View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20435_low_38 (Length: 309)
Name: NF20435_low_38
Description: NF20435
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20435_low_38 |
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Alignment Details
Target: chr2 (Bit Score: 271; Significance: 1e-151; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 271; E-Value: 1e-151
Query Start/End: Original strand, 15 - 293
Target Start/End: Original strand, 18588036 - 18588314
Alignment:
| Q |
15 |
tgcagatgaagatggttgtagtgatgatccttgtgattaccgtggtgaatataatgatacaaaatgcgttagcaattgtggcaaaccctcacaaagatgg |
114 |
Q |
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| T |
18588036 |
tgcagatgaagatggttgtagtgatgatccttgtgattaccgtggtgaatataatgatacaaaatgtgttagcaattgtggcaaaccctcacaaagatgg |
18588135 |
T |
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| Q |
115 |
ttagttaacatgctcaattaattactattttaattcaagattataataataatatgaaatgtgtgacaattaaaatatttatgttactttgaataattta |
214 |
Q |
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| T |
18588136 |
ttagttaacatgctcaattaattactattttaattcaagattataataataatatgaaatgtgtgacaattaaaatatatatgttactttgaataattta |
18588235 |
T |
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| Q |
215 |
ggtaccatgtccctcgtgactttattgaagatggtgtgaacacattggttttgtttgaggaaattggtggtaacccttc |
293 |
Q |
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| T |
18588236 |
ggtaccatgtccctcgtgactttattgaagatggtgtgaacacattggttttgtttgaggaaattggtggtaacccttc |
18588314 |
T |
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