |||||||| |||||||||| |||||||||||  || |||||||||||||||||||||||||||||||||| || | ||||||||||||||||||||||||    
T  9554615 actcaagagaacttttggtgtgtgaaattgtatggaatgagggctctatttataggtgaggaggttgatgaaaaaaggaaaattggtttaatggaaatga 9554714  T
Q  410 tgaacaattatggtgaa-tttgaaaaaggaatgttaaagttga 451  Q
    || ||||||||||| || ||||||||| |||||||||||||||    
T  9554715 tggacaattatggtaaattttgaaaaatgaatgttaaagttga 9554757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 178; E-Value: 8e-96
Query Start/End: Original strand, 212 - 451
Target Start/End: Complemental strand, 261996 - 261756
Alignment:
Q  212 gaagggacttattccgaagggacagaaaaaagagggagaagaaaagaatagctcgtcaacacaagctaaatagggagaagagagaaaagttctttgacaa 311  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||    
T  261996 gaagggacttattccgaagggacagaaaaa-gagggagaagaaaagaatagctcgtcaacacaagctaaagagggagaagagagaaaagatctttgacaa 261898  T
Q  312 ctcaagataacttttggtctgtgaaattgtgagggatgagggctctatttataggtgaggaggttgatgaag-atggaaaattggtttaatggaaatgat 410  Q
    ||||||| |||||||||| |||||||||||| || ||||| ||||||||||||||||||| ||||||||||| | |||||||||||||||||||||||||    
T  261897 ctcaagagaacttttggtgtgtgaaattgtgtggaatgagagctctatttataggtgagggggttgatgaagaaaggaaaattggtttaatggaaatgat 261798  T
Q  411 gaacaattatggtgaa-tttgaaaaaggaatgttaaagttga 451  Q
    | |||||||||||||| |||||||||||||||||||||||||    
T  261797 ggacaattatggtgaattttgaaaaaggaatgttaaagttga 261756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 178; E-Value: 8e-96
Query Start/End: Original strand, 212 - 451
Target Start/End: Original strand, 21637983 - 21638223
Alignment:
Q  212 gaagggacttattccgaagggacagaaaaaagagggagaagaaaagaatagctcgtcaacacaagctaaatagggagaagagagaaaagttctttgacaa 311  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  21637983 gaagggacttattccgaagggacagaaaaaagagggagaagaaaagaatagctcgtcaacacaagctaaagagggagaagagagaaaagttctttgacaa 21638082  T
Q  312 ctcaagataacttttggtctgtgaaattgtgagggatgagggctctatttataggtgaggaggttgatg-aagatggaaaattggtttaatggaaatgat 410  Q
    ||||||| |||||||||| |||||||||||| || ||||| ||||||||||||||||||||| |||||| || | |||||||||||||||||||||||||    
T  21638083 ctcaagagaacttttggtgtgtgaaattgtgtggaatgagagctctatttataggtgaggagtttgatgaaaaaaggaaaattggtttaatggaaatgat 21638182  T
Q  411 gaacaattatggtgaa-tttgaaaaaggaatgttaaagttga 451  Q
    | |||||||| ||||| |||||||||||||||||||||||||    
T  21638183 ggacaattat-gtgaattttgaaaaaggaatgttaaagttga 21638223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 170; E-Value: 5e-91
Query Start/End: Original strand, 212 - 451
Target Start/End: Complemental strand, 37468666 - 37468425
Alignment:
Q  212 gaagggacttattccgaagggacagaaaaaagagggagaagaaaagaatagctcgtcaacacaagctaaatagggagaagagagaaaagttctttgacaa 311  Q
    ||||| |||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37468666 gaaggtactttttcctaagggacagaaaaaagagggagaagaaaagaatagctcgtcaacacaagctaaatagggagaagagagaaaagttctttgacaa 37468567  T
Q  312 ctcaagataacttttggtctgtgaaattgtgagggatgagggctctatttataggtgaggaggttgatg-aagatggaaaattggtttaatggaaatgat 410  Q
     |||||| |||||||||| |||||||||||| || |||| | ||||||||||||||||||||||||||| || |||||||||||||||||||||||||||    
T  37468566 ttcaagagaacttttggtgtgtgaaattgtgtggaatgatgactctatttataggtgaggaggttgatgaaaaatggaaaattggtttaatggaaatgat 37468467  T
Q  411 gaacaattatggtgaa-tttgaaaaaggaatgttaaagttga 451  Q
    | ||||||||| |||| ||||||||| |||||||||||||||    
T  37468466 ggacaattatgatgaattttgaaaaatgaatgttaaagttga 37468425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 222 - 451
Target Start/End: Original strand, 16030750 - 16030981
Alignment:
Q  222 attccgaagggacagaaaaaagagggagaagaaaagaatagctcgtcaacacaagctaaatagggagaagagagaaaagttctttgacaactcaagataa 321  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||    
T  16030750 attccgaagggacagaaaaaagagggagaagaaaagaatagctcgtcaacacaagctaaatagggagaagagagaaaagttctttgacaactcaagtgaa 16030849  T
Q  322 cttttggtctgtgaaattgtgagggatgagggctctatttataggtgaggaggttgatg-aagatggaaaattggtttaatggaaatgatgaacaattat 420  Q
    |||||||| ||| ||||| || |  ||||||||||||||||||||||||||| |||||| || | |||||||||||||||||||||||||| ||||||||    
T  16030850 cttttggtgtgtaaaattttgtgaaatgagggctctatttataggtgaggagtttgatgaaaaaaggaaaattggtttaatggaaatgatggacaattat 16030949  T
Q  421 ggtgaa-tttgaaaaaggaatgttaaagttga 451  Q
    | |||| |||||||||||||||||||||||||    
T  16030950 gatgaattttgaaaaaggaatgttaaagttga 16030981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 162; E-Value: 3e-86
Query Start/End: Original strand, 204 - 451
Target Start/End: Complemental strand, 41016006 - 41015752
Alignment:
Q  204 aaaattctgaagggacttattccgaagggacagaaaaaaga----gggagaagaaaagaatagctcgtcaacacaagctaaatagggagaagagagaaaa 299  Q
    ||||||| ||||||||||||||||||||||||||||||| |    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  41016006 aaaattccgaagggacttattccgaagggacagaaaaaaaaaaaagggagaagaaaagaatagctcgttaacacaagctaaatagggagaagagagaaaa 41015907  T
Q  300 gttctttgacaactcaagataac-ttttggtctgtgaaattgtgagggatgagggctctatttataggtgaggaggttgatg-aagatggaaaattggtt 397  Q
    ||||||||||||||||||| ||| ||||||| |||| ||||||| || |||||||||||||||||||||||||||||||||| || | |||||| |||||    
T  41015906 gttctttgacaactcaagagaactttttggtgtgtgtaattgtgtggtatgagggctctatttataggtgaggaggttgatgaaaaaaggaaaaatggtt 41015807  T
Q  398 taatggaaatgatgaacaattatggtgaa-tttgaaaaaggaatgttaaagttga 451  Q
    |||||||||||||| |||||||||||||| |||| ||||||||||||||||||||    
T  41015806 taatggaaatgatggacaattatggtgaattttggaaaaggaatgttaaagttga 41015752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 160; E-Value: 4e-85
Query Start/End: Original strand, 204 - 451
Target Start/End: Complemental strand, 41007227 - 41006972
Alignment:
Q  204 aaaattctgaagggacttattccgaagggacagaaaaaaga----gggagaagaaaagaatagctcgtcaacacaagctaaatagggagaagagagaaaa 299  Q
    ||||||| ||||||||||||||||||||||||||||||| |    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  41007227 aaaattccgaagggacttattccgaagggacagaaaaaaaaaaaagggagaagaaaagaatagctcgttaacacaagctaaatagggagaagagagaaaa 41007128  T
Q  300 gttctttgacaactcaagataactttt--ggtctgtgaaattgtgagggatgagggctctatttataggtgaggaggttgatg-aagatggaaaattggt 396  Q
    ||||||||||||||||||| |||||||  ||| |||| ||||||| || |||||||||||||||||||||||||||||||||| || | |||||| ||||    
T  41007127 gttctttgacaactcaagagaactttttgggtgtgtgtaattgtgtggtatgagggctctatttataggtgaggaggttgatgaaaaaaggaaaaatggt 41007028  T
Q  397 ttaatggaaatgatgaacaattatggtgaa-tttgaaaaaggaatgttaaagttga 451  Q
    ||||||||||||||| |||||||||||||| |||| ||||||||||||||||||||    
T  41007027 ttaatggaaatgatggacaattatggtgaattttggaaaaggaatgttaaagttga 41006972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 158; E-Value: 7e-84
Query Start/End: Original strand, 212 - 451
Target Start/End: Complemental strand, 17934710 - 17934472
Alignment:
Q  212 gaagggacttattccgaagggacagaaaaaagagggagaagaaaagaatagctcgtcaacacaagctaaatagggagaagagagaaaagttctttgacaa 311  Q
    |||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||    
T  17934710 gaagggacttattccgaagggacagaaaaa-gaaggagaagaaaagaatagctcgtcaacacaaggtaaatagg-agaagagagaaaagttctttgacaa 17934613  T
Q  312 ctcaagataacttttggtctgtgaaattgtgagggatgagggctctatttataggtgaggaggttgatg-aagatggaaaattggtttaatggaaatgat 410  Q
    ||||||| |||||||||| ||| |||||||| || |||||||||||||||||||||||||||||||||| || | |||||||||||||||||| ||||||    
T  17934612 ctcaagagaacttttggtgtgtaaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaaaggaaaattggtttaatgg-aatgat 17934514  T
Q  411 gaacaattatggtgaa-tttgaaaaaggaatgttaaagttga 451  Q
    | |||||||||||||| |||||||||||||| ||||||||||    
T  17934513 ggacaattatggtgaattttgaaaaaggaatattaaagttga 17934472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 222 - 451
Target Start/End: Original strand, 8154075 - 8154308
Alignment:
Q  222 attccgaagggacagaaaaaaga-gggagaagaaaagaatagctcgtcaacacaagctaaatagggagaagagagaaaagttctttgacaactcaagata 320  Q
    ||||||||||||||||||||| | |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  8154075 attccgaagggacagaaaaaaaaagggagaagaaaagaatagttcgtcaacacaagctaaatagggagaagagagaaaagttctttgacaactcaagaga 8154174  T
Q  321 ac-ttttggtctgtgaaattgtgagggatgagggctctatttataggtgaggaggttgatg-aagatggaaaattggtttaatggaaatgatgaacaatt 418  Q
    || ||||||| ||| |||||||| || |||||||||||||||||||||||||||||||||| || | ||||||  |||||||||||||||||| ||||||    
T  8154175 actttttggtgtgtcaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaaaggaaaaaaggtttaatggaaatgatggacaatt 8154274  T
Q  419 atggtgaa-tttgaaaaaggaatgttaaagttga 451  Q
    |||||||| |||||||||||||||||||||||||    
T  8154275 atggtgaattttgaaaaaggaatgttaaagttga 8154308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 212 - 451
Target Start/End: Original strand, 13111221 - 13111446
Alignment:
Q  212 gaagggacttattccgaagggacagaaaaaagagggagaagaaaagaatagctcgtcaacacaagctaaatagggagaagagagaaaagttctttgacaa 311  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  13111221 gaagggacttattccgaagggacagaaaaaagagggagaagaaaagaatagctcgtcaacacaagctaaagagggagaagagagaaaagttctttgacaa 13111320  T
Q  312 ctcaagataacttttggtctgtgaaattgtgagggatgagggctctatttataggtgaggaggttgatgaagatggaaaattggtttaatggaaatgatg 411  Q
    ||||||| |||||||||| |||||||||||| || |||| |||||||||||||||||||||||||||||||                |||||||||||||    
T  13111321 ctcaagagaacttttggtgtgtgaaattgtgtggaatgatggctctatttataggtgaggaggttgatgaa---------------aaatggaaatgatg 13111405  T
Q  412 aacaattatggtgaa-tttgaaaaaggaatgttaaagttga 451  Q
     |||||||||||||| |||||||||||||||||||||||||    
T  13111406 gacaattatggtgaattttgaaaaaggaatgttaaagttga 13111446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 222 - 451
Target Start/End: Original strand, 26386141 - 26386373
Alignment:
Q  222 attccgaagggacagaaaaaagaggg-agaagaaaagaatagctcgtcaacacaagctaaatagggagaagagagaaaagttctttgacaactcaagata 320  Q
    |||||||||||||||||||||||||| ||||||||||||||| |||| |||||||||||||||||||||||||||||||||| ||||||||||||||| |    
T  26386141 attccgaagggacagaaaaaagaggggagaagaaaagaataggtcgttaacacaagctaaatagggagaagagagaaaagttatttgacaactcaagaga 26386240  T
Q  321 acttttggtctgtgaaattgtgagggatgagggctctatttataggtgaggaggttgatg-aagatggaaaattggtttaatggaaatgatgaacaatta 419  Q
    | ||||||| |||||||||||| || ||||| | ||||||||||||| |||||||||||| || ||||||||||| |||||||||||| ||| |||||||    
T  26386241 atttttggtgtgtgaaattgtgtggaatgagagttctatttataggtaaggaggttgatgaaaaatggaaaattgatttaatggaaataatggacaatta 26386340  T
Q  420 tggtgaa-tttgaaaaaggaatgttaaagttga 451  Q
    ||||||| |||||||||||||||||||||||||    
T  26386341 tggtgaattttgaaaaaggaatgttaaagttga 26386373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 237 - 451
Target Start/End: Original strand, 16815302 - 16815513
Alignment:
Q  237 aaaaaagagggagaagaaaagaatagctcgtcaacacaagctaaatagggagaagagagaaaagttctttgacaactcaagataacttttggtctgtgaa 336  Q
    |||||| | |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||| ||||||    
T  16815302 aaaaaaaaaggagaagaaaagaatagctcgtcaacacaagctaaatagg-agaagagagaaaagttctttgacaactcaagagaacttttggtgtgtgaa 16815400  T
Q  337 attgtgagggatgagggctctatttataggtgaggaggttgatg-aagatggaaaattggtttaatggaaatgatgaacaattatggtgaa-tttgaaaa 434  Q
    |||||| || ||||||||    | |||||||||||||||||||| || | ||||||||||||||||| |||||||| |||||||| ||||| ||||||||    
T  16815401 attgtgtggaatgagggc----tatataggtgaggaggttgatgaaaaaaggaaaattggtttaatgaaaatgatggacaattatcgtgaattttgaaaa 16815496  T
Q  435 aggaatgttaaagttga 451  Q
     ||||||||||||||||    
T  16815497 gggaatgttaaagttga 16815513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 259 - 451
Target Start/End: Original strand, 14887501 - 14887693
Alignment:
Q  259 atagctcgtcaacacaagctaaatagggagaagagagaaaagttctttgacaactcaagataacttttggtctgtgaaattgtgagggatgagggctcta 358  Q
    ||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||| || ||||||| ||||    
T  14887501 atagctcgtcaacacaagctaag-agggagaagagagaaaagttctttgacaactcaagagaacttttggtgtgtgaaattgtgtggaatgagggttcta 14887599  T
Q  359 tttataggtgaggaggttgatg-aagatggaaaattggtttaatggaaatgatgaacaattatggtgaa-tttgaaaaaggaatgttaaagttga 451  Q
    ||||||||||||||| |||||| || | |||||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||    
T  14887600 tttataggtgaggagtttgatgaaaaaaggaaaattggtttaatggaaatgatggacaattat-gtgaattttgaaaaaggaatgttaaagttga 14887693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 244 - 451
Target Start/End: Complemental strand, 35491650 - 35491434
Alignment:
Q  244 agggagaagaaaagaatagct----cgtcaacacaagctaaat-agggagaagagagaaaagttctttgacaactcaagataactttt--ggtctgtgaa 336  Q
    |||||||||||||||||||||    |||||||||||||||||| ||||||||||||||||||||||||||||||| |||  |||||||  ||| | ||||    
T  35491650 agggagaagaaaagaatagctagctcgtcaacacaagctaaatgagggagaagagagaaaagttctttgacaacttaagtgaacttttttggtgtctgaa 35491551  T
Q  337 attgtgagggatgagggctctatttataggtgaggaggttgatg-aagatggaaaattggtttaatggaaatgatgaacaattatggtgaa-tttgaaaa 434  Q
    |||||| || |||| ||||||||||||||||||||||||||||| || ||||||| ||||||||| |||||||||| |||||||||||||| ||||||||    
T  35491550 attgtgtggaatgatggctctatttataggtgaggaggttgatgaaaaatggaaatttggtttaacggaaatgatggacaattatggtgaattttgaaaa 35491451  T
Q  435 aggaatgttaaagttga 451  Q
    |||||||||||||||||    
T  35491450 aggaatgttaaagttga 35491434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 192 - 401
Target Start/End: Original strand, 44362931 - 44363140
Alignment:
Q  192 taccgaaggaacaaaattctgaagggacttattccgaagggacagaaaaaagagggagaagaaaagaatagctcgtcaacacaagctaaat-agggagaa 290  Q
    ||||||||| ||||||||  ||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||    
T  44362931 taccgaagggacaaaatttcgaaaggacttattccgaagggacagaaaaaagagggagaagaaaataatagctcgtcaacacaagctaaatgagggagaa 44363030  T
Q  291 gagagaaaagttctttgacaactcaagataacttttggtctgtgaaattgtgagggatgagggctctatttataggtgaggaggttgatgaagatggaaa 390  Q
    |||||||||||| ||||| ||||||| | |||||||||| ||||     | | || ||||| ||| |||||||||||||||||||||||||| |||||||    
T  44363031 gagagaaaagttatttga-aactcaatagaacttttggtgtgtgttgaagagtggaatgagagctatatttataggtgaggaggttgatgaaaatggaaa 44363129  T
Q  391 attggtttaat 401  Q
    | | |||||||    
T  44363130 actagtttaat 44363140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 212 - 342
Target Start/End: Complemental strand, 12558491 - 12558360
Alignment:
Q  212 gaagggacttattccgaagggacagaaa-aaagagggagaagaaaagaatagctcgtcaacacaagctaaatagggagaagagagaaaagttctttgaca 310  Q
    |||||||||| ||||||||||||||||| ||| ||||||||||||||||||||| || |||||||| |||| ||||||||||||||||||||||||||||    
T  12558491 gaagggactttttccgaagggacagaaacaaaaagggagaagaaaagaatagcttgttaacacaagttaaagagggagaagagagaaaagttctttgaca 12558392  T
Q  311 actcaagataacttttggtctgtgaaattgtg 342  Q
    |||||||| |||||||||| | ||||||||||    
T  12558391 actcaagagaacttttggtgtctgaaattgtg 12558360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 224 - 328
Target Start/End: Original strand, 16983460 - 16983564
Alignment:
Q  224 tccgaagggacagaaaaaagagggagaagaaaagaatagctcgtcaacacaagctaaat-agggagaagagagaaaagttctttgacaactcaagataac 322  Q
    |||||||||||| |||||||||| |||  |||||||||||||||||||||||||||||  ||||||||||||||||| || ||||||||||||||| |||    
T  16983460 tccgaagggaca-aaaaaagaggaagagaaaaagaatagctcgtcaacacaagctaaaggagggagaagagagaaaaattatttgacaactcaagagaac 16983558  T
Q  323 ttttgg 328  Q
    ||||||    
T  16983559 ttttgg 16983564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 224 - 327
Target Start/End: Original strand, 14398023 - 14398126
Alignment:
Q  224 tccgaagggacagaaaaaagagggagaagaaaagaatagctcgtcaacacaagctaaata-gggagaagagagaaaagttctttgacaactcaagataac 322  Q
    |||||| ||||||||||| || ||||||||||||||||| | ||||||| |||||||||| |||||||||||||||| || |||||||||||||||||||    
T  14398023 tccgaaaggacagaaaaa-gatggagaagaaaagaatagttggtcaacaaaagctaaataagggagaagagagaaaaattatttgacaactcaagataac 14398121  T
Q  323 ttttg 327  Q
    |||||    
T  14398122 ttttg 14398126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 224 - 328
Target Start/End: Complemental strand, 48431899 - 48431795
Alignment:
Q  224 tccgaagggacagaaaaaagagggagaagaaaagaatagctcgtcaacacaagctaaat-agggagaagagagaaaagttctttgacaactcaagataac 322  Q
    |||||||||||||||||| ||| |||| ||||||||||| ||||| |||||| |||||  |||||||||||||||||||| ||||||||||||||| |||    
T  48431899 tccgaagggacagaaaaa-gagagagaggaaaagaatagttcgtcgacacaacctaaaggagggagaagagagaaaagttatttgacaactcaagagaac 48431801  T
Q  323 ttttgg 328  Q
    ||||||    
T  48431800 ttttgg 48431795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 224 - 328
Target Start/End: Original strand, 4662663 - 4662767
Alignment:
Q  224 tccgaagggacagaaaaaagagggagaagaaaagaatagctcgtcaacacaagct-aaatagggagaagagagaaaagttctttgacaactcaagataac 322  Q
    |||||||||||||||| | ||||||||  |||||||||||||||||||||||||| ||| ||||| || | ||||||||||||||| ||||||||| |||    
T  4662663 tccgaagggacagaaaga-gagggagacaaaaagaatagctcgtcaacacaagctaaaacagggataacaaagaaaagttctttgaaaactcaagagaac 4662761  T
Q  323 ttttgg 328  Q
    ||||||    
T  4662762 ttttgg 4662767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 247 - 328
Target Start/End: Complemental strand, 48435461 - 48435379
Alignment:
Q  247 gagaagaaaagaatagctcgtcaacacaagctaaat-agggagaagagagaaaagttctttgacaactcaagataacttttgg 328  Q
    |||| ||||||||||||| ||||||||||||||||  |||||||||||||||||||||||| |||||| |||| |||||||||    
T  48435461 gagaggaaaagaatagcttgtcaacacaagctaaaggagggagaagagagaaaagttctttcacaacttaagagaacttttgg 48435379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 396 - 451
Target Start/End: Original strand, 12480228 - 12480284
Alignment:
Q  396 tttaatggaaatgatgaacaattatggtgaa-tttgaaaaaggaatgttaaagttga 451  Q
    |||||||||||||||| |||||||||||||| |||||||||||| ||||||||||||    
T  12480228 tttaatggaaatgatggacaattatggtgaattttgaaaaaggattgttaaagttga 12480284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 23 - 56
Target Start/End: Original strand, 4312861 - 4312894
Alignment:
Q  23 cacacacatttctcatttatatttacattggacc 56  Q
    ||||||| ||||||||||||||||||||||||||    
T  4312861 cacacacttttctcatttatatttacattggacc 4312894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 23 - 56
Target Start/End: Original strand, 8153907 - 8153940
Alignment:
Q  23 cacacacatttctcatttatatttacattggacc 56  Q
    ||||||| ||||||||||||||||||||||||||    
T  8153907 cacacacttttctcatttatatttacattggacc 8153940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 23 - 56
Target Start/End: Original strand, 9524635 - 9524668
Alignment:
Q  23 cacacacatttctcatttatatttacattggacc 56  Q
    ||||||| ||||||||||||||||||||||||||    
T  9524635 cacacacttttctcatttatatttacattggacc 9524668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 23 - 56
Target Start/End: Complemental strand, 11182253 - 11182220
Alignment:
Q  23 cacacacatttctcatttatatttacattggacc 56  Q
    ||||||| ||||||||||||||||||||||||||    
T  11182253 cacacacctttctcatttatatttacattggacc 11182220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 23 - 56
Target Start/End: Original strand, 13104891 - 13104924
Alignment:
Q  23 cacacacatttctcatttatatttacattggacc 56  Q
    ||||||| ||||||||||||||||||||||||||    
T  13104891 cacacacttttctcatttatatttacattggacc 13104924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 23 - 56
Target Start/End: Original strand, 13111048 - 13111081
Alignment:
Q  23 cacacacatttctcatttatatttacattggacc 56  Q
    ||||||| ||||||||||||||||||||||||||    
T  13111048 cacacacttttctcatttatatttacattggacc 13111081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 23 - 56
Target Start/End: Original strand, 14880548 - 14880581
Alignment:
Q  23 cacacacatttctcatttatatttacattggacc 56  Q
    ||||||| ||||||||||||||||||||||||||    
T  14880548 cacacacttttctcatttatatttacattggacc 14880581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 23 - 56
Target Start/End: Original strand, 14887069 - 14887102
Alignment:
Q  23 cacacacatttctcatttatatttacattggacc 56  Q
    ||||||| ||||||||||||||||||||||||||    
T  14887069 cacacacttttctcatttatatttacattggacc 14887102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 23 - 56
Target Start/End: Original strand, 14892362 - 14892395
Alignment:
Q  23 cacacacatttctcatttatatttacattggacc 56  Q
    ||||||| ||||||||||||||||||||||||||    
T  14892362 cacacacttttctcatttatatttacattggacc 14892395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 23 - 56
Target Start/End: Original strand, 23281306 - 23281339
Alignment:
Q  23 cacacacatttctcatttatatttacattggacc 56  Q
    ||||||| ||||||||||||||||||||||||||    
T  23281306 cacacacttttctcatttatatttacattggacc 23281339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 23 - 56
Target Start/End: Original strand, 23287393 - 23287426
Alignment:
Q  23 cacacacatttctcatttatatttacattggacc 56  Q
    ||||||| ||||||||||||||||||||||||||    
T  23287393 cacacacttttctcatttatatttacattggacc 23287426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 23 - 56
Target Start/End: Complemental strand, 41007391 - 41007358
Alignment:
Q  23 cacacacatttctcatttatatttacattggacc 56  Q
    ||||||| ||||||||||||||||||||||||||    
T  41007391 cacacacttttctcatttatatttacattggacc 41007358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 23 - 56
Target Start/End: Complemental strand, 41016170 - 41016137
Alignment:
Q  23 cacacacatttctcatttatatttacattggacc 56  Q
    ||||||| ||||||||||||||||||||||||||    
T  41016170 cacacacttttctcatttatatttacattggacc 41016137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 20 - 56
Target Start/End: Complemental strand, 68984 - 68948
Alignment:
Q  20 acacacacacatttctcatttatatttacattggacc 56  Q
    |||| ||||| ||||||||||||||||||||||||||    
T  68984 acacgcacacttttctcatttatatttacattggacc 68948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 20 - 56
Target Start/End: Complemental strand, 75077 - 75041
Alignment:
Q  20 acacacacacatttctcatttatatttacattggacc 56  Q
    |||| ||||| ||||||||||||||||||||||||||    
T  75077 acacgcacacttttctcatttatatttacattggacc 75041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 205; Significance: 1e-112; HSPs: 2)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 193 - 451
Target Start/End: Original strand, 89273 - 89533
Alignment:
Q  193 accgaaggaacaaaattctgaagggacttattccgaagggacagaaaaaagagggagaagaaaagaatagctcgtcaacacaagctaaatagggagaaga 292  Q
    |||||||| ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  89273 accgaagggacaaaattccgaagggacttattccgaagggacataaaaaagagggagaagaaaagaacagctcgtcaacacaagctaaatagggagaaga 89372  T
Q  293 gagaaaagttctttgacaactcaagataacttttggtctgtgaaattgtgagggatgagggctctatttataggtgaggaggttgatg-aagatggaaaa 391  Q
    |||||||||||||||||||||||||| |||||||||| |||||||||||| || |||||||||||||||||||||||||||||||||| || ||||||||    
T  89373 gagaaaagttctttgacaactcaagagaacttttggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaatggaaaa 89472  T
Q  392 ttggtttaatggaaatgatgaacaattatggtgaa-tttgaaaaaggaatgttaaagttga 451  Q
    |||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||    
T  89473 ttggtttaatggaaatgatggacaattatggtgaattttgaaaaaggaatgttaaagttga 89533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 23 - 56
Target Start/End: Original strand, 89121 - 89154
Alignment:
Q  23 cacacacatttctcatttatatttacattggacc 56  Q
    ||||||| ||||||||||||||||||||||||||    
T  89121 cacacacttttctcatttatatttacattggacc 89154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 202; Significance: 1e-110; HSPs: 30)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 192 - 451
Target Start/End: Complemental strand, 50188451 - 50188191
Alignment:
Q  192 taccgaaggaacaaaattctgaagggacttattccgaagggacagaaaaaagagggagaagaaaagaatagctcgtcaacacaagctaaatagggagaag 291  Q
    ||||||||| ||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50188451 taccgaagggacaaaattccgaagggactt-ttccgaagggacagaaaaaagagggagaagaaaagaatagctcgtcaacacaagctaaatagggagaag 50188353  T
Q  292 agagaaaagttctttgacaactcaagataacttttggtctgtgaaattgtgagggatgagggctctatttataggtgaggaggttgatg-aagatggaaa 390  Q
    ||||||||||||||||||||||||||| |||||||||| |||||||||||| || |||||||||||||||||||||||||||||||||| || | |||||    
T  50188352 agagaaaagttctttgacaactcaagagaacttttggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaaaggaaa 50188253  T
Q  391 attggtttaatggaaatgatgaacaattatggtgaa-tttgaaaaaggaatgttaaagttga 451  Q
    ||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||    
T  50188252 attggtttaatggaaatgatggacaattatggtgaattttgaaaaaggaatgttaaagttga 50188191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 212 - 451
Target Start/End: Original strand, 19737432 - 19737673
Alignment:
Q  212 gaagggacttattccgaagggacagaaaaaagagggagaagaaaagaatagctcgtcaacacaagctaaatagggagaagagagaaaagttctttgacaa 311  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  19737432 gaagggacttattccgaagggacagaaaaaagagggagaagaaaagaatagctcgtcaacacaagctaaagagggagaagagagaaaagttctttgacaa 19737531  T
Q  312 ctcaagataacttttggtctgtgaaattgtgagggatgagggctctatttataggtgaggaggttgatg-aagatggaaaattggtttaatggaaatgat 410  Q
    ||||||| |||||||||| |||||||||||| || |||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||    
T  19737532 ctcaagagaacttttggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaatggaaaattggtttaatggaaatgat 19737631  T
Q  411 gaacaattatggtgaa-tttgaaaaaggaatgttaaagttga 451  Q
    | |||||||||||||| |||||||||||||||||||||||||    
T  19737632 ggacaattatggtgaattttgaaaaaggaatgttaaagttga 19737673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 178; E-Value: 8e-96
Query Start/End: Original strand, 212 - 451
Target Start/End: Original strand, 3381863 - 3382103
Alignment:
Q  212 gaagggacttattccgaagggacagaaaaaagagggagaagaaaagaatagctcgtcaacacaagctaaatagggagaagagagaaaagttctttgacaa 311  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  3381863 gaagggacttattccgaagggacagaaaaaagagggagaagaaaagaatagctcgtcaacacaagctaaagagggagaagagagaaaagttctttgacaa 3381962  T
Q  312 ctcaagataacttttggtctgtgaaattgtgagggatgagggctctatttataggtgaggaggttgatg-aagatggaaaattggtttaatggaaatgat 410  Q
    ||||||| |||||||||| |||||||||||| || ||||||||||||||||||||||||||| |||||| || | |||||||||||||||||||||||||    
T  3381963 ctcaagagaacttttggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggagtttgatgaaaaaaggaaaattggtttaatggaaatgat 3382062  T
