View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20435_low_6 (Length: 594)

Name: NF20435_low_6
Description: NF20435
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20435_low_6
NF20435_low_6
[»] chr6 (22 HSPs)
chr6 (18-396)||(9177660-9178039)
chr6 (18-336)||(9149025-9149344)
chr6 (394-496)||(19237558-19237660)
chr6 (406-496)||(10792506-10792596)
chr6 (394-487)||(10793543-10793636)
chr6 (221-389)||(26660535-26660711)
chr6 (221-389)||(26766506-26766682)
chr6 (406-496)||(7001728-7001818)
chr6 (395-495)||(17280655-17280755)
chr6 (27-105)||(9153698-9153776)
chr6 (27-105)||(9174929-9175007)
chr6 (402-495)||(17279903-17279996)
chr6 (394-496)||(8238080-8238182)
chr6 (31-219)||(9182606-9182788)
chr6 (394-496)||(5860561-5860662)
chr6 (404-488)||(8238833-8238917)
chr6 (394-441)||(8683866-8683913)
chr6 (398-476)||(29375018-29375096)
chr6 (406-450)||(25359522-25359566)
chr6 (27-69)||(9151053-9151095)
chr6 (100-153)||(29957927-29957980)
chr6 (65-132)||(20368147-20368217)
[»] chr2 (14 HSPs)
chr2 (394-502)||(29558163-29558270)
chr2 (394-498)||(9244255-9244359)
chr2 (240-390)||(17988925-17989083)
chr2 (394-474)||(18767546-18767626)
chr2 (241-386)||(5430226-5430379)
chr2 (410-468)||(16591509-16591567)
chr2 (299-390)||(37794656-37794747)
chr2 (406-487)||(45631103-45631184)
chr2 (301-375)||(19263821-19263895)
chr2 (298-359)||(35016327-35016388)
chr2 (394-460)||(5483905-5483971)
chr2 (62-151)||(1741996-1742088)
chr2 (113-146)||(29419880-29419913)
chr2 (406-450)||(9244017-9244061)
[»] chr4 (33 HSPs)
chr4 (394-495)||(20627538-20627639)
chr4 (394-495)||(31914534-31914635)
chr4 (394-490)||(34978355-34978451)
chr4 (301-389)||(55606253-55606341)
chr4 (394-496)||(31135181-31135283)
chr4 (394-496)||(34836761-34836863)
chr4 (406-487)||(11791384-11791465)
chr4 (394-501)||(12206775-12206883)
chr4 (394-501)||(31689188-31689296)
chr4 (394-501)||(12210868-12210975)
chr4 (394-477)||(23089244-23089327)
chr4 (394-496)||(20628294-20628395)
chr4 (394-496)||(34837926-34838028)
chr4 (407-487)||(11792282-11792362)
chr4 (395-495)||(42523214-42523314)
chr4 (394-477)||(23088287-23088370)
chr4 (394-477)||(54501616-54501699)
chr4 (301-390)||(38411875-38411964)
chr4 (298-386)||(13198084-13198172)
chr4 (298-390)||(25968073-25968165)
chr4 (394-450)||(41164169-41164225)
chr4 (410-455)||(31135894-31135939)
chr4 (394-443)||(48314378-48314427)
chr4 (298-386)||(28147060-28147148)
chr4 (394-429)||(31908375-31908410)
chr4 (224-277)||(11440762-11440815)
chr4 (100-140)||(6466051-6466091)
chr4 (406-450)||(12921863-12921907)
chr4 (394-450)||(42523886-42523942)
chr4 (298-364)||(11440664-11440733)
chr4 (394-443)||(48315193-48315242)
chr4 (406-450)||(12921152-12921196)
chr4 (81-145)||(35064875-35064939)
[»] chr3 (18 HSPs)
chr3 (394-501)||(54285765-54285872)
chr3 (394-498)||(4300944-4301048)
chr3 (396-501)||(17615035-17615140)
chr3 (394-501)||(17619094-17619201)
chr3 (394-496)||(40929811-40929914)
chr3 (394-501)||(29032755-29032861)
chr3 (301-390)||(11783413-11783502)
chr3 (394-495)||(28422801-28422902)
chr3 (394-445)||(27359841-27359892)
chr3 (304-376)||(7299195-7299267)
chr3 (394-476)||(51341885-51341967)
chr3 (421-482)||(1602477-1602538)
chr3 (394-476)||(40177738-40177816)
chr3 (406-481)||(33148269-33148344)
chr3 (394-443)||(27317483-27317532)
chr3 (406-459)||(14460125-14460178)
chr3 (406-450)||(2841207-2841251)
chr3 (110-146)||(49465951-49465987)
[»] chr5 (11 HSPs)
chr5 (394-482)||(33471176-33471264)
chr5 (299-390)||(41283564-41283655)
chr5 (296-395)||(36491555-36491654)
chr5 (395-476)||(22671618-22671699)
chr5 (302-390)||(22927072-22927160)
chr5 (298-389)||(39426094-39426183)
chr5 (299-386)||(13424644-13424727)
chr5 (394-476)||(23989580-23989658)
chr5 (406-459)||(33471845-33471898)
chr5 (420-476)||(23995041-23995097)
chr5 (352-390)||(19967574-19967612)
[»] chr8 (17 HSPs)
chr8 (394-501)||(16105974-16106081)
chr8 (394-501)||(16113214-16113321)
chr8 (399-490)||(1636864-1636955)
chr8 (394-501)||(16101534-16101641)
chr8 (394-473)||(30971984-30972063)
chr8 (221-366)||(13402180-13402319)
chr8 (394-460)||(30971296-30971362)
chr8 (394-490)||(5152414-5152510)
chr8 (298-366)||(13396882-13396950)
chr8 (394-496)||(28965786-28965888)
chr8 (402-451)||(32744029-32744078)
chr8 (298-390)||(23489973-23490065)
chr8 (394-429)||(42757617-42757652)
chr8 (221-275)||(7154183-7154237)
chr8 (406-459)||(1637564-1637617)
chr8 (400-433)||(28966536-28966569)
chr8 (299-331)||(14370816-14370848)
[»] chr1 (23 HSPs)
chr1 (406-496)||(34269039-34269129)
chr1 (394-487)||(34267987-34268080)
chr1 (406-474)||(34275296-34275364)
chr1 (298-390)||(12990588-12990680)
chr1 (394-490)||(17239367-17239463)
chr1 (235-364)||(9457714-9457851)
chr1 (235-364)||(9461811-9461948)
chr1 (394-501)||(42026907-42027013)
chr1 (394-501)||(42031644-42031750)
chr1 (296-390)||(34664852-34664946)
chr1 (394-490)||(17238608-17238704)
chr1 (406-487)||(24790814-24790895)
chr1 (394-476)||(16801984-16802066)
chr1 (394-476)||(16802657-16802739)
chr1 (398-489)||(34361225-34361315)
chr1 (298-364)||(32617574-32617640)
chr1 (100-151)||(35925704-35925755)
chr1 (63-138)||(6262047-6262125)
chr1 (113-150)||(33976701-33976738)
chr1 (398-451)||(47722009-47722062)
chr1 (398-451)||(47729001-47729054)
chr1 (104-136)||(3244928-3244960)
chr1 (300-375)||(14081717-14081790)
[»] chr7 (20 HSPs)
chr7 (298-390)||(25635907-25635999)
chr7 (298-390)||(39653460-39653552)
chr7 (394-496)||(45551760-45551862)
chr7 (394-495)||(5995264-5995365)
chr7 (394-475)||(41970899-41970980)
chr7 (394-495)||(45551009-45551110)
chr7 (298-364)||(10493373-10493439)
chr7 (398-475)||(27268218-27268295)
chr7 (394-451)||(5997611-5997668)
chr7 (296-369)||(7493065-7493138)
chr7 (398-474)||(27258084-27258161)
chr7 (299-390)||(47363708-47363799)
chr7 (415-487)||(7834905-7834977)
chr7 (394-450)||(1409387-1409443)
chr7 (298-383)||(45435503-45435590)
chr7 (394-441)||(28778109-28778156)
chr7 (100-152)||(28165104-28165156)
chr7 (299-390)||(33049200-33049291)
chr7 (300-381)||(31742971-31743053)
chr7 (63-146)||(2825201-2825282)
[»] scaffold0015 (1 HSPs)
scaffold0015 (394-446)||(45344-45396)


Alignment Details
Target: chr6 (Bit Score: 316; Significance: 1e-178; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 316; E-Value: 1e-178
Query Start/End: Original strand, 18 - 396
Target Start/End: Complemental strand, 9178039 - 9177660
Alignment:
Q  18 ctgttcaactgacttatttgagtttatatattagcataaatactatgagactatttggaagatcttatgagaacaacttacttgttcataatctattttc 117  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  9178039 ctgttcaactgacttatttgagtttatatattagcataaacactatgagactatttggaagatcttatgagaacaacttacttgttcataatctgttttc 9177940  T
Q  118 aacttatttccataaactctctatgataggttataggttatgaaaacaacttagagtttaatagaaaagaatttgacttta-tttatgttttgttatcga 216  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  9177939 aacttatttccataaactctctatgataggttataggttatgaaaacaacttagagtttaatagaaaagaatttgactttattttatgttttgttatcga 9177840  T
Q  217 aattaaggttttaaataacggtcacggtcgcgtataagatttcacgatttcggctgttacgggtgctggatacagattgcacggtgtgaattaatcacaa 316  Q
    ||||||| ||||||||||| ||| |||||||||||| ||||||||  |||||||||||||||||| ||||||| |||||| |||||||||||||||||||    
T  9177839 aattaagattttaaataacagtcgcggtcgcgtataggatttcacagtttcggctgttacgggtgttggatactgattgcgcggtgtgaattaatcacaa 9177740  T
Q  317 tattgcacaactcttgaataatgatggtaacgtaaataacttaaactaaagataaatttggagttctaaactaggtgaga 396  Q
     |||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  9177739 cattgcacaactcttgaataatgatagtaacgtaaataacttaaactaaagatagatttggagttctaaactaggtgaga 9177660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 268; E-Value: 1e-149
Query Start/End: Original strand, 18 - 336
Target Start/End: Original strand, 9149025 - 9149344
Alignment:
Q  18 ctgttcaactgacttatttgagtttatatattagcataaatactatgagactatttggaagatcttatgagaacaacttacttgttcataatctattttc 117  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  9149025 ctgttcaactgacttatttgagtttatatattagcataaacactatgagactatttggaagatcttatgagaacaacttacttgttcataatctgttttc 9149124  T
Q  118 aacttatttccataaactctctatgataggttataggttatgaaaacaacttagagtttaatagaaaagaatttgacttta-tttatgttttgttatcga 216  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  9149125 aacttatttccataaactctctatgataggttataggttatgaaaacaacttagagtttaatagaaaagaatttgactttattttatgttttgttatcga 9149224  T
Q  217 aattaaggttttaaataacggtcacggtcgcgtataagatttcacgatttcggctgttacgggtgctggatacagattgcacggtgtgaattaatcacaa 316  Q
    ||||||||||||||||||| | | |||||||||||| |||||||||||||||||| ||||||||| ||||||| |||||| | |||||||||||||||||    
T  9149225 aattaaggttttaaataacagccgcggtcgcgtataggatttcacgatttcggctattacgggtgttggataccgattgcgcagtgtgaattaatcacaa 9149324  T
Q  317 tattgcacaactcttgaata 336  Q
    ||||||||||||||||||||    
T  9149325 tattgcacaactcttgaata 9149344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 394 - 496
Target Start/End: Complemental strand, 19237660 - 19237558
Alignment:
Q  394 agacccactcatttttatgaaggtctattttagcaaccaacaccttttcacttggacacaaagacccttgtttttattttttgggaaaattaaaactgaa 493  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||| |||  |||||| ||    
T  19237660 agacccactcattttcatgaaggtctattttagcaaccaacaccttttcacttggacataaagacccttgtttttgttttttggggaaaccaaaactaaa 19237561  T
Q  494 ggg 496  Q
    |||    
T  19237560 ggg 19237558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 406 - 496
Target Start/End: Original strand, 10792506 - 10792596
Alignment:
Q  406 ttttatgaaggtctattttagcaaccaacaccttttcacttggacacaaagacccttgtttttattttttgggaaaattaaaactgaaggg 496  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||  |||||||| | ||||||    
T  10792506 ttttatgaaggtctattttagcaagcaacaccttttcatttggacacaaagacccttgtttttattttttggacaaattaaatcagaaggg 10792596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 394 - 487
Target Start/End: Complemental strand, 10793636 - 10793543
Alignment:
Q  394 agacccactcatttttatgaaggtctattttagcaaccaacaccttttcacttggacacaaagacccttgtttttattttttgggaaaattaaa 487  Q
    ||||||||||  |||||| ||||||||||||||||| ||||||||||||||||||||||||| ||||||| |||||||||||||| ||||||||    
T  10793636 agacccactccattttatcaaggtctattttagcaagcaacaccttttcacttggacacaaaaacccttgcttttattttttgggcaaattaaa 10793543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 221 - 389
Target Start/End: Original strand, 26660535 - 26660711
Alignment:
Q  221 aaggttttaaataacggtcacggtcgcgtataagatttcacgatttcggctgttacgggtgctg-gatacagattgc-------acggtgtgaattaatc 312  Q
    ||||||||||||||||||  |||||| ||||| |||||||| |||||||| |||||| ||| || |||||  |||||       ||||||||||||||||    
T  26660535 aaggttttaaataacggttgcggtcgagtataggatttcacaatttcggccgttacgagtgttgcgatacgaattgcggttgtcacggtgtgaattaatc 26660634  T
Q  313 acaatattgcacaactcttgaataatgatggtaacgtaaataacttaaactaaagataaatttggagttctaaacta 389  Q
    |||| |||||||||||||| ||| |  || ||||| ||||||| |||||||||||| | ||||||||||||||||||    
T  26660635 acaacattgcacaactcttaaatcacaatagtaacttaaataatttaaactaaagaaagatttggagttctaaacta 26660711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 221 - 389
Target Start/End: Original strand, 26766506 - 26766682
Alignment:
Q  221 aaggttttaaataacggtcacggtcgcgtataagatttcacgatttcggctgttacgggtgctg-gatacagattgc-------acggtgtgaattaatc 312  Q
    ||||||||||||||||||  |||||| ||||| |||||||| |||||||| |||||| ||| || |||||  |||||       ||||||||||||||||    
T  26766506 aaggttttaaataacggttgcggtcgagtataggatttcacaatttcggccgttacgagtgttgcgatacgaattgcggttgtcacggtgtgaattaatc 26766605  T
Q  313 acaatattgcacaactcttgaataatgatggtaacgtaaataacttaaactaaagataaatttggagttctaaacta 389  Q
    |||| |||||||||||||| ||| |  || ||||| ||||||| |||||||||||| | ||||||||||||||||||    
T  26766606 acaacattgcacaactcttaaatcacaatagtaacttaaataatttaaactaaagaaagatttggagttctaaacta 26766682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 406 - 496
Target Start/End: Complemental strand, 7001818 - 7001728
Alignment:
Q  406 ttttatgaaggtctattttagcaaccaacaccttttcacttggacacaaagacccttgtttttattttttgggaaaattaaaactgaaggg 496  Q
    |||||||||||||||||||||||  |||||||||||||||||||||||| ||||||||||||| ||||||||  |||||||| || |||||    
T  7001818 ttttatgaaggtctattttagcatgcaacaccttttcacttggacacaatgacccttgtttttgttttttggacaaattaaatctaaaggg 7001728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 395 - 495
Target Start/End: Complemental strand, 17280755 - 17280655
Alignment:
Q  395 gacccactcatttttatgaaggtctattttagcaaccaacaccttttcacttggacacaaagacccttgtttttattttttgggaaaattaaaactgaag 494  Q
    |||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||  ||| | ||||| ||||||| ||||| ||| ||| |||    
T  17280755 gacccactcattttcattaaggtctattttagcaaccaacaccttttcacttggacacaaatgcccatatttttgttttttgagaaaactaatactaaag 17280656  T
Q  495 g 495  Q
    |    
T  17280655 g 17280655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 27 - 105
Target Start/End: Original strand, 9153698 - 9153776
Alignment:
Q  27 tgacttatttgagtttatatattagcataaatactatgagactatttggaagatcttatgagaacaacttacttgttca 105  Q
    |||||||| |||||||||||||||||||||| ||||||||||| | ||||||||||||||| |||||||||| ||||||    
T  9153698 tgacttatatgagtttatatattagcataaacactatgagactgtatggaagatcttatgaaaacaacttacatgttca 9153776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 27 - 105
Target Start/End: Complemental strand, 9175007 - 9174929
Alignment:
Q  27 tgacttatttgagtttatatattagcataaatactatgagactatttggaagatcttatgagaacaacttacttgttca 105  Q
    |||||||| |||||||||||||||||||||| ||||||||||| | ||||||||||||||| |||||||||| ||||||    
T  9175007 tgacttatatgagtttatatattagcataaacactatgagactgtatggaagatcttatgaaaacaacttacatgttca 9174929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 402 - 495
Target Start/End: Original strand, 17279903 - 17279996
Alignment:
Q  402 tcatttttatgaaggtctattttagcaaccaacaccttttcacttggacacaaagacccttgtttttattttttgggaaaattaaaactgaagg 495  Q
    ||||||||||||||||||||||||||||||| |||||||| ||||||||||||| |||| | ||||| ||||||| ||||| ||| ||| ||||    
T  17279903 tcatttttatgaaggtctattttagcaaccagcacctttttacttggacacaaatacccatatttttgttttttgagaaaactaatactaaagg 17279996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 394 - 496
Target Start/End: Original strand, 8238080 - 8238182
Alignment:
Q  394 agacccactcatttttatgaaggtctattttagcaaccaacaccttttcacttggacacaaagacccttgtttttattttttgggaaaattaaaactgaa 493  Q
    |||| |||||||||||||||| ||||||| || ||||||||||||||||| |||||| |||| ||| || ||||| ||||||| | ||||||||||| ||    
T  8238080 agactcactcatttttatgaaagtctattctatcaaccaacaccttttcaattggacccaaaaacctttatttttgttttttgagcaaattaaaactaaa 8238179  T
Q  494 ggg 496  Q
    |||    
T  8238180 ggg 8238182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 31 - 219
Target Start/End: Original strand, 9182606 - 9182788
Alignment:
Q  31 ttatttgagtttatatattagcataaatactatgagactatttggaagatcttatgagaacaacttacttgttcataatctattttcaacttatttccat 130  Q
    |||||| |||||||||| ||||||||   ||| |||||||||| ||||| ||||||| |||||  ||| || ||||||  | ||||| |||||||||       
T  9182606 ttatttcagtttatatactagcataagctctacgagactatttagaagaacttatgaaaacaatgtacatgatcataaattgttttctacttatttctgc 9182705  T
Q  131 aaactctctatgataggttataggttatgaaaacaacttagagtttaatagaaaagaatttgacttta-tttatgttttgttatcgaaat 219  Q
    | |||||| |||||||||||        ||||||||||||||||||| | |||||||| ||||||||| ||||||||||||||| |||||    
T  9182706 agactctccatgataggttac-------gaaaacaacttagagtttatttgaaaagaaattgactttattttatgttttgttatagaaat 9182788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 394 - 496
Target Start/End: Original strand, 5860561 - 5860662
Alignment:
Q  394 agacccactcatttttatgaaggtctattttagcaaccaacaccttttcacttggacacaaagacccttgtttttattttttgggaaaattaaaactgaa 493  Q
    |||||||||||||||||||||||| |||||||||||| ||||| |||||| ||||||| ||| ||| ||  |||| |||||||| |||  ||||||||||    
T  5860561 agacccactcatttttatgaaggtgtattttagcaacaaacacattttcatttggacaaaaaaaccatt-attttgttttttggaaaagctaaaactgaa 5860659  T
Q  494 ggg 496  Q
    |||    
T  5860660 ggg 5860662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 404 - 488
Target Start/End: Complemental strand, 8238917 - 8238833
Alignment:
Q  404 atttttatgaaggtctattttagcaaccaacaccttttcacttggacacaaagacccttgtttttattttttgggaaaattaaaa 488  Q
    |||| ||| ||||| |||||||||||||||||  |||||| ||||||||||| |||||| ||||| ||||||| | |||||||||    
T  8238917 atttatataaaggtttattttagcaaccaacattttttcaattggacacaaaaacccttatttttgttttttgagcaaattaaaa 8238833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 394 - 441
Target Start/End: Complemental strand, 8683913 - 8683866
Alignment:
Q  394 agacccactcatttttatgaaggtctattttagcaaccaacacctttt 441  Q
    ||||||||||||||| |||||||||||||||||||||||||| |||||    
T  8683913 agacccactcattttcatgaaggtctattttagcaaccaacatctttt 8683866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 398 - 476
Target Start/End: Complemental strand, 29375096 - 29375018
Alignment:
Q  398 ccactcatttttatgaaggtctattttagcaaccaacaccttttcacttggacacaaagacccttgtttttattttttg 476  Q
    ||||||||||| ||||||||| ||||||||||  | |||||||||||||||||| ||| | || ||||||| |||||||    
T  29375096 ccactcattttcatgaaggtccattttagcaaggagcaccttttcacttggacaaaaatatccatgtttttgttttttg 29375018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 406 - 450
Target Start/End: Original strand, 25359522 - 25359566
Alignment:
Q  406 ttttatgaaggtctattttagcaaccaacaccttttcacttggac 450  Q
    ||||||||| |||||||||||||||||||||||||| | ||||||    
T  25359522 ttttatgaaagtctattttagcaaccaacacctttttatttggac 25359566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 27 - 69
Target Start/End: Original strand, 9151053 - 9151095
Alignment:
Q  27 tgacttatttgagtttatatattagcataaatactatgagact 69  Q
    ||||||||||||||||||||| || |||||| |||||||||||    
T  9151053 tgacttatttgagtttatatactaccataaacactatgagact 9151095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 100 - 153
Target Start/End: Original strand, 29957927 - 29957980
Alignment:
Q  100 tgttcataatctattttcaacttatttccataaactctctatgataggttatag 153  Q
    ||||||| ||||||||||| ||||||||||||| |||||||  |||| ||||||    
T  29957927 tgttcatgatctattttcagcttatttccataagctctctagaatagcttatag 29957980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 65 - 132
Target Start/End: Original strand, 20368147 - 20368217
Alignment:
Q  65 agactatttggaagatcttatgagaacaactt---acttgttcataatctattttcaacttatttccataa 132  Q
    ||||||||||| ||| ||||||| ||||||||   || ||||||||| ||| ||||||||||||| |||||    
T  20368147 agactatttgggagaacttatgaaaacaacttatgacatgttcataagctagtttcaacttattttcataa 20368217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 77; Significance: 2e-35; HSPs: 14)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 394 - 502
Target Start/End: Original strand, 29558163 - 29558270
Alignment:
Q  394 agacccactcatttttatgaaggtctattttagcaaccaacaccttttcacttggacacaaagacccttgtttttattttttgggaaaattaaaactgaa 493  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||  ||||||||| ||||||||||||||||||| ||||    
T  29558163 agacccactcatttttatgaaggtctattt-agcaaccaacacctttttacttggacacaaagattcttgtttttgttttttgggaaaattaaaattgaa 29558261  T
Q  494 gggtaaaaa 502  Q
    ||| |||||    
T  29558262 ggggaaaaa 29558270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 394 - 498
Target Start/End: Original strand, 9244255 - 9244359
Alignment:
Q  394 agacccactcatttttatgaaggtctattttagcaaccaacaccttttcacttggacacaaagacccttgtttttattttttgggaaaattaaaactgaa 493  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||  || |||||||||||| | |||||| ||||||| || ||||    
T  9244255 agacccactcatttttatgaaggtctattttagcatccaacaccttttcagttggacaataacacccttgtttttttattttggtaaaattataattgaa 9244354  T
Q  494 gggta 498  Q
    |||||    
T  9244355 gggta 9244359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 240 - 390
Target Start/End: Original strand, 17988925 - 17989083
Alignment:
Q  240 acggtcgcgtataagatttcacgatttcggctgttacgggtgctg-gatacagattgcac-------ggtgtgaattaatcacaatattgcacaactctt 331  Q
    ||||||||||| | |||||| | ||||||||||||||||||| || ||||| ||||||         |||||||||||||||||||||||||||||||||    
T  17988925 acggtcgcgtacaggatttcgcaatttcggctgttacgggtgttgcgatacggattgcggttgtcgaggtgtgaattaatcacaatattgcacaactctt 17989024  T
Q  332 gaataatgatggtaacgtaaataacttaaactaaagataaatttggagttctaaactag 390  Q
     ||||||||| ||||| |||||||||||||||| | | | |||||||||||||||||||    
T  17989025 aaataatgatagtaacttaaataacttaaactagaaaaagatttggagttctaaactag 17989083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 394 - 474
Target Start/End: Complemental strand, 18767626 - 18767546
Alignment:
Q  394 agacccactcatttttatgaaggtctattttagcaaccaacaccttttcacttggacacaaagacccttgtttttattttt 474  Q
    |||| ||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||    
T  18767626 agactcactcatttttataaaggtctattttagcaaccaacaccttttcacttagacacaaagacccttgttttgattttt 18767546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 241 - 386
Target Start/End: Complemental strand, 5430379 - 5430226
Alignment:
Q  241 cggtcgcgtataagatttcacgatttcggctgttacgggtgctggat-acagattg-------cacggtgtgaattaatcacaatattgcacaactcttg 332  Q
    |||||||||||| ||||| |||||||||| |||||||| || || || ||||||||       | ||||||||||||||||||||||||||||||||||     
T  5430379 cggtcgcgtatatgattttacgatttcggttgttacggatgttgcattacagattgtggttgtcgcggtgtgaattaatcacaatattgcacaactctta 5430280  T
Q  333 aataatgatggtaacgtaaataacttaaactaaagataaatttggagttctaaa 386  Q