Q  411 gaacaattatggtgaa-tttgaaaaaggaatgttaaagttga 451  Q
    | |||||||| ||||| |||||||||||||||||||| ||||    
T  3382063 ggacaattat-gtgaattttgaaaaaggaatgttaaaattga 3382103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 212 - 451
Target Start/End: Original strand, 39744849 - 39745089
Alignment:
Q  212 gaagggacttattccgaagggacagaaaaaagagggagaagaaaagaatagctcgtcaacacaagctaaatagggagaagagagaaaagttctttgacaa 311  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  39744849 gaagggacttattccgaagggacggaaaaaagagggagaagaaaagaatagctcgtcaacacaagctaaagagggagaagagagaaaagttctttgacaa 39744948  T
Q  312 ctcaagataacttttggtctgtgaaattgtgagggatgagggctctatttataggtgaggaggttgatg-aagatggaaaattggtttaatggaaatgat 410  Q
    ||||||| |||||||||| |||||||||||| || |||||||||||||||||||||||| || |||||| || | |||||||||||||||||||||||||    
T  39744949 ctcaagagaacttttggtgtgtgaaattgtgtggaatgagggctctatttataggtgagaagtttgatgaaaaaaggaaaattggtttaatggaaatgat 39745048  T
Q  411 gaacaattatggtgaa-tttgaaaaaggaatgttaaagttga 451  Q
    | |||||||| ||||| |||||||||||||||||||||||||    
T  39745049 ggacaattat-gtgaattttgaaaaaggaatgttaaagttga 39745089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 170; E-Value: 5e-91
Query Start/End: Original strand, 216 - 451
Target Start/End: Original strand, 3388613 - 3388849
Alignment:
Q  216 ggacttattccgaagggacagaaaaaagagggagaagaaaagaatagctcgtcaacacaagctaaatagggagaagagagaaaagttctttgacaactca 315  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  3388613 ggacttattccgaagggacagaaaaaagagggagaagaaaagaatagctcgtcaacacaagctaaagagggagaagagagaaaagttctttgacaactca 3388712  T
Q  316 agataacttttggtctgtgaaattgtgagggatgagggctctatttataggtgaggaggttgatg-aagatggaaaattggtttaatggaaatgatgaac 414  Q
    ||| || ||||||| |||||||||||| || ||||||||||||||||||||||||||| |||||| || | |||||||||||||||| ||||||||| ||    
T  3388713 agagaatttttggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggagtttgatgaaaaaaggaaaattggtttaatagaaatgatggac 3388812  T
Q  415 aattatggtgaa-tttgaaaaaggaatgttaaagttga 451  Q
    |||||| ||||| |||||||||||||||||||||||||    
T  3388813 aattat-gtgaattttgaaaaaggaatgttaaagttga 3388849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 167; E-Value: 3e-89
Query Start/End: Original strand, 212 - 451
Target Start/End: Original strand, 8093702 - 8093944
Alignment:
Q  212 gaagggacttattccgaagggacagaaaaaagagggagaagaaaagaatagctcgtcaacacaagctaaatagggagaagagagaaaagttctttgacaa 311  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  8093702 gaagggacttattccgaagggacagaaaaaaaagggagaagaaaagaatagctcgttaacacaagctaaatagggagaagagagaaaagttctttgacaa 8093801  T
Q  312 ctcaagataac-ttttggtctgtgaaattgtgagggatgagggctctatttataggtgaggaggttgatg-aagatggaaaattggtttaatggaaatga 409  Q
    ||||||| ||| ||||||| ||| |||||||| |  |||||||||||||||||||||||||||||||||| || | |||||| |||||||||||||||||    
T  8093802 ctcaagagaactttttggtgtgtcaaattgtgtgaaatgagggctctatttataggtgaggaggttgatgaaaaaaggaaaaatggtttaatggaaatga 8093901  T
Q  410 tgaacaattatggtgaa-tttgaaaaaggaatgttaaagttga 451  Q
     | |||||||||||||| |||||||||||||||||||||||||    
T  8093902 aggacaattatggtgaattttgaaaaaggaatgttaaagttga 8093944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 167; E-Value: 3e-89
Query Start/End: Original strand, 212 - 451
Target Start/End: Original strand, 8102507 - 8102749
Alignment:
Q  212 gaagggacttattccgaagggacagaaaaaagagggagaagaaaagaatagctcgtcaacacaagctaaatagggagaagagagaaaagttctttgacaa 311  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  8102507 gaagggacttattccgaagggacagaaaaaaaagggagaagaaaagaatagctcgttaacacaagctaaatagggagaagagagaaaagttctttgacaa 8102606  T
Q  312 ctcaagataac-ttttggtctgtgaaattgtgagggatgagggctctatttataggtgaggaggttgatg-aagatggaaaattggtttaatggaaatga 409  Q
    ||||||| ||| ||||||| ||| |||||||| |  |||||||||||||||||||||||||||||||||| || | |||||| |||||||||||||||||    
T  8102607 ctcaagagaactttttggtgtgtcaaattgtgtgaaatgagggctctatttataggtgaggaggttgatgaaaaaaggaaaaatggtttaatggaaatga 8102706  T
Q  410 tgaacaattatggtgaa-tttgaaaaaggaatgttaaagttga 451  Q
     | |||||||||||||| |||||||||||||||||||||||||    
T  8102707 aggacaattatggtgaattttgaaaaaggaatgttaaagttga 8102749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 165; E-Value: 5e-88
Query Start/End: Original strand, 225 - 451
Target Start/End: Original strand, 55792670 - 55792897
Alignment:
Q  225 ccgaagggacagaaaaaagagggagaagaaaagaatagctcgtcaacacaagctaaatagggagaagagagaaaagttctttgacaactcaagataactt 324  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||| ||||||| | |||||    
T  55792670 ccgaagggacagaaaaaagagggagaagaaaagaatagctcgtcaacacaagctaag-agggagaagagagaaaagttctttgataactcaatagaactt 55792768  T
Q  325 ttggtctgtgaaattgtgagggatgagggctctatttataggtgaggaggttgatg-aagatggaaaattggtttaatggaaatgatgaacaattatggt 423  Q
    ||||| |||||||||||| || |||||||||||||||||||||| ||||||||||| || |||||||||||||||||||||||||||| |||||||||||    
T  55792769 ttggtgtgtgaaattgtgtggaatgagggctctatttataggtggggaggttgatgaaaaatggaaaattggtttaatggaaatgatggacaattatggt 55792868  T
Q  424 gaa-tttgaaaaaggaatgttaaagttga 451  Q
    ||| |||||||||||||||||||||||||    
T  55792869 gaattttgaaaaaggaatgttaaagttga 55792897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 155; E-Value: 4e-82
Query Start/End: Original strand, 243 - 451
Target Start/End: Complemental strand, 20548987 - 20548777
Alignment:
Q  243 gagggagaagaaaagaatagctcgtcaacacaagctaaatagggagaagagagaaaagttctttgacaactcaagataacttttggtctgtgaaattgtg 342  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||    
T  20548987 gagggagaagaaaagaatagctcgtcaacacaagctaaagagggagaagagagaaaagttctttgacaactcaagagaacttttggtgtgtgaaattgtg 20548888  T
Q  343 agggatgagggctctatttataggtgaggaggttgatg-aagatggaaaattggtttaatggaaatgatgaacaattatggtgaa-tttgaaaaaggaat 440  Q
     || |||||||||||||||||||||||||||||||||| || ||||||||||||||||||| ||||| || ||||||||| |||| ||||||||||||||    
T  20548887 tggaatgagggctctatttataggtgaggaggttgatgaaaaatggaaaattggtttaatgaaaatggtggacaattatgatgaattttgaaaaaggaat 20548788  T
Q  441 gttaaagttga 451  Q
    |||||||||||    
T  20548787 gttaaagttga 20548777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 237 - 451
Target Start/End: Complemental strand, 38853976 - 38853759
Alignment:
Q  237 aaaaaagagggagaagaaaagaatagctcgtcaacacaagctaaatagggagaagagagaaaagttctttgacaactcaagataacttttggtctgtgaa 336  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||| ||| ||    
T  38853976 aaaaaagagggagaagaaaagaatagctcgttaacacaagctaaatagggagaagagagaaaaattctttgacaactcaagagaacttttggtgtgtcaa 38853877  T
Q  337 attgtgagggatgagggctctatttataggtgaggaggttgatg-aagatggaaaattggtttaatggaaatgatgaacaattatggtgaattt--gaaa 433  Q
    |||||| || ||||  ||||||||||||||||||||| |||||| || | ||||||||| |||||||||||||||| |||||||||||||||||   |||    
T  38853876 attgtgtggaatgaatgctctatttataggtgaggagtttgatgaaaaaaggaaaattgatttaatggaaatgatggacaattatggtgaattttgaaaa 38853777  T
Q  434 aaggaatgttaaagttga 451  Q
    ||||||||||||||||||    
T  38853776 aaggaatgttaaagttga 38853759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 283 - 451
Target Start/End: Complemental strand, 8658066 - 8657896
Alignment:
Q  283 agggagaagagagaaaagttctttgacaactcaagataacttttggtctgtgaaattgtgagggatgagggctctatttataggtgaggaggttgatg-a 381  Q
    |||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||| ||  ||||||||||||||||||||||||||||||||| |    
T  8658066 agggagaagagagaaaagttctttgacaactcaagagaacttttggtgtgtgaaattgtgtggattgagggctctatttataggtgaggaggttgatgaa 8657967  T
Q  382 agatggaaaattggtttaatggaaatgatgaacaattatggtgaa-tttgaaaaaggaatgttaaagttga 451  Q
    | | ||||||||||||||||||||| |||| |||||||||||||| |||||||||||||||||||||||||    
T  8657966 aaaaggaaaattggtttaatggaaaagatggacaattatggtgaattttgaaaaaggaatgttaaagttga 8657896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 202 - 373
Target Start/End: Original strand, 8816927 - 8817097
Alignment:
Q  202 acaaaattctgaagggacttattccgaagggacagaaaaaagagggagaagaaaagaatagctcgtcaacacaagctaaat-agggagaagagagaaaag 300  Q
    ||||||||| |||||||||| ||||||||||| ||||||  |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  8816927 acaaaattccgaagggactt-ttccgaagggatagaaaat-gagggagaagaaaagaatagctcgtcaacacaagctaaatgagggagaagagagaaaag 8817024  T
Q  301 ttctttgacaactcaagataacttttggtctgtgaaattgtgagggatgagggctctatttataggtgaggag 373  Q
    ||||||||||||||||||||||||||||| |||||||||||| || ||| | |||||||||||||||||||||    
T  8817025 ttctttgacaactcaagataacttttggtgtgtgaaattgtgtggaatgtgagctctatttataggtgaggag 8817097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 192 - 402
Target Start/End: Original strand, 18482783 - 18482994
Alignment:
Q  192 taccgaaggaacaaaattctgaagggacttattccgaagggacagaaa-aaagag-ggagaagaaaagaatagctcgtcaacacaagctaaa-tagggag 288  Q
    ||||||||||||||||||  |||||||||| |||||||  |||||||| ||  || ||||| |||||||||||||||||||| |||||||||  ||||||    
T  18482783 taccgaaggaacaaaatttcgaagggactttttccgaaatgacagaaataattagaggagaggaaaagaatagctcgtcaactcaagctaaaggagggag 18482882  T
Q  289 aagagagaaaagttctttgacaactcaagataacttttggtctgtgaaattgtgagggatgagggctctatttataggtgaggaggttgatgaagatgga 388  Q
    |||||||||||||  |  |||||||||||| |||||||||| ||| ||||||||  | ||||| |||||||||||||||    ||||||||||| |||||    
T  18482883 aagagagaaaagt--tgggacaactcaagagaacttttggtgtgtcaaattgtgtcgaatgagagctctatttataggtttaaaggttgatgaaaatgga 18482980  T
Q  389 aaattggtttaatg 402  Q
    |||||| |||||||    
T  18482981 aaattgatttaatg 18482994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 224 - 327
Target Start/End: Original strand, 20513605 - 20513708
Alignment:
Q  224 tccgaagggacagaaaaaagagggagaagaaaagaatagctcgtcaacacaagctaaa-tagggagaagagagaaaagttctttgacaactcaagataac 322  Q
    |||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||| ||||||||||||||| |||    
T  20513605 tccgaaaggacagaaaa-agagggagaagaaaagaatagctcgtcaacacaagctaaaggagggagaagagagaaaagttttttgacaactcaagagaac 20513703  T
Q  323 ttttg 327  Q
    |||||    
T  20513704 ttttg 20513708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 224 - 329
Target Start/End: Complemental strand, 40684459 - 40684354
Alignment:
Q  224 tccgaagggacagaaaaaagagggagaagaaaagaatagctcgtcaacacaagctaaatag-ggagaagagagaaaagttctttgacaactcaagataac 322  Q
    ||||||||||||||||||  |||||||||||||||||| ||||||||||||| |||||| | |||||||||||||||||||||||||||||||||| |||    
T  40684459 tccgaagggacagaaaaac-agggagaagaaaagaatatctcgtcaacacaaactaaatggaggagaagagagaaaagttctttgacaactcaagaaaac 40684361  T
Q  323 ttttggt 329  Q
    |||||||    
T  40684360 ttttggt 40684354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 226 - 328
Target Start/End: Complemental strand, 16595563 - 16595461
Alignment:
Q  226 cgaagggacagaaaaaagagggagaagaaaagaatagctcgtcaacacaagctaaat-agggagaagagagaaaagttctttgacaactcaagataactt 324  Q
    |||||||||| |||||||||||||| ||||||||| ||||||||||||||||||||  |||||||||||||||||||||||| ||||||||||| |||||    
T  16595563 cgaagggaca-aaaaaagagggagaggaaaagaattgctcgtcaacacaagctaaaggagggagaagagagaaaagttctttaacaactcaagagaactt 16595465  T
Q  325 ttgg 328  Q
    ||||    
T  16595464 ttgg 16595461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 237 - 326
Target Start/End: Complemental strand, 33722493 - 33722403
Alignment:
Q  237 aaaaaagagggagaagaaaagaatagctcgtcaacacaagctaaa-tagggagaagagagaaaagttctttgacaactcaagataactttt 326  Q
    |||||||||||||||||||||||||||| ||||||||||||||||  |||||||||||||||||||||||||||||||||| | |||||||    
T  33722493 aaaaaagagggagaagaaaagaatagcttgtcaacacaagctaaaggagggagaagagagaaaagttctttgacaactcaaaagaactttt 33722403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 226 - 326
Target Start/End: Complemental strand, 55081296 - 55081196
Alignment:
Q  226 cgaagggacagaaaaaagagggagaagaaaagaatagctcgtcaacacaagctaaa-tagggagaagagagaaaagttctttgacaactcaagataactt 324  Q
    |||||||||||||||| |||||||| ||||||||||||||||||||||||||||||  |||||||||||||||||  ||||||||||||||||| |||||    
T  55081296 cgaagggacagaaaaa-gagggagaggaaaagaatagctcgtcaacacaagctaaaggagggagaagagagaaaaactctttgacaactcaagagaactt 55081198  T
Q  325 tt 326  Q
    ||    
T  55081197 tt 55081196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 238 - 327
Target Start/End: Complemental strand, 2574921 - 2574831
Alignment:
Q  238 aaaaagagggagaagaaaagaatagctcgtcaacacaagctaaat-agggagaagagagaaaagttctttgacaactcaagataacttttg 327  Q
    |||||||||||||||||||||||| |||||||| ||||||||||  |||||||||||| ||||||||||||||||||||||| ||||||||    
T  2574921 aaaaagagggagaagaaaagaatacctcgtcaatacaagctaaaggagggagaagagataaaagttctttgacaactcaagagaacttttg 2574831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 224 - 402
Target Start/End: Original strand, 12613649 - 12613827
Alignment:
Q  224 tccgaagggacagaaaaaagagggagaagaaaagaatagctcgtcaacacaagctaaat-agggagaagagagaaaagttctttgacaactcaagataac 322  Q
    ||||| |||||||||||| |||||| |  |||| ||||||||||||||||||| ||||  |||||||||||||||||||| ||||||||||||||| |||    
T  12613649 tccgacgggacagaaaaa-gagggatattaaaataatagctcgtcaacacaagataaaggagggagaagagagaaaagttatttgacaactcaagagaac 12613747  T
Q  323 ttttggtctgtgaaattgtgagggatgagggctctatttataggtgaggaggttgatgaagatggaaaattggtttaatg 402  Q
    |||| || | || |   |||||  ||||| |||||||||||||||    ||||||||||| ||| |||| | ||||||||    
T  12613748 tttttgtgtctgtataagtgagtaatgagagctctatttataggttcaaaggttgatgaaaatgaaaaacttgtttaatg 12613827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 224 - 294
Target Start/End: Complemental strand, 15020065 - 15019995
Alignment:
Q  224 tccgaagggacagaaaaaagagggagaagaaaagaatagctcgtcaacacaagctaaa-tagggagaagaga 294  Q
    ||||| |||||||||||| |||| ||||||||||||||||| ||||||||||||||||  ||||||||||||    
T  15020065 tccgacgggacagaaaaa-gaggaagaagaaaagaatagcttgtcaacacaagctaaaggagggagaagaga 15019995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 283 - 329
Target Start/End: Complemental strand, 39991468 - 39991422
Alignment:
Q  283 agggagaagagagaaaagttctttgacaactcaagataacttttggt 329  Q
    ||||||||||||||||||||||||||||||| |||| ||||||||||    
T  39991468 agggagaagagagaaaagttctttgacaactaaagagaacttttggt 39991422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 289 - 328
Target Start/End: Complemental strand, 15017546 - 15017507
Alignment:
Q  289 aagagagaaaagttctttgacaactcaagataacttttgg 328  Q
    ||||||||||||||||||||||| ||||||||||||||||    
T  15017546 aagagagaaaagttctttgacaaatcaagataacttttgg 15017507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 23 - 56
Target Start/End: Original strand, 3381691 - 3381724
Alignment:
Q  23 cacacacatttctcatttatatttacattggacc 56  Q
    ||||||| ||||||||||||||||||||||||||    
T  3381691 cacacacttttctcatttatatttacattggacc 3381724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 23 - 56
Target Start/End: Original strand, 3388436 - 3388469
Alignment:
Q  23 cacacacatttctcatttatatttacattggacc 56  Q
    ||||||| ||||||||||||||||||||||||||    
T  3388436 cacacacttttctcatttatatttacattggacc 3388469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 23 - 56
Target Start/End: Original strand, 8093515 - 8093548
Alignment:
Q  23 cacacacatttctcatttatatttacattggacc 56  Q
    ||||||| ||||||||||||||||||||||||||    
T  8093515 cacacacttttctcatttatatttacattggacc 8093548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 23 - 56
Target Start/End: Original strand, 8102320 - 8102353
Alignment:
Q  23 cacacacatttctcatttatatttacattggacc 56  Q
    ||||||| ||||||||||||||||||||||||||    
T  8102320 cacacacttttctcatttatatttacattggacc 8102353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 23 - 56
Target Start/End: Original strand, 19737246 - 19737279
Alignment:
Q  23 cacacacatttctcatttatatttacattggacc 56  Q
    ||||||| ||||||||||||||||||||||||||    
T  19737246 cacacacttttctcatttatatttacattggacc 19737279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 23 - 56
Target Start/End: Complemental strand, 38854164 - 38854131
Alignment:
Q  23 cacacacatttctcatttatatttacattggacc 56  Q
    ||||||| ||||||||||||||||||||||||||    
T  38854164 cacacacttttctcatttatatttacattggacc 38854131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 23 - 56
Target Start/End: Original strand, 39744663 - 39744696
Alignment:
Q  23 cacacacatttctcatttatatttacattggacc 56  Q
    ||||||| ||||||||||||||||||||||||||    
T  39744663 cacacacttttctcatttatatttacattggacc 39744696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 198; Significance: 1e-108; HSPs: 27)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 192 - 451
Target Start/End: Original strand, 39845014 - 39845275
Alignment:
Q  192 taccgaaggaacaaaattctgaagggacttattccgaagggacagaaaaaagagggagaagaaaagaatagctcgtcaacacaagctaaatagggagaag 291  Q
    ||||||||| ||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||    
T  39845014 taccgaagggacaaaattccgaagggacttattccgaagggacagaaaaaggagggagaagaaaagaatagctcgtcaacacaagctaaagagggagaag 39845113  T
Q  292 agagaaaagttctttgacaactcaagataacttttggtctgtgaaattgtgagggatgagggctctatttataggtgaggaggttgatg-aagatggaaa 390  Q
    ||||||||||||||||||||||||||| |||||||||| |||||||||||| || |||||||||||||||||||||||||||||||||| || | |||||    
T  39845114 agagaaaagttctttgacaactcaagagaacttttggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaaaggaaa 39845213  T
Q  391 attggtttaatggaaatgatgaacaattatggtgaa-tttgaaaaaggaatgttaaagttga 451  Q
    | ||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||    
T  39845214 aatggtttaatggaaatgatggacaattatggtgaattttgaaaaaggaatgttaaagttga 39845275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 192 - 451
Target Start/End: Original strand, 39836972 - 39837233
Alignment:
Q  192 taccgaaggaacaaaattctgaagggacttattccgaagggacagaaaaaagagggagaagaaaagaatagctcgtcaacacaagctaaatagggagaag 291  Q
    ||||||||| ||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||    
T  39836972 taccgaagggacaaaattccgaagggacttattccgaagggacagaaaaaggagggagaagaaaagaatagctcgtcaacacaagctaaagagggagaag 39837071  T
Q  292 agagaaaagttctttgacaactcaagataacttttggtctgtgaaattgtgagggatgagggctctatttataggtgaggaggttgatg-aagatggaaa 390  Q
    ||||||||||||||||||||||||||| |||||||||| ||| |||||||| || |||||||||||||||||||||||||||||||||| || | |||||    
T  39837072 agagaaaagttctttgacaactcaagagaacttttggtgtgtcaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaaaggaaa 39837171  T
Q  391 attggtttaatggaaatgatgaacaattatggtgaa-tttgaaaaaggaatgttaaagttga 451  Q
    |  |||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||    
T  39837172 aaaggtttaatggaaatgatggacaattatggtgaattttgaaaaaggaatgttaaagttga 39837233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 193 - 451
Target Start/End: Complemental strand, 32000427 - 32000167
Alignment:
Q  193 accgaaggaacaaaattctgaagggacttattccgaagggacagaaaaaagagggagaagaaaagaatagctcgtcaacacaagctaaatagggagaaga 292  Q
    |||||||| ||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  32000427 accgaagggacaaaattccgaagggacttatttcgaagggacagaaaaaagagggagaagaaaagaatagctcgtcaacacaagctaaaaagggagaaga 32000328  T
Q  293 gagaaaagttctttgacaactcaagataacttttggtctgtgaaattgtgagggatgagggctctatttataggtgaggaggttgatg-aagatggaaaa 391  Q
    |||||||||||||||||||||||||| |||||||||| ||| ||||| || || |||||||||||||||||||||||||||||||||| || |||||||     
T  32000327 gagaaaagttctttgacaactcaagagaacttttggtgtgtaaaattttgtggaatgagggctctatttataggtgaggaggttgatgaaaaatggaaat 32000228  T
Q  392 ttggtttaatggaaatgatgaacaattatggtgaa-tttgaaaaaggaatgttaaagttga 451  Q
    ||||||||| |||||||||| |||||||||||||| |||||||||||||||||||||||||    
T  32000227 ttggtttaacggaaatgatggacaattatggtgaattttgaaaaaggaatgttaaagttga 32000167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 212 - 451
Target Start/End: Original strand, 25858690 - 25858931
Alignment:
Q  212 gaagggacttattccgaagggacagaaaaaagagggagaagaaaagaatagctcgtcaacacaagctaaatagggagaagagagaaaagttctttgacaa 311  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||    
T  25858690 gaagggacttattccgaagggacagaaaaaagagggagaagaaaagaatagctcgtcaacacaagctaaagagggagaagagagaaaagttctttaacaa 25858789  T
Q  312 ctcaagataacttttggtctgtgaaattgtgagggatgagggctctatttataggtgaggaggttgatg-aagatggaaaattggtttaatggaaatgat 410  Q
    ||||||| |||||||||| |||||||||||| ||||||| ||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||    
T  25858790 ctcaagagaacttttggtgtgtgaaattgtgtgggatgatggctctatttataggtgaggaggttgatgaaaaatggaaaattggtttaatggaaatgat 25858889  T
Q  411 gaacaattatggtgaa-tttgaaaaaggaatgttaaagttga 451  Q
    | |||||||||||||| ||| ||||| |||||||||||||||    
T  25858890 ggacaattatggtgaattttaaaaaatgaatgttaaagttga 25858931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 182; E-Value: 3e-98
Query Start/End: Original strand, 212 - 451
Target Start/End: Original strand, 22156408 - 22156648
Alignment:
Q  212 gaagggacttattccgaagggacagaaaaaagagggagaagaaaagaatagctcgtcaacacaagctaaatagggagaagagagaaaagttctttgacaa 311  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  22156408 gaagggacttatttcgaagggacagaaaaaagagggagaagaaaagaatagctcgtcaacacaagctaaagagggagaagagagaaaagttctttgacaa 22156507  T
Q  312 ctcaagataacttttggtctgtgaaattgtgagggatgagggctctatttataggtgaggaggttgatg-aagatggaaaattggtttaatggaaatgat 410  Q
    ||||||| |||||||||| |||||||||||| || ||||||||||||||| |||||||||||||||||| || |||||||||||||||||||||||||||    
T  22156508 ctcaagagaacttttggtatgtgaaattgtgtggaatgagggctctattt-taggtgaggaggttgatgaaaaatggaaaattggtttaatggaaatgat 22156606  T
Q  411 gaacaattatggtgaa-tttgaaaaaggaatgttaaagttga 451  Q
    | |||||||||||||| |||||||||||||| ||||||||||    
T  22156607 ggacaattatggtgaattttgaaaaaggaattttaaagttga 22156648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 180; E-Value: 5e-97
Query Start/End: Original strand, 222 - 451
Target Start/End: Complemental strand, 32007367 - 32007136
Alignment:
Q  222 attccgaagggacagaaaaaagagggagaagaaaagaatagctcgtcaacacaagctaaatagggagaagagagaaaagttctttgacaactcaagataa 321  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||    
T  32007367 attccgaagggacagaaaaaagagggagaagaaaagaatagctcgtcaacacaagctaaaaagggagaagagagaaaagttctttgacaactcaagagaa 32007268  T
Q  322 cttttggtctgtgaaattgtgagggatgagggctctatttataggtgaggaggttgatg-aagatggaaaattggtttaatggaaatgatgaacaattat 420  Q
    |||||||| |||||||||||| || ||||| |||||||||||||||||||||||||||| || |||||||||||||||||||||||||||| ||||||||    
T  32007267 cttttggtgtgtgaaattgtgtggaatgagagctctatttataggtgaggaggttgatgaaaaatggaaaattggtttaatggaaatgatggacaattat 32007168  T
Q  421 ggtgaa-tttgaaaaaggaatgttaaagttga 451  Q
    ||| || |||||||||||||||||||||||||    
T  32007167 ggtaaattttgaaaaaggaatgttaaagttga 32007136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 177; E-Value: 3e-95
Query Start/End: Original strand, 213 - 451
Target Start/End: Original strand, 32025074 - 32025313
Alignment:
Q  213 aagggacttattccgaagggacagaaaaaagagggagaagaaaagaatagctcgtcaacacaagctaaatagggagaagagagaaaagttctttgacaac 312  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  32025074 aagggacttattccgaagggacagaaaaaagagggagaagaaaagaatagctcgtcaacacaagctaaagagggagaagagagaaaagttctttgacaac 32025173  T
Q  313 tcaagataacttttggtctgtgaaattgtgagggatgagggctctatttataggtgaggaggttgatg-aagatggaaaattggtttaatggaaatgatg 411  Q
    |||||| |||||||||| |||||||||||| || ||||||||||||||||||||||| ||| |||||| || | ||||||||||||||||||||||||||    
T  32025174 tcaagagaacttttggtgtgtgaaattgtgtggaatgagggctctatttataggtgatgagtttgatgaaaaaaggaaaattggtttaatggaaatgatg 32025273  T
Q  412 aacaattatggtgaa-tttgaaaaaggaatgttaaagttga 451  Q
     |||||||| ||||| |||||||||||||||||||||||||    
T  32025274 gacaattat-gtgaattttgaaaaaggaatgttaaagttga 32025313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 168; E-Value: 7e-90
Query Start/End: Original strand, 212 - 451
Target Start/End: Original strand, 22162414 - 22162651
Alignment:
Q  212 gaagggacttattccgaagggacagaaaaaagagggagaagaaaagaatagctcgtcaacacaagctaaatagggagaagagagaaaagttctttgacaa 311  Q
    ||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||   ||||||||||||||||||||||||    
T  22162414 gaagggacttatttcgaagggacagaaaaaagagtgagaagaaaagaatagctcgtcaacacaagctaaagag---gaagagagaaaagttctttgacaa 22162510  T
Q  312 ctcaagataacttttggtctgtgaaattgtgagggatgagggctctatttataggtgaggaggttgatg-aagatggaaaattggtttaatggaaatgat 410  Q
    ||||||| |||||||||| |||||||||||| || ||||||||||||||| |||||||||||||||||| || |||||||||||||||||||||||||||    
T  22162511 ctcaagagaacttttggtgtgtgaaattgtgtggaatgagggctctattt-taggtgaggaggttgatgaaaaatggaaaattggtttaatggaaatgat 22162609  T
Q  411 gaacaattatggtgaa-tttgaaaaaggaatgttaaagttga 451  Q
    | |||||||||||||| |||||||||||||||||||||||||    
T  22162610 ggacaattatggtgaattttgaaaaaggaatgttaaagttga 22162651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 168; E-Value: 7e-90
Query Start/End: Original strand, 204 - 451
Target Start/End: Complemental strand, 30938948 - 30938697
Alignment:
Q  204 aaaattctgaagggacttattccgaagggacagaaaaaaga-gggagaagaaaagaatagctcgtcaacacaagctaaatagggagaagagagaaaagtt 302  Q
    ||||||| ||||||||||||||||||||||||||||||| | ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  30938948 aaaattccgaagggacttattccgaagggacagaaaaaaaaagggagaagaaaagaatagctcgttaacacaagctaaatagggagaagagagaaaagtt 30938849  T
Q  303 ctttgacaactcaagataac-ttttggtctgtgaaattgtgagggatgagggctctatttataggtgaggaggttgatg-aagatggaaaattggtttaa 400  Q
    |||||||||||||||| ||| ||||||| |||| ||||||| || |||||||||||||||||||||||||||||||||| || | |||||| ||||||||    
T  30938848 ctttgacaactcaagagaactttttggtgtgtgtaattgtgtggtatgagggctctatttataggtgaggaggttgatgaaaaaaggaaaaatggtttaa 30938749  T
Q  401 tggaaatgatgaacaattatggtgaa-tttgaaaaaggaatgttaaagttga 451  Q
    ||||||||||| |||||||||||||| |||| ||||||||||||||||||||    
T  30938748 tggaaatgatggacaattatggtgaattttggaaaaggaatgttaaagttga 30938697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 237 - 397
Target Start/End: Complemental strand, 13386243 - 13386083
Alignment:
Q  237 aaaaaagagggagaagaaaagaatagctcgtcaacacaagctaaatagggagaagagagaaaagttctttgacaactcaagataacttttggtctgtgaa 336  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    ||||||||||||||| |||||||||| ||||||    
T  13386243 aaaaaagagggagaagaaaagaatagctcgtcaacacaagctaaatagtgagaagagagaaaaaaaatttgacaactcaagagaacttttggtgtgtgaa 13386144  T
Q  337 attgtgagggatgagggctctatttataggtgaggaggttgatgaagatggaaaattggtt 397  Q
    ||||||||| ||||  ||| |||||||||||||||| ||||||||| | |||||| |||||    
T  13386143 attgtgaggaatgaaagctatatttataggtgaggaagttgatgaaaagggaaaaatggtt 13386083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 224 - 328
Target Start/End: Original strand, 2470474 - 2470579
Alignment:
Q  224 tccgaagggacagaaaaaagagggagaagaaaagaatagctcgtcaacacaagctaaa-tagggagaagagagaaaagttctttgacaactcaagataac 322  Q
    ||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||    
T  2470474 tccgaagggacagaaaaaagagggagaggaaaagaatagcccgtcaacacaagctaaaggagggagaagagagaaaagttctttgacaactcaagataac 2470573  T
Q  323 ttttgg 328  Q
    ||||||    
T  2470574 ttttgg 2470579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 331 - 451
Target Start/End: Original strand, 25852562 - 25852684
Alignment:
Q  331 tgtgaaattgtgagggatgagggctctatttataggtgaggaggttgatgaaga-tggaaaattggtttaatggaaatgatgaacaattatggtgaa-tt 428  Q
    |||||||||||| || ||||||||||||| |||| ||||||||||||||||| | ||||||||||||||||||||||||||| |||||| ||||||| ||    
T  25852562 tgtgaaattgtgtggaatgagggctctatctataagtgaggaggttgatgaaaaatggaaaattggtttaatggaaatgatggacaattttggtgaattt 25852661  T
Q  429 tgaaaaaggaatgttaaagttga 451  Q
    |||||||||||||||||||||||    
T  25852662 tgaaaaaggaatgttaaagttga 25852684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 238 - 373
Target Start/End: Complemental strand, 21640744 - 21640609
Alignment:
Q  238 aaaaagagggagaagaaaagaatagctcgtcaacacaagctaaat-agggagaagagagaaaagttctttgacaactcaagataacttttggtctgtgaa 336  Q
    |||||||||||||  |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||  || | |    
T  21640744 aaaaagagggagagaaaaagaatagctcgtcaacacaagctaaatgagggagaagagagaaaagttctttgacaactcaagagaacttttggggtgagta 21640645  T
Q  337 attgtgagggatgagggctctatttataggtgaggag 373  Q
    |  |||| ||| ||| |||||||||||||||||||||    
T  21640644 aaagtga-ggaagagtgctctatttataggtgaggag 21640609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 238 - 328
Target Start/End: Complemental strand, 4543878 - 4543787
Alignment:
Q  238 aaaaagagggagaagaaaagaatagctcgtcaacacaagctaaat-agggagaagagagaaaagttctttgacaactcaagataacttttgg 328  Q
    ||||||||||||| ||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||| |||||||||    
T  4543878 aaaaagagggagaggaaaagaatagctcgtcaacacaagctaaaggagggagaagagagaaaagttctttgacaactcaagagaacttttgg 4543787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 224 - 328
Target Start/End: Original strand, 19954771 - 19954875
Alignment:
Q  224 tccgaagggacagaaaaaagagggagaagaaaagaatagctcgtcaacacaagctaaat-agggagaagagagaaaagttctttgacaactcaagataac 322  Q
    |||||||||| ||||||| |||||||| ||||||||||||||||||||||| ||||||  ||||||||||||||||| |||||||||||||||||| |||    
T  19954771 tccgaagggagagaaaaa-gagggagaggaaaagaatagctcgtcaacacatgctaaaggagggagaagagagaaaaattctttgacaactcaagagaac 19954869  T
Q  323 ttttgg 328  Q
    ||||||    
T  19954870 ttttgg 19954875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 224 - 327
Target Start/End: Original strand, 19950317 - 19950420
Alignment:
Q  224 tccgaagggacagaaaaaagagggagaagaaaagaatagctcgtcaacacaagctaaat-agggagaagagagaaaagttctttgacaactcaagataac 322  Q
    ||||||||||| |||||| |||||||| ||||||||||||||||||||||||  ||||  |||||||||||||||||||||||||||||||||||| |||    
T  19950317 tccgaagggacggaaaaa-gagggagaggaaaagaatagctcgtcaacacaaattaaaggagggagaagagagaaaagttctttgacaactcaagagaac 19950415  T
Q  323 ttttg 327  Q
    |||||    
T  19950416 ttttg 19950420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 208 - 275
Target Start/End: Original strand, 25852494 - 25852561
Alignment:
Q  208 ttctgaagggacttattccgaagggacagaaaaaagagggagaagaaaagaatagctcgtcaacacaa 275  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  25852494 ttctgaagggacttattccgaagggacagaaaaaagaggtagaagaaaagaatagctcgtcaacacaa 25852561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 238 - 281
Target Start/End: Complemental strand, 27235940 - 27235897
Alignment:
Q  238 aaaaagagggagaagaaaagaatagctcgtcaacacaagctaaa 281  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  27235940 aaaaagagggagaagaaaagaatagctcgtcaacacaagctaaa 27235897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 224 - 326
Target Start/End: Original strand, 30779350 - 30779451
Alignment:
Q  224 tccgaagggacagaaaaaagagggagaagaaaagaatagctcgtcaacacaagctaaa-tagggagaagagagaaaagttctttgacaactcaagataac 322  Q
    ||||||||||||  ||||| ||||||||||||| |||| |||||||||||||| ||||   ||||| ||||||||||||| ||| ||||||||| | |||    
T  30779350 tccgaagggaca--aaaaatagggagaagaaaataatatctcgtcaacacaagttaaaggggggagtagagagaaaagttttttaacaactcaaaaaaac 30779447  T
Q  323 tttt 326  Q
    ||||    
T  30779448 tttt 30779451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 224 - 329
Target Start/End: Original strand, 34517697 - 34517802
Alignment:
Q  224 tccgaagggacagaaaaaagagggagaagaaaagaatagctcgtcaacacaagct-aaatagggagaagagagaaaagttctttgacaactcaagataac 322  Q
    ||||| |||||| |||||| ||| |||||||||||||| |||||||||||||| | ||| || || |||||| |||  || |||||||||| ||||||||    
T  34517697 tccgacgggacataaaaaaaagg-agaagaaaagaataactcgtcaacacaagttaaaagagagataagagataaattttttttgacaacttaagataac 34517795  T
Q  323 ttttggt 329  Q
    |||||||    
T  34517796 ttttggt 34517802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 9 - 56
Target Start/End: Complemental strand, 13386426 - 13386379
Alignment:
Q  9 gaaatgaaaggacacacacacatttctcatttatatttacattggacc 56  Q
    ||||| ||| ||||| ||||| ||||||||||||||||||||||||||    
T  13386426 gaaataaaaagacacgcacacttttctcatttatatttacattggacc 13386379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 9 - 56
Target Start/End: Complemental strand, 13386679 - 13386632
Alignment:
Q  9 gaaatgaaaggacacacacacatttctcatttatatttacattggacc 56  Q
    ||||| ||| ||||| ||||| ||||||||||||||||||||||||||    
T  13386679 gaaataaaaagacacgcacacttttctcatttatatttacattggacc 13386632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 23 - 56
Target Start/End: Original strand, 25858514 - 25858547
Alignment:
Q  23 cacacacatttctcatttatatttacattggacc 56  Q
    ||||||| ||||||||||||||||||||||||||    
T  25858514 cacacacttttctcatttatatttacattggacc 25858547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 23 - 56
Target Start/End: Complemental strand, 30939112 - 30939079
Alignment:
Q  23 cacacacatttctcatttatatttacattggacc 56  Q
    ||||||| ||||||||||||||||||||||||||    
T  30939112 cacacacttttctcatttatatttacattggacc 30939079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 23 - 56
Target Start/End: Original strand, 32024886 - 32024919
Alignment:
Q  23 cacacacatttctcatttatatttacattggacc 56  Q
    ||||||| ||||||||||||||||||||||||||    
T  32024886 cacacacttttctcatttatatttacattggacc 32024919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 23 - 56
Target Start/End: Original strand, 39836803 - 39836836
Alignment:
Q  23 cacacacatttctcatttatatttacattggacc 56  Q
    ||||||| ||||||||||||||||||||||||||    
T  39836803 cacacacttttctcatttatatttacattggacc 39836836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 23 - 56
Target Start/End: Original strand, 39844845 - 39844878
Alignment:
Q  23 cacacacatttctcatttatatttacattggacc 56  Q
    ||||||| ||||||||||||||||||||||||||    
T  39844845 cacacacttttctcatttatatttacattggacc 39844878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 198; Significance: 1e-108; HSPs: 39)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 192 - 451
Target Start/End: Original strand, 25505932 - 25506193
Alignment:
Q  192 taccgaaggaacaaaattctgaagggacttattccgaagggacagaaaaaagagggagaagaaaagaatagctcgtcaacacaagctaaatagggagaag 291  Q
    ||||||||| ||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||    
T  25505932 taccgaagggacaaaattccgaagggacttattccgaagggacagaaaaaggagggagaagaaaagaatagctcgtcaacacaagctaaagagggagaag 25506031  T
Q  292 agagaaaagttctttgacaactcaagataacttttggtctgtgaaattgtgagggatgagggctctatttataggtgaggaggttgatg-aagatggaaa 390  Q
    ||||||||||||||||||||||||||| |||||||||| |||||||||||| || |||||||||||||||||||||||||||||||||| || | |||||    
T  25506032 agagaaaagttctttgacaactcaagagaacttttggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaaaggaaa 25506131  T
Q  391 attggtttaatggaaatgatgaacaattatggtgaa-tttgaaaaaggaatgttaaagttga 451  Q
    ||||||||||||||||||| | |||||||||||||| |||||||||||||||||||||||||    
T  25506132 attggtttaatggaaatgaaggacaattatggtgaattttgaaaaaggaatgttaaagttga 25506193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 195 - 451
Target Start/End: Complemental strand, 26897107 - 26896850
Alignment:
Q  195 cgaaggaacaaaattctgaagggacttattccgaagggacagaaaaaagagggagaagaaaagaatagctcgtcaacacaagctaaatagggagaagaga 294  Q
    |||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  26897107 cgaagggacaaaattccgaagggactt-ttccgaagggacagaaaaaagagggagaagaaaagaatagctcatcaacacaagctaaatagggagaagaga 26897009  T
Q  295 gaaaagttctttgacaactcaagataacttttggtctgtgaaattgtgagggatgagggctctatttataggtgaggaggttgatg-aagatggaaaatt 393  Q
    ||||| |||||||||||||||||| |||||||||| | |||||||||| || ||||||||||||||||| |||||||||||||||| || ||||||||||    
T  26897008 gaaaaattctttgacaactcaagagaacttttggtgtttgaaattgtgtggaatgagggctctatttattggtgaggaggttgatgaaaaatggaaaatt 26896909  T
Q  394 ggtttaatggaaatgatgaacaattatggtgaa-tttgaaaaaggaatgttaaagttga 451  Q
    |||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||    
T  26896908 ggtttaatggaaatgatggacaattatggtgaattttgaaaaaggaatgttaaagttga 26896850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 182; E-Value: 3e-98
Query Start/End: Original strand, 212 - 451
Target Start/End: Complemental strand, 19899596 - 19899356
Alignment:
Q  212 gaagggacttattccgaagggacagaaaaaagagggagaagaaaagaatagctcgtcaacacaagctaaatagggagaagagagaaaagttctttgacaa 311  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  19899596 gaagggacttattccgaagggacagaaaaaagagggagaagaaaagaatagctcgtcaacacaagctaaagagggagaagagagaaaagttctttgacaa 19899497  T
Q  312 ctcaagataacttttggtctgtgaaattgtgagggatgagggctctatttataggtgaggaggttgatg-aagatggaaaattggtttaatggaaatgat 410  Q
    ||||||| |||||||||| |||||||||||| || ||||||||||||||||||||||||||| |||||| || | |||||||||||||||||||||||||    
T  19899496 ctcaagagaacttttggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggagtttgatgaaaaaaggaaaattggtttaatggaaatgat 19899397  T
Q  411 gaacaattatggtgaa-tttgaaaaaggaatgttaaagttga 451  Q
    | |||||||| ||||| |||||||||||||||||||||||||    
T  19899396 ggacaattat-gtgaattttgaaaaaggaatgttaaagttga 19899356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 212 - 451
Target Start/End: Complemental strand, 19720484 - 19720244
Alignment:
Q  212 gaagggacttattccgaagggacagaaaaaagagggagaagaaaagaatagctcgtcaacacaagctaaatagggagaagagagaaaagttctttgacaa 311  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |    
T  19720484 gaagggacttattccgaagggacagaaaaaagagggagaagaaaagaatagctcgtcaacacaagctaaagagggagaagagagaaaagttctttgacta 19720385  T
Q  312 ctcaagataacttttggtctgtgaaattgtgagggatgagggctctatttataggtgaggaggttgatg-aagatggaaaattggtttaatggaaatgat 410  Q
    ||||||| |||||||||| |||||||||||| || ||||||||||||||||||||| ||||| |||||| || | |||||||||||||||||||||||||    
T  19720384 ctcaagagaacttttggtgtgtgaaattgtgtggaatgagggctctatttataggtcaggagtttgatgaaaaaaggaaaattggtttaatggaaatgat 19720285  T
Q  411 gaacaattatggtgaa-tttgaaaaaggaatgttaaagttga 451  Q
    | |||||||| ||||| |||||||||||||||||||||||||    
T  19720284 ggacaattat-gtgaattttgaaaaaggaatgttaaagttga 19720244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 171; E-Value: 1e-91
Query Start/End: Original strand, 192 - 451
Target Start/End: Original strand, 22778526 - 22778784
Alignment:
Q  192 taccgaaggaacaaaattctgaagggacttattccgaagggacagaaaaaagagggagaagaaaagaatagctcgtcaacacaagctaaatagggagaag 291  Q
    ||||||||||||||||||| ||||||||||  ||||||||||||||||||||  ||||||| |||||||||||||||||||||||||||  |||||||||    
T  22778526 taccgaaggaacaaaattccgaagggactt--tccgaagggacagaaaaaaggaggagaagtaaagaatagctcgtcaacacaagctaag-agggagaag 22778622  T
Q  292 agagaaaagttctttgacaactcaagataacttttggtctgtgaaattgtgagggatgagggctctatttataggtgaggaggttgatg-aagatggaaa 390  Q
    ||||||||||||||||||||||||| | |||||||||| |||||||||||| || |||||||||||||||||||||||||||||||||| || |||||||    
T  22778623 agagaaaagttctttgacaactcaatagaacttttggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaatggaaa 22778722  T
Q  391 attggtttaatggaaatgatgaacaattatggtgaa-tttgaaaaaggaatgttaaagttga 451  Q
    ||||||||||||||||||||| |||||||||||||| |||||||| ||||||| ||||||||    
T  22778723 attggtttaatggaaatgatggacaattatggtgaattttgaaaatggaatgtcaaagttga 22778784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 170; E-Value: 5e-91
Query Start/End: Original strand, 193 - 451
Target Start/End: Original strand, 12666942 - 12667199
Alignment:
Q  193 accgaaggaacaaaattctgaagggacttattccgaagggacagaaaaaagagggagaagaaaagaatagctcgtcaacacaagctaaatagggagaaga 292  Q
    |||||||| ||||||||| |||||||||| |||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||    
T  12666942 accgaagggacaaaattccgaagggactt-ttccgaagggacagaaaaaagaggaagaagaaaagaatagctcgttaacacaagctaaatagggagaaga 12667040  T
Q  293 gagaaaagttctttgacaactcaagataacttttggtctgtgaaattgtgagggatgagggctctatttataggtgaggaggttgatg-aagatggaaaa 391  Q
    ||||||||||| ||||||||||  || |||||||| | |||||||||||| || |||||||||||||||||||||||||||||||||| || | ||||||    
T  12667041 gagaaaagttcattgacaactc--gagaacttttgatgtgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaaaggaaaa 12667138  T
Q  392 ttggtttaatggaaatgatgaacaattatggtgaa-tttgaaaaaggaatgttaaagttga 451  Q
    ||||||||||| |||||||| |||||||||||||| |||||||||||||||||||||||||    
T  12667139 ttggtttaatgaaaatgatggacaattatggtgaattttgaaaaaggaatgttaaagttga 12667199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 170; E-Value: 5e-91
Query Start/End: Original strand, 193 - 449
Target Start/End: Complemental strand, 18909744 - 18909489
Alignment:
Q  193 accgaaggaacaaaattctgaagggacttattccgaagggacagaaaaaagagggagaagaaaagaatagctcgtcaacacaagctaaatagggagaaga 292  Q
    |||||||| |||||||||  ||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18909744 accgaagggacaaaattcccaagggactttttc-gaagggacagaaaaaagagggagaagaaaagaatagctcgtcaacacaagctaaatagggagaaga 18909646  T
Q  293 gagaaaagttctttgacaactcaagataacttttggtctgtgaaattgtgagggatgagggctctatttataggtgaggaggttgatgaagatggaaaat 392  Q
    |||||||||||||||||||||||||| || |||| |  ||| ||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||    
T  18909645 gagaaaagttctttgacaactcaagagaattttttg-gtgtcaaattgtgagggatgagggctctatttataggtgaagaggttgatgaaaatggaaaat 18909547  T
Q  393 tggtttaatggaaatgatgaacaattatggtgaa-tttgaaaaaggaatgttaaagtt 449  Q
    |||||||||| |||||||| | ||| |||||||| ||||||||| |||||||||||||    
T  18909546 tggtttaatgaaaatgatggaaaatgatggtgaattttgaaaaatgaatgttaaagtt 18909489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 193 - 451
Target Start/End: Original strand, 20452053 - 20452312
Alignment:
Q  193 accgaaggaacaaaattctgaagggacttattccgaagggacagaaaaaagagggagaagaaaagaatagctcgtcaacacaagctaaatagggagaaga 292  Q
    |||||||| ||||||||| |||||||||||||| |||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  20452053 accgaagggacaaaattccgaagggacttattctgaagggacagaaaa-agagggagaagaaaagaatagctcgttaacacaagctaaatagggagaaga 20452151  T
Q  293 gagaaaagttctttgacaactcaagataacttttggtctgtgaaattgtgagggatgagggctctatttataggtgaggaggttgatg-aagatggaaaa 391  Q
    ||||||||||| |||||||||||||| |||||||||| |||| ||||||| || |||| ||||||||||||||||||||| ||||||| || | ||||||    
T  20452152 gagaaaagttcattgacaactcaagagaacttttggtgtgtgtaattgtgtggaatgatggctctatttataggtgaggaagttgatgaaaaaaggaaaa 20452251  T
Q  392 ttggtttaatggaaatgatgaacaattatggtgaa-tttgaaaaaggaatgttaaagttga 451  Q
    || ||||||||||||||||| | |||||||||||| |||||||||||||||||||||||||    
T  20452252 ttagtttaatggaaatgatggagaattatggtgaattttgaaaaaggaatgttaaagttga 20452312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 193 - 451
Target Start/End: Original strand, 20458870 - 20459129
Alignment:
Q  193 accgaaggaacaaaattctgaagggacttattccgaagggacagaaaaaagagggagaagaaaagaatagctcgtcaacacaagctaaatagggagaaga 292  Q
    |||||||| ||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  20458870 accgaagggacaaaattccgaagggacttattccgaagggacagaaaa-agagggagaagaaaagaatagctcgttaacacaagctaaatagggagaaga 20458968  T
Q  293 gagaaaagttctttgacaactcaagataacttttggtctgtgaaattgtgagggatgagggctctatttataggtgaggaggttgatg-aagatggaaaa 391  Q
    |||||||||||||||||||||||||| |||||||||| |||| ||||||| || |||||||||||||||||| |||| ||| || ||| || | | ||||    
T  20458969 gagaaaagttctttgacaactcaagagaacttttggtgtgtgtaattgtgtggaatgagggctctatttatatgtgatgagttttatgaaaaaagaaaaa 20459068  T
Q  392 ttggtttaatggaaatgatgaacaattatggtgaa-tttgaaaaaggaatgttaaagttga 451  Q
    |||||||||||||||||||| | |||||||||||| |||||||||||||||||||||||||    
T  20459069 ttggtttaatggaaatgatggagaattatggtgaattttgaaaaaggaatgttaaagttga 20459129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 167; E-Value: 3e-89
Query Start/End: Original strand, 192 - 451
Target Start/End: Original strand, 22764277 - 22764535
Alignment:
Q  192 taccgaaggaacaaaattctgaagggacttattccgaagggacagaaaaaagagggagaagaaaagaatagctcgtcaacacaagctaaatagggagaag 291  Q
    ||||||||||||||||||  ||||||||||  ||||||||||||||||||||  |||||||||||||||||||||||||||||||||||  |||||||||    
T  22764277 taccgaaggaacaaaatttcgaagggactt--tccgaagggacagaaaaaaggaggagaagaaaagaatagctcgtcaacacaagctaag-agggagaag 22764373  T
Q  292 agagaaaagttctttgacaactcaagataacttttggtctgtgaaattgtgagggatgagggctctatttataggtgaggaggttgatg-aagatggaaa 390  Q
    ||||||||||||||||||||||||| | |||||||||| | |||||||||| || ||||| |||||||||||||||||||||||||||| || |||||||    
T  22764374 agagaaaagttctttgacaactcaatagaacttttggtgtctgaaattgtgtggaatgagagctctatttataggtgaggaggttgatgaaaaatggaaa 22764473  T
Q  391 attggtttaatggaaatgatgaacaattatggtgaa-tttgaaaaaggaatgttaaagttga 451  Q
    ||||||||||||||||||||| |||||||||||||| |||||||||||||||| ||||||||    
T  22764474 attggtttaatggaaatgatggacaattatggtgaattttgaaaaaggaatgtcaaagttga 22764535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 163; E-Value: 7e-87
Query Start/End: Original strand, 204 - 451
Target Start/End: Original strand, 35091082 - 35091330
Alignment:
Q  204 aaaattctgaagggacttattccgaagggacagaaaaaagagggagaagaaaagaatagctcgtcaacacaagctaaatagggagaagagagaaaagttc 303  Q
    ||||||| |||||||||| |||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  35091082 aaaattccgaagggactt-ttccgaagggacagaaaaaa-agggagaagaaaagaatagctcgttaacacaagctaaatagggagaagagagaaaagttc 35091179  T
Q  304 tttgacaactcaagataac-ttttggtctgtgaaattgtgagggatgagggctctatttataggtgaggaggttgatg-aagatggaaaattggtttaat 401  Q
    ||||||||||||||| ||| ||||||| |||| ||||||| || |||||||||||||||||||||||||||||||||| || | |||||| |||||||||    
T  35091180 tttgacaactcaagagaactttttggtgtgtgtaattgtgtggtatgagggctctatttataggtgaggaggttgatgaaaaaaggaaaaatggtttaat 35091279  T
Q  402 ggaaatgatgaacaattatggtgaa-tttgaaaaaggaatgttaaagttga 451  Q
    |||||||||| |||||||||||||| |||| ||||||||||||||||||||    
T  35091280 ggaaatgatggacaattatggtgaattttggaaaaggaatgttaaagttga 35091330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 162; E-Value: 3e-86
Query Start/End: Original strand, 193 - 451
Target Start/End: Original strand, 22232012 - 22232272
Alignment:
Q  193 accgaaggaacaaaattctgaagggacttattccgaagggacagaaaa-aagagggagaagaaaagaatagctcgtcaacacaagctaaatagggagaag 291  Q
    |||||||| ||||||||| |||||||||| | |||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  22232012 accgaagggacaaaattccgaagggactt-tcccgaagggacagaaaaaaagagggagaggaaaagaatagctcgtcaacacaagctaaatagggagaag 22232110  T
Q  292 agagaaaagttctttgacaactcaagataacttttggtctgtgaaattgtgagggatgagggctctatttataggtgaggaggttgatg-aagatggaaa 390  Q
    ||||||||||||||||||||||||||| |||||||||| |||||||||||| || ||||||||| ||||||||||||  |||||||||| || | |||||    
T  22232111 agagaaaagttctttgacaactcaagagaacttttggtgtgtgaaattgtgtggaatgagggctatatttataggtggagaggttgatgaaaaaaggaaa 22232210  T
Q  391 attggtttaatggaaatgatgaacaattatggtgaa-tttgaaaaaggaatgttaaagttga 451  Q
    ||||||||||||||||||||| |||||||||||||| ||| |||||| |||| |||||||||    
T  22232211 attggtttaatggaaatgatggacaattatggtgaattttcaaaaagaaatgataaagttga 22232272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 161; E-Value: 1e-85
Query Start/End: Original strand, 212 - 451
Target Start/End: Original strand, 3917014 - 3917259
Alignment:
Q  212 gaagggacttattccgaagggacagaaaaaagagggagaagaaaagaatagctcgtcaacacaagctaaatagggagaagagagaaaagttctttgacaa 311  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  3917014 gaagggacttatttcgaagggacagaaaaaagagggagaagaaaagaaaagctcgtcaacacaagctaaattgggagaagagagaaaagttctttgacaa 3917113  T
Q  312 ctcaagataacttttggtct----gtgaaattgtgagggatgagggctctatttataggtgaggaggttgatg-aagatggaaaattggtttaatggaaa 406  Q
    ||||||| |||||||||| |    ||||||||||| || ||||||||||||||||||| |||||||||||||| || | |||||| ||||||||||||||    
T  3917114 ctcaagagaacttttggtgtgtacgtgaaattgtgtggaatgagggctctatttatagatgaggaggttgatgaaaaaaggaaaaatggtttaatggaaa 3917213  T
Q  407 tgatgaacaattatggtgaa-tttgaaaaaggaatgttaaagttga 451  Q
    ||||| ||||||||| |||| |||||||||||||||||||||||||    
T  3917214 tgatggacaattatgatgaattttgaaaaaggaatgttaaagttga 3917259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 158; E-Value: 7e-84
Query Start/End: Original strand, 212 - 451
Target Start/End: Original strand, 10984497 - 10984742
Alignment:
Q  212 gaagggacttattccgaagggacagaaaaaagagggagaagaaaagaatagctcgtcaacacaagctaaatagggagaagagagaaaagttctttgacaa 311  Q
    |||| |||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||| ||||||||    
T  10984497 gaagagacttatttcgaagggacagaaaaaagagggagaagaaaagaatagctcgttaacacaagctaaacagggagaagagagaaaagttttttgacaa 10984596  T
Q  312 ctcaagataacttttggtctgtgaaattgtgagggatgagggctctatttataggtgaggaggttgat-----gaagatggaaaattggtttaatggaaa 406  Q
    ||||||| |||||||||| |||||||||||| || |||||||||||||||||| |||||||| |||||      || | |||||||||||||||||||||    
T  10984597 ctcaagagaacttttggtgtgtgaaattgtgtggaatgagggctctatttatatgtgaggagtttgataaaaaaaaaaaggaaaattggtttaatggaaa 10984696  T
Q  407 tgatgaacaattatggtgaa-tttgaaaaaggaatgttaaagttga 451  Q
    ||||| |||||||||||||| |||||||||||||||||||||||||    
T  10984697 tgatggacaattatggtgaattttgaaaaaggaatgttaaagttga 10984742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 158; E-Value: 7e-84
Query Start/End: Original strand, 212 - 451
Target Start/End: Original strand, 30823947 - 30824191
Alignment:
Q  212 gaagggacttattccgaagggacagaaaaaaga-gggagaagaaaagaatagctcgtcaacacaagctaaatagggagaagagagaaaagttctttgaca 310  Q
    ||||||||||||||||||||||||||||||| | ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  30823947 gaagggacttattccgaagggacagaaaaaaaaagggagaagaaaagaatagctcgttaacacaagctaaatagggagaagagagaaaagttctttgaca 30824046  T
Q  311 actcaagataac-ttttggtctgtgaaattgtgagggatgagggctctatttataggtgaggaggttgatg-aagatggaaaattggtttaatggaaatg 408  Q
    |||||||| ||| ||||||| ||| |||||||| |  |||||||||||||||||||||||||||||||||| || | |||||| ||||||||||||||||    
T  30824047 actcaagagaactttttggtgtgtcaaattgtgtgaaatgagggctctatttataggtgaggaggttgatgaaaaaaggaaaaatggtttaatggaaatg 30824146  T
Q  409 atgaacaattatggtgaa--tttgaaaaaggaatgttaaagttga 451  Q
    | | ||||||||||||||  |||||||||||||||||||||||||    
T  30824147 aaggacaattatggtgaatttttgaaaaaggaatgttaaagttga 30824191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 222 - 447
Target Start/End: Original strand, 28702320 - 28702547
Alignment:
Q  222 attccgaagggacagaaaaaagagggagaagaaaagaatagctcgtcaacacaagctaaatagggagaagagagaaaagttctttgacaactcaagataa 321  Q
    |||||||||||||||||||||||||||||  |||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||    
T  28702320 attccgaagggacagaaaaaagagggagagaaaaataatagctcgtcaacacaagctaaatagggagaagagataaaagttctttgacaactcaagagaa 28702419  T
Q  322 cttttggtctgtgaaattgtgagggatgagggctctatttataggtgaggaggttgatg-aagatggaaaattggtttaatggaaatgatgaacaattat 420  Q
    ||||| || |||||||||||| || || || ||||||||||||||||||||| |||||| || | |||||||||||||||||||||| ||| |||| |||    
T  28702420 ctttttgtgtgtgaaattgtgtggaataagagctctatttataggtgaggagtttgatgaaaaaaggaaaattggtttaatggaaataatggacaactat 28702519  T
Q  421 ggtgaa-tttgaaaaaggaatgttaaag 447  Q
    |||||| |||||||||||||||||||||    
T  28702520 ggtgaattttgaaaaaggaatgttaaag 28702547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 283 - 449
Target Start/End: Complemental strand, 19714257 - 19714090
Alignment:
Q  283 agggagaagagagaaaagttctttgacaactcaagataacttttggtctgtgaaattgtgagggatgagggctctatttataggtgaggaggttgatg-a 381  Q
    |||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||| || ||||||||||||||||||||||||||| |||||| |    
T  19714257 agggagaagagagaaaagttctttgacaactcaagagaacttttggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggagtttgatgaa 19714158  T
Q  382 agatggaaaattggtttaatggaaatgatgaacaattatggtgaa-tttgaaaaaggaatgttaaagtt 449  Q
    | | |||||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||    
T  19714157 aaaaggaaaattggtttaatggaaatgatggacaattat-gtgaattttgaaaaaggaatgttaaagtt 19714090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 192 - 359
Target Start/End: Original strand, 29600837 - 29601002
Alignment:
Q  192 taccgaaggaacaaaattctgaagggacttattccgaagggacagaaaaaagagggagaagaaaagaatagctcgtcaacacaagctaaatagggagaag 291  Q
    ||||||||| ||||||||  |||||||||||||||||| |||||||||||  ||||| || |||| |||||||||| |||| ||||||| ||||||||||    
T  29600837 taccgaagggacaaaatttcgaagggacttattccgaaaggacagaaaaat-agggaaaa-aaaataatagctcgttaacataagctaagtagggagaag 29600934  T
Q  292 agagaaaagttctttgacaactcaagataacttttggtctgtgaaattgtgagggatgagggctctat 359  Q
    ||||||||||||||||||||||||||| || |||| || ||||||||||||||| |||||||||||||    
T  29600935 agagaaaagttctttgacaactcaagagaaattttagtgtgtgaaattgtgaggaatgagggctctat 29601002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 224 - 329
Target Start/End: Original strand, 14042142 - 14042247
Alignment:
Q  224 tccgaagggacagaaaaaagagggagaagaaaagaatagctcgtcaacacaagctaaa-tagggagaagagagaaaagttctttgacaactcaagataac 322  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||  |||    
T  14042142 tccgaagggacagaaaa-agagggagaagaaaagaatagctcgtcaacacaagctaaaggagggagaagagagaaaagttctttgacaactcaagggaac 14042240  T