    ||||||||| ||||| |||||||||||||||| ||||| | ||||| |||||||    
T  5430279 aataatgatagtaacataaataacttaaactagagatagagttggatttctaaa 5430226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 410 - 468
Target Start/End: Complemental strand, 16591567 - 16591509
Alignment:
Q  410 atgaaggtctattttagcaaccaacaccttttcacttggacacaaagacccttgttttt 468  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  16591567 atgaaggtctattttagcaaccaacaccttttcacttggacacaaaaacccttgttttt 16591509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 299 - 390
Target Start/End: Original strand, 37794656 - 37794747
Alignment:
Q  299 ggtgtgaattaatcacaatattgcacaactcttgaataatgatggtaacgtaaataacttaaactaaagataaatttggagttctaaactag 390  Q
    |||||||||||||||||| |||||||||||||| ||||||||| ||||| || |||||||| || | ||| | |||||||||||||||||||    
T  37794656 ggtgtgaattaatcacaacattgcacaactcttaaataatgatagtaacttagataacttagaccagagaaagatttggagttctaaactag 37794747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 406 - 487
Target Start/End: Complemental strand, 45631184 - 45631103
Alignment:
Q  406 ttttatgaaggtctattttagcaaccaacaccttttcacttggacacaaagacccttgtttttattttttgggaaaattaaa 487  Q
    |||||||||||||||||||||||| | |||||||| |||||||||| ||| |||||| ||||| ||||||||| ||||||||    
T  45631184 ttttatgaaggtctattttagcaagctacacctttacacttggacataaaaacccttatttttgttttttgggtaaattaaa 45631103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 301 - 375
Target Start/End: Complemental strand, 19263895 - 19263821
Alignment:
Q  301 tgtgaattaatcacaatattgcacaactcttgaataatgatggtaacgtaaataacttaaactaaagataaattt 375  Q
    |||||||||||||||| ||||||||| |||| ||||||||| ||||| ||||||||||| |||| ||||| ||||    
T  19263895 tgtgaattaatcacaacattgcacaattcttaaataatgatagtaacataaataacttatactagagatagattt 19263821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 298 - 359
Target Start/End: Original strand, 35016327 - 35016388
Alignment:
Q  298 cggtgtgaattaatcacaatattgcacaactcttgaataatgatggtaacgtaaataactta 359  Q
    ||||||||||||||||||| ||| |||||||||| ||||||||| ||||| |||||||||||    
T  35016327 cggtgtgaattaatcacaacattacacaactcttaaataatgatagtaacttaaataactta 35016388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 394 - 460
Target Start/End: Complemental strand, 5483971 - 5483905
Alignment:
Q  394 agacccactcatttttatgaaggtctattttagcaaccaacaccttttcacttggacacaaagaccc 460  Q
    ||||| ||||||||| || |||||||||||||||| |||||||||||||| ||||||| ||| ||||    
T  5483971 agaccaactcattttcataaaggtctattttagcatccaacaccttttcaattggacaaaaacaccc 5483905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 62 - 151
Target Start/End: Original strand, 1741996 - 1742088
Alignment:
Q  62 atgagactatttggaagatcttatgagaacaactta---cttgttcataatctattttcaacttatttccataaactctctatgataggttat 151  Q
    |||||||||||||| ||| ||||||  |||||||||   | ||| ||||| |||| |||||||||||||||||||||||  ||||||| ||||    
T  1741996 atgagactatttgggagagcttatggaaacaacttatgacatgtgcataagctatcttcaacttatttccataaactcttcatgatagattat 1742088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 113 - 146
Target Start/End: Complemental strand, 29419913 - 29419880
Alignment:
Q  113 ttttcaacttatttccataaactctctatgatag 146  Q
    |||||||||||||||||||||||||||| |||||    
T  29419913 ttttcaacttatttccataaactctctaggatag 29419880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 406 - 450
Target Start/End: Original strand, 9244017 - 9244061
Alignment:
Q  406 ttttatgaaggtctattttagcaaccaacaccttttcacttggac 450  Q
    ||||||||||||||||||||||| | | |||||||||| ||||||    
T  9244017 ttttatgaaggtctattttagcaccgagcaccttttcatttggac 9244061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 74; Significance: 1e-33; HSPs: 33)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 394 - 495
Target Start/End: Original strand, 20627538 - 20627639
Alignment:
Q  394 agacccactcatttttatgaaggtctattttagcaaccaacaccttttcacttggacacaaagacccttgtttttattttttgggaaaattaaaactgaa 493  Q
    ||||||||||||||| ||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||| |||||||| ||||||| ||    
T  20627538 agacccactcattttcatgaaagtctattttagcacccaacaccttttcacttggacacaaagacccttgtttttgttttatgggaaaactaaaactaaa 20627637  T
Q  494 gg 495  Q
    ||    
T  20627638 gg 20627639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 394 - 495
Target Start/End: Original strand, 31914534 - 31914635
Alignment:
Q  394 agacccactcatttttatgaaggtctattttagcaaccaacaccttttcacttggacacaaagacccttgtttttattttttgggaaaattaaaactgaa 493  Q
    ||||||||||||||| |||||| |||||||||||||||| ||||||||||||||||||||||||||||| ||||| |||||||| |||| ||||||| ||    
T  31914534 agacccactcattttcatgaagatctattttagcaaccagcaccttttcacttggacacaaagacccttatttttgttttttggaaaaactaaaactaaa 31914633  T
Q  494 gg 495  Q
    ||    
T  31914634 gg 31914635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 394 - 490
Target Start/End: Original strand, 34978355 - 34978451
Alignment:
Q  394 agacccactcatttttatgaaggtctattttagcaaccaacaccttttcacttggacacaaagacccttgtttttattttttgggaaaattaaaact 490  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||  ||| |||||| ||||| ||||||| | |||||||||||    
T  34978355 agacccactcatttttatgaaggtctattttatcaaccaacaccttttcaattggacctaaaaacccttatttttgttttttgagcaaattaaaact 34978451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 301 - 389
Target Start/End: Original strand, 55606253 - 55606341
Alignment:
Q  301 tgtgaattaatcacaatattgcacaactcttgaataatgatggtaacgtaaataacttaaactaaagataaatttggagttctaaacta 389  Q
    |||||||||||||||| |||||||||||||| ||||||||| ||||| |||||||||||||||| ||| | ||||||||||||||||||    
T  55606253 tgtgaattaatcacaacattgcacaactcttaaataatgatagtaacttaaataacttaaactagagaaagatttggagttctaaacta 55606341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 394 - 496
Target Start/End: Original strand, 31135181 - 31135283
Alignment:
Q  394 agacccactcatttttatgaaggtctattttagcaaccaacaccttttcacttggacacaaaga-cccttgtttttattttttgggaaaattaaaactga 492  Q
    ||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||| ||| | ||||||||||| |||||||||||||  |||||| |    
T  31135181 agaccaactcattttcatgaaggtctattttagcaaccaacaccttttcacttggacataaaaagcccttgttttt-ttttttgggaaaacaaaaactaa 31135279  T
Q  493 aggg 496  Q
    ||||    
T  31135280 aggg 31135283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 394 - 496
Target Start/End: Original strand, 34836761 - 34836863
Alignment:
Q  394 agacccactcatttttatgaaggtctattttagcaaccaacaccttttcacttggacacaaagacccttgtttttattttttgggaaaattaaaactgaa 493  Q
    ||||||||| |||||||||||||||||||||| ||||||||| ||||||| |||||| |||| |||||| ||||| ||||||| | ||||||||||| ||    
T  34836761 agacccacttatttttatgaaggtctattttatcaaccaacatcttttcaattggacccaaaaacccttatttttgttttttgagcaaattaaaactaaa 34836860  T
Q  494 ggg 496  Q
    |||    
T  34836861 ggg 34836863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 406 - 487
Target Start/End: Original strand, 11791384 - 11791465
Alignment:
Q  406 ttttatgaaggtctattttagcaaccaacaccttttcacttggacacaaagacccttgtttttattttttgggaaaattaaa 487  Q
    ||||||||| |||||||||||||| ||| |||||||||||||||||||||||||| | ||||||||||||||| ||||||||    