Q  323 ttttggt 329  Q
    |||||||    
T  14042241 ttttggt 14042247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 222 - 318
Target Start/End: Original strand, 7245001 - 7245097
Alignment:
Q  222 attccgaagggacagaaaaaagagggagaagaaaagaatagctcgtcaacacaagctaaatagggagaagagagaaaagttctttgacaactcaaga 318  Q
    |||||||||||||| ||||||||||||||| ||||||| | ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  7245001 attccgaagggacataaaaaagagggagaaaaaaagaagaactcgtcaacacaagctaaatagggagaagagtgaaaagttctttgacaactcaaga 7245097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 193 - 373
Target Start/End: Complemental strand, 28002506 - 28002323
Alignment:
Q  193 accgaaggaacaaaattctgaagggacttattccgaagggacagaaaaaagagggagaagaaaagaatagctcgtcaacacaagcta--aat-agggaga 289  Q
    |||||||||||||||||  |||||||||| ||||||||||||| ||| ||   |  |  ||||||||||||||||||||||| | ||  ||| |||||||    
T  28002506 accgaaggaacaaaatttcgaagggactttttccgaagggacaaaaataattagagggggaaaagaatagctcgtcaacacatgttataaatgagggaga 28002407  T
Q  290 agagagaaaagttctttgacaactcaagataacttttggtctgtgaaattgtgagggatgagggctctatttataggtgaggag 373  Q
    ||||||||||||||||||||| ||||||| || |||| || |||||||||||| || |||   |||||||||||||||||||||    
T  28002406 agagagaaaagttctttgacagctcaagagaattttttgtatgtgaaattgtgtggaatgtcagctctatttataggtgaggag 28002323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 239 - 373
Target Start/End: Complemental strand, 28969626 - 28969491
Alignment:
Q  239 aaaagagggagaagaaaagaatagctcgtcaacacaagctaaa-tagggagaagagagaaaagttctttgacaactcaagataacttttggtctgtgaaa 337  Q
    |||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||| || | ||||||||||||| || ||||||| |||  |     
T  28969626 aaaagagggagaagaaaagaatagctcgtcaacacaagctaaaggagggagaagagagaaaaattgtatgacaactcaagagaagttttggtgtgtctat 28969527  T
Q  338 ttgtgagggatgagggctctatttataggtgaggag 373  Q
      || ||| ||||| |||||||||||||||||||||    
T  28969526 aagtaaggaatgagagctctatttataggtgaggag 28969491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 238 - 328
Target Start/End: Complemental strand, 32814654 - 32814563
Alignment:
Q  238 aaaaagagggagaagaaaagaatagctcgtcaacacaagctaaa-tagggagaagagagaaaagttctttgacaactcaagataacttttgg 328  Q
    ||||||||||||| ||||||||||||||||||||||||||||||  || ||||||||||||||||||||||| ||||||||| |||||||||    
T  32814654 aaaaagagggagaggaaaagaatagctcgtcaacacaagctaaaggagagagaagagagaaaagttctttgataactcaagagaacttttgg 32814563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 384 - 451
Target Start/End: Original strand, 7245112 - 7245180
Alignment:
Q  384 atggaaaattggtttaatggaaatgatgaacaattatggtgaa-tttgaaaaaggaatgttaaagttga 451  Q
    ||||||||||||||||||| |||||||| |||||||||||||| |||||||||||||||||||||||||    
T  7245112 atggaaaattggtttaatgaaaatgatggacaattatggtgaattttgaaaaaggaatgttaaagttga 7245180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 224 - 328
Target Start/End: Original strand, 35130124 - 35130228
Alignment:
Q  224 tccgaagggacagaaaaaagagggagaagaaaagaatagctcgtcaacacaagctaaa-tagggagaagagagaaaagttctttgacaactcaagataac 322  Q
    ||||||||||||||||| ||||||||| ||||||||||| | |||||| |||||||||  |||||||||||||||||    ||||||||||||||| |||    
T  35130124 tccgaagggacagaaaa-agagggagaggaaaagaatagattgtcaacccaagctaaaggagggagaagagagaaaaaaaatttgacaactcaagagaac 35130222  T
Q  323 ttttgg 328  Q
    ||||||    
T  35130223 ttttgg 35130228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 227 - 329
Target Start/End: Original strand, 14776044 - 14776146
Alignment:
Q  227 gaagggacagaaaaaagagggagaagaaaagaatagctcgtcaacacaagctaaat-agggagaagagagaaaagttctttgacaactcaagataacttt 325  Q
    |||||||||||||||| ||||| ||||||| |||||||||||||  | ||||||||  ||||||| ||||||||  | ||||||||||||||| ||||||    
T  14776044 gaagggacagaaaaaaaagggaaaagaaaaaaatagctcgtcaagcctagctaaatgggggagaaaagagaaaaaat-tttgacaactcaagagaacttt 14776142  T
Q  326 tggt 329  Q
    ||||    
T  14776143 tggt 14776146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 212 - 253
Target Start/End: Complemental strand, 19714289 - 19714248
Alignment:
Q  212 gaagggacttattccgaagggacagaaaaaagagggagaaga 253  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  19714289 gaagggacttattccgaagggacagaaaaaagagggagaaga 19714248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 9 - 56
Target Start/End: Original strand, 7244797 - 7244848
Alignment:
Q  9 gaaatgaaaggacacacacaca----tttctcatttatatttacattggacc 56  Q
    ||||| ||||||||||||||||    ||||||||||||||||||||||||||    
T  7244797 gaaataaaaggacacacacacacatttttctcatttatatttacattggacc 7244848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 192 - 234
Target Start/End: Complemental strand, 12663286 - 12663244
Alignment:
Q  192 taccgaaggaacaaaattctgaagggacttattccgaagggac 234  Q
    ||||||||| ||||||||| |||||||||||||| ||||||||    
T  12663286 taccgaagggacaaaattccgaagggacttattctgaagggac 12663244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 222 - 298
Target Start/End: Complemental strand, 2699639 - 2699562
Alignment:
Q  222 attccgaagggacagaaaaaagagggagaagaaaagaatagctcgtcaacacaag-ctaaatagggagaagagagaaa 298  Q
    ||||||||||||||||||||||  |  ||||| |||||   |||||||||||||| | ||| ||||||||||||||||    
T  2699639 attccgaagggacagaaaaaaggagatgaagagaagaaagactcgtcaacacaagtcaaaaaagggagaagagagaaa 2699562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 23 - 56
Target Start/End: Complemental strand, 12663455 - 12663422
Alignment:
Q  23 cacacacatttctcatttatatttacattggacc 56  Q
    ||||||| ||||||||||||||||||||||||||    
T  12663455 cacacacttttctcatttatatttacattggacc 12663422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 23 - 56
Target Start/End: Original strand, 12666790 - 12666823
Alignment:
Q  23 cacacacatttctcatttatatttacattggacc 56  Q
    ||||||| ||||||||||||||||||||||||||    
T  12666790 cacacacttttctcatttatatttacattggacc 12666823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 23 - 56
Target Start/End: Complemental strand, 19714475 - 19714442
Alignment:
Q  23 cacacacatttctcatttatatttacattggacc 56  Q
    ||||||| ||||||||||||||||||||||||||    
T  19714475 cacacacttttctcatttatatttacattggacc 19714442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 23 - 56
Target Start/End: Complemental strand, 19720670 - 19720637
Alignment:
Q  23 cacacacatttctcatttatatttacattggacc 56  Q
    ||||||| ||||||||||||||||||||||||||    
T  19720670 cacacacttttctcatttatatttacattggacc 19720637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 23 - 56
Target Start/End: Original strand, 25505763 - 25505796
Alignment:
Q  23 cacacacatttctcatttatatttacattggacc 56  Q
    ||||||| ||||||||||||||||||||||||||    
T  25505763 cacacacttttctcatttatatttacattggacc 25505796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 23 - 56
Target Start/End: Complemental strand, 26897296 - 26897263
Alignment:
Q  23 cacacacatttctcatttatatttacattggacc 56  Q
    ||||||| ||||||||||||||||||||||||||    
T  26897296 cacacacttttctcatttatatttacattggacc 26897263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 23 - 56
Target Start/End: Original strand, 29600666 - 29600699
Alignment:
Q  23 cacacacatttctcatttatatttacattggacc 56  Q
    ||||||| ||||||||||||||||||||||||||    
T  29600666 cacacacttttctcatttatatttacattggacc 29600699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 23 - 56
Target Start/End: Original strand, 30823760 - 30823793
Alignment:
Q  23 cacacacatttctcatttatatttacattggacc 56  Q
    ||||||| ||||||||||||||||||||||||||    
T  30823760 cacacacttttctcatttatatttacattggacc 30823793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 207 - 235
Target Start/End: Complemental strand, 12663256 - 12663228
Alignment:
Q  207 attctgaagggacttattccgaagggaca 235  Q
    |||||||||||||||||||||||||||||    
T  12663256 attctgaagggacttattccgaagggaca 12663228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 198; Significance: 1e-108; HSPs: 44)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 212 - 451
Target Start/End: Complemental strand, 25533509 - 25533268
Alignment:
Q  212 gaagggacttattccgaagggacagaaaaaagagggagaagaaaagaatagctcgtcaacacaagctaaatagggagaagagagaaaagttctttgacaa 311  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  25533509 gaagggacttattccgaagggacagaaaaaagagggagaagaaaagaatagctcgtcaacacaagctaaagagggagaagagagaaaagttctttgacaa 25533410  T
Q  312 ctcaagataacttttggtctgtgaaattgtgagggatgagggctctatttataggtgaggaggttgatg-aagatggaaaattggtttaatggaaatgat 410  Q
    ||||||| |||||||||| |||||||||||| || |||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||    
T  25533409 ctcaagagaacttttggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaatggaaaattggtttaatggaaatgat 25533310  T
Q  411 gaacaattatggtgaat-ttgaaaaaggaatgttaaagttga 451  Q
    | ||||||||||||||| ||||||||||||||||||||||||    
T  25533309 ggacaattatggtgaatattgaaaaaggaatgttaaagttga 25533268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 192 - 451
Target Start/End: Complemental strand, 28844596 - 28844335
Alignment:
Q  192 taccgaaggaacaaaattctgaagggacttattccgaagggacagaaaaaagagggagaagaaaagaatagctcgtcaacacaagctaaatagggagaag 291  Q
    ||||||||| ||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||    
T  28844596 taccgaagggacaaaattccgaagggacttattccgaagggacagaaaaaggagggagaagaaaagaatagctcgtcaacacaagctaaagagggagaag 28844497  T
Q  292 agagaaaagttctttgacaactcaagataacttttggtctgtgaaattgtgagggatgagggctctatttataggtgaggaggttgatg-aagatggaaa 390  Q
    ||||||||||||||||||||||||||| |||||||||| |||||||||||| || |||||||||||||||||||||||||||||||||| || | |||||    
T  28844496 agagaaaagttctttgacaactcaagagaacttttggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaaaggaaa 28844397  T
Q  391 attggtttaatggaaatgatgaacaattatggtgaa-tttgaaaaaggaatgttaaagttga 451  Q
    | ||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||    
T  28844396 aatggtttaatggaaatgatggacaattatggtgaattttgaaaaaggaatgttaaagttga 28844335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 192 - 451
Target Start/End: Complemental strand, 28853206 - 28852945
Alignment:
Q  192 taccgaaggaacaaaattctgaagggacttattccgaagggacagaaaaaagagggagaagaaaagaatagctcgtcaacacaagctaaatagggagaag 291  Q
    ||||||||| ||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||    
T  28853206 taccgaagggacaaaattccgaagggacttattccgaagggacagaaaaaggagggagaagaaaagaatagctcgtcaacacaagctaaagagggagaag 28853107  T
Q  292 agagaaaagttctttgacaactcaagataacttttggtctgtgaaattgtgagggatgagggctctatttataggtgaggaggttgatg-aagatggaaa 390  Q
    ||||||||||||||||||||||||||| |||||||||| |||||||||||| || |||||||||||||||||||||||||||||||||| || | |||||    
T  28853106 agagaaaagttctttgacaactcaagagaacttttggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaaaggaaa 28853007  T
Q  391 attggtttaatggaaatgatgaacaattatggtgaa-tttgaaaaaggaatgttaaagttga 451  Q
    | ||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||    
T  28853006 aatggtttaatggaaatgatggacaattatggtgaattttgaaaaaggaatgttaaagttga 28852945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 192 - 451
Target Start/End: Original strand, 20639264 - 20639525
Alignment:
Q  192 taccgaaggaacaaaattctgaagggacttattccgaagggacagaaaaaagagggagaagaaaagaatagctcgtcaacacaagctaaatagggagaag 291  Q
    ||||||||  ||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20639264 taccgaagagacaaaattccgaagggacttattccgaaggaacagaaaaaagagggagaagaaaagaatagctcgtcaacacaagctaaatagggagaag 20639363  T
Q  292 agagaaaagttctttgacaactcaagataacttttggtctgtgaaattgtgagggatgagggctctatttataggtgaggaggttgatg-aagatggaaa 390  Q
    |||||||||||||||||||| |||||| |||||||||| |||||||||||| || ||||| |||||||||||||||||||||||||||| || |||||||    
T  20639364 agagaaaagttctttgacaattcaagagaacttttggtgtgtgaaattgtgtggaatgagagctctatttataggtgaggaggttgatgaaaaatggaaa 20639463  T
Q  391 attggtttaatggaaatgatgaacaattatggtgaa-tttgaaaaaggaatgttaaagttga 451  Q
    ||||||||||||||||||||| |||||||||||||| ||||||||| |||||||||||||||    
T  20639464 attggtttaatggaaatgatggacaattatggtgaattttgaaaaaagaatgttaaagttga 20639525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 212 - 451
Target Start/End: Complemental strand, 36455275 - 36455034
Alignment:
Q  212 gaagggacttattccgaagggacagaaaaaagagggagaagaaaagaatagctcgtcaacacaagctaaatagggagaagagagaaaagttctttgacaa 311  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  36455275 gaagggacttattccgaagggacagaaaaaagagggagaagaaaagaatagctcgtcaacacaagctaaagagggagaagagagaaaagttctttgacaa 36455176  T
Q  312 ctcaagataacttttggtctgtgaaattgtgagggatgagggctctatttataggtgaggaggttgatg-aagatggaaaattggtttaatggaaatgat 410  Q
    ||||||| |||||||||| |||||||||||| || |||||||||||||||||||||||||||||||||| || ||||||||||| |||||||||||||||    
T  36455175 ctcaagagaacttttggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaatggaaaattgatttaatggaaatgat 36455076  T
Q  411 gaacaattatggtgaa-tttgaaaaaggaatgttaaagttga 451  Q
    | |||||||||||||| |||||||||||||||||||||||||    
T  36455075 ggacaattatggtgaattttgaaaaaggaatgttaaagttga 36455034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 212 - 451
Target Start/End: Complemental strand, 25526826 - 25526586
Alignment:
Q  212 gaagggacttattccgaagggacagaaaaaagagggagaagaaaagaatagctcgtcaacacaagctaaatagggagaagagagaaaagttctttgacaa 311  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  25526826 gaagggacttattccgaagggac-gaaaaaagagggagaagaaaagaatagctcgtcaacacaagctaaagagggagaagagagaaaagttctttgacaa 25526728  T
Q  312 ctcaagataacttttggtctgtgaaattgtgagggatgagggctctatttataggtgaggaggttgatg-aagatggaaaattggtttaatggaaatgat 410  Q
    ||||||| |||||||||| |||||||||||| || |||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||    
T  25526727 ctcaagagaacttttggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaatggaaaattggtttaatggaaatgat 25526628  T
Q  411 gaacaattatggtgaa-tttgaaaaaggaatgttaaagttga 451  Q
    | |||||||||||||| |||||||||||||||||||||||||    
T  25526627 ggacaattatggtgaattttgaaaaaggaatgttaaagttga 25526586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 212 - 451
Target Start/End: Complemental strand, 36448891 - 36448650
Alignment:
Q  212 gaagggacttattccgaagggacagaaaaaagagggagaagaaaagaatagctcgtcaacacaagctaaatagggagaagagagaaaagttctttgacaa 311  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  36448891 gaagggacttattccgaagggacagaaaaaagagggagaagaaaagaatagctcgtcaacacaagctaaagagggagaagagagaaaagttctttgacaa 36448792  T
Q  312 ctcaagataacttttggtctgtgaaattgtgagggatgagggctctatttataggtgaggaggttgatg-aagatggaaaattggtttaatggaaatgat 410  Q
    ||||||| |||||||||| |||||||||||| || |||||||||||||||||||||||||||||||||| || ||||||||||||||||||| |||||||    
T  36448791 ctcaagagaacttttggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaatggaaaattggtttaatgaaaatgat 36448692  T
Q  411 gaacaattatggtgaa-tttgaaaaaggaatgttaaagttga 451  Q
    | |||||||||||||| |||||||||| ||||||||||||||    
T  36448691 ggacaattatggtgaattttgaaaaagaaatgttaaagttga 36448650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 208 - 451
Target Start/End: Complemental strand, 40015542 - 40015297
Alignment:
Q  208 ttctgaagggacttattccgaagggacagaaaaaagagggagaagaaaagaatagctcgtcaacacaagctaaatagggagaagagagaaaagttctttg 307  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  40015542 ttctgaagggacttattccgaagggacagaaaaaagagggagaagaaaataatagctcgtcaacacaagctaaatagggagaagagagaaaagttatttg 40015443  T
Q  308 acaactcaagataacttttggtctgtgaaattgtgagggatgagggctctatttataggtgaggaggttgatg-aagatggaaaattggtttaatggaaa 406  Q
    |||||||||||||||||||||| |||||||||||| || |||||||||||||||||||||||||||||||||| || | |||||||| ||||||||||||    
T  40015442 acaactcaagataacttttggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaaaggaaaatttgtttaatggaaa 40015343  T
Q  407 tgatgaacaattatggtgaa-tttgaaaaaggaatgttaaagttga 451  Q
    ||||| |||||||||||||| |||||||||||||||||| ||||||    
T  40015342 tgatggacaattatggtgaattttgaaaaaggaatgttacagttga 40015297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 192 - 451
Target Start/End: Original strand, 24964700 - 24964960
Alignment:
Q  192 taccgaaggaacaaaattctgaagggacttattccgaagggacagaaaaaagagggagaagaaaagaatagctcgtcaacacaagctaaatagggagaag 291  Q
    ||||||||| ||||||||| |||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||    
T  24964700 taccgaagggacaaaattccgaagggactt-ttccgaagggacagaaaaaggagggagaagaaaagaatagctcgtcaacacaagctaaagagggagaag 24964798  T
Q  292 agagaaaagttctttgacaactcaagataacttttggtctgtgaaattgtgagggatgagggctctatttataggtgaggaggttgatg-aagatggaaa 390  Q
    ||||||||||||||||||||||||||| |||||||||| |||| ||||||| || |||||||||||||||||||||||||||||||||| || | |||||    
T  24964799 agagaaaagttctttgacaactcaagagaacttttggtgtgtgtaattgtgtggtatgagggctctatttataggtgaggaggttgatgaaaaaaggaaa 24964898  T
Q  391 attggtttaatggaaatgatgaacaattatggtgaa-tttgaaaaaggaatgttaaagttga 451  Q
    | ||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||    
T  24964899 aatggtttaatggaaatgatggacaattatggtgaattttgaaaaaggaatgttaaagttga 24964960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 192 - 451
Target Start/End: Original strand, 24956240 - 24956499
Alignment:
Q  192 taccgaaggaacaaaattctgaagggacttattccgaagggacagaaaaaagagggagaagaaaagaatagctcgtcaacacaagctaaatagggagaag 291  Q
    ||||||||| ||||||||| |||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||    
T  24956240 taccgaagggacaaaattccgaagggactt-ttccgaagggacagaaaaaggagggagaagaaaagaatagctcgtcaacacaagctaaagagggagaag 24956338  T
Q  292 agagaaaagttctttgacaactcaagataacttttggtctgtgaaattgtgagggatgagggctctatttataggtgaggaggttgatgaagatggaaaa 391  Q
    ||||||||||||||||||||||||||| |||||||||| |||| ||||||| || |||||||||||||||||||||||||||||||||||| |  | |||    
T  24956339 agagaaaagttctttgacaactcaagagaacttttggtgtgtgtaattgtgtggtatgagggctctatttataggtgaggaggttgatgaaaaaaggaaa 24956438  T
Q  392 ttggtttaatggaaatgatgaacaattatggtgaa-tttgaaaaaggaatgttaaagttga 451  Q
     ||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||    
T  24956439 atggtttaatggaaatgatggacaattatggtgaattttgaaaaaggaatgttaaagttga 24956499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 182; E-Value: 3e-98
Query Start/End: Original strand, 212 - 451
Target Start/End: Complemental strand, 37049004 - 37048763
Alignment:
Q  212 gaagggacttattccgaagggacagaaaaaagagggagaagaaaagaatagctcgtcaacacaagctaaatagggagaagagagaaaagttctttgacaa 311  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||    
T  37049004 gaagggacttattccgaagggacagaaaaaagggggagaagaaaagaatagctcgttaacacaagctaaagagggagaagagagaaaagttctttgacaa 37048905  T
Q  312 ctcaagataacttttggtctgtgaaattgtgagggatgagggctctatttataggtgaggaggttgatgaag-atggaaaattggtttaatggaaatgat 410  Q
    ||||||| |||||||||| |||||||||||| || ||||| |||||||||||||||||| |||||||||||| | |||||||||||||||||||||||||    
T  37048904 ctcaagagaacttttggtgtgtgaaattgtgtggaatgagagctctatttataggtgagaaggttgatgaagaaaggaaaattggtttaatggaaatgat 37048805  T
Q  411 gaacaattatggtgaa-tttgaaaaaggaatgttaaagttga 451  Q
    | |||||||||||||| |||||||||||||||||||||||||    
T  37048804 ggacaattatggtgaattttgaaaaaggaatgttaaagttga 37048763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 180; E-Value: 5e-97
Query Start/End: Original strand, 222 - 451
Target Start/End: Complemental strand, 30249951 - 30249720
Alignment:
Q  222 attccgaagggacagaaaaaagagggagaagaaaagaatagctcgtcaacacaagctaaatagggagaagagagaaaagttctttgacaactcaagataa 321  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||    
T  30249951 attccgaaggggcagaaaaaagagggagaagaaaagaatagctcgtcaacacaagctaagtagggagaagagagaaaagttctttgacaactcaagagaa 30249852  T
Q  322 cttttggtctgtgaaattgtgagggatgagggctctatttataggtgaggaggttgatg-aagatggaaaattggtttaatggaaatgatgaacaattat 420  Q
    |||||||| |||||||||||| || || ||||||||||||||||||||||||||||||| || ||| |||||||||||||||||||||||||||||||||    
T  30249851 cttttggtgtgtgaaattgtgtggaataagggctctatttataggtgaggaggttgatgaaaaatgaaaaattggtttaatggaaatgatgaacaattat 30249752  T
Q  421 ggtgaa-tttgaaaaaggaatgttaaagttga 451  Q
    |||||| |||||||||||||||||||||||||    
T  30249751 ggtgaattttgaaaaaggaatgttaaagttga 30249720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 179; E-Value: 2e-96
Query Start/End: Original strand, 212 - 451
Target Start/End: Original strand, 43597473 - 43597715
Alignment:
Q  212 gaagggacttattccgaagggacagaaaaaagagggagaagaaaagaatagctcgtcaacacaagctaaatagggagaagagagaaaagttctttgacaa 311  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  43597473 gaagggacttattccgaagggacagaaaaaaaagggagaagaaaagaatagctcgttaacacaagctaaatagggagaagagagaaaagttctttgacaa 43597572  T
Q  312 ctcaagataac-ttttggtctgtgaaattgtgagggatgagggctctatttataggtgaggaggttgatg-aagatggaaaattggtttaatggaaatga 409  Q
    ||||||| ||| ||||||| |||||||||||| || |||||||||||||||||||||||||||||||||| || | |||||| |||||||||||||||||    
T  43597573 ctcaagagaactttttggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaaaggaaaaatggtttaatggaaatga 43597672  T
Q  410 tgaacaattatggtgaa-tttgaaaaaggaatgttaaagttga 451  Q
    || |||||||||||||| |||||||||||||||||||||||||    
T  43597673 tggacaattatggtgaattttgaaaaaggaatgttaaagttga 43597715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 179; E-Value: 2e-96
Query Start/End: Original strand, 212 - 451
Target Start/End: Original strand, 43630267 - 43630509
Alignment:
Q  212 gaagggacttattccgaagggacagaaaaaagagggagaagaaaagaatagctcgtcaacacaagctaaatagggagaagagagaaaagttctttgacaa 311  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  43630267 gaagggacttattccgaagggacagaaaaaaaagggagaagaaaagaatagctcgttaacacaagctaaatagggagaagagagaaaagttctttgacaa 43630366  T
Q  312 ctcaagataac-ttttggtctgtgaaattgtgagggatgagggctctatttataggtgaggaggttgatg-aagatggaaaattggtttaatggaaatga 409  Q
    ||||||| ||| ||||||| |||||||||||| || |||||||||||||||||||||||||||||||||| || | |||||| |||||||||||||||||    
T  43630367 ctcaagagaactttttggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaaaggaaaaatggtttaatggaaatga 43630466  T
Q  410 tgaacaattatggtgaa-tttgaaaaaggaatgttaaagttga 451  Q
    || |||||||||||||| |||||||||||||||||||||||||    
T  43630467 tggacaattatggtgaattttgaaaaaggaatgttaaagttga 43630509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 212 - 451
Target Start/End: Original strand, 20099069 - 20099309
Alignment:
Q  212 gaagggacttattccgaagggacagaaaaaagagggagaagaaaagaatagctcgtcaacacaagctaaatagggagaagagagaaaagttctttgacaa 311  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||    
T  20099069 gaagggacttattccgaagggacagaaaaaagagggagaagaaaagaatagctcgtcaacacaagctaag-agggagaagagagaaaagttctttgacaa 20099167  T
Q  312 ctcaagataacttttggtctgtgaaattgtgagggatgagggctctatttataggtgaggaggttgatg-aagatggaaaattggtttaatggaaatgat 410  Q
    ||||| | ||||||||||  ||||||||||| || |||||||||||||||||||||||||||||||||| || ||||||||||| ||||||| |||||||    
T  20099168 ctcaatagaacttttggtgcgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaatggaaaattgatttaatgaaaatgat 20099267  T
Q  411 gaacaattatggtgaa-tttgaaaaaggaatgttaaagttga 451  Q
    | |||||||||||||| |||||||||||||||||||||||||    
T  20099268 ggacaattatggtgaattttgaaaaaggaatgttaaagttga 20099309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 212 - 451
Target Start/End: Original strand, 23377721 - 23377961
Alignment:
Q  212 gaagggacttattccgaagggacagaaaaaagagggagaagaaaagaatagctcgtcaacacaagctaaatagggagaagagagaaaagttctttgacaa 311  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||  |||||||||||||||||||||||||||||    
T  23377721 gaagggacttattccgaagggacagaaaaaagagggagaagaaaagaatagctcgtcaacacaaactaag-agggagaagagagaaaagttctttgacaa 23377819  T
Q  312 ctcaagataacttttggtctgtgaaattgtgagggatgagggctctatttataggtgaggaggttgatg-aagatggaaaattggtttaatggaaatgat 410  Q
    ||||| | |||||||||| | |||||||||| || |||||||||||||||||||||||||||||||||| || ||||||||||||||||||| |||||||    
T  23377820 ctcaatagaacttttggtgtctgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaatggaaaattggtttaatgaaaatgat 23377919  T
Q  411 gaacaattatggtgaa-tttgaaaaaggaatgttaaagttga 451  Q
    | |||||||||||||| |||||||||||||||||||||||||    
T  23377920 ggacaattatggtgaattttgaaaaaggaatgttaaagttga 23377961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 172; E-Value: 3e-92
Query Start/End: Original strand, 193 - 451
Target Start/End: Original strand, 20092171 - 20092432
Alignment:
Q  193 accgaaggaacaaaatt--ctgaagggacttattccgaagggacagaaaaaagagggagaagaaaagaatagctcgtcaacacaagctaaatagggagaa 290  Q
    ||||||||||||||| |  | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||    
T  20092171 accgaaggaacaaaaattaccgaagggacttattccgaagggacagaaaaaagagggagaagaaaagaatagctcgtcaacacaagctaag-agggagaa 20092269  T
Q  291 gagagaaaagttctttgacaactcaagataacttttggtctgtgaaattgtgagggatgagggctctatttataggtgaggaggttgatg-aagatggaa 389  Q
    |||||||||||||||||||||||||| | ||||||||||  ||||||||||| || |||||||||||||||||||||||||||||||||| || ||||||    
T  20092270 gagagaaaagttctttgacaactcaatagaacttttggtgcgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgtaaaatggaa 20092369  T
Q  390 aattggtttaatggaaatgatgaacaattatggtgaa-tttgaaaaaggaatgttaaagttga 451  Q
    ||||||||||||| |||||||| ||||||| | |||| |||||||||||||||||||||||||    
T  20092370 aattggtttaatgaaaatgatggacaattacgatgaattttgaaaaaggaatgttaaagttga 20092432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 172; E-Value: 3e-92
Query Start/End: Original strand, 192 - 451
Target Start/End: Original strand, 23349480 - 23349743
Alignment:
Q  192 taccgaaggaacaaaattctgaagggacttattccgaagggacagaaaaaagagggagaagaaaagaatagctcgtcaacacaagct-aaatagggagaa 290  Q
    ||||||||| ||||||||  ||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||| ||||||||||||    
T  23349480 taccgaagggacaaaatttcgaagggacttattccgaagggacagaaaaaagagggagaggaaaagaatagctcgttaacacaagctaaaatagggagaa 23349579  T
Q  291 gagagaaaagttctttgacaactcaagataac-ttttggtctgtgaaattgtgagggatgagggctctatttataggtgaggaggttgatg-aagatgga 388  Q
    ||||||||| |||||||||||||||||| ||| ||||||| |||||||||||| || |||| ||||||||||||||||||||||||||||| || | |||    
T  23349580 gagagaaaaattctttgacaactcaagagaactttttggtgtgtgaaattgtgtggaatgatggctctatttataggtgaggaggttgatgaaaaaagga 23349679  T
Q  389 aaattggtttaatggaaatgatgaacaattatggtgaa-tttgaaaaaggaatgttaaagttga 451  Q
    ||| ||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||    