T  11791384 ttttatgaatgtctattttagcaagcaataccttttcacttggacacaaagacccctatttttattttttgggcaaattaaa 11791465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 394 - 501
Target Start/End: Original strand, 12206775 - 12206883
Alignment:
Q  394 agacccactcatttttatgaaggtctattttagcaaccaacaccttttcacttggacacaaa-gacccttgtttttattttttgggaaaattaaaactga 492  Q
    ||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||| | ||    ||||  ||||||| | |||||||||||||    
T  12206775 agacccactcatttttatgaaggtctattttagcaacctgcaccttttcacttggacacaaatggccacatttttgtttttttgaggaaattaaaactga 12206874  T
Q  493 agggtaaaa 501  Q
    |||||||||    
T  12206875 agggtaaaa 12206883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 394 - 501
Target Start/End: Original strand, 31689188 - 31689296
Alignment:
Q  394 agacccactcatttttatgaaggtctattttagcaaccaacaccttttcacttggacacaaagacccttgttttt-attttttgggaaaattaaaactga 492  Q
    ||||||||||||||| ||||||||||||||||||||||  |||||||||||| |||||||||  |||  ||||||  ||||||| | |||||||||||||    
T  31689188 agacccactcattttcatgaaggtctattttagcaacctgcaccttttcactcggacacaaatgcccacgtttttgtttttttgaggaaattaaaactga 31689287  T
Q  493 agggtaaaa 501  Q
    |||||||||    
T  31689288 agggtaaaa 31689296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 394 - 501
Target Start/End: Complemental strand, 12210975 - 12210868
Alignment:
Q  394 agacccactcatttttatgaaggtctattttagcaaccaacaccttttcacttggacacaaagacccttgtttttattttttgggaaaattaaaactgaa 493  Q
    ||||| ||||||||| ||||||||||||||||||||||  ||||||||||||||||||||||  |||   ||||| ||||||| | ||||||||| ||||    
T  12210975 agaccaactcattttcatgaaggtctattttagcaacctgcaccttttcacttggacacaaatgcccacatttttgttttttgaggaaattaaaattgaa 12210876  T
Q  494 gggtaaaa 501  Q
    ||||||||    
T  12210875 gggtaaaa 12210868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 394 - 477
Target Start/End: Complemental strand, 23089327 - 23089244
Alignment:
Q  394 agacccactcatttttatgaaggtctattttagcaaccaacaccttttcacttggacacaaagacccttgtttttattttttgg 477  Q
    ||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||  || |||||| ||||| ||||||||    
T  23089327 agacccactcattttcatgtaggtctattttagcaaccaacaccttttcacttggacaagaatacccttatttttgttttttgg 23089244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 394 - 496
Target Start/End: Complemental strand, 20628395 - 20628294
Alignment:
Q  394 agacccactcatttttatgaaggtctattttagcaaccaacaccttttcacttggacacaaagacccttgtttttattttttgggaaaattaaaactgaa 493  Q
    |||||||| ||||||||||||||||||||||| ||| ||||||||||||||| ||||| ||||| || ||||||| ||||||| || |||||||||| ||    
T  20628395 agacccacccatttttatgaaggtctattttaccaagcaacaccttttcactaggacaaaaaga-ccatgtttttgttttttgagacaattaaaactaaa 20628297  T
Q  494 ggg 496  Q
    |||    
T  20628296 ggg 20628294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 394 - 496
Target Start/End: Complemental strand, 34838028 - 34837926
Alignment:
Q  394 agacccactcatttttatgaaggtctattttagcaaccaacaccttttcacttggacacaaagacccttgtttttattttttgggaaaattaaaactgaa 493  Q
    |||||||||||||||||||||| | |||||||||||||||||| |||||| ||||||||||| || ||| ||||| ||||||  | ||||||||||| ||    
T  34838028 agacccactcatttttatgaagttttattttagcaaccaacactttttcaattggacacaaaaacacttatttttgtttttttagcaaattaaaactaaa 34837929  T
Q  494 ggg 496  Q
    |||    
T  34837928 ggg 34837926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 407 - 487
Target Start/End: Complemental strand, 11792362 - 11792282
Alignment:
Q  407 tttatgaaggtctattttagcaaccaacaccttttcacttggacacaaagacccttgtttttattttttgggaaaattaaa 487  Q
    ||||||||||||||||||||||| | |||||||| |||||||||||||| |||||| ||||| ||||||||| ||||||||    
T  11792362 tttatgaaggtctattttagcaagctacacctttacacttggacacaaaaacccttatttttgttttttgggtaaattaaa 11792282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 395 - 495
Target Start/End: Original strand, 42523214 - 42523314
Alignment:
Q  395 gacccactcatttttatgaaggtctattttagcaaccaacaccttttcacttggacacaaagacccttgtttttattttttgggaaaattaaaactgaag 494  Q
    ||||||||||||||||||||||||| |||||||||  |||||||||||| ||||||  |||||||| | ||||| ||||||| ||||| || ||||||||    
T  42523214 gacccactcatttttatgaaggtctcttttagcaagtaacaccttttcatttggaccaaaagacccatatttttgttttttgagaaaactagaactgaag 42523313  T
Q  495 g 495  Q
    |    
T  42523314 g 42523314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 394 - 477
Target Start/End: Original strand, 23088287 - 23088370
Alignment:
Q  394 agacccactcatttttatgaaggtctattttagcaaccaacaccttttcacttggacacaaagacccttgtttttattttttgg 477  Q
    ||||||||||||||| |||||||||||||||||||||||||||||| |||||| ||||  || |||||| ||||| ||||||||    
T  23088287 agacccactcattttcatgaaggtctattttagcaaccaacaccttctcacttcgacaagaatacccttatttttgttttttgg 23088370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 394 - 477
Target Start/End: Complemental strand, 54501699 - 54501616
Alignment:
Q  394 agacccactcatttttatgaaggtctattttagcaaccaacaccttttcacttggacacaaagacccttgtttttattttttgg 477  Q
    |||| |||||||||||||||||||||| ||||||||||||||| |||| ||||||||| |||||| | ||||||| ||||||||    
T  54501699 agactcactcatttttatgaaggtctaatttagcaaccaacacatttttacttggacaaaaagactcatgtttttgttttttgg 54501616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 301 - 390
Target Start/End: Original strand, 38411875 - 38411964
Alignment:
Q  301 tgtgaattaatcacaatattgcacaactcttgaataatgatggtaacgtaaataacttaaactaaagataaatttggagttctaaactag 390  Q
    |||||||||||||||| ||||||||||| || || |||||| | || ||||||||||||| ||| ||||| |||||||||||||||||||    
T  38411875 tgtgaattaatcacaacattgcacaacttttaaacaatgataggaatgtaaataacttaacctagagatagatttggagttctaaactag 38411964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 298 - 386
Target Start/End: Original strand, 13198084 - 13198172
Alignment:
Q  298 cggtgtgaattaatcacaatattgcacaactcttgaataatgatggtaacgtaaataacttaaactaaagataaatttggagttctaaa 386  Q
    ||||||||||||||||||| |||||||||||||| || |||||| ||||| |  ||||||||||||| | | | |||||||||||||||    
T  13198084 cggtgtgaattaatcacaacattgcacaactcttaaacaatgatcgtaactttgataacttaaactagacaaagatttggagttctaaa 13198172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 298 - 390
Target Start/End: Complemental strand, 25968165 - 25968073
Alignment:
Q  298 cggtgtgaattaatcacaatattgcacaactcttgaataatgatggtaacgtaaataacttaaactaaagataaatttggagttctaaactag 390  Q
    ||||||||||||||||||| |||||||||||||| ||||||||| || || || ||||||||||||| ||| | || ||  ||||||||||||    
T  25968165 cggtgtgaattaatcacaacattgcacaactcttaaataatgatagtcacttacataacttaaactagagaaagatctgacgttctaaactag 25968073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 394 - 450
Target Start/End: Complemental strand, 41164225 - 41164169
Alignment:
Q  394 agacccactcatttttatgaaggtctattttagcaaccaacaccttttcacttggac 450  Q
    ||||||| ||||||||||||| ||||||||||||||||||||| |||||||||||||    
T  41164225 agacccattcatttttatgaaagtctattttagcaaccaacacattttcacttggac 41164169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 410 - 455
Target Start/End: Complemental strand, 31135939 - 31135894
Alignment:
Q  410 atgaaggtctattttagcaaccaacaccttttcacttggacacaaa 455  Q
    |||||||| |||||||||||||||||||||||||||||||||||||    