T  23349680 aaagtggtttaatggaaatgatggacaattatggtgaattttgaaaaaggaatgttaaagttga 23349743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 172; E-Value: 3e-92
Query Start/End: Original strand, 226 - 451
Target Start/End: Original strand, 25041702 - 25041929
Alignment:
Q  226 cgaagggacagaaaaaagagggagaagaaaagaatagctcgtcaacacaagctaaatagggagaagagagaaaagttctttgacaactcaagataacttt 325  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  25041702 cgaagggacagaaaaaagagggagaagaaaagaatagcttgtcaacacaagctaaatagggagaagagagaaaagttctttgacaactcaagagaacttt 25041801  T
Q  326 tggtctgtgaaattgtgagggatgagggctctatttataggtgaggaggttgatg-aagatggaaaattggtttaatggaaatgatgaacaattatggtg 424  Q
    |||| |||||||||||| || ||||  |||||||||||||||||||||||||||| || | |||||||||||||||||||||||||| ||||||||||||    
T  25041802 tggtgtgtgaaattgtgtggaatgatagctctatttataggtgaggaggttgatgaaaaaaggaaaattggtttaatggaaatgatggacaattatggtg 25041901  T
Q  425 aa-tttgaaaaaggaatgttaaagttga 451  Q
    || |||||||||||||||||||||||||    
T  25041902 aattttgaaaaaggaatgttaaagttga 25041929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 172; E-Value: 3e-92
Query Start/End: Original strand, 222 - 451
Target Start/End: Original strand, 26186079 - 26186310
Alignment:
Q  222 attccgaagggacagaaaaaagagggagaagaaaagaatagctcgtcaacacaagctaaatagggagaagagagaaaagttctttgacaactcaagataa 321  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||| ||    
T  26186079 attctgaagggacagaaaaaagagggagaagaaaagaatagctcgtcaacacaagctaaaaagggagaagagagaaaaattctttgacaactcaagagaa 26186178  T
Q  322 cttttggtctgtgaaattgtgagggatgagggctctatttataggtgaggaggttgatg-aagatggaaaattggtttaatggaaatgatgaacaattat 420  Q
    |||||||| |||||||||||| || ||||||| |||||||||||||||||||||||||| || |||||||||||||||||||||||||||| ||| ||||    
T  26186179 cttttggtgtgtgaaattgtgtggaatgagggttctatttataggtgaggaggttgatgaaaaatggaaaattggtttaatggaaatgatggacagttat 26186278  T
Q  421 ggtgaa-tttgaaaaaggaatgttaaagttga 451  Q
    |||||| |||||||||||||||||||||||||    
T  26186279 ggtgaattttgaaaaaggaatgttaaagttga 26186310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 225 - 451
Target Start/End: Original strand, 15956431 - 15956658
Alignment:
Q  225 ccgaagggacagaaaaaagagggagaagaaaagaatagctcgtcaacacaagctaaatagggagaagagagaaaagttctttgacaactcaagataactt 324  Q
    |||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||| |||||    
T  15956431 ccgaagggacagaaaa-agagggagaagaaaagaatagctcgttaacacaagctaaatagggagaagagataaaagttctttgacaactcaagagaactt 15956529  T
Q  325 ttggtctgtgaaattgtgagggatgagggctctatttataggtgaggaggttgatg-aagatggaaaattggtttaatggaaatgatgaacaattatggt 423  Q
    ||||| |||||||||||| || |||| ||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||| |||||||||||    
T  15956530 ttggtgtgtgaaattgtgtggaatgaaggctctatttataggtgaggaggttgatgaaaaatggaaaattggtttaatggaaatgatggacaattatggt 15956629  T
Q  424 gaa-tttgaaaaaggaatgttaaagttga 451  Q
    ||| |||||||||||||||||||||||||    
T  15956630 gaattttgaaaaaggaatgttaaagttga 15956658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 160; E-Value: 4e-85
Query Start/End: Original strand, 212 - 451
Target Start/End: Original strand, 1727585 - 1727828
Alignment:
Q  212 gaagggacttattccgaagggacagaaaaaaga-gggagaagaaaagaatagctcgtcaacacaagctaaatagggagaagagagaaaagttctttgaca 310  Q
    |||||||||||||| |||||||||||||||| | ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  1727585 gaagggacttattctgaagggacagaaaaaaaaagggagaagaaaagaatagctcgttaacacaagctaaatagggagaagagagaaaagttctttgaca 1727684  T
Q  311 actcaagataactttt-ggtctgtgaaattgtgagggatgagggctctatttataggtgaggaggttgatg-aagatggaaaattggtttaatggaaatg 408  Q
    |||||||| ||||||| ||| ||| |||||||| || |||||||||||||||||||||||||||||||||| || | ||||||  |||||||||||||||    
T  1727685 actcaagagaacttttcggtgtgtcaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaaaggaaaaaaggtttaatggaaatg 1727784  T
Q  409 atgaacaattatggtgaa-tttgaaaaaggaatgttaaagttga 451  Q
    ||| |||||||||||||| |||||||||||||||||||||||||    
T  1727785 atggacaattatggtgaattttgaaaaaggaatgttaaagttga 1727828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 193 - 399
Target Start/End: Complemental strand, 10058439 - 10058233
Alignment:
Q  193 accgaaggaacaaaatt-ctgaagggacttattccgaagggacagaaaaaagagggagaagaaaagaatagctcgtcaacacaagctaaat-agggagaa 290  Q
    |||||||| |||||||| | |||||||||| ||||||||||||||||||  ||||  |||||||||||||||||||||||||||||||||| ||||||||    
T  10058439 accgaagggacaaaattaccgaagggactt-ttccgaagggacagaaaa--gaggaggaagaaaagaatagctcgtcaacacaagctaaatgagggagaa 10058343  T
Q  291 gagagaaaagttctttgacaactcaagataactttt-ggtctgtgaaattgtgagggatgagggctctatttataggtgaggaggttgatgaagatggaa 389  Q
    |||||||||||||||||||||||||| | ||||||| ||| |||||||||||| || |||||||||||||||||||||||||||||||||||| || |||    
T  10058342 gagagaaaagttctttgacaactcaatagaactttttggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaatagaa 10058243  T
Q  390 aattggttta 399  Q
    || |||||||    
T  10058242 aagtggttta 10058233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 222 - 404
Target Start/End: Original strand, 38227374 - 38227555
Alignment:
Q  222 attccgaagggacagaaaaaagagggagaagaaaagaatagctcgtcaacacaagctaaatagggagaagagagaaaagttctttgacaactcaagataa 321  Q
    ||||||||||| | ||||||   ||| ||| |||||||||||||| ||||||||||||  | ||||||| | |||||||||||||||||| |||||||||    
T  38227374 attccgaagggtctgaaaaagaggggggaaaaaaagaatagctcgccaacacaagctaggtggggagaaaaaagaaaagttctttgacaagtcaagataa 38227473  T
Q  322 cttttggtctgtgaaattgtgagggatgagggctctatttata-ggtgaggaggttgatgaagatggaaaattggtttaatgga 404  Q
    |||||||| |||  ||  |||||| ||||| ||| |||||||| |||||||||||||||||| |||||||| ||||||||||||    
T  38227474 cttttggtgtgtataa--gtgaggaatgagagctatatttatagggtgaggaggttgatgaaaatggaaaaatggtttaatgga 38227555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 227 - 314
Target Start/End: Complemental strand, 16563847 - 16563759
Alignment:
Q  227 gaagggacagaaaaaagagggagaagaaaagaatagctcgtcaacacaagctaa-atagggagaagagagaaaagttctttgacaactc 314  Q
    |||||||||||| ||||| ||||| ||||||||||| ||||||||||||||||| | ||||||||||||||||||||||||||||||||    
T  16563847 gaagggacagaataaagaaggagaggaaaagaatagttcgtcaacacaagctaatagagggagaagagagaaaagttctttgacaactc 16563759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 224 - 328
Target Start/End: Complemental strand, 18265102 - 18264997
Alignment:
Q  224 tccgaagggacagaaaaaagagggagaagaaaagaatagctcgtcaacacaagctaaa-tagggagaaga-gagaaaagttctttgacaactcaagataa 321  Q
    |||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||  |||||||| | || ||||||| |||||||||| |||| ||    
T  18265102 tccgaagggacagaaaaa-gagggagaggaaaagaatagctcgtcaacacaagctaaaggagggagaacaggaaaaaagttatttgacaacttaagagaa 18265004  T
Q  322 cttttgg 328  Q
    |||||||    
T  18265003 cttttgg 18264997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 246 - 329
Target Start/End: Complemental strand, 1285832 - 1285748
Alignment:
Q  246 ggagaagaaaagaatagctcgtcaacacaagctaaat-agggagaagagagaaaagttctttgacaactcaagataacttttggt 329  Q
    |||||||||||||||||||||||||| |||| ||||  |||||||||||| ||||||| ||||||||||||| | ||||||||||    
T  1285832 ggagaagaaaagaatagctcgtcaacgcaagttaaaggagggagaagagataaaagttttttgacaactcaatagaacttttggt 1285748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 238 - 329
Target Start/End: Complemental strand, 16747813 - 16747721
Alignment:
Q  238 aaaaagagggagaagaaaagaatagctcgtcaacacaagctaaat-agggagaagagagaaaagttctttgacaactcaagataacttttggt 329  Q
    ||||| |||||||||||| |||||||||||||||||||| ||||| ||  ||| ||||||||| || |||||||| |||||| ||||||||||    
T  16747813 aaaaaaagggagaagaaatgaatagctcgtcaacacaaggtaaatgagaaagaggagagaaaaattatttgacaattcaagagaacttttggt 16747721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 252 - 403
Target Start/End: Complemental strand, 13359003 - 13358852
Alignment:
Q  252 gaaaagaatagctcgtcaacacaagctaaa-tagggagaagagagaaaagttctttgacaactcaagataacttttggtctgtgaaattgtgagggatga 350  Q
    ||||||||||||||||||||||||||||||  ||  |||||||||| ||  |||||||||||||||||    ||||||| |||| ||  |||||| ||||    
T  13359003 gaaaagaatagctcgtcaacacaagctaaaggagaaagaagagagagaaactctttgacaactcaaga-ggtttttggtgtgtgtaaaagtgaggaatga 13358905  T
Q  351 gggctctatttataggtgaggaggttgatgaagatggaaaattggtttaatgg 403  Q
      ||| ||||| ||| ||||| | |||||||| |||||||| || ||||||||    
T  13358904 aagctatatttgtagttgaggggattgatgaaaatggaaaactgatttaatgg 13358852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 23 - 56
Target Start/End: Original strand, 1727398 - 1727431
Alignment:
Q  23 cacacacatttctcatttatatttacattggacc 56  Q
    ||||||| ||||||||||||||||||||||||||    
T  1727398 cacacacttttctcatttatatttacattggacc 1727431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 23 - 56
Target Start/End: Original strand, 15956260 - 15956293
Alignment:
Q  23 cacacacatttctcatttatatttacattggacc 56  Q
    ||||||| ||||||||||||||||||||||||||    
T  15956260 cacacacttttctcatttatatttacattggacc 15956293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 23 - 56
Target Start/End: Original strand, 20098915 - 20098948
Alignment:
Q  23 cacacacatttctcatttatatttacattggacc 56  Q
    ||||||| ||||||||||||||||||||||||||    
T  20098915 cacacacttttctcatttatatttacattggacc 20098948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 23 - 56
Target Start/End: Original strand, 20639094 - 20639127
Alignment:
Q  23 cacacacatttctcatttatatttacattggacc 56  Q
    ||||||| ||||||||||||||||||||||||||    
T  20639094 cacacacttttctcatttatatttacattggacc 20639127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 23 - 56
Target Start/End: Original strand, 23349310 - 23349343
Alignment:
Q  23 cacacacatttctcatttatatttacattggacc 56  Q
    ||||||| ||||||||||||||||||||||||||    
T  23349310 cacacacttttctcatttatatttacattggacc 23349343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 23 - 56
Target Start/End: Original strand, 23377549 - 23377582
Alignment:
Q  23 cacacacatttctcatttatatttacattggacc 56  Q
    ||||||| ||||||||||||||||||||||||||    
T  23377549 cacacacttttctcatttatatttacattggacc 23377582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 23 - 56
Target Start/End: Original strand, 24956071 - 24956104
Alignment:
Q  23 cacacacatttctcatttatatttacattggacc 56  Q
    ||||||| ||||||||||||||||||||||||||    
T  24956071 cacacacttttctcatttatatttacattggacc 24956104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 23 - 56
Target Start/End: Original strand, 24964531 - 24964564
Alignment:
Q  23 cacacacatttctcatttatatttacattggacc 56  Q
    ||||||| ||||||||||||||||||||||||||    
T  24964531 cacacacttttctcatttatatttacattggacc 24964564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 23 - 56
Target Start/End: Complemental strand, 25527012 - 25526979
Alignment:
Q  23 cacacacatttctcatttatatttacattggacc 56  Q
    ||||||| ||||||||||||||||||||||||||    
T  25527012 cacacacttttctcatttatatttacattggacc 25526979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 23 - 56
Target Start/End: Complemental strand, 25533696 - 25533663
Alignment:
Q  23 cacacacatttctcatttatatttacattggacc 56  Q
    ||||||| ||||||||||||||||||||||||||    
T  25533696 cacacacttttctcatttatatttacattggacc 25533663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 23 - 56
Target Start/End: Complemental strand, 36449064 - 36449031
Alignment:
Q  23 cacacacatttctcatttatatttacattggacc 56  Q
    ||||||| ||||||||||||||||||||||||||    
T  36449064 cacacacttttctcatttatatttacattggacc 36449031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 23 - 56
Target Start/End: Complemental strand, 36455448 - 36455415
Alignment:
Q  23 cacacacatttctcatttatatttacattggacc 56  Q
    ||||||| ||||||||||||||||||||||||||    
T  36455448 cacacacttttctcatttatatttacattggacc 36455415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 23 - 56
Target Start/End: Original strand, 43597287 - 43597320
Alignment:
Q  23 cacacacatttctcatttatatttacattggacc 56  Q
    ||||||| ||||||||||||||||||||||||||    
T  43597287 cacacacttttctcatttatatttacattggacc 43597320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 23 - 56
Target Start/End: Original strand, 43630081 - 43630114
Alignment:
Q  23 cacacacatttctcatttatatttacattggacc 56  Q
    ||||||| ||||||||||||||||||||||||||    
T  43630081 cacacacttttctcatttatatttacattggacc 43630114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 222 - 298
Target Start/End: Original strand, 4872451 - 4872527
Alignment:
Q  222 attccgaagggacagaaaaaagagggagaagaaaagaatagctcgtcaacacaagctaaatagggagaagagagaaa 298  Q
    ||||||||||||||||||||||  |  ||||| |||||   ||||||||||||||  ||  ||||||||||||||||    
T  4872451 attccgaagggacagaaaaaaggagatgaagagaagaaagactcgtcaacacaagtcaagaagggagaagagagaaa 4872527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 198; Significance: 1e-108; HSPs: 38)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 192 - 451
Target Start/End: Original strand, 42565338 - 42565599
Alignment:
Q  192 taccgaaggaacaaaattctgaagggacttattccgaagggacagaaaaaagagggagaagaaaagaatagctcgtcaacacaagctaaatagggagaag 291  Q
    ||||||||| ||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||    
T  42565338 taccgaagggacaaaattccgaagggacttattccgaagggacagaaaaaggagggagaagaaaagaatagctcgtcaacacaagctaaagagggagaag 42565437  T
Q  292 agagaaaagttctttgacaactcaagataacttttggtctgtgaaattgtgagggatgagggctctatttataggtgaggaggttgatg-aagatggaaa 390  Q
    ||||||||||||||||||||||||||| |||||||||| |||||||||||| || |||||||||||||||||||||||||||||||||| || | |||||    
T  42565438 agagaaaagttctttgacaactcaagagaacttttggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaaaggaaa 42565537  T
Q  391 attggtttaatggaaatgatgaacaattatggtgaa-tttgaaaaaggaatgttaaagttga 451  Q
    | ||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||    
T  42565538 aatggtttaatggaaatgatggacaattatggtgaattttgaaaaaggaatgttaaagttga 42565599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 192 - 451
Target Start/End: Original strand, 42573962 - 42574223
Alignment:
Q  192 taccgaaggaacaaaattctgaagggacttattccgaagggacagaaaaaagagggagaagaaaagaatagctcgtcaacacaagctaaatagggagaag 291  Q
    ||||||||| ||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||    
T  42573962 taccgaagggacaaaattccgaagggacttattccgaagggacagaaaaaggagggagaagaaaagaatagctcgtcaacacaagctaaagagggagaag 42574061  T
Q  292 agagaaaagttctttgacaactcaagataacttttggtctgtgaaattgtgagggatgagggctctatttataggtgaggaggttgatg-aagatggaaa 390  Q
    ||||||||||||||||||||||||||| |||||||||| |||||||||||| || |||||||||||||||||||||||||||||||||| || | |||||    
T  42574062 agagaaaagttctttgacaactcaagagaacttttggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaaaggaaa 42574161  T
Q  391 attggtttaatggaaatgatgaacaattatggtgaa-tttgaaaaaggaatgttaaagttga 451  Q
    | ||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||    
T  42574162 aatggtttaatggaaatgatggacaattatggtgaattttgaaaaaggaatgttaaagttga 42574223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 192 - 451
Target Start/End: Original strand, 15952462 - 15952723
Alignment:
Q  192 taccgaaggaacaaaattctgaagggacttattccgaagggacagaaaaaagagggagaagaaaagaatagctcgtcaacacaagctaaatagggagaag 291  Q
    ||||||||| ||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||    
T  15952462 taccgaagggacaaaattccgaagggacttattccgaagggacagaaaaaggagggagaagaaaagaatagctcgtcaacacaagctaaagagggagaag 15952561  T
Q  292 agagaaaagttctttgacaactcaagataacttttggtctgtgaaattgtgagggatgagggctctatttataggtgaggaggttgatg-aagatggaaa 390  Q
    ||||||||||||||||||||||||||| |||||||||| |||| ||||||| || |||||||||||||||||||||||||||||||||| || | |||||    
T  15952562 agagaaaagttctttgacaactcaagagaacttttggtgtgtgtaattgtgtggtatgagggctctatttataggtgaggaggttgatgaaaaaaggaaa 15952661  T
Q  391 attggtttaatggaaatgatgaacaattatggtgaa-tttgaaaaaggaatgttaaagttga 451  Q
    | ||||||||||||||||||| |||||||||||||| |||| ||||||||||||||||||||    
T  15952662 aatggtttaatggaaatgatggacaattatggtgaattttggaaaaggaatgttaaagttga 15952723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 212 - 451
Target Start/End: Original strand, 17708 - 17948
Alignment:
Q  212 gaagggacttattccgaagggacagaaaaaagagggagaagaaaagaatagctcgtcaacacaagctaaatagggagaagagagaaaagttctttgacaa 311  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||    
T  17708 gaagggacttattccgaagggacagaaaaaagagggagaagaaaagaatagctcgtcaacacaagctaag-agggagaagagagaaaagttctttgacaa 17806  T
Q  312 ctcaagataacttttggtctgtgaaattgtgagggatgagggctctatttataggtgaggaggttgatg-aagatggaaaattggtttaatggaaatgat 410  Q
    ||||| | |||||||||| |||||||||||| || |||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||    
T  17807 ctcaatagaacttttggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaatggaaaattggtttaatggaaatgat 17906  T
Q  411 gaacaattatggtgaa-tttgaaaaaggaatgttaaagttga 451  Q
    | |||||||||||||| |||||||||||||||||||||||||    
T  17907 ggacaattatggtgaattttgaaaaaggaatgttaaagttga 17948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 192 - 451
Target Start/End: Complemental strand, 35139269 - 35139008
Alignment:
Q  192 taccgaaggaacaaaattctgaagggacttattccgaagggacagaaaaaagagggagaagaaaagaatagctcgtcaacacaagctaaatagggagaag 291  Q
    ||||||||| ||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||| |||||||||    
T  35139269 taccgaagggacaaaattccgaagggacttattccgaagggacagaaaaaggagggagaagaaaagaatagctcgtcaacacaagttaaagagggagaag 35139170  T
Q  292 agagaaaagttctttgacaactcaagataacttttggtctgtgaaattgtgagggatgagggctctatttataggtgaggaggttgatg-aagatggaaa 390  Q
    ||||||||||||||||||||||||||| |||||||||| |||| ||||||| || |||||||||||||||||||||||||||||||||| || | |||||    
T  35139169 agagaaaagttctttgacaactcaagagaacttttggtgtgtgtaattgtgtggtatgagggctctatttataggtgaggaggttgatgaaaaaaggaaa 35139070  T
Q  391 attggtttaatggaaatgatgaacaattatggtgaa-tttgaaaaaggaatgttaaagttga 451  Q
    | ||||||||||||||||||| |||||||||||||| |||| ||||||||||||||||||||    
T  35139069 aatggtttaatggaaatgatggacaattatggtgaattttggaaaaggaatgttaaagttga 35139008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 192 - 451
Target Start/End: Complemental strand, 35147605 - 35147344
Alignment:
Q  192 taccgaaggaacaaaattctgaagggacttattccgaagggacagaaaaaagagggagaagaaaagaatagctcgtcaacacaagctaaatagggagaag 291  Q
    ||||||||| ||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||| |||||||||    
T  35147605 taccgaagggacaaaattccgaagggacttattccgaagggacagaaaaaggagggagaagaaaagaatagctcgtcaacacaagttaaagagggagaag 35147506  T
Q  292 agagaaaagttctttgacaactcaagataacttttggtctgtgaaattgtgagggatgagggctctatttataggtgaggaggttgatg-aagatggaaa 390  Q
    ||||||||||||||||||||||||||| |||||||||| |||| ||||||| || |||||||||||||||||||||||||||||||||| || | |||||    
T  35147505 agagaaaagttctttgacaactcaagagaacttttggtgtgtgtaattgtgtggtatgagggctctatttataggtgaggaggttgatgaaaaaaggaaa 35147406  T
Q  391 attggtttaatggaaatgatgaacaattatggtgaa-tttgaaaaaggaatgttaaagttga 451  Q
    | ||||||||||||||||||| |||||||||||||| |||| ||||||||||||||||||||    
T  35147405 aatggtttaatggaaatgatggacaattatggtgaattttggaaaaggaatgttaaagttga 35147344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 182; E-Value: 3e-98
Query Start/End: Original strand, 212 - 451
Target Start/End: Original strand, 5870531 - 5870771
Alignment:
Q  212 gaagggacttattccgaagggacagaaaaaagagggagaagaaaagaatagctcgtcaacacaagctaaatagggagaagagagaaaagttctttgacaa 311  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  5870531 gaagggacttattccgaagggacagaaaa-agagggagaagaaaagaatagctcgtcaacacaagctaaagagggagaagagagaaaagttctttgacaa 5870629  T
Q  312 ctcaagataacttttggtctgtgaaattgtgagggatgagggctctatttataggtgaggaggttgatgaag-atggaaaattggtttaatggaaatgat 410  Q
    ||||||| |||||||||| |||||||||||| || ||||| ||||||||||||||||| ||||||||||||| | |||||||||||||||||||||||||    
T  5870630 ctcaagagaacttttggtgtgtgaaattgtgtggaatgagagctctatttataggtgaagaggttgatgaagaaaggaaaattggtttaatggaaatgat 5870729  T
Q  411 gaacaattatggtgaa-tttgaaaaaggaatgttaaagttga 451  Q
    | |||||||||||||| |||||||||||||||||||||||||    
T  5870730 ggacaattatggtgaattttgaaaaaggaatgttaaagttga 5870771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 182; E-Value: 3e-98
Query Start/End: Original strand, 212 - 451
Target Start/End: Original strand, 5873673 - 5873913
Alignment:
Q  212 gaagggacttattccgaagggacagaaaaaagagggagaagaaaagaatagctcgtcaacacaagctaaatagggagaagagagaaaagttctttgacaa 311  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  5873673 gaagggacttattccgaagggacagaaaa-agagggagaagaaaagaatagctcgtcaacacaagctaaagagggagaagagagaaaagttctttgacaa 5873771  T
Q  312 ctcaagataacttttggtctgtgaaattgtgagggatgagggctctatttataggtgaggaggttgatgaag-atggaaaattggtttaatggaaatgat 410  Q
    ||||||| |||||||||| |||||||||||| || ||||| ||||||||||||||||| ||||||||||||| | |||||||||||||||||||||||||    
T  5873772 ctcaagagaacttttggtgtgtgaaattgtgtggaatgagagctctatttataggtgaagaggttgatgaagaaaggaaaattggtttaatggaaatgat 5873871  T
Q  411 gaacaattatggtgaa-tttgaaaaaggaatgttaaagttga 451  Q
    | |||||||||||||| |||||||||||||||||||||||||    
T  5873872 ggacaattatggtgaattttgaaaaaggaatgttaaagttga 5873913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 178; E-Value: 8e-96
Query Start/End: Original strand, 212 - 451
Target Start/End: Complemental strand, 11874337 - 11874097
Alignment:
Q  212 gaagggacttattccgaagggacagaaaaaagagggagaagaaaagaatagctcgtcaacacaagctaaatagggagaagagagaaaagttctttgacaa 311  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11874337 gaagggacttattccgaagggacagaaaaa-gagggagaagaaaagaatagctcgtcaacacaagctaaatagggagaagagagaaaagttctttgacaa 11874239  T
Q  312 ctcaagataacttttggtctgtgaaattgtgagggatgagggctctatttataggtgaggaggttgatg-aagatggaaaattggtttaatggaaatgat 410  Q
    ||||||| ||||||| || |||||||||||| || |||||||||| ||||||||||||||||||||||| || |  ||||||||||||||||||||||||    
T  11874238 ctcaagagaactttttgtgtgtgaaattgtgtggaatgagggctccatttataggtgaggaggttgatgaaaaaatgaaaattggtttaatggaaatgat 11874139  T
Q  411 gaacaattatggtgaa-tttgaaaaaggaatgttaaagttga 451  Q
    | |||||||||||||| |||||||||||||||||||||||||    
T  11874138 ggacaattatggtgaattttgaaaaaggaatgttaaagttga 11874097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 178; E-Value: 8e-96
Query Start/End: Original strand, 212 - 451
Target Start/End: Original strand, 15943967 - 15944208
Alignment:
Q  212 gaagggacttattccgaagggacagaaaaaagagggagaagaaaagaatagctcgtcaacacaagctaaatagggagaagagagaaaagttctttgacaa 311  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  15943967 gaagggacttattccgaagggacagaaaaaggagggagaagaaaagaatagctcgtcaacacaagctaaagagggagaagagagaaaagttctttgacaa 15944066  T
Q  312 ctcaagataacttttggtctgtgaaattgtgagggatgagggctctatttataggtgaggaggttgatg-aagatggaaaattggtttaatggaaatgat 410  Q
    ||||||| |||||||||| |||| ||||||| || |||||||||||||||||||||||||||||||||| || | |||||| ||||||||||||||||||    
T  15944067 ctcaagagaacttttggtgtgtgcaattgtgtggtatgagggctctatttataggtgaggaggttgatgaaaaaaggaaaaatggtttaatggaaatgat 15944166  T
Q  411 gaacaattatggtgaa-tttgaaaaaggaatgttaaagttga 451  Q
    | |||||||||||||| |||| ||||||||||||||||||||    
T  15944167 ggacaattatggtgaattttggaaaaggaatgttaaagttga 15944208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 176; E-Value: 1e-94
Query Start/End: Original strand, 222 - 451
Target Start/End: Complemental strand, 24690726 - 24690495
Alignment:
Q  222 attccgaagggacagaaaaaagagggagaagaaaagaatagctcgtcaacacaagctaaatagggagaagagagaaaagttctttgacaactcaagataa 321  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||    
T  24690726 attccgaagggacagaaaaaagagggagaagaaaagaaaagctcgtcaacgcaagctaaatagggagaagagagaaaagttctttgacaactcaagagaa 24690627  T
Q  322 cttttggtctgtgaaattgtgagggatgagggctctatttataggtgaggaggttgatg-aagatggaaaattggtttaatggaaatgatgaacaattat 420  Q
    ||||| || |||||||||||| || |||||||||||||||||||||||||||||||||| || | |||||||||||||||||||||||||| ||||||||    
T  24690626 ctttttgtgtgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaaaggaaaattggtttaatggaaatgatggacaattat 24690527  T
Q  421 ggtgaa-tttgaaaaaggaatgttaaagttga 451  Q
    |||||| |||||||||||||||||||||||||    
T  24690526 ggtgaattttgaaaaaggaatgttaaagttga 24690495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 212 - 451
Target Start/End: Original strand, 38083943 - 38084183
Alignment:
Q  212 gaagggacttattccgaagggacagaaaaaagagggagaagaaaagaatagctcgtcaacacaagctaaatagggagaagagagaaaagttctttgacaa 311  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||    
T  38083943 gaagagacttattccgaagggacagaaaaaagagggagaagaaaagaatagctcgtcaacacaagctaaagagggagaagagagaaaagttcttttacaa 38084042  T
Q  312 ctcaagataacttttggtctgtgaaattgtgagggatgagggctctatttataggtgaggaggttgatg-aagatggaaaattggtttaatggaaatgat 410  Q
    ||||||| |||||||||| |||||||||||| || ||||||||||||||||||||||||||| |||||| || | |||||||||||||||||| ||||||    
T  38084043 ctcaagagaacttttggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggagtttgatgaaaaaaggaaaattggtttaatgggaatgat 38084142  T
Q  411 gaacaattatggtgaa-tttgaaaaaggaatgttaaagttga 451  Q
    | | |||||| ||||| |||||||||||||||||||||||||    
T  38084143 ggataattat-gtgaattttgaaaaaggaatgttaaagttga 38084183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 157; E-Value: 3e-83
Query Start/End: Original strand, 222 - 451
Target Start/End: Original strand, 18972532 - 18972761
Alignment:
Q  222 attccgaagggacagaaaaaagagggagaagaaaagaatagctcgtcaacacaagctaaatagggagaagagagaaaagttctttgacaactcaagataa 321  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||| ||    
T  18972532 attccgaagggacagaaaaaagagggagaagaaaagaatagctcatcaacacaaactaaatagggagaagagagaaaagttctttgacaactcaagagaa 18972631  T
Q  322 cttttggtctgtgaaattgtgagggatgagggctctatttataggtgaggaggttgatgaa-gatggaaaattggtttaatggaaatgatgaacaattat 420  Q
    |||||||  ||| |||||||| || |||| |||||||||||||||||||||||||||||||  |   |||||||||||||||||||||||| ||||||||    
T  18972632 cttttgg--tgtcaaattgtgtggaatgaaggctctatttataggtgaggaggttgatgaataaattaaaattggtttaatggaaatgatggacaattat 18972729  T
Q  421 ggtgaa-tttgaaaaaggaatgttaaagttga 451  Q
    |||||| |||||||||||||||||||||||||    
T  18972730 ggtgaattttgaaaaaggaatgttaaagttga 18972761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 157; E-Value: 3e-83
Query Start/End: Original strand, 222 - 451
Target Start/End: Original strand, 41233262 - 41233494
Alignment:
Q  222 attccgaagggacagaaaaaagagggagaagaaaagaatagctcgtcaacacaagctaaatagggagaagagagaaaagttctttgacaactcaagataa 321  Q
    ||||||||||||||||||||| |||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  41233262 attccgaagggacagaaaaaaaagggagaagaaaagaatagctcattaacacaagctaaatagggagaagagagaaaagttctttgacaactcaagagaa 41233361  T
Q  322 c-ttttggtctgtgaaattgtgagggatgagggctctatttataggtgaggaggttgatg-aagatggaaaattggtttaatggaaatgatgaacaatta 419  Q
    | ||||||| |||| ||||||| || |||||||||||||||||||||||||||||||||| || | |||||| ||||||||||||||||||| |||||||    
T  41233362 ctttttggtgtgtgtaattgtgtggtatgagggctctatttataggtgaggaggttgatgaaaaaaggaaaaatggtttaatggaaatgatggacaatta 41233461  T
Q  420 tggtgaa-tttgaaaaaggaatgttaaagttga 451  Q
    ||||||| |||| ||||||||||||||||||||    
T  41233462 tggtgaattttggaaaaggaatgttaaagttga 41233494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 193 - 451
Target Start/End: Original strand, 19883841 - 19884099
Alignment:
Q  193 accgaaggaacaaaattctgaagggacttattccgaagggacagaaaaaagagggagaagaaaagaatagctcgtcaacacaagctaaatagggagaaga 292  Q
    |||||||| ||||||||  ||||| |||| ||| ||||||| |||||||||| ||||| ||||||||||||||||||||||||  |||||||||||||||    
T  19883841 accgaagggacaaaatttcgaaggaactt-ttcggaagggatagaaaaaagacggagaggaaaagaatagctcgtcaacacaaaataaatagggagaaga 19883939  T
Q  293 gagaaaagttctttgacaactcaagataacttttggtctgtgaaattgtgagggatgagggctctatttataggtgaggaggttgatgaagatggaaaat 392  Q
    |||| ||||||||||||||||||| | |||||||||| ||||||||| || || ||||| |||||||||||||||||||||||||||||| |||||||||    
T  19883940 gagagaagttctttgacaactcaaaagaacttttggtgtgtgaaattttgtggaatgagagctctatttataggtgaggaggttgatgaaaatggaaaat 19884039  T
Q  393 tggtttaatggaaatgatgaacaattatggtgaa-tttgaaaaaggaatgttaaagttga 451  Q
    ||||||||||||||||||| |||||||||||||| ||||||||| |||| ||||||||||    
T  19884040 tggtttaatggaaatgatggacaattatggtgaattttgaaaaaagaatattaaagttga 19884099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 212 - 451
Target Start/End: Complemental strand, 18500867 - 18500634
Alignment:
Q  212 gaagggacttattccgaagggacagaaaaaagagggagaagaaaagaatagctcgtcaacacaagctaaatagggagaagagagaaaagttctttgacaa 311  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  18500867 gaagggactt-ttccgaagggacagaaaaaagagggagaagaaaagaatagctcgtcaacacaagctaaagagggagaagagagaaaagttctttgacaa 18500769  T
Q  312 ctcaagataacttttggtctgtgaaattgtgagggatgagggctctatttataggtgaggaggttgatg-aagatggaaaattggtttaatggaaatgat 410  Q
    ||||||| |||||||||| |||||||||||| || ||||||||||      ||||||||||| |||||| || | |||||||||||||||||||||||||    
T  18500768 ctcaagagaacttttggtgtgtgaaattgtgtggaatgagggctc------taggtgaggagtttgatgaaaaaaggaaaattggtttaatggaaatgat 18500675  T
Q  411 gaacaattatggtgaa-tttgaaaaaggaatgttaaagttga 451  Q
    | |||||||| ||||| |||||||||||||||||||||||||    
T  18500674 ggacaattat-gtgaattttgaaaaaggaatgttaaagttga 18500634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 293 - 451
Target Start/End: Complemental strand, 36735885 - 36735725
Alignment:
Q  293 gagaaaagttctttgacaactcaagataacttttggtctgtgaaattgtgagggatgagggctctatttataggtgaggaggttgatg-aagatggaaaa 391  Q
    |||||||||||||||||||||||||| |||||||||| |||||||||||| |  |||||||||||||||||||||||||||||||||| || ||||||||    
T  36735885 gagaaaagttctttgacaactcaagagaacttttggtatgtgaaattgtgtgaaatgagggctctatttataggtgaggaggttgatgaaaaatggaaaa 36735786  T
Q  392 ttggtttaatggaaatgatgaacaattatggtgaa-tttgaaaaaggaatgttaaagttga 451  Q
    |||||||||||||||||||| ||||||||||| || |||||||||||||||||||||||||    
T  36735785 ttggtttaatggaaatgatggacaattatggtaaattttgaaaaaggaatgttaaagttga 36735725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 212 - 318
Target Start/End: Original strand, 40386525 - 40386632
Alignment:
Q  212 gaagggacttattccgaagggacagaaaaaagagggagaagaaaagaatagctcgtcaacacaagctaaat-agggagaagagagaaaagttctttgaca 310  Q
    |||||||||| ||||||||||||| ||||||||||||||||| || ||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  40386525 gaagggactttttccgaagggacataaaaaagagggagaagagaataatagctcgtcaacacaagctaaatgagggagaagagagaaaagttctttgaca 40386624  T
Q  311 actcaaga 318  Q
    ||||||||    
T  40386625 actcaaga 40386632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 227 - 373
Target Start/End: Original strand, 14105085 - 14105231
Alignment:
Q  227 gaagggacagaaaaaagagggagaagaaaagaatagctcgtcaacacaagctaaa-tagggagaagagagaaaagttctttgacaactcaagataacttt 325  Q
    |||||||||||||| ||||||||| ||||||||||||||||||||||||||||||  || ||||||||||||||||| ||||||||||||||| ||||||    
T  14105085 gaagggacagaaaa-agagggagaggaaaagaatagctcgtcaacacaagctaaaggagagagaagagagaaaagttatttgacaactcaagagaacttt 14105183  T
Q  326 tggtctgtgaaattgtgagggatgagg-gctctatttataggtgaggag 373  Q
    |||  || | ||  |||||||| |||| |||||||||||||||||||||    
T  14105184 tggggtgagtaaaagtgaggga-gaggagctctatttataggtgaggag 14105231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 238 - 333
Target Start/End: Original strand, 45031667 - 45031763
Alignment:
Q  238 aaaaagagggagaagaaaagaatagctcgtcaacacaagctaaa-tagggagaagagagaaaagttctttgacaactcaagataacttttggtctgt 333  Q
    ||||||||||| ||||||||||||||||||||||||||| ||||  |||||||||||| ||| ||||||||||||||||||| ||||||| ||||||    
T  45031667 aaaaagagggataagaaaagaatagctcgtcaacacaagttaaaggagggagaagagataaaggttctttgacaactcaagagaactttttgtctgt 45031763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 227 - 329
Target Start/End: Complemental strand, 17254970 - 17254869
Alignment:
Q  227 gaagggacagaaaaaagagggagaagaaaagaatagctcgtcaacacaagctaaat-agggagaagagagaaaagttctttgacaactcaagataacttt 325  Q
    ||||||||||||||| |||||| || |||||||||||||||||||||||| ||||| |||||||||||||||||| |||||| |||||||||| ||||||    
T  17254970 gaagggacagaaaaa-gagggaaaa-aaaagaatagctcgtcaacacaagataaatgagggagaagagagaaaagatctttgtcaactcaagagaacttt 17254873  T
Q  326 tggt 329  Q
    ||||    
T  17254872 tggt 17254869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 224 - 369
Target Start/End: Complemental strand, 44957144 - 44956999
Alignment:
Q  224 tccgaagggacagaaaaaagagggagaagaaaagaatagctcgtcaacacaagctaaat-agggagaagagagaaaagttctttgacaactcaagataac 322  Q
    |||||||||| |||||| | |||| |||||||||||||||||||||| ||||||||||  ||||||||||||||||| |||||| ||||||||||| |||    
T  44957144 tccgaagggatagaaaata-agggggaagaaaagaatagctcgtcaagacaagctaaaggagggagaagagagaaaatttctttaacaactcaagagaac 44957046  T
Q  323 ttttggtctgtgaaattgtgagggatgagggctctatttataggtga 369  Q
    ||||||  || | |   |||||| ||||| | |||||||||||||||    
T  44957045 ttttggggtgagtacaagtgaggaatgagagttctatttataggtga 44956999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 212 - 266
Target Start/End: Complemental strand, 36735939 - 36735885
Alignment:
Q  212 gaagggacttattccgaagggacagaaaaaagagggagaagaaaagaatagctcg 266  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36735939 gaagggacttattccgaagggacagaaaaaagagggagaagaaaagaatagctcg 36735885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 237 - 327
Target Start/End: Complemental strand, 13060064 - 13059975
Alignment:
Q  237 aaaaaagagggagaagaaaa-gaatagctcgtcaacacaagctaaatagggagaagagagaaaagttctttgacaactcaagataacttttg 327  Q
    ||||||||||||||| |||| |||||||||| ||| |  |||||||   |||||||||||||||||||||||| ||||||||| ||||||||    
T  13060064 aaaaaagagggagaaaaaaaagaatagctcgacaataagagctaaaa--ggagaagagagaaaagttctttgaaaactcaagagaacttttg 13059975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 373 - 451
Target Start/End: Original strand, 40386688 - 40386767
Alignment:
Q  373 ggttgatgaagatggaaaattggtttaatggaaatgatgaacaattatggtgaa-tttgaaaaaggaatgttaaagttga 451  Q
    |||||||||| |||  ||||  ||||||||||||||||| |||||||||||||| ||||||||| ||| |||||||||||    
T  40386688 ggttgatgaaaatgataaatcagtttaatggaaatgatggacaattatggtgaattttgaaaaatgaacgttaaagttga 40386767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 23 - 56
Target Start/End: Complemental strand, 11874537 - 11874504
Alignment:
Q  23 cacacacatttctcatttatatttacattggacc 56  Q
    ||||||| ||||||||||||||||||||||||||    
T  11874537 cacacacttttctcatttatatttacattggacc 11874504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 23 - 56
Target Start/End: Original strand, 15943782 - 15943815
Alignment:
Q  23 cacacacatttctcatttatatttacattggacc 56  Q
    ||||||| ||||||||||||||||||||||||||    
T  15943782 cacacacttttctcatttatatttacattggacc 15943815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 23 - 56
Target Start/End: Original strand, 15952293 - 15952326
Alignment:
Q  23 cacacacatttctcatttatatttacattggacc 56  Q
    ||||||| ||||||||||||||||||||||||||    
T  15952293 cacacacttttctcatttatatttacattggacc 15952326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 23 - 56
Target Start/End: Complemental strand, 18501022 - 18500989
Alignment:
Q  23 cacacacatttctcatttatatttacattggacc 56  Q
    ||||||| ||||||||||||||||||||||||||    
T  18501022 cacacacttttctcatttatatttacattggacc 18500989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 23 - 56
Target Start/End: Original strand, 19883695 - 19883728
Alignment:
Q  23 cacacacatttctcatttatatttacattggacc 56  Q
    ||||||| ||||||||||||||||||||||||||    
T  19883695 cacacacttttctcatttatatttacattggacc 19883728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 23 - 56
Target Start/End: Complemental strand, 35139438 - 35139405
Alignment:
Q  23 cacacacatttctcatttatatttacattggacc 56  Q
    ||||||| ||||||||||||||||||||||||||    
T  35139438 cacacacttttctcatttatatttacattggacc 35139405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 23 - 56
Target Start/End: Complemental strand, 35147779 - 35147746
Alignment:
Q  23 cacacacatttctcatttatatttacattggacc 56  Q
    ||||||| ||||||||||||||||||||||||||    
T  35147779 cacacacttttctcatttatatttacattggacc 35147746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 23 - 56
Target Start/End: Complemental strand, 36736112 - 36736079
Alignment:
Q  23 cacacacatttctcatttatatttacattggacc 56  Q
    ||||||| ||||||||||||||||||||||||||    
T  36736112 cacacacttttctcatttatatttacattggacc 36736079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 23 - 56
Target Start/End: Original strand, 38083757 - 38083790
Alignment:
Q  23 cacacacatttctcatttatatttacattggacc 56  Q
    ||||||| ||||||||||||||||||||||||||    
T  38083757 cacacacttttctcatttatatttacattggacc 38083790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 23 - 56
Target Start/End: Original strand, 41233095 - 41233128
Alignment:
Q  23 cacacacatttctcatttatatttacattggacc 56  Q
    ||||||| ||||||||||||||||||||||||||    
T  41233095 cacacacttttctcatttatatttacattggacc 41233128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 23 - 56
Target Start/End: Original strand, 42565169 - 42565202
Alignment:
Q  23 cacacacatttctcatttatatttacattggacc 56  Q
    ||||||| ||||||||||||||||||||||||||    
T  42565169 cacacacttttctcatttatatttacattggacc 42565202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 23 - 56
Target Start/End: Original strand, 42573793 - 42573826
Alignment:
Q  23 cacacacatttctcatttatatttacattggacc 56  Q
    ||||||| ||||||||||||||||||||||||||    
T  42573793 cacacacttttctcatttatatttacattggacc 42573826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 20 - 56
Target Start/End: Complemental strand, 24690913 - 24690877
Alignment:
Q  20 acacacacacatttctcatttatatttacattggacc 56  Q
    |||| ||||| ||||||||||||||||||||||||||    
T  24690913 acacgcacacttttctcatttatatttacattggacc 24690877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 182; Significance: 3e-98; HSPs: 37)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 182; E-Value: 3e-98
Query Start/End: Original strand, 212 - 451
Target Start/End: Complemental strand, 28415772 - 28415532
Alignment:
Q  212 gaagggacttattccgaagggacagaaaaaagagggagaagaaaagaatagctcgtcaacacaagctaaatagggagaagagagaaaagttctttgacaa 311  Q
    |||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  28415772 gaagggactt-ttccgaagggacagaaaaaagagagagaagaaaagaatagctcgtcaacacaagctaaagagggagaagagagaaaagttctttgacaa 28415674  T
Q  312 ctcaagataacttttggtctgtgaaattgtgagggatgagggctctatttataggtgaggaggttgatg-aagatggaaaattggtttaatggaaatgat 410  Q
    ||||||| |||||||| | |||||||||||| || |||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||    
T  28415673 ctcaagagaacttttgatatgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaatggaaaattggtttaatggaaatgat 28415574  T
Q  411 gaacaattatggtgaa-tttgaaaaaggaatgttaaagttga 451  Q
    | |||||||||||||| |||||||||||||||||||||||||    
T  28415573 ggacaattatggtgaattttgaaaaaggaatgttaaagttga 28415532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 179; E-Value: 2e-96
Query Start/End: Original strand, 192 - 451
Target Start/End: Original strand, 18303792 - 18304053
Alignment:
Q  192 taccgaaggaacaaaattctgaagggacttattccgaagggacagaaaaaagagggagaagaaaagaatagctcgtcaacacaagctaaatagggagaag 291  Q
    ||||||||| ||||||||| |||||||||| |||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||    
T  18303792 taccgaagggacaaaattccgaagggactt-ttccgaagggacagaaaaaaaagggagaagaaaagaatagctcgttaacacaagctaaatagggagaag 18303890  T
Q  292 agagaaaagttctttgacaactcaagataac-ttttggtctgtgaaattgtgagggatgagggctctatttataggtgaggaggttgatg-aagatggaa 389  Q
    ||||||||||||||||||||||||||| ||| ||||||| | |||||||||| || |||||||||||||||||||||||||||||||||| || | ||||    
T  18303891 agagaaaagttctttgacaactcaagagaactttttggtgtctgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaaaggaa 18303990  T
Q  390 aattggtttaatggaaatgatgaacaattatggtgaa-tttgaaaaaggaatgttaaagttga 451  Q
    || ||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||    
T  18303991 aaatggtttaatggaaatgatggacaattatggtgaattttgaaaaaggaatgttaaagttga 18304053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 179; E-Value: 2e-96
Query Start/End: Original strand, 195 - 451
Target Start/End: Original strand, 46299328 - 46299585
Alignment:
Q  195 cgaaggaacaaaattctgaagggacttattccgaagggacagaaaaaagagggagaagaaaagaatagctcgtcaacacaagctaaat-agggagaagag 293  Q
    |||||| |||||||||  ||||||||| ||| |||||||| ||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||| |    
T  46299328 cgaagggacaaaattccaaagggactttttc-gaagggacggaaaaaagaaggagaagaaaagaatagctcgtcaacacaagctaaatgagggagaagtg 46299426  T
Q  294 agaaaagttctttgacaactcaagataacttttggtctgtgaaattgtgagggatgagggctctatttataggtgaggaggttgatgaagatggaaaatt 393  Q
    ||||||||||||||||||| ||||| |||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||    
T  46299427 agaaaagttctttgacaacccaagagaacttttggtgtgtgaaattgtgagggatgagagctctatttataggtgaggaggttgatgaaaatggaaaatt 46299526  T
Q  394 ggtttaatggaaatgatgaacaattatggtgaa-tttgaaaaaggaatgttaaagttga 451  Q
    |||||||||||||||||| |||||||||||||| |||||||||| ||||||||||||||    
T  46299527 ggtttaatggaaatgatggacaattatggtgaattttgaaaaagaaatgttaaagttga 46299585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 177; E-Value: 3e-95
Query Start/End: Original strand, 225 - 451
Target Start/End: Original strand, 6851447 - 6851675
Alignment:
Q  225 ccgaagggacagaaaaaagagggagaagaaaagaatagctcgtcaacacaagctaaatagggagaagagagaaaagttctttgacaactcaagataactt 324  Q
    ||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  6851447 ccgaagggacagaaaaaagagggagaaaaaaaaaatagctcgtcaacacaagctaaatagggagaagagagaaaagttctttgacaactcaagagaactt 6851546  T
Q  325 ttggtctgtgaaattgtgagggatgagggctctatttataggtgaggaggttgatg-aagatggaaaattggtttaatggaaatgatgaacaattatggt 423  Q
    ||| | |||||||||||| || |||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||| |||||||||||    
T  6851547 ttgatgtgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaatggaaaattggtttaatggaaatgatggacaattatggt 6851646  T
Q  424 gaa-tttgaaaaaggaatgttaaagttga 451  Q
    ||| |||||||||||||||||||||||||    
T  6851647 gaattttgaaaaaggaatgttaaagttga 6851675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 173; E-Value: 8e-93
Query Start/End: Original strand, 225 - 451
Target Start/End: Original strand, 1858006 - 1858234
Alignment:
Q  225 ccgaagggacagaaaaaagagggagaagaaaagaatagctcgtcaacacaagctaaatagggagaagagagaaaagttctttgacaactcaagataactt 324  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||     
T  1858006 ccgaagggacagaaaaaagagggagaagaaaagaatagctcgtcaacacaagctaaagagggagaagagagaaaagttctttgacaactcaagagaactg 1858105  T
Q  325 ttggtctgtgaaattgtgagggatgagggctctatttataggtgaggaggttgatgaag-atggaaaattggtttaatggaaatgatgaacaattatggt 423  Q
    ||||| |||||||||||| || ||||| |||||||||||||||||| |||||||||||| | |||||||||||||||||||||||||| |||||||||||    
T  1858106 ttggtgtgtgaaattgtgtggaatgagagctctatttataggtgagaaggttgatgaagaaaggaaaattggtttaatggaaatgatggacaattatggt 1858205  T
Q  424 gaa-tttgaaaaaggaatgttaaagttga 451  Q
    ||| |||||||||||||||||||||||||    
T  1858206 gaattttgaaaaaggaatgttaaagttga 1858234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 172; E-Value: 3e-92
Query Start/End: Original strand, 207 - 451
Target Start/End: Complemental strand, 13832139 - 13831893
Alignment:
Q  207 attctgaagggacttattccgaagggacagaaaaaagagggagaagaaaagaatagctcgtcaacacaagctaaatagggagaagagagaaaagttcttt 306  Q
    |||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  13832139 attccgaagggacttattccgaagggacagaaaaaa-agggagaagaaaagaatagctcgttaacacaagctaaatagggagaagagagaaaagttcttt 13832041  T
Q  307 gacaactcaagataac-ttttggtctgtgaaattgtgagggatgagggctctatttataggtgaggaggttgatg-aagatggaaaattggtttaatgga 404  Q
    |||||||||||| ||| ||||||| |||| ||||||| || |||||||||||||||||||||||||||||||||| || | |||||| ||||||||||||    
T  13832040 gacaactcaagagaactttttggtgtgtgtaattgtgtggtatgagggctctatttataggtgaggaggttgatgaaaaaaggaaaaatggtttaatgga 13831941  T
Q  405 aatgatgaacaattatggtgaa-tttgaaaaaggaatgttaaagttga 451  Q
    ||||||| |||||||||||||| |||||||||||||||||||||||||    
T  13831940 aatgatggacaattatggtgaattttgaaaaaggaatgttaaagttga 13831893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 207 - 451
Target Start/End: Complemental strand, 13840169 - 13839923
Alignment:
Q  207 attctgaagggacttattccgaagggacagaaaaaagagggagaagaaaagaatagctcgtcaacacaagctaaatagggagaagagagaaaagttcttt 306  Q
    |||| ||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  13840169 attccgaagggacttattccgaagggacagaaaaaa-aggaagaagaaaagaatagctcgttaacacaagctaaatagggagaagagagaaaagttcttt 13840071  T
Q  307 gacaactcaagataac-ttttggtctgtgaaattgtgagggatgagggctctatttataggtgaggaggttgatg-aagatggaaaattggtttaatgga 404  Q
    |||||||||||| ||| ||||||| |||| ||||||| || |||||||||||||||||||||||||||||||||| || | |||||| ||||||||||||    
T  13840070 gacaactcaagagaactttttggtgtgtgtaattgtgtggtatgagggctctatttataggtgaggaggttgatgaaaaaaggaaaaatggtttaatgga 13839971  T
Q  405 aatgatgaacaattatggtgaa-tttgaaaaaggaatgttaaagttga 451  Q
    ||||||| |||||||||||||| |||||||||||||||||||| ||||    
T  13839970 aatgatggacaattatggtgaattttgaaaaaggaatgttaaacttga 13839923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 163; E-Value: 7e-87
Query Start/End: Original strand, 192 - 451
Target Start/End: Original strand, 34138546 - 34138797
Alignment:
Q  192 taccgaaggaacaaaattctgaagggacttattccgaagggacagaaaaaagagggagaagaaaagaatagctcgtcaacacaagctaaatagggagaag 291  Q
    ||||||||| ||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||    
T  34138546 taccgaagggacaaaattccgaagggacttattccgaagggacagaaaaaggagggagaagaaaagaatagctcgtcaacacaagctaaagagggagaag 34138645  T
Q  292 agagaaaagttctttgacaactcaagataacttttggtctgtgaaattgtgagggatgagggctctatttataggtgaggaggttgatgaag-atggaaa 390  Q
    ||||||||||||||||||||||||| | |||||||||          |||| || ||||||||||||||||||||||||||||||||||||| | |||||    
T  34138646 agagaaaagttctttgacaactcaatagaacttttgg----------tgtgtggaatgagggctctatttataggtgaggaggttgatgaagaaaggaaa 34138735  T
Q  391 attggtttaatggaaatgatgaacaattatggtgaa-tttgaaaaaggaatgttaaagttga 451  Q
    |||| ||||||||||||||||  ||||||||||||| |||||||||||||||||||||||||    
T  34138736 attgatttaatggaaatgatgggcaattatggtgaattttgaaaaaggaatgttaaagttga 34138797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 162; E-Value: 3e-86
Query Start/End: Original strand, 192 - 451
Target Start/End: Original strand, 20542305 - 20542564
Alignment:
Q  192 taccgaaggaacaaaattctgaagggacttattccgaagggacagaaaaaagagggagaagaaaagaatagctcgtcaacacaagctaaatagggagaag 291  Q
    |||||||||  ||||| || |||||||| |||||| ||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||| ||||||    
T  20542305 taccgaaggggcaaaactccgaagggacctattccaaagggacagaaaa-agagggagaagaaaagaataggtcgtcaacacaagctaaatagagagaag 20542403  T
Q  292 agagaaaagttctttgacaactcaagataacttttggtctgtgaaattgtgagggatgagggctctatttataggtgaggaggttgat-gaagatggaaa 390  Q
    ||||||||||||||||||||||| ||| |||||||||| |||||||||||| || |||||||||||||||||||||||||||||||||  || |||||||    
T  20542404 agagaaaagttctttgacaactc-agagaacttttggtatgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgataaaaaatggaaa 20542502  T
Q  391 attggtttaatggaaatgatgaacaattatggtgaa-tttgaaaaaggaatgttaaagttga 451  Q
    ||||||||||||||||||||  |||||||||||||| |||||||||||||| ||||||||||    
T  20542503 attggtttaatggaaatgattgacaattatggtgaattttgaaaaaggaatattaaagttga 20542564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 160; E-Value: 4e-85
Query Start/End: Original strand, 204 - 451
Target Start/End: Complemental strand, 12979121 - 12978870
Alignment:
Q  204 aaaattctgaagggacttattccgaagggacagaaaaaaga-gggagaagaaaagaatagctcgtcaacacaagctaaatagggagaagagagaaaagtt 302  Q
    ||||||| |||||||||||||||||||||| | |||||| | ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  12979121 aaaattcagaagggacttattccgaagggaaaaaaaaaaaaagggagaagaaaagaatagctcgttaacacaagctaaatagggagaagagagaaaagtt 12979022  T
Q  303 ctttgacaactcaagataac-ttttggtctgtgaaattgtgagggatgagggctctatttataggtgaggaggttgatg-aagatggaaaattggtttaa 400  Q
    |||||||||||||||| ||| ||||||| |||| ||||||| || |||||||||||||||||||||||||||||||||| || | |||||| ||||||||    
T  12979021 ctttgacaactcaagagaactttttggtgtgtgtaattgtgtggtatgagggctctatttataggtgaggaggttgatgaaaaaaggaaaaatggtttaa 12978922  T
Q  401 tggaaatgatgaacaattatggtgaa-tttgaaaaaggaatgttaaagttga 451  Q
    ||||||||||| |||||||||||||| |||| ||||||||||||||||||||    
T  12978921 tggaaatgatggacaattatggtgaattttggaaaaggaatgttaaagttga 12978870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 160; E-Value: 4e-85
Query Start/End: Original strand, 223 - 451
Target Start/End: Original strand, 46461550 - 46461780
Alignment:
Q  223 ttccgaagggacagaaaaaagagggagaagaaaagaatagctcgtcaacacaagctaaatagggagaagagag-aaaagttctttgacaactcaagataa 321  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||  ||||||||||||||||| ||    
T  46461550 ttccgaagggacagaaaa-agagggagaagaaaagaatagctcgtcaacacaagctaaatagggagaagagagaaaaaagtctttgacaactcaagagaa 46461648  T
Q  322 cttttggtctgtgaaattgtgagggatgagggctctatttataggtgaggaggttgatg-aagatggaaaattggtttaatggaaatgatgaacaattat 420  Q
    |||||||| |||||||||||| || |||||||| ||||||||||||||||||||||||| || |||||||||||||||||||||||||||| ||||||||    
T  46461649 cttttggtgtgtgaaattgtgtggaatgagggccctatttataggtgaggaggttgatgaaaaatggaaaattggtttaatggaaatgatggacaattat 46461748  T
Q  421 ggtgaa-tttgaaaaaggaatgttaaagttga 451  Q
    |||||| |||||||||| ||||||||||||||    
T  46461749 ggtgaattttgaaaaagaaatgttaaagttga 46461780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 155; E-Value: 4e-82
Query Start/End: Original strand, 237 - 451
Target Start/End: Original strand, 44412760 - 44412977
Alignment:
Q  237 aaaaaagagggagaagaaaagaatagctcgtcaacacaagctaaatagggagaagagagaaaagttctttgacaactcaagataacttttggtctgtg-- 334  Q
    ||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||| |||||||||||||||||| |||||||||| ||||      
T  44412760 aaaaaagagggagaagaaaagaatagctcgtcaacacaatctagatagggagaagagagaaaaattctttgacaactcaagagaacttttggtgtgtgta 44412859  T
Q  335 aaattgtgagggatgagggctctatttataggtgaggaggttgatgaagatggaaaattggtttaatggaaatgatgaacaattatggtgaa-tttgaaa 433  Q
    |||||||| || |||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||| | |||||||||||||| |||||||    
T  44412860 aaattgtgtggaatgagggctctatttataggcgaggaggttgatgaaaatggaaaattggtttaatggaaatgaaggacaattatggtgaattttgaaa 44412959  T
Q  434 aaggaatgttaaagttga 451  Q
    ||||||||||||||||||    
T  44412960 aaggaatgttaaagttga 44412977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 150; E-Value: 4e-79
Query Start/End: Original strand, 193 - 451
Target Start/End: Original strand, 34132236 - 34132485
Alignment:
Q  193 accgaaggaacaaaattctgaagggacttattccgaagggacagaaaaaagagggagaagaaaagaatagctcgtcaacacaagctaaatagggagaaga 292  Q
    |||||||| ||||||||| |||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  34132236 accgaagggacaaaattccgaagggactt-ttccgaagggacagaaaaaggagggagaagaaaagaatagctcgtcaacacaagctaaagagggagaaga 34132334  T
Q  293 gagaaaagttctttgacaactcaagataacttttggtctgtgaaattgtgagggatgagggctctatttataggtgaggaggttgatgaag-atggaaaa 391  Q
    |||||||||||||||||||||||| | |||||||||          || | || ||||||||||||||||||||||||||||||||||||| | ||||||    
T  34132335 gagaaaagttctttgacaactcaatagaacttttgg----------tgagtggaatgagggctctatttataggtgaggaggttgatgaagaaaggaaaa 34132424  T
Q  392 ttggtttaatggaaatgatgaacaattatggtgaa-tttgaaaaaggaatgttaaagttga 451  Q
    ||||||||||||||||||||  |||||||| |||| |||||||||||||||||||||||||    
T  34132425 ttggtttaatggaaatgatgggcaattatgatgaattttgaaaaaggaatgttaaagttga 34132485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 272 - 446
Target Start/End: Original strand, 4831828 - 4832005
Alignment:
Q  272 acaagctaaatagggagaagagagaaaagttctttgacaactcaagataacttttggtctgtgaaattgtgagggatgagggctctatttataggtgagg 371  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| | |||||||||||||||||| |||||||||||||| |||||    
T  4831828 acaagctaaatagggagaagagagaaaagttctttgacaactcaagagaacttttggtgtctgaaattgtgagggatgatggctctatttatagatgagg 4831927  T
Q  372 aggttgatgaagatggaaaattggtttaatggaaatgatgaac--aattatggtgaa-tttgaaaaaggaatgttaaa 446  Q
    |||||||| || ||||||||||||||||||| |||||||| ||  |||||| ||||| |||||||||| |||||||||    
T  4831928 aggttgataaaaatggaaaattggtttaatgaaaatgatggacaaaattatagtgaattttgaaaaagaaatgttaaa 4832005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 193 - 451
Target Start/End: Original strand, 43005071 - 43005348
Alignment:
Q  193 accgaaggaacaaaattctgaagggacttattccgaagggacagaaaaaagagggagaagaaaagaatagctcgtcaacacaagctaaatagggagaaga 292  Q