T  31135939 atgaaggtgtattttagcaaccaacaccttttcacttggacacaaa 31135894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 394 - 443
Target Start/End: Original strand, 48314378 - 48314427
Alignment:
Q  394 agacccactcatttttatgaaggtctattttagcaaccaacaccttttca 443  Q
    ||||||||||||||| ||||| |||||||||||||| |||||||||||||    
T  48314378 agacccactcattttcatgaaagtctattttagcaagcaacaccttttca 48314427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 298 - 386
Target Start/End: Complemental strand, 28147148 - 28147060
Alignment:
Q  298 cggtgtgaattaatcacaatattgcacaactcttgaataatgatggtaacgtaaataacttaaactaaagataaatttggagttctaaa 386  Q
    ||||||||||||||||||| |||||||||||||| ||||||  |   ||| ||||||||||||||||  || | ||||||| |||||||    
T  28147148 cggtgtgaattaatcacaacattgcacaactcttaaataatattatcaacttaaataacttaaactagggaaagatttggaattctaaa 28147060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 394 - 429
Target Start/End: Complemental strand, 31908410 - 31908375
Alignment:
Q  394 agacccactcatttttatgaaggtctattttagcaa 429  Q
    ||||||||||||||||||||||||||||||||||||    
T  31908410 agacccactcatttttatgaaggtctattttagcaa 31908375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 224 - 277
Target Start/End: Complemental strand, 11440815 - 11440762
Alignment:
Q  224 gttttaaataacggtcacggtcgcgtataagatttcacgatttcggctgttacg 277  Q
    |||||||||||||||  |||||| | ||| ||||||||||||||||||||||||    
T  11440815 gttttaaataacggttgcggtcgtggatatgatttcacgatttcggctgttacg 11440762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 100 - 140
Target Start/End: Original strand, 6466051 - 6466091
Alignment:
Q  100 tgttcataatctattttcaacttatttccataaactctcta 140  Q
    ||||||||| ||||||||||||||||||||||| |||||||    
T  6466051 tgttcataagctattttcaacttatttccataatctctcta 6466091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 406 - 450
Target Start/End: Complemental strand, 12921907 - 12921863
Alignment:
Q  406 ttttatgaaggtctattttagcaaccaacaccttttcacttggac 450  Q
    ||||||||||||||||||||||| ||| |||||||||| ||||||    
T  12921907 ttttatgaaggtctattttagcatccagcaccttttcatttggac 12921863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 394 - 450
Target Start/End: Complemental strand, 42523942 - 42523886
Alignment:
Q  394 agacccactcatttttatgaaggtctattttagcaaccaacaccttttcacttggac 450  Q
    |||| |||||||||| ||||| |||| |||||||||  |||||||||||||||||||    
T  42523942 agactcactcattttcatgaaagtctgttttagcaagtaacaccttttcacttggac 42523886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 298 - 364
Target Start/End: Complemental strand, 11440733 - 11440664
Alignment:
Q  298 cggtgtgaattaatcacaatattgcacaactctt---gaataatgatggtaacgtaaataacttaaacta 364  Q
    ||||||||||||||||||| ||||  ||||||||    ||||||||| |||| |||||||||||||||||    
T  11440733 cggtgtgaattaatcacaacattgttcaactcttaaataataatgatagtaatgtaaataacttaaacta 11440664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 394 - 443
Target Start/End: Complemental strand, 48315242 - 48315193
Alignment:
Q  394 agacccactcatttttatgaaggtctattttagcaaccaacaccttttca 443  Q
    ||||||||| ||||| || ||||| ||||||||||| |||||||||||||    
T  48315242 agacccacttattttcataaaggtttattttagcaagcaacaccttttca 48315193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 406 - 450
Target Start/End: Original strand, 12921152 - 12921196
Alignment:
Q  406 ttttatgaaggtctattttagcaaccaacaccttttcacttggac 450  Q
    |||||||||||| |||||||||| ||| |||||||||| ||||||    
T  12921152 ttttatgaaggtttattttagcatccagcaccttttcatttggac 12921196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 81 - 145
Target Start/End: Complemental strand, 35064939 - 35064875
Alignment:
Q  81 cttatgagaacaacttacttgttcataatctattttcaacttatttccataaactctctatgata 145  Q
    ||||||| |||||| ||| |||| ||||  | |||||| ||||||||||||||||||| ||||||    
T  35064939 cttatgaaaacaacctacatgtttataaattgttttcagcttatttccataaactctccatgata 35064875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 72; Significance: 2e-32; HSPs: 18)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 394 - 501
Target Start/End: Complemental strand, 54285872 - 54285765
Alignment:
Q  394 agacccactcatttttatgaaggtctattttagcaaccaacaccttttcacttggacacaaagacccttgtttttattttttgggaaaattaaaactgaa 493  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||  |||  |||||| ||||||| | ||||||||||||||    
T  54285872 agacccactcatttttatgaaggtctattttagcaacctacaccttttcatttggacacaaatgcccacgtttttgttttttgaggaaattaaaactgaa 54285773  T
Q  494 gggtaaaa 501  Q
    ||||||||    
T  54285772 gggtaaaa 54285765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 394 - 498
Target Start/End: Original strand, 4300944 - 4301048
Alignment:
Q  394 agacccactcatttttatgaaggtctattttagcaaccaacaccttttcacttggacacaaagacccttgtttttattttttgggaaaattaaaactgaa 493  Q
    ||||||||| ||||| |||||| |||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||   |||||||| ||||    
T  4300944 agacccacttattttcatgaagatctattttagcaaccaacaccttttcacttggacacaaaaccccttgtttttattttttggatcaattaaaattgaa 4301043  T
Q  494 gggta 498  Q
    |||||    
T  4301044 gggta 4301048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 396 - 501
Target Start/End: Original strand, 17615035 - 17615140
Alignment:
Q  396 acccactcatttttatgaaggtctattttagcaaccaacaccttttcacttggacacaaagacccttgtttttattttttgggaaaattaaaactgaagg 495  Q
    |||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||  ||   |||||| ||||||| | ||||||||||||||||    
T  17615035 acccactcatttttatgaaggtctattttagcaacttgcaccttttcacttggacacaaatgccaacgtttttgttttttgaggaaattaaaactgaagg 17615134  T
Q  496 gtaaaa 501  Q
    ||||||    
T  17615135 gtaaaa 17615140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 394 - 501
Target Start/End: Complemental strand, 17619201 - 17619094
Alignment:
Q  394 agacccactcatttttatgaaggtctattttagcaaccaacaccttttcacttggacacaaagacccttgtttttattttttgggaaaattaaaactgaa 493  Q
    ||||||||||||||| |||||||||||||||||||||||  |||||||||||||||||||||  |||  |||| | ||||||  | ||||||||||||||    
T  17619201 agacccactcattttcatgaaggtctattttagcaaccagtaccttttcacttggacacaaatgcccacgtttatgtttttttaggaaattaaaactgaa 17619102  T
Q  494 gggtaaaa 501  Q
    ||||||||    
T  17619101 gggtaaaa 17619094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 394 - 496
Target Start/End: Complemental strand, 40929914 - 40929811
Alignment:
Q  394 agacccactcatttttatgaaggtctattttagcaaccaacaccttttcacttggacacaaagacccttgttttta-ttttttgggaaaattaaaactga 492  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||  |||||  | |||| ||| ||||||||||||||||||||| |    
T  40929914 agacccactcatttttatgaaggtttattttagcaaccaacaccttttcatttggacgaaaagattcatgttattatttttttgggaaaattaaaactaa 40929815  T
Q  493 aggg 496  Q
    ||||    
T  40929814 aggg 40929811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 394 - 501
Target Start/End: Complemental strand, 29032861 - 29032755
Alignment:
Q  394 agacccactcatttttatgaaggtctattttagcaaccaacaccttttcacttggacacaaagacccttgtttttattttttgggaaaattaaaactgaa 493  Q
    ||||||| ||||||||||||||||||||||||||||||   ||| |||||||||||||||||  |||   ||||| ||||||| | ||||||||||||||    
T  29032861 agacccattcatttttatgaaggtctattttagcaacctgtacc-tttcacttggacacaaatgcccacatttttgttttttgaggaaattaaaactgaa 29032763  T
Q  494 gggtaaaa 501  Q
    ||||||||    
T  29032762 gggtaaaa 29032755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 301 - 390
Target Start/End: Original strand, 11783413 - 11783502
Alignment:
Q  301 tgtgaattaatcacaatattgcacaactcttgaataatgatggtaacgtaaataacttaaactaaagataaatttggagttctaaactag 390  Q
    |||||| |||| |||| |||||||||||||| ||||||||| ||||| |||| ||||||||| | ||||| |||||||||||||||||||    
T  11783413 tgtgaagtaattacaacattgcacaactcttaaataatgatagtaacataaagaacttaaacaagagatagatttggagttctaaactag 11783502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 394 - 495
Target Start/End: Complemental strand, 28422902 - 28422801
Alignment:
Q  394 agacccactcatttttatgaaggtctattttagcaaccaacaccttttcacttggacacaaagacccttgtttttattttttgggaaaattaaaactgaa 493  Q
    ||||||||||||||||||||| ||||||||||||||||| ||||||||||||| ||  ||||   || ||||||| ||||||| ||||||||| ||| ||    
T  28422902 agacccactcatttttatgaaagtctattttagcaaccatcaccttttcactttgatgcaaatgtccatgtttttgttttttgagaaaattaatactaaa 28422803  T
Q  494 gg 495  Q
    ||    
T  28422802 gg 28422801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 394 - 445
Target Start/End: Complemental strand, 27359892 - 27359841
Alignment:
Q  394 agacccactcatttttatgaaggtctattttagcaaccaacaccttttcact 445  Q
    ||||||||||||||| |||||||||||||||||||| |||||||||||||||    
T  27359892 agacccactcattttcatgaaggtctattttagcaaacaacaccttttcact 27359841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 304 - 376
Target Start/End: Complemental strand, 7299267 - 7299195
Alignment:
Q  304 gaattaatcacaatattgcacaactcttgaataatgatggtaacgtaaataacttaaactaaagataaatttg 376  Q
    ||||||| ||||| |||| ||||||||| ||||| ||| |||||||||||||||||||||| ||||| |||||    
T  7299267 gaattaaccacaacattgtacaactcttaaataacgatagtaacgtaaataacttaaactagagatagatttg 7299195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 394 - 476
Target Start/End: Original strand, 51341885 - 51341967
Alignment:
Q  394 agacccactcatttttatgaaggtctattttagcaaccaacaccttttcacttggacacaaagacccttgtttttattttttg 476  Q
    ||||| ||||||| | |||||||||||||||| ||||||||||||||| ||||| |||  || |||| ||||||| |||||||    
T  51341885 agacctactcattctcatgaaggtctattttaacaaccaacacctttttacttgaacaagaatacccatgtttttgttttttg 51341967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 421 - 482
Target Start/End: Original strand, 1602477 - 1602538
Alignment:
Q  421 ttttagcaaccaacaccttttcacttggacacaaagacccttgtttttattttttgggaaaa 482  Q
    |||||||||||||||||||||||||| ||||||||  ||| ||||||| ||||||| |||||    
T  1602477 ttttagcaaccaacaccttttcactttgacacaaatgcccatgtttttgttttttgagaaaa 1602538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 394 - 476
Target Start/End: Original strand, 40177738 - 40177816
Alignment:
Q  394 agacccactcatttttatgaaggtctattttagcaaccaacaccttttcacttggacacaaagacccttgtttttattttttg 476  Q
    ||||||||||||||||| ||||    |||| | |||||||||||||||||| | ||||||||||||||| ||||| |||||||    
T  40177738 agacccactcatttttacgaag----atttaaacaaccaacaccttttcacctagacacaaagacccttatttttgttttttg 40177816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 406 - 481
Target Start/End: Complemental strand, 33148344 - 33148269
Alignment:
Q  406 ttttatgaaggtctattttagcaaccaacaccttttcacttggacacaaagacccttgtttttattttttgggaaa 481  Q
    ||||||||||||||||||||||||    |||||||||||||||||| |||  ||| ||||||| ||||||| ||||    
T  33148344 ttttatgaaggtctattttagcaaggtgcaccttttcacttggacataaatgcccatgtttttgttttttgagaaa 33148269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 394 - 443
Target Start/End: Complemental strand, 27317532 - 27317483
Alignment:
Q  394 agacccactcatttttatgaaggtctattttagcaaccaacaccttttca 443  Q
    |||||| |||||||| |||||||| ||||||||||| |||||||||||||    
T  27317532 agacccgctcattttcatgaaggtttattttagcaagcaacaccttttca 27317483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 406 - 459
Target Start/End: Complemental strand, 14460178 - 14460125
Alignment:
Q  406 ttttatgaaggtctattttagcaaccaacaccttttcacttggacacaaagacc 459  Q
    ||||||||||||||||||||||||  | |||||||||| ||||||  |||||||    
T  14460178 ttttatgaaggtctattttagcaattagcaccttttcatttggactaaaagacc 14460125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 406 - 450
Target Start/End: Complemental strand, 2841251 - 2841207
Alignment:
Q  406 ttttatgaaggtctattttagcaaccaacaccttttcacttggac 450  Q
    ||||||||||||||||||||||  | |||||||||||| ||||||    
T  2841251 ttttatgaaggtctattttagcgccaaacaccttttcatttggac 2841207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 110 - 146
Target Start/End: Original strand, 49465951 - 49465987
Alignment:
Q  110 ctattttcaacttatttccataaactctctatgatag 146  Q
    |||||||||||||||||||||||||||| || |||||    
T  49465951 ctattttcaacttatttccataaactctttaggatag 49465987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 69; Significance: 1e-30; HSPs: 11)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 394 - 482
Target Start/End: Original strand, 33471176 - 33471264
Alignment:
Q  394 agacccactcatttttatgaaggtctattttagcaaccaacaccttttcacttggacacaaagacccttgtttttattttttgggaaaa 482  Q
    ||||||| ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| ||||||    
T  33471176 agacccattcattttcatgaaggtctattttagcaaccaacaccttttcatttggacacaaagacccttgtttttgtttttttggaaaa 33471264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 299 - 390
Target Start/End: Complemental strand, 41283655 - 41283564
Alignment:
Q  299 ggtgtgaattaatcacaatattgcacaactcttgaataatgatggtaacgtaaataacttaaactaaagataaatttggagttctaaactag 390  Q
    |||||||||||||||||| ||||||||||| |||||||| ||| ||||| |||||||||||||||| ||| | ||||| |||||||||||||    
T  41283655 ggtgtgaattaatcacaacattgcacaacttttgaataaagatagtaacataaataacttaaactagagaaagatttgaagttctaaactag 41283564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 296 - 395
Target Start/End: Complemental strand, 36491654 - 36491555
Alignment:
Q  296 cacggtgtgaattaatcacaatattgcacaactcttgaataatgatggtaacgtaaataacttaaactaaagataaatttggagttctaaactaggtgag 395  Q
    |||||||||||||||||| || |||||| || |||| ||| ||||| |||| ||||||||| ||||||| ||||| |||| |||||||||||||| ||||    
T  36491654 cacggtgtgaattaatcataacattgcaaaattcttaaatgatgatagtaaagtaaataacataaactagagatagattttgagttctaaactagatgag 36491555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 395 - 476
Target Start/End: Original strand, 22671618 - 22671699
Alignment:
Q  395 gacccactcatttttatgaaggtctattttagcaaccaacaccttttcacttggacacaaagacccttgtttttattttttg 476  Q
    |||||||||||||| |||||||||||||||| |||||||||||||||||| || ||| | | |||| ||||||| |||||||    
T  22671618 gacccactcattttcatgaaggtctattttaacaaccaacaccttttcacctgtacaaagatacccgtgtttttgttttttg 22671699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 302 - 390
Target Start/End: Original strand, 22927072 - 22927160
Alignment:
Q  302 gtgaattaatcacaatattgcacaactcttgaataatgatggtaacgtaaataacttaaactaaagataaatttggagttctaaactag 390  Q
    ||||||||||||||| ||||| |||||||| ||||||||  ||||| |||||||||||||||| ||||| ||| |  ||||||||||||    