    |||||||| ||||||||||||| |||||| ||| ||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  43005071 accgaagggacaaaattctgaaaggactttttc-gaagggaca-aaaaaagagggagaagaaaagaataactcgtcaacacaagctaaatagggagaaga 43005168  T
Q  293 gag-aaaagttctttgacaactcaag--------------------ataacttttggtctgtgaaattgtgagggatgagggctctatttataggtgagg 371  Q
    ||| ||||||||||||||||||||||                    | |||||||||| ||||||||| || || |||||||||||||||||||||||||    
T  43005169 gagaaaaagttctttgacaactcaagagaacttttggtgttgtcaaagaacttttggtgtgtgaaattatgtggaatgagggctctatttataggtgagg 43005268  T
Q  372 aggttgatg-aagatggaaaattggtttaatggaaatgatgaacaattatggtgaa-tttgaaaaaggaatgttaaagttga 451  Q
    ||||||||| || ||| |||||||||||||||||||||| | |||| ||||||||| |||||||||||||||||||||||||    
T  43005269 aggttgatgaaaaatgaaaaattggtttaatggaaatga-ggacaa-tatggtgaattttgaaaaaggaatgttaaagttga 43005348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 224 - 329
Target Start/End: Complemental strand, 29477854 - 29477749
Alignment:
Q  224 tccgaagggacagaaaaaagagggagaagaaaagaatagctcgtcaacacaagctaaat-agggagaagagagaaaagttctttgacaactcaagataac 322  Q
    |||||||||||||||||  ||||||||||||||||||||||| |||||||||||||||  |||||||||||||||||||||||||||||||||||| |||    
T  29477854 tccgaagggacagaaaag-gagggagaagaaaagaatagctcatcaacacaagctaaaggagggagaagagagaaaagttctttgacaactcaagagaac 29477756  T
Q  323 ttttggt 329  Q
    |||||||    
T  29477755 ttttggt 29477749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 226 - 328
Target Start/End: Complemental strand, 6897996 - 6897894
Alignment:
Q  226 cgaagggacagaaaaa-agagggagaagaaaagaatagctcgtcaacacaagctaaat-agggagaagagagaaaagttctttgacaactcaagataact 323  Q
    |||||||||||||||| || |||||||  |||||||||||| |||||||||||||||  |||||||||||||||||||||||||||||||||||| ||||    
T  6897996 cgaagggacagaaaaatagggggagaa--aaagaatagctcatcaacacaagctaaaggagggagaagagagaaaagttctttgacaactcaagagaact 6897899  T
Q  324 tttgg 328  Q
    |||||    
T  6897898 tttgg 6897894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 357 - 451
Target Start/End: Complemental strand, 22347346 - 22347250
Alignment:
Q  357 tatttataggtgaggaggttgatgaaga-tggaaaattggtttaatggaaatgatgaacaattatggtgaa-tttgaaaaaggaatgttaaagttga 451  Q
    ||||||| |||||||||||||||||| | |||||||||||||||||| |||||||| ||||||||| |||| |||||||||||||||||||||||||    
T  22347346 tatttattggtgaggaggttgatgaaaaatggaaaattggtttaatgaaaatgatggacaattatgatgaattttgaaaaaggaatgttaaagttga 22347250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 357 - 451
Target Start/End: Original strand, 7528458 - 7528555
Alignment:
Q  357 tatttataggtgaggaggttgatgaagat--ggaaaattggtttaatggaaatgatgaacaattatggtgaa-tttgaaaaaggaatgttaaagttga 451  Q
    |||||||||||||||||||||||||| |   |||||||| ||||||||||||||||| |||||||||||||| ||| |||||||||||||||||||||    
T  7528458 tatttataggtgaggaggttgatgaaaaaaaggaaaattagtttaatggaaatgatggacaattatggtgaattttaaaaaaggaatgttaaagttga 7528555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 238 - 373
Target Start/End: Complemental strand, 25831936 - 25831800
Alignment:
Q  238 aaaaagagggagaagaaaagaatagctcgtcaacacaagctaaat-agggagaagagagaaaagttctttgacaactcaagataacttttggtctgtgaa 336  Q
    |||||||| |||||||||| | |||||| |||||| ||||||||| | |||||||||| ||||||||||||||||||||||| |||||||||| |  |||    
T  25831936 aaaaagagagagaagaaaatattagctcatcaacataagctaaatgaaggagaagagataaaagttctttgacaactcaagagaacttttggtgtaagaa 25831837  T
Q  337 attgtgagggatgagggctctatttataggtgaggag 373  Q
       |||||  ||||  |||||||||||||||||||||    
T  25831836 gaagtgagaaatgaaagctctatttataggtgaggag 25831800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 238 - 327
Target Start/End: Complemental strand, 23615907 - 23615818
Alignment:
Q  238 aaaaagagggagaagaaaagaatagctcgtcaacacaagctaaat-agggagaagagagaaaagttctttgacaactcaagataacttttg 327  Q
    ||||||||||||| ||||||||||| ||||||||||||||||||| ||||||||||||| ||||||  ||||||| |||| | ||||||||    
T  23615907 aaaaagagggagatgaaaagaatagttcgtcaacacaagctaaatgagggagaagagag-aaagtttattgacaattcaaaagaacttttg 23615818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 387 - 451
Target Start/End: Original strand, 18156751 - 18156816
Alignment:
Q  387 gaaaattggtttaatggaaatgatgaacaattatggtgaa-tttgaaaaaggaatgttaaagttga 451  Q
    |||||||||||||||| |||||||| ||||||||||| || |||||||||||||||||||||||||    
T  18156751 gaaaattggtttaatgaaaatgatggacaattatggtaaattttgaaaaaggaatgttaaagttga 18156816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 192 - 299
Target Start/End: Original strand, 18156634 - 18156747
Alignment:
Q  192 taccgaaggaacaaaattctgaagggacttattccgaagggacagaaaa-------aagagggagaagaaaagaatagctcgtcaacacaagctaaatag 284  Q
    ||||||||| ||||||||| |||||||||| |||||||| |||||||||       || ||| |||| |||||||||  |||||||||||||||| ||||    
T  18156634 taccgaagggacaaaattcagaagggactt-ttccgaagagacagaaaagaaaaaaaaaaggaagaataaaagaatacttcgtcaacacaagctagatag 18156732  T
Q  285 ggagaagagagaaaa 299  Q
    |||||||||||||||    
T  18156733 ggagaagagagaaaa 18156747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 261 - 317
Target Start/End: Original strand, 32158556 - 32158613
Alignment:
Q  261 agctcgtcaacacaagctaaat-agggagaagagagaaaagttctttgacaactcaag 317  Q
    |||||||||||||||||| ||  |||||||||||| ||||||||||||||||||||||    
T  32158556 agctcgtcaacacaagctgaaggagggagaagagaaaaaagttctttgacaactcaag 32158613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 20 - 55
Target Start/End: Complemental strand, 6644946 - 6644911
Alignment:
Q  20 acacacacacatttctcatttatatttacattggac 55  Q
    ||||||||||||||||||||||||||||||||||||    
T  6644946 acacacacacatttctcatttatatttacattggac 6644911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 404 - 451
Target Start/End: Complemental strand, 7528456 - 7528408
Alignment:
Q  404 aaatgatgaacaattatggtgaa-tttgaaaaaggaatgttaaagttga 451  Q
    |||||||| |||||||||||||| ||| |||||||||||||||||||||    
T  7528456 aaatgatggacaattatggtgaattttaaaaaaggaatgttaaagttga 7528408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 23 - 56
Target Start/End: Original strand, 1857836 - 1857869
Alignment:
Q  23 cacacacatttctcatttatatttacattggacc 56  Q
    ||||||| ||||||||||||||||||||||||||    
T  1857836 cacacacctttctcatttatatttacattggacc 1857869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 23 - 56
Target Start/End: Original strand, 6851295 - 6851328
Alignment:
Q  23 cacacacatttctcatttatatttacattggacc 56  Q
    ||||||| ||||||||||||||||||||||||||    
T  6851295 cacacacttttctcatttatatttacattggacc 6851328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 23 - 56
Target Start/End: Complemental strand, 12979285 - 12979252
Alignment:
Q  23 cacacacatttctcatttatatttacattggacc 56  Q
    ||||||| ||||||||||||||||||||||||||    
T  12979285 cacacacttttctcatttatatttacattggacc 12979252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 23 - 56
Target Start/End: Complemental strand, 13832335 - 13832302
Alignment:
Q  23 cacacacatttctcatttatatttacattggacc 56  Q
    ||||||| ||||||||||||||||||||||||||    
T  13832335 cacacacttttctcatttatatttacattggacc 13832302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 23 - 56
Target Start/End: Complemental strand, 13840365 - 13840332
Alignment:
Q  23 cacacacatttctcatttatatttacattggacc 56  Q
    ||||||| ||||||||||||||||||||||||||    
T  13840365 cacacacttttctcatttatatttacattggacc 13840332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 23 - 56
Target Start/End: Original strand, 18303640 - 18303673
Alignment:
Q  23 cacacacatttctcatttatatttacattggacc 56  Q
    ||||||| ||||||||||||||||||||||||||    
T  18303640 cacacacttttctcatttatatttacattggacc 18303673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 23 - 56
Target Start/End: Original strand, 20542137 - 20542170
Alignment:
Q  23 cacacacatttctcatttatatttacattggacc 56  Q
    ||||||| ||||||||||||||||||||||||||    
T  20542137 cacacacttttctcatttatatttacattggacc 20542170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 23 - 56
Target Start/End: Complemental strand, 28415945 - 28415912
Alignment:
Q  23 cacacacatttctcatttatatttacattggacc 56  Q
    ||||||| ||||||||||||||||||||||||||    
T  28415945 cacacacttttctcatttatatttacattggacc 28415912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 23 - 56
Target Start/End: Original strand, 34132115 - 34132148
Alignment:
Q  23 cacacacatttctcatttatatttacattggacc 56  Q
    ||||||| ||||||||||||||||||||||||||    
T  34132115 cacacacttttctcatttatatttacattggacc 34132148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 223 - 298
Target Start/End: Complemental strand, 26286687 - 26286614
Alignment:
Q  223 ttccgaagggacagaaaaaagagggagaagaaaagaatagctcgtcaacacaagctaaatagggagaagagagaaa 298  Q
    ||||||||||||||||| |||| |  || || ||||||| ||||||||||||||||    ||||||||||||||||    
T  26286687 ttccgaagggacagaaataagaagatgaggagaagaataactcgtcaacacaagct--ggagggagaagagagaaa 26286614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 20 - 56
Target Start/End: Original strand, 43004916 - 43004952
Alignment:
Q  20 acacacacacatttctcatttatatttacattggacc 56  Q
    |||||||||| |||||||||||||||||||| |||||    
T  43004916 acacacacacttttctcatttatatttacataggacc 43004952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119 (Bit Score: 180; Significance: 5e-97; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 180; E-Value: 5e-97
Query Start/End: Original strand, 193 - 451
Target Start/End: Original strand, 39619 - 39877
Alignment:
Q  193 accgaaggaacaaaattctgaagggacttattccgaagggacagaaaaaagagggagaagaaaagaatagctcgtcaacacaagctaaatagggagaaga 292  Q
    |||||||| ||||||||  |||  ||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| | ||||||||    
T  39619 accgaagggacaaaatttcgaacagactt-ttccgaagggacagaaaaaagagggagaagaaaataatagctcgtcaacacaagctaaacatggagaaga 39717  T
Q  293 gagaaaagttctttgacaactcaagataacttttggtctgtgaaattgtgagggatgagggctctatttataggtgaggaggttgatgaagatggaaaat 392  Q
    |||||||||||||||||||||||||| |||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||    
T  39718 gagaaaagttctttgacaactcaagagaacttttggtgtgtgaaattgtgaggaatgagggctctatttataggtgaggaggttgatgaaaatggaaaat 39817  T
Q  393 tggtttaatggaaatgatgaacaattatggtga-atttgaaaaaggaatgttaaagttga 451  Q
    ||||||||||||||||||| ||||||||| |||  ||||||||| |||||||||||||||    
T  39818 tggtttaatggaaatgatggacaattatgatgacttttgaaaaatgaatgttaaagttga 39877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1699 (Bit Score: 174; Significance: 2e-93; HSPs: 2)
Name: scaffold1699
Description:

Target: scaffold1699; HSP #1
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 212 - 451
Target Start/End: Original strand, 813 - 1054
Alignment:
Q  212 gaagggacttattccgaagggacagaaaaaagagggagaagaaaagaatagctcgtcaacacaagctaaatagggagaagagagaaaagttctttgacaa 311  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  813 gaagggacttattccgaagggacagaaaaaagagggagaagaatagaaaagctcgtcaacacaagctaaatagggagaagaaagaaaagttctttgacaa 912  T
Q  312 ctcaagataacttttggtctgtgaaattgtgagggatgagggctctatttataggtgaggaggttgatg-aagatggaaaattggtttaatggaaatgat 410  Q
    ||||||| ||||||| || ||| |||||||| || |||||||||||||||||||||||||||||||||| || | |||||| ||||||||||||||||||    
T  913 ctcaagagaactttttgtgtgtcaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaaaggaaaaatggtttaatggaaatgat 1012  T
Q  411 gaacaattatggtgaa-tttgaaaaaggaatgttaaagttga 451  Q
    | |||||||||||||| |||||||||||||||||||||||||    
T  1013 ggacaattatggtgaattttgaaaaaggaatgttaaagttga 1054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1699; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 20 - 56
Target Start/End: Original strand, 625 - 661
Alignment:
Q  20 acacacacacatttctcatttatatttacattggacc 56  Q
    |||| ||||| ||||||||||||||||||||||||||    
T  625 acacgcacacttttctcatttatatttacattggacc 661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 174; Significance: 2e-93; HSPs: 2)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 212 - 451
Target Start/End: Complemental strand, 14744 - 14504
Alignment:
Q  212 gaagggacttattccgaagggacagaaaaaagagggagaagaaaagaatagctcgtcaacacaagctaaatagggagaagagagaaaagttctttgacaa 311  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||  |||||||||||||||||||||||||||||    
T  14744 gaagggacttattccgaagggacagaaaaaagagggagaagaaaagaatagctcgtcaacacaaactaag-agggagaagagagaaaagttctttgacaa 14646  T
Q  312 ctcaagataacttttggtctgtgaaattgtgagggatgagggctctatttataggtgaggaggttgatg-aagatggaaaattggtttaatggaaatgat 410  Q
    ||||| | |||||||||| | |||||||||| || |||||||||||||||||||||||||||||||||| || ||||||||||||||||||| |||||||    
T  14645 ctcaatagaacttttggtgtctgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaatggaaaattggtttaatgaaaatgat 14546  T
Q  411 gaacaattatggtgaa-tttgaaaaaggaatgttaaagttga 451  Q
    | |||||||||||||| |||||||||||||||||||||||||    
T  14545 ggacaattatggtgaattttgaaaaaggaatgttaaagttga 14504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 23 - 56
Target Start/End: Complemental strand, 14916 - 14883
Alignment:
Q  23 cacacacatttctcatttatatttacattggacc 56  Q
    ||||||| ||||||||||||||||||||||||||    
T  14916 cacacacttttctcatttatatttacattggacc 14883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 174; Significance: 2e-93; HSPs: 35)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 192 - 451
Target Start/End: Complemental strand, 19368125 - 19367865
Alignment:
Q  192 taccgaaggaacaaaattctgaagggacttattccgaagggacagaaaaaagagggagaagaaaagaatagctcgtcaacacaagctaaatagggagaag 291  Q
    ||||||||| ||||||||| |||||||||| |||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||| |||||||||    
T  19368125 taccgaagggacaaaattccgaagggactt-ttccgaagggacggaaaaaagagggagaagaaaagaatagctggtcaacacaagctaaaaagggagaag 19368027  T
Q  292 agagaaaagttctttgacaactcaagataacttttggtctgtgaaattgtgagggatgagggctctatttataggtgaggaggttgatg-aagatggaaa 390  Q
    |||||||| |||||||||||||||||| |||||||||| |||||||||||| || ||||||| |||||||||||||||||||||||||| || | |||||    
T  19368026 agagaaaaattctttgacaactcaagagaacttttggtgtgtgaaattgtgtggaatgagggatctatttataggtgaggaggttgatgaaaaaaggaaa 19367927  T
Q  391 attggtttaatggaaatgatgaacaattatggtgaa-tttgaaaaaggaatgttaaagttga 451  Q
    ||| ||||||||||||||||| |||||||||||||| ||||||||||||||| |||||||||    
T  19367926 atttgtttaatggaaatgatggacaattatggtgaattttgaaaaaggaatgataaagttga 19367865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 172; E-Value: 3e-92
Query Start/End: Original strand, 222 - 451
Target Start/End: Original strand, 2416135 - 2416366
Alignment:
Q  222 attccgaagggacagaaaaaagagggagaagaaaagaatagctcgtcaacacaagctaaatagggagaagagagaaaagttctttgacaactcaagataa 321  Q
    ||||||||||||||||||||||||| ||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  2416135 attccgaagggacagaaaaaagaggaagaagaaaaaaatagctcgttaacacaagctaaatagggagaagagagaaaagttctttgacaactcaagagaa 2416234  T
Q  322 cttttggtctgtgaaattgtgagggatgagggctctatttataggtgaggaggttgatg-aagatggaaaattggtttaatggaaatgatgaacaattat 420  Q
    |||||||| |||||||||||| || |||||||||||||||||||||||||||||||||| || | |||||||||||||||||||||||||| ||||||||    
T  2416235 cttttggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaaaggaaaattggtttaatggaaatgatggacaattat 2416334  T
Q  421 ggtgaa-tttgaaaaaggaatgttaaagttga 451  Q
    |||||| ||||||||| |||||||||||||||    
T  2416335 ggtgaattttgaaaaaagaatgttaaagttga 2416366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 222 - 451
Target Start/End: Complemental strand, 20429991 - 20429759
Alignment:
Q  222 attccgaagggacagaaaaaagagggagaagaaaagaatagctcgtcaacacaagctaaatagggagaagagagaaaagttctttgacaactcaagataa 321  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||    
T  20429991 attccgaagggacagaaaaaagagggagaagaaaagaatagctcgtcaacacaagctaaaaagggagaagagagaaaagttctttgacaactcaagagaa 20429892  T
Q  322 c-ttttggtctgtgaaattgtgagggatgagggctctatttataggtgaggaggttgatg-aagatggaaaattggtttaatggaaatgatgaacaatta 419  Q
    | ||||||| |||||||||||| || ||||||| |||||||||||||||||||||| ||| || |||||||||||||||||||||||||||| |||||||    
T  20429891 ctttttggtgtgtgaaattgtgtggaatgagggttctatttataggtgaggaggttaatgaaaaatggaaaattggtttaatggaaatgatggacaatta 20429792  T
Q  420 tggtgaa-tttgaaaaaggaatgttaaagttga 451  Q
    ||||||| |||||||||| ||||||||||||||    
T  20429791 tggtgaattttgaaaaagaaatgttaaagttga 20429759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 167; E-Value: 3e-89
Query Start/End: Original strand, 204 - 451
Target Start/End: Complemental strand, 31540619 - 31540369
Alignment:
Q  204 aaaattctgaagggacttattccgaagggacagaaaaaagagggagaagaaaagaatagctcgtcaacacaagctaaatagggagaagagagaaaagttc 303  Q
    ||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  31540619 aaaattccgaagggacttattccgaagggacagaaaaaaaagggagaagaaaagaatagctcattaacacaagctaaatagggagaagagagaaaagttc 31540520  T
Q  304 tttgacaactcaagataac-ttttggtctgtgaaattgtgagggatgagggctctatttataggtgaggaggttgatg-aagatggaaaattggtttaat 401  Q
    ||||||||||||||| ||| ||||||| |||| ||||||| || |||||||||||||||||||||||||||||||||| || | |||||| |||||||||    
T  31540519 tttgacaactcaagagaactttttggtgtgtgtaattgtgtggtatgagggctctatttataggtgaggaggttgatgaaaaaaggaaaaatggtttaat 31540420  T
Q  402 ggaaatgatgaacaattatggtgaa-tttgaaaaaggaatgttaaagttga 451  Q
    |||||||||| |||||||| ||||| |||| ||||||||||||||||||||    
T  31540419 ggaaatgatggacaattatagtgaattttggaaaaggaatgttaaagttga 31540369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 167; E-Value: 3e-89
Query Start/End: Original strand, 204 - 451
Target Start/End: Complemental strand, 31549188 - 31548938
Alignment:
Q  204 aaaattctgaagggacttattccgaagggacagaaaaaagagggagaagaaaagaatagctcgtcaacacaagctaaatagggagaagagagaaaagttc 303  Q
    ||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  31549188 aaaattccgaagggacttattccgaagggacagaaaaaaaagggagaagaaaagaatagctcattaacacaagctaaatagggagaagagagaaaagttc 31549089  T
Q  304 tttgacaactcaagataac-ttttggtctgtgaaattgtgagggatgagggctctatttataggtgaggaggttgatg-aagatggaaaattggtttaat 401  Q
    ||||||||||||||| ||| ||||||| |||| ||||||| || |||||||||||||||||||||||||||||||||| || | |||||| |||||||||    
T  31549088 tttgacaactcaagagaactttttggtgtgtgtaattgtgtggtatgagggctctatttataggtgaggaggttgatgaaaaaaggaaaaatggtttaat 31548989  T
Q  402 ggaaatgatgaacaattatggtgaa-tttgaaaaaggaatgttaaagttga 451  Q
    |||||||||| |||||||| ||||| |||| ||||||||||||||||||||    
T  31548988 ggaaatgatggacaattatagtgaattttggaaaaggaatgttaaagttga 31548938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 167; E-Value: 3e-89
Query Start/End: Original strand, 212 - 451
Target Start/End: Original strand, 44831974 - 44832215
Alignment:
Q  212 gaagggacttattccgaagggacagaaaa-aagagggagaagaaaagaatagctcgtcaacacaagctaaatagggagaagagagaaaagttctttgaca 310  Q
    |||||||||| |||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  44831974 gaagggactt-ttccgaagggacagaaaaaaagagggagaagaaaagaatagctcgttaacacaagctaaagagggagaagagagaaaagttctttgaca 44832072  T
Q  311 actcaagataacttttggtctgtgaaattgtgagggatgagggctctatttataggtgaggaggttgatg-aagatggaaaattggtttaatggaaatga 409  Q
    |||||||| |||||||||| | |||||||||| || |||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||| |    
T  44832073 actcaagagaacttttggtgtctgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaatggaaaattggtttaatggaaataa 44832172  T
Q  410 tgaacaattatggtgaa-tttgaaaaaggaatgttaaagttga 451  Q
    || |||||||||||||| ||||||||| |||||||||||||||    
T  44832173 tggacaattatggtgaattttgaaaaaagaatgttaaagttga 44832215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 165; E-Value: 5e-88
Query Start/End: Original strand, 213 - 451
Target Start/End: Original strand, 15473289 - 15473529
Alignment:
Q  213 aagggacttattccgaagggacagaaaaaagagggagaagaaaagaatagctcgtcaacacaagctaaatagggagaagagagaaaagttctttgacaac 312  Q
    |||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  15473289 aagggacttattccgaagggacagaaaaaagagggaaaataaaagaatagctcgtcaacacaagctaaagagggagaagagagaaaagttctttgacaac 15473388  T
Q  313 tcaagataacttttggtctgtgaaattgtgagggatgagggctctatttataggtgaggaggttgatg-aagatggaaaattggtttaatggaaatgatg 411  Q
    |||||| |||||||||| |||||||||||| || |||||| ||||||||||| || |||||||||||| || | |||||||||||||||| ||||||||     
T  15473389 tcaagagaacttttggtgtgtgaaattgtgtggaatgaggtctctatttataagtaaggaggttgatgaaaaaaggaaaattggtttaatagaaatgatt 15473488  T
Q  412 aacaattatggtgaa-tttgaaaaaggaatgttaaagttga 451  Q
     |||||||||||||| |||||||||||||||||||||||||    
T  15473489 gacaattatggtgaattttgaaaaaggaatgttaaagttga 15473529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 158; E-Value: 7e-84
Query Start/End: Original strand, 226 - 451
Target Start/End: Complemental strand, 51968560 - 51968331
Alignment:
Q  226 cgaagggacagaaaaaaga-gggagaagaaaagaatagctcgtcaacacaagctaaat-agggagaagagagaaaagttctttgacaactcaagataact 323  Q
    ||||||||||||||||| | |||||||||||| ||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||| ||||    
T  51968560 cgaagggacagaaaaaaaaagggagaagaaaaaaatagctcgtcaacacaagctaaatgagggagaagagagaaaaattctttgacaactcaagagaact 51968461  T
Q  324 ttt-ggtctgtgaaattgtgagggatgagggctctatttataggtgaggaggttgatgaagatggaaaattggtttaatggaaatgatgaacaattatgg 422  Q
    ||| ||| || |||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||  |||||||||    
T  51968460 ttttggtgtgagaaattgtgagggatgagggatctatttataggtgaggaggttgatgaaaatggaaaattggtttaatggaaatgatgggcaattatgg 51968361  T
Q  423 tgaa-tttgaaaaaggaatgttaaagttga 451  Q
    |||| |||||||||||||||||||||||||    
T  51968360 tgaattttgaaaaaggaatgttaaagttga 51968331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 222 - 451
Target Start/End: Complemental strand, 47109006 - 47108775
Alignment:
Q  222 attccgaagggacagaaaaaagagggagaagaaaagaatagctcgtcaacacaagctaaatagggagaagagagaaaagttctttgacaactcaagataa 321  Q
    |||| ||||||||||||||||| | ||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| ||    
T  47109006 attctgaagggacagaaaaaagggtgagaagaaaagaatagctcgttaacacaagctaaagagggagaagagagaaaagttctttgacaactcaagagaa 47108907  T
Q  322 cttttggtctgtgaaattgtgagggatgagggctctatttataggtgaggaggttgatg-aagatggaaaattggtttaatggaaatgatgaacaattat 420  Q
    |||||||| |||||||||||| || ||||||||||||||||||||||||||| |||||| || | |||||||||||||||||||||| ||| | ||||||    
T  47108906 cttttggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggagtttgatgaaaaaaggaaaattggtttaatggaaatcatggagaattat 47108807  T
Q  421 ggtgaa-tttgaaaaaggaatgttaaagttga 451  Q
    |||||| |||||||||| ||||||||||||||    
T  47108806 ggtgaattttgaaaaagaaatgttaaagttga 47108775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 225 - 451
Target Start/End: Original strand, 3432337 - 3432562
Alignment:
Q  225 ccgaagggacagaaaaaagagggagaagaaaagaatagctcgtcaacacaagctaaatagggagaagagagaaaagttctttgacaactcaagataactt 324  Q
    |||||||||||||||||||  |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| |||||    
T  3432337 ccgaagggacagaaaaaag--ggagaagaaaagaatagctcgttaacacaagctaaatagggagaagagagaaaagttcattgacaactcaagagaactt 3432434  T
Q  325 ttggtctgtgaaattgtgagggatgagggctctatttataggtgaggaggttgatg-aagatggaaaattggtttaatggaaatgatgaacaattatggt 423  Q
    || |  ||| |||||||| || |||||||||||||||||||||||||||||||||| || | |||||| ||||||||||||||||||| |||||||||||    
T  3432435 tttg-gtgtcaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaaaggaaaaatggtttaatggaaatgatggacaattatggt 3432533  T
Q  424 gaa-tttgaaaaaggaatgttaaagttga 451  Q
    ||| ||| |||||||||||||||||||||    
T  3432534 gaatttttaaaaaggaatgttaaagttga 3432562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 224 - 329
Target Start/End: Original strand, 12906640 - 12906745
Alignment:
Q  224 tccgaagggacagaaaaaagagggagaagaaaagaatagctcgtcaacacaagctaaa-tagggagaagagagaaaagttctttgacaactcaagataac 322  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||  |||||||||| |||||||||||||||||||||||||||||    
T  12906640 tccgaagggacagaaaa-agagggagaagaaaagaatagctcgtcaacacaagctaaaggagggagaagatagaaaagttctttgacaactcaagataac 12906738  T
Q  323 ttttggt 329  Q
    |||||||    
T  12906739 ttttggt 12906745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 224 - 329
Target Start/End: Original strand, 36725206 - 36725311
Alignment:
Q  224 tccgaagggacagaaaaaagagggagaagaaaagaatagctcgtcaacacaagctaaa-tagggagaagagagaaaagttctttgacaactcaagataac 322  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||| ||||||||||||| | |||    
T  36725206 tccgaagggacagaaaa-agagggagaagaaaagaatagctcgtcaacacaagctaaaggagggagaagagagaaaagttatttgacaactcaaaagaac 36725304  T
Q  323 ttttggt 329  Q
    |||||||    
T  36725305 ttttggt 36725311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 237 - 373
Target Start/End: Complemental strand, 2493406 - 2493269
Alignment:
Q  237 aaaaaagagggagaagaaaagaatagctcgtcaacacaagctaaat-agggagaagagagaaaagttctttgacaactcaagataacttttggtctgtga 335  Q
    |||| ||||||||| |||||||||| |||||||||||||||||||| |||||||||||||||||||| ||||||||||||| | |||||||||| ||       
T  2493406 aaaagagagggagatgaaaagaataactcgtcaacacaagctaaatgagggagaagagagaaaagttttttgacaactcaaaagaacttttggtgtgatc 2493307  T
Q  336 aattgtgagggatgagggctctatttataggtgaggag 373  Q
    |   |||||| ||||| |||||||||||||||||||||    
T  2493306 agaagtgaggaatgagagctctatttataggtgaggag 2493269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 238 - 373
Target Start/End: Complemental strand, 23191605 - 23191469
Alignment:
Q  238 aaaaagagggagaagaaaagaatagctcgtcaacacaagctaaat-agggagaagagagaaaagttctttgacaactcaagataacttttggtctgtgaa 336  Q
    ||||||||||||| |||||||||| |||||||||||||||||||| |||||||||||||||| ||||||||||||||||| | | |||||||  || |||    
T  23191605 aaaaagagggagaggaaaagaataactcgtcaacacaagctaaatgagggagaagagagaaatgttctttgacaactcaaaagatcttttggggtgagaa 23191506  T
Q  337 attgtgagggatgagggctctatttataggtgaggag 373  Q
       |||||| | ||| |||||||||||||||||||||    
T  23191505 gaagtgaggaaagagagctctatttataggtgaggag 23191469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 228 - 329
Target Start/End: Complemental strand, 33380521 - 33380420
Alignment:
Q  228 aagggacagaaaaaagagggagaagaaaagaatagctcgtcaacacaagctaaa-tagggagaagagagaaaagttctttgacaactcaagataactttt 326  Q
    |||||||||||||| |||||||| ||||||||||||||||||||||||||||||  |||||| ||||||||||||||||||||||||||| | |||||||    
T  33380521 aagggacagaaaaa-gagggagaggaaaagaatagctcgtcaacacaagctaaaggagggagcagagagaaaagttctttgacaactcaaaagaactttt 33380423  T
Q  327 ggt 329  Q
    |||    
T  33380422 ggt 33380420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 224 - 328
Target Start/End: Complemental strand, 19309206 - 19309102
Alignment:
Q  224 tccgaagggacagaaaaaagagggagaagaaaagaatagctcgtcaacacaagctaaa-tagggagaagagagaaaagttctttgacaactcaagataac 322  Q
    ||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||  | |||||| ||||||||||||||| ||||||||||| |||    
T  19309206 tccgaagggtcagaaaaa-gagggagaagaaaagaatagctcgtcaacacaagctaaaggaaggagaaaagagaaaagttctttaacaactcaagagaac 19309108  T
Q  323 ttttgg 328  Q
    ||||||    
T  19309107 ttttgg 19309102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 224 - 327
Target Start/End: Original strand, 31064454 - 31064557
Alignment:
Q  224 tccgaagggacagaaaaaagagggagaagaaaagaatagctcgtcaacacaagctaaat-agggagaagagagaaaagttctttgacaactcaagataac 322  Q
    |||||||||||| ||||| ||||||||| |||||||||| ||||||||||||||||||  ||||||||||||||||| |||||||||||||||||| |||    
T  31064454 tccgaagggacataaaaa-gagggagaataaaagaatagttcgtcaacacaagctaaaggagggagaagagagaaaaattctttgacaactcaagagaac 31064552  T
Q  323 ttttg 327  Q
    |||||    
T  31064553 ttttg 31064557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 224 - 325
Target Start/End: Original strand, 8770103 - 8770204
Alignment:
Q  224 tccgaagggacagaaaaaagagggagaagaaaagaatagctcgtcaacacaagctaaa-tagggagaagagagaaaagttctttgacaactcaagataac 322  Q
    ||||||||||| ||||| |||||||||||||||||||||||| |||||| ||||||||  ||||||||||||||||| |||||||||||||||||| |||    
T  8770103 tccgaagggacggaaaa-agagggagaagaaaagaatagctcttcaacaaaagctaaaggagggagaagagagaaaaattctttgacaactcaagagaac 8770201  T
Q  323 ttt 325  Q
    |||    
T  8770202 ttt 8770204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 238 - 327
Target Start/End: Complemental strand, 25661439 - 25661349
Alignment:
Q  238 aaaaagagggagaagaaaagaatagctcgtcaacacaagctaaat-agggagaagagagaaaagttctttgacaactcaagataacttttg 327  Q
    |||||||||||||||||| ||||||||||||||||||||| |||  ||||||| |||||||||||||||||||||||||||| ||||||||    
T  25661439 aaaaagagggagaagaaatgaatagctcgtcaacacaagccaaaggagggagatgagagaaaagttctttgacaactcaagagaacttttg 25661349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 226 - 314
Target Start/End: Complemental strand, 27761435 - 27761347
Alignment:
Q  226 cgaagggacagaaaaaagagggagaagaaaagaatagctcgtcaacacaagctaaa-tagggagaagagagaaaagttctttgacaactc 314  Q
    |||||||||||||||| |||||||| ||||||||||||||||||||||||||||||  |||||||||||||||||||| |||||||||||    
T  27761435 cgaagggacagaaaaa-gagggagaggaaaagaatagctcgtcaacacaagctaaaggagggagaagagagaaaagttatttgacaactc 27761347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 227 - 373
Target Start/End: Complemental strand, 28857656 - 28857508
Alignment:
Q  227 gaagggacagaaaaaagagggagaagaaaagaatagctcgtcaacacaa-gctaaat-agggagaagagagaaaagttctttgacaactcaagataactt 324  Q
    ||||| ||||||||||||||||||||||||||||||||   |||||||| ||||||  |||||||||| ||||||||||||||||||||||| | |||||    
T  28857656 gaaggaacagaaaaaagagggagaagaaaagaatagcttagcaacacaaagctaaaggagggagaagacagaaaagttctttgacaactcaaaagaactt 28857557  T
Q  325 ttggtctgtgaaattgtgagggatgagggctctatttataggtgaggag 373  Q
    ||||  || | |   |||||| |  || |||||||||||||||||||||    
T  28857556 ttggagtgagtagaagtgaggaacaagagctctatttataggtgaggag 28857508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 238 - 329
Target Start/End: Complemental strand, 9352894 - 9352802
Alignment:
Q  238 aaaaagagggagaagaaaagaatagctcgtcaacacaagctaaa-tagggagaagagagaaaagttctttgacaactcaagataacttttggt 329  Q
    |||||||||| |||||||||||||||||||||||| ||| ||||  ||||||||||||||||| | |||||| ||||||||| ||||||||||    
T  9352894 aaaaagagggtgaagaaaagaatagctcgtcaacagaagataaaggagggagaagagagaaaaatgctttgaaaactcaagagaacttttggt 9352802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 212 - 267
Target Start/End: Complemental strand, 47110407 - 47110352
Alignment:
Q  212 gaagggacttattccgaagggacagaaaaaagagggagaagaaaagaatagctcgt 267  Q
    |||||||||| ||||||||||||||||||||| |||||||||||||||||||||||    
T  47110407 gaagggactttttccgaagggacagaaaaaagggggagaagaaaagaatagctcgt 47110352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 238 - 329
Target Start/End: Complemental strand, 9328048 - 9327956
Alignment:
Q  238 aaaaagagggagaagaaaagaatagctcgtcaacacaagctaaat-agggagaagagagaaaagttctttgacaactcaagataacttttggt 329  Q
    ||||||||||  |||||||||||||||| |||||| ||| ||||  ||||||||||||||||| | |||||| ||||||||| ||||||||||    
T  9328048 aaaaagagggcaaagaaaagaatagctcatcaacagaagataaaggagggagaagagagaaaaatgctttgaaaactcaagagaacttttggt 9327956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 9 - 56
Target Start/End: Original strand, 44831793 - 44831840
Alignment:
Q  9 gaaatgaaaggacacacacacatttctcatttatatttacattggacc 56  Q
    ||||| ||||||||||||||| ||||||||||||||||||||||||||    
T  44831793 gaaataaaaggacacacacacttttctcatttatatttacattggacc 44831840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 254 - 328
Target Start/End: Complemental strand, 24159382 - 24159307
Alignment:
Q  254 aaagaatagctcgtcaacacaagctaaat-agggagaagagagaaaagttctttgacaactcaagataacttttgg 328  Q
    |||||||| | |||||||||||||||||  ||| | |||||||||||||  ||||||||||||||| |||||||||    
T  24159382 aaagaataacacgtcaacacaagctaaaagaggaaaaagagagaaaagtcatttgacaactcaagagaacttttgg 24159307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 224 - 297
Target Start/End: Original strand, 9252831 - 9252904
Alignment:
Q  224 tccgaagggacagaaaaaagagggagaagaaaagaatagctcgtcaacacaagctaaa-tagggagaagagagaa 297  Q
    |||||||||||| ||||||||||| |||||||||||||| ||||||||| ||  ||||  |||||||||||||||    
T  9252831 tccgaagggaca-aaaaaagagggcgaagaaaagaataggtcgtcaacataaattaaaggagggagaagagagaa 9252904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 23 - 56
Target Start/End: Original strand, 2415998 - 2416031
Alignment:
Q  23 cacacacatttctcatttatatttacattggacc 56  Q
    ||||||| ||||||||||||||||||||||||||    
T  2415998 cacacacttttctcatttatatttacattggacc 2416031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 23 - 56
Target Start/End: Original strand, 3432182 - 3432215
Alignment:
Q  23 cacacacatttctcatttatatttacattggacc 56  Q
    ||||||| ||||||||||||||||||||||||||    
T  3432182 cacacacttttctcatttatatttacattggacc 3432215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 23 - 56
Target Start/End: Complemental strand, 20430167 - 20430134
Alignment:
Q  23 cacacacatttctcatttatatttacattggacc 56  Q
    ||||||| ||||||||||||||||||||||||||    
T  20430167 cacacacttttctcatttatatttacattggacc 20430134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 23 - 56
Target Start/End: Complemental strand, 31540783 - 31540750
Alignment:
Q  23 cacacacatttctcatttatatttacattggacc 56  Q
    ||||||| ||||||||||||||||||||||||||    
T  31540783 cacacacttttctcatttatatttacattggacc 31540750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 23 - 56
Target Start/End: Complemental strand, 31549352 - 31549319
Alignment:
Q  23 cacacacatttctcatttatatttacattggacc 56  Q
    ||||||| ||||||||||||||||||||||||||    
T  31549352 cacacacttttctcatttatatttacattggacc 31549319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 23 - 56
Target Start/End: Complemental strand, 47110610 - 47110577
Alignment:
Q  23 cacacacatttctcatttatatttacattggacc 56  Q
    ||||||| ||||||||||||||||||||||||||    
T  47110610 cacacacttttctcatttatatttacattggacc 47110577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 20 - 56
Target Start/End: Original strand, 2334601 - 2334637
Alignment:
Q  20 acacacacacatttctcatttatatttacattggacc 56  Q
    |||| ||||| ||||||||||||||||||||||||||    
T  2334601 acacgcacacttttctcatttatatttacattggacc 2334637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 24 - 56
Target Start/End: Complemental strand, 19368293 - 19368261
Alignment:
Q  24 acacacatttctcatttatatttacattggacc 56  Q
    |||||| ||||||||||||||||||||||||||    
T  19368293 acacacttttctcatttatatttacattggacc 19368261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 172; Significance: 3e-92; HSPs: 2)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 172; E-Value: 3e-92
Query Start/End: Original strand, 194 - 451
Target Start/End: Original strand, 32632 - 32890
Alignment:
Q  194 ccgaaggaacaaaattctgaagggacttattccgaagggacagaaaaaagagggagaagaaaagaatagctcgtcaacacaagctaaatagggagaagag 293  Q
    ||||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||    
T  32632 ccgaagggacaaaattccgaagggactt-ttccgaagggacagaaaaaagagggagaagaaaagaaaagctcgtcaagacaagctaaatagggagaagag 32730  T
Q  294 agaaaagttctttgacaactcaagataacttttggtctgtgaaattgtgagggatgagggctctatttataggtgaggaggttgatg-aagatggaaaat 392  Q
    ||||||||||||||| ||||||| | |||||||||| |||||||||||| || |||||||||||||||||||||||||| ||||||| || | |||||||    
T  32731 agaaaagttctttgataactcaaaagaacttttggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggatgttgatgaaaaaaggaaaat 32830  T
Q  393 tggtttaatggaaatgatgaacaattatggtgaa-tttgaaaaaggaatgttaaagttga 451  Q
    ||||||||||||||||||| |||||||||||||| |||||| |||||||| |||||||||    
T  32831 tggtttaatggaaatgatggacaattatggtgaattttgaagaaggaatgataaagttga 32890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 23 - 56
Target Start/End: Original strand, 32467 - 32500
Alignment:
Q  23 cacacacatttctcatttatatttacattggacc 56  Q
    ||||||| ||||||||||||||||||||||||||    
T  32467 cacacacttttctcatttatatttacattggacc 32500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0301 (Bit Score: 154; Significance: 2e-81; HSPs: 1)
Name: scaffold0301
Description:

Target: scaffold0301; HSP #1
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 222 - 449
Target Start/End: Complemental strand, 9537 - 9308
Alignment:
Q  222 attccgaagggacagaaaaaagagggagaagaaaagaatagctcgtcaacacaagctaaatagggagaagagagaaaagttctttgacaactcaagataa 321  Q
    ||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  9537 attccgaagggacagcaaaaagagggagaagaaaagaatagctcttcaacacaagctaaatagggagaagagagaaaagttctttgacaactcaagagaa 9438  T
Q  322 cttttggtctgtgaaattgtgagggatgagggctctatttataggtgaggaggttgatg-aagatggaaaattggtttaatggaaatgatgaacaattat 420  Q
    ||||| || ||| |||||||| |  || || |||||||||||||||||| || |||||| || |||||||||||||||||||||||||||| ||||||||    
T  9437 cttttagtgtgtcaaattgtgtgaaatcagagctctatttataggtgagcagattgatgaaaaatggaaaattggtttaatggaaatgatggacaattat 9338  T
Q  421 ggtgaa-tttgaaaaaggaatgttaaagtt 449  Q
    |||||| |||||||||||||||||||||||    
T  9337 ggtgaattttgaaaaaggaatgttaaagtt 9308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 153; Significance: 7e-81; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 153; E-Value: 7e-81
Query Start/End: Original strand, 222 - 451
Target Start/End: Complemental strand, 66442 - 66210
Alignment:
Q  222 attccgaagggacagaaaaaagagggagaagaaaagaatagctcgtcaacacaagctaaatagggagaagagagaaaagttctttgacaactcaagataa 321  Q
    |||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||| |||||||||||||||||||||| ||    
T  66442 attctgaagggacagaaaaaagagggagaagaaaagaataactcgtcaacacaagctaaagagggagaagagaggaaagttctttgacaactcaagagaa 66343  T
Q  322 cttttggtctgtgaaattgtgagggatgagggctctatttataggtgag-gaggttgatgaaga-tggaaaattggtttaatggaaatgatgaacaatta 419  Q
    |||||||| | |||||||||| || ||||||||||||||||||||||||  ||||||||||| | |||||||||| |||||||||||||||| |||||||    
T  66342 cttttggtgtctgaaattgtgtggaatgagggctctatttataggtgagaaaggttgatgaaaattggaaaattgatttaatggaaatgatggacaatta 66243  T
Q  420 tggtga-atttgaaaaaggaatgttaaagttga 451  Q
    ||||||  |||||||||||||||||||||||||    
T  66242 tggtgatttttgaaaaaggaatgttaaagttga 66210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 153; Significance: 7e-81; HSPs: 2)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 153; E-Value: 7e-81
Query Start/End: Original strand, 225 - 451
Target Start/End: Complemental strand, 24217 - 23989
Alignment:
Q  225 ccgaagggacagaaaaaagagggagaagaaaagaatagctcgtcaacacaagctaaatagggagaagagagaaaagttctttgacaactcaagataactt 324  Q
    ||||||||||||||||| |||||||||||||| |||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||    
T  24217 ccgaagggacagaaaaatgagggagaagaaaaaaatagctcatcaacacaagctaaagagggagaagagagaaaagttctttgacaactcaagagaactt 24118  T
Q  325 ttggtctgtgaaattgtgagggatgagggctctatttataggtgaggaggttgatg-aagatggaaaattggtttaatggaaatgatgaacaattatggt 423  Q
    ||||| |||||||||||| || |||||||||||||||||||||||||||||||||| || ||| |||||| |||||||| |||||||| ||||||||| |    
T  24117 ttggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaatgaaaaatttgtttaatgaaaatgatggacaattatgat 24018  T
Q  424 gaa-tttgaaaaaggaatgttaaagttga 451  Q
    ||| |||||||||| ||||||||||||||    
T  24017 gaattttgaaaaagaaatgttaaagttga 23989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 23 - 56
Target Start/End: Complemental strand, 24387 - 24354
Alignment:
Q  23 cacacacatttctcatttatatttacattggacc 56  Q
    ||||||| ||||||||||||||||||||||||||    
T  24387 cacacacttttctcatttatatttacattggacc 24354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0351 (Bit Score: 149; Significance: 2e-78; HSPs: 1)
Name: scaffold0351
Description:

Target: scaffold0351; HSP #1
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 192 - 451
Target Start/End: Original strand, 7012 - 7276
Alignment:
Q  192 taccgaaggaacaaaattctgaagggacttattccgaagggacagaaaaaagagggagaag-aaaagaatagctcgtcaacacaagct-aaatagggaga 289  Q
    ||||||||| ||||||||| |||||||||||||||||||||||||||||||||| |||||| |||| || |||||||||||||||||| |||||||||||    
T  7012 taccgaagggacaaaattccgaagggacttattccgaagggacagaaaaaagagagagaagaaaaaaaaaagctcgtcaacacaagctaaaatagggaga 7111  T
Q  290 agagagaaaagttctttgacaactcaagataac-ttttggtctgtgaaattgtgagggatgagggctctatttataggtgaggaggttgatg-aagatgg 387  Q
    |||||||||||| |||||||||||||||| ||| ||||||| |||||||||||| || |||||| |||||||||||||||||||  |||||| || |  |    
T  7112 agagagaaaagtgctttgacaactcaagagaactttttggtttgtgaaattgtgtggaatgaggactctatttataggtgaggatcttgatgaaaaaaag 7211  T
Q  388 aaaattggtttaatggaaatgatgaacaattatggtgaa-tttgaaaaaggaatgttaaagttga 451  Q
    ||||||| |||||||||||||||| |||||||||||||| |||||||||||||| ||||||||||    
T  7212 aaaattgatttaatggaaatgatggacaattatggtgaattttgaaaaaggaatattaaagttga 7276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 143; Significance: 6e-75; HSPs: 2)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 143; E-Value: 6e-75
Query Start/End: Original strand, 212 - 382
Target Start/End: Original strand, 805 - 975
Alignment:
Q  212 gaagggacttattccgaagggacagaaaaaagagggagaagaaaagaatagctcgtcaacacaagctaaatagggagaagagagaaaagttctttgacaa 311  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||| |||||||||||||||||||    
T  805 gaagggacttattccgaagggacagaaaaaagagggagaagaaaggaatagctcgtcaacacaagctaaagagggagaagcgagaaaagttctttgacaa 904  T
Q  312 ctcaagataacttttggtctgtgaaattgtgagggatgagggctctatttataggtgaggaggttgatgaa 382  Q
    ||||||| |||||||||| |||||||||||| || ||||||||||||||||||||||||||||||||||||    
T  905 ctcaagagaacttttggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaa 975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 23 - 56
Target Start/End: Original strand, 618 - 651
Alignment:
Q  23 cacacacatttctcatttatatttacattggacc 56  Q
    ||||||| ||||||||||||||||||||||||||    
T  618 cacacacctttctcatttatatttacattggacc 651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 134; Significance: 1e-69; HSPs: 2)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 212 - 451
Target Start/End: Complemental strand, 16294 - 16050
Alignment:
Q  212 gaagggacttattccgaagggacagaa--aaaagagggagaagaaaagaatagctcgtcaacacaagctaaatagggagaagagagaaaagttctttgac 309  Q
    |||||||||||||||||||||||||||  |||| |   | || ||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||    
T  16294 gaagggacttattccgaagggacagaagaaaaaaaaaaaaaaaaaaagaatagctcgttaacacaaactaaatagggagaagagagaaaagttctttgac 16195  T
Q  310 aactcaagataac-ttttggtctgtgaaattgtgagggatgagggctctatttataggtgaggaggttgatg-aagatggaaaattggtttaatggaaat 407  Q
    ||||||||| ||| ||||||| ||| |||||||| || |||||||||||||||| ||||||||||||||||| || ||||||||||||||||||| ||||    
T  16194 aactcaagagaactttttggtgtgtcaaattgtgtggaatgagggctctatttacaggtgaggaggttgatgaaaaatggaaaattggtttaatgaaaat 16095  T
Q  408 gatgaacaattatggtgaa-tttgaaaaaggaatgttaaagttga 451  Q
    || | ||||||||| |||| |||||||||||||||||||||||||    
T  16094 gaaggacaattatgatgaattttgaaaaaggaatgttaaagttga 16050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 23 - 56
Target Start/End: Complemental strand, 16481 - 16448
Alignment:
Q  23 cacacacatttctcatttatatttacattggacc 56  Q
    ||||||| ||||||||||||||||||||||||||    
T  16481 cacacacttttctcatttatatttacattggacc 16448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 126; Significance: 8e-65; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 126; E-Value: 8e-65
Query Start/End: Original strand, 195 - 399
Target Start/End: Original strand, 33129 - 33332
Alignment:
Q  195 cgaaggaacaaaattctgaagggacttattccgaagggacagaaaaaagagggagaagaaaagaatagctcgtcaacacaagctaaat-agggagaagag 293  Q
    |||||| |||||||||  ||| ||||| ||||||||||| ||||||| ||||| ||||||||||||| || ||||||||||||||||| |||||||||||    
T  33129 cgaagggacaaaattccaaagtgactt-ttccgaagggatagaaaaa-gagggggaagaaaagaataacttgtcaacacaagctaaatgagggagaagag 33226  T
Q  294 agaaaagttctttgacaactcaagataacttttggtctgtgaaattgtgagggatgagggctctatttataggtgaggaggttgatgaagatggaaaatt 393  Q
    ||||||||||||||||||||||||| |||||||||| |||||||||||| || |||||||||||||||||||||||||||||||||||| |||||||| |    
T  33227 agaaaagttctttgacaactcaagagaacttttggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaatggaaaagt 33326  T
Q  394 ggttta 399  Q
    ||||||    
T  33327 ggttta 33332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 114; Significance: 1e-57; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 195 - 451
Target Start/End: Original strand, 43644 - 43903
Alignment:
Q  195 cgaaggaacaaaatt-ctgaagggacttattccgaagggacagaaaaaagagggagaagaaaa-gaatagctcgtcaacacaagctaaat-agggagaag 291  Q
    |||||| |||||||| | |||||||||| ||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||| |||||||||    
T  43644 cgaagggacaaaattaccgaagggactt-ttccgaagggacagaaaaaagagggagaaaaaaaagaatagctcgtcaacacaagctaaatgagggagaag 43742  T
Q  292 agagaaaagttctttgacaactcaagataacttttggtctgtgaaattgtgagggatgagggctctatttatag-gtgaggaggttgatgaagatggaaa 390  Q
    ||||||||||||||||||||||||||| ||||||| |  ||| ||||| ||||||||||||||||||||||||| |  |   |||||||||| |||| ||    
T  43743 agagaaaagttctttgacaactcaagagaactttttg-gtgttaaattatgagggatgagggctctatttatagtgcaaaatggttgatgaaaatggtaa 43841  T
Q  391 attggtttaatggaaatgatgaacaattatggtgaa-tttgaaaaaggaatgttaaagttga 451  Q
    |   ||||||||||||||||| ||||| | | |||| ||| |||||||||||||||||||||    
T  43842 accagtttaatggaaatgatggacaatcacgatgaattttaaaaaaggaatgttaaagttga 43903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 113; Significance: 5e-57; HSPs: 1)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 297 - 451
Target Start/End: Original strand, 86201 - 86357
Alignment:
Q  297 aaagttctttgacaactcaagataacttttggtctgtgaaattgtgagggatgagggctctatttataggtgaggaggttgatgaag-atggaaaattgg 395  Q
    |||||||||||||||||||||| |||||||||| |||||||||||| || ||||| ||||||||||||||||||||||||||||||| | ||||||||||    
T  86201 aaagttctttgacaactcaagagaacttttggtgtgtgaaattgtgtggaatgagagctctatttataggtgaggaggttgatgaagaaaggaaaattgg 86300  T
Q  396 tttaatggaaatgatgaacaattatggtgaa-tttgaaaaaggaatgttaaagttga 451  Q
    |||||||||||||||| |||||||||||||| |||||||||||||||||||||||||    
T  86301 tttaatggaaatgatggacaattatggtgaattttgaaaaaggaatgttaaagttga 86357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085 (Bit Score: 105; Significance: 3e-52; HSPs: 2)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 222 - 342
Target Start/End: Original strand, 18179 - 18299
Alignment:
Q  222 attccgaagggacagaaaaaagagggagaagaaaagaatagctcgtcaacacaagctaaatagggagaagagagaaaagttctttgacaactcaagataa 321  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||| ||    
T  18179 attccgaagggacagaaaaaagagggagaagaaaagaatagcttgtcaacacaagctaaagagggagaagagagaaaagttctttgacaactcaagagaa 18278  T
Q  322 cttttggtctgtgaaattgtg 342  Q
    |||||||| ||||||||||||    
T  18279 cttttggtgtgtgaaattgtg 18299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085; HSP #2
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 322 - 451
Target Start/End: Original strand, 7323 - 7454
Alignment:
Q  322 cttttggtctgtgaaattgtgagggatgagggctctatttataggtgaggaggttgatg-aagatggaaaattggtttaatggaaatgatgaacaattat 420  Q
    |||||||| |||||||||||| || |||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||| ||||||||    
T  7323 cttttggtgtgtgaaattgtgtggaatgagggctctatttataggtgaggaggttgatgaaaaatggaaaattggtttaatggaaatgatggacaattat 7422  T
Q  421 ggtgaa-tttgaaaaaggaatgttaaagttga 451  Q
    |||||| |||||||||||||||||||||||||    
T  7423 ggtgaattttgaaaaaggaatgttaaagttga 7454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0226 (Bit Score: 86; Significance: 6e-41; HSPs: 1)
Name: scaffold0226
Description:

Target: scaffold0226; HSP #1
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 224 - 404
Target Start/End: Complemental strand, 5859 - 5679
Alignment:
Q  224 tccgaagggacagaaaaaagagggagaagaaaagaatagctcgtcaacacaagctaaat-agggagaagagagaaaagttctttgacaactcaagataac 322  Q
    |||||||||||  ||||||||||||||| |||||||||||||||||||||||||| ||  |||||||||||||||||||||||||||||||||||| |||    
T  5859 tccgaagggact-aaaaaagagggagaaaaaaagaatagctcgtcaacacaagctgaaggagggagaagagagaaaagttctttgacaactcaagaaaac 5761  T
Q  323 ttttggtctgtgaaattgtgagggatgagggctctatttataggtgaggaggttgatgaagatggaaaattggtttaatgga 404  Q
    |||| || |||| |   |||||| |||||  || |||||||||||    ||||||||||| |||||||||||||||||||||    
T  5760 tttttgtgtgtgtataagtgaggaatgagaactttatttataggttcaaaggttgatgaaaatggaaaattggtttaatgga 5679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 70; Significance: 2e-31; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 224 - 328
Target Start/End: Complemental strand, 171311 - 171207
Alignment:
Q  224 tccgaagggacagaaaaaagagggagaagaaaagaatagctcgtcaacacaagctaaat-agggagaagagagaaaagttctttgacaactcaagataac 322  Q
    |||||| ||||||||||| |||||||| ||||||||||||||||||||| | ||||||  ||||||||||||||||||||||||||||||||||||||||    
T  171311 tccgaaaggacagaaaaa-gagggagaggaaaagaatagctcgtcaacatatgctaaaggagggagaagagagaaaagttctttgacaactcaagataac 171213  T
Q  323 ttttgg 328  Q
    ||||||    
T  171212 ttttgg 171207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 70; Significance: 2e-31; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 224 - 404
Target Start/End: Complemental strand, 163984 - 163804
Alignment:
Q  224 tccgaagggacagaaaaaagagggagaagaaaagaatagctcgtcaacacaagctaaat-agggagaagagagaaaagttctttgacaactcaagataac 322  Q
    ||||| || |||||||||| ||||||| ||||||||||||| ||||||||||||||||  |||||||||||||||||||| |||||||||| |||| |||    
T  163984 tccgacggaacagaaaaaa-agggagaggaaaagaatagctagtcaacacaagctaaaggagggagaagagagaaaagttttttgacaacttaagagaac 163886  T
Q  323 ttttggtctgtgaaattgtgagggatgagggctctatttataggtgaggaggttgatgaagatggaaaattggtttaatgga 404  Q
    ||||||| | || |   |||||| ||||| ||||||||||||| |    ||||||||||| |||||||| || |||||||||    
T  163885 ttttggtgtttgtataagtgaggaatgagagctctatttatagattcaaaggttgatgaaaatggaaaactgatttaatgga 163804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 224 - 307
Target Start/End: Complemental strand, 148804 - 148721
Alignment:
Q  224 tccgaagggacagaaaaaagagggagaagaaaagaatagctcgtcaacacaagctaaat-agggagaagagagaaaagttctttg 307  Q
    ||||| |||||||||||| |||| ||| ||||||||||| | ||||||| | ||||||  ||||||| |||||||||||||||||    
T  148804 tccgacgggacagaaaaa-gaggtagaggaaaagaatagtttgtcaacatatgctaaaggagggagatgagagaaaagttctttg 148721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0555 (Bit Score: 64; Significance: 8e-28; HSPs: 1)
Name: scaffold0555
Description:

Target: scaffold0555; HSP #1
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 224 - 404
Target Start/End: Original strand, 4775 - 4952
Alignment:
Q  224 tccgaagggacagaaaaaagagggagaagaaaagaatagctcgtcaacacaagctaaat-agggagaagagagaaaagttctttgacaactcaagataac 322  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||| ||||| ||||||||||| ||||||   |||||  || |||    
T  4775 tccgaagggaca-aaaaaagagggagaagaaaagaatagctcgtcaacataagctaaatgagggaaaagagagaaaaattcttt---aactc--gagaac 4868  T
Q  323 ttttg--gtctgtgaaattgtgagggatgagggctctatttataggtgaggaggttgatgaagatggaaaattggtttaatgga 404  Q
    |||||  || |||| |   |||||| ||||| |||||||||||||||    ||||||||||| |||||||| ||||||||||||    
T  4869 ttttggtgtgtgtgtataagtgaggaatgagagctctatttataggttcaaaggttgatgaaaatggaaaactggtttaatgga 4952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 64; Significance: 8e-28; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 212 - 299
Target Start/End: Complemental strand, 14462 - 14375
Alignment:
Q  212 gaagggacttattccgaagggacagaaaaaagagggagaagaaaagaatagctcgtcaacacaagctaaatagggagaagagagaaaa 299  Q
    |||||||||||||||||| |||||||||||| |  ||||||||||||||||||||| |||||||| ||||||||||||||||||||||    
T  14462 gaagggacttattccgaaaggacagaaaaaaaaaagagaagaaaagaatagctcgttaacacaagttaaatagggagaagagagaaaa 14375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0586 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0586
Description:

Target: scaffold0586; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 239 - 329
Target Start/End: Original strand, 5182 - 5272
Alignment:
Q  239 aaaagagggagaagaaaagaatagctcgtcaacacaagctaaatagggagaagagagaaaagttctttgacaactcaagataacttttggt 329  Q
    |||||||||||||||||| ||||| |||||||||| ||||| |  |||||||||||||| |||||||||||||||||| | ||||||||||    
T  5182 aaaagagggagaagaaaataatagttcgtcaacacgagctatagggggagaagagagaatagttctttgacaactcaatagaacttttggt 5272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0970 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0970
Description:

Target: scaffold0970; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 23 - 56
Target Start/End: Complemental strand, 53 - 20
Alignment:
Q  23 cacacacatttctcatttatatttacattggacc 56  Q
    ||||||| ||||||||||||||||||||||||||    
T  53 cacacacctttctcatttatatttacattggacc 20  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University