T  22927072 gtgaattaatcacaacattgcccaactcttaaataatgaaagtaacataaataacttaaactagagatagattcgaggttctaaactag 22927160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 298 - 389
Target Start/End: Original strand, 39426094 - 39426183
Alignment:
Q  298 cggtgtgaattaatcacaatattgcacaactcttgaataatgatggtaacgtaaataacttaaactaaagataaatttggagttctaaacta 389  Q
    |||||||||||||| |||| |||||||||||| |  ||| |||| |||| |||||||||||||| || ||||| ||||||| ||||||||||    
T  39426094 cggtgtgaattaattacaacattgcacaactcatacatattgatagtaatgtaaataacttaaa-tatagatatatttgga-ttctaaacta 39426183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 299 - 386
Target Start/End: Original strand, 13424644 - 13424727
Alignment:
Q  299 ggtgtgaattaatcacaatattgcacaactcttgaataatgatggtaacgtaaataacttaaactaaagataaatttggagttctaaa 386  Q
    |||||||||||||||||| |||||||||||||| ||||||||    ||| ||||||||||||| || ||| | |||| || |||||||    
T  13424644 ggtgtgaattaatcacaacattgcacaactcttaaataatga----aacttaaataacttaaaatagagaaagatttagaattctaaa 13424727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 394 - 476
Target Start/End: Original strand, 23989580 - 23989658
Alignment:
Q  394 agacccactcatttttatgaaggtctattttagcaaccaacaccttttcacttggacacaaagacccttgtttttattttttg 476  Q
    ||||||||||||||||| ||||    |||| | |||||||||||||||||| | |||||||||| |||| ||||| |||||||    
T  23989580 agacccactcatttttacgaag----atttaaacaaccaacaccttttcacctagacacaaagatccttatttttgttttttg 23989658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 406 - 459
Target Start/End: Complemental strand, 33471898 - 33471845
Alignment:
Q  406 ttttatgaaggtctattttagcaaccaacaccttttcacttggacacaaagacc 459  Q
    ||||||||||||||||||||||||| | |||||||||| ||||||  |||||||    
T  33471898 ttttatgaaggtctattttagcaactagcaccttttcatttggactaaaagacc 33471845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 420 - 476
Target Start/End: Original strand, 23995041 - 23995097
Alignment:
Q  420 attttagcaaccaacaccttttcacttggacacaaagacccttgtttttattttttg 476  Q
    |||| |||||||||||||||||||| |  |||||||||||||| ||||| |||||||    
T  23995041 atttaagcaaccaacaccttttcacctaaacacaaagacccttatttttgttttttg 23995097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 352 - 390
Target Start/End: Complemental strand, 19967612 - 19967574
Alignment:
Q  352 ataacttaaactaaagataaatttggagttctaaactag 390  Q
    ||||||||||||||||| | |||||||||||||||||||    
T  19967612 ataacttaaactaaagaaagatttggagttctaaactag 19967574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 68; Significance: 4e-30; HSPs: 17)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 394 - 501
Target Start/End: Complemental strand, 16106081 - 16105974
Alignment:
Q  394 agacccactcatttttatgaaggtctattttagcaaccaacaccttttcacttggacacaaagacccttgtttttattttttgggaaaattaaaactgaa 493  Q
    ||||||||||||||| ||||||||||||||||||||||  ||||||||||||||||||||||  |||  |||||| ||||||| | ||||||||||||||    
T  16106081 agacccactcattttcatgaaggtctattttagcaacctgcaccttttcacttggacacaaatgcccacgtttttgttttttgaggaaattaaaactgaa 16105982  T
Q  494 gggtaaaa 501  Q
    ||||||||    
T  16105981 gggtaaaa 16105974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 394 - 501
Target Start/End: Complemental strand, 16113321 - 16113214
Alignment:
Q  394 agacccactcatttttatgaaggtctattttagcaaccaacaccttttcacttggacacaaagacccttgtttttattttttgggaaaattaaaactgaa 493  Q
    ||||||||||||||| ||||||||||||||||||||||  ||||||||||||||||||||||  |||  |||||| ||||||| | ||||||||||||||    
T  16113321 agacccactcattttcatgaaggtctattttagcaacctgcaccttttcacttggacacaaatgcccacgtttttgttttttgaggaaattaaaactgaa 16113222  T
Q  494 gggtaaaa 501  Q
    ||||||||    
T  16113221 gggtaaaa 16113214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 399 - 490
Target Start/End: Original strand, 1636864 - 1636955
Alignment:
Q  399 cactcatttttatgaaggtctattttagcaaccaacaccttttcacttggacacaaagacccttgtttttattttttgggaaaattaaaact 490  Q
    |||||||||| |||||| |||||||| |||||||||| ||||||| |||||||||||||||||||||||| |||||||| |||| |||||||    
T  1636864 cactcattttcatgaagatctatttttgcaaccaacatcttttcatttggacacaaagacccttgtttttgttttttggaaaaactaaaact 1636955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 394 - 501
Target Start/End: Original strand, 16101534 - 16101641
Alignment:
Q  394 agacccactcatttttatgaaggtctattttagcaaccaacaccttttcacttggacacaaagacccttgtttttattttttgggaaaattaaaactgaa 493  Q
    |||| |||||||||| ||||||||||||||||||||||  ||||||||||||||||||||||  |||  |||||| ||||||| | |||||||||| |||    
T  16101534 agacacactcattttcatgaaggtctattttagcaacctgcaccttttcacttggacacaaatgcccacgtttttgttttttgaggaaattaaaaccgaa 16101633  T
Q  494 gggtaaaa 501  Q
    ||||||||    
T  16101634 gggtaaaa 16101641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 394 - 473
Target Start/End: Complemental strand, 30972063 - 30971984
Alignment:
Q  394 agacccactcatttttatgaaggtctattttagcaaccaacaccttttcacttggacacaaagacccttgtttttatttt 473  Q
    ||||||||||| ||| |||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||| ||||    
T  30972063 agacccactcaatttcatgaaggtctattttagcaaccaacaccttttcatttggacacaaaaacccttgtttttttttt 30971984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 221 - 366
Target Start/End: Complemental strand, 13402319 - 13402180
Alignment:
Q  221 aaggttttaaataacggtcacggtcgcgtataagatttcacgatttcggctgttacgggtgctggatacagattgcacggtgtgaattaatcacaatatt 320  Q
    ||||||| |||||||||||  ||||||||||||||||||  |||||| |||||||||| |      | | | |  | ||||||||||||||||||| |||    
T  13402319 aaggtttcaaataacggtcgtggtcgcgtataagatttcgtgatttcagctgttacggat------tgcggttgtcgcggtgtgaattaatcacaacatt 13402226  T
Q  321 gcacaactcttgaataatgatggtaacgtaaataacttaaactaaa 366  Q
     |||||||||| ||||||||| |||| |||||||||||||||||||    
T  13402225 acacaactcttaaataatgatagtaaggtaaataacttaaactaaa 13402180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 394 - 460
Target Start/End: Original strand, 30971296 - 30971362
Alignment:
Q  394 agacccactcatttttatgaaggtctattttagcaaccaacaccttttcacttggacacaaagaccc 460  Q
    ||||||||||||||| ||||||||||||||||||||||| ||| |||||||||||||||||| ||||    
T  30971296 agacccactcattttcatgaaggtctattttagcaaccatcactttttcacttggacacaaaaaccc 30971362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 394 - 490
Target Start/End: Complemental strand, 5152510 - 5152414
Alignment:
Q  394 agacccactcatttttatgaaggtctattttagcaaccaacaccttttcacttggacacaaagacccttgtttttattttttgggaaaattaaaact 490  Q
    |||||| |||||||||||||||||||||||||||||    |||||||||| ||||||  ||||| || ||||||| ||||||||||||| |||||||    
T  5152510 agacccgctcatttttatgaaggtctattttagcaagtggcaccttttcatttggaccaaaagatccatgtttttgttttttgggaaaactaaaact 5152414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 298 - 366
Target Start/End: Complemental strand, 13396950 - 13396882
Alignment:
Q  298 cggtgtgaattaatcacaatattgcacaactcttgaataatgatggtaacgtaaataacttaaactaaa 366  Q
    ||||||||||||||||||| ||| |||||||||| ||||||||| |||| |||||||||||||||||||    
T  13396950 cggtgtgaattaatcacaacattacacaactcttaaataatgatagtaaggtaaataacttaaactaaa 13396882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 394 - 496
Target Start/End: Original strand, 28965786 - 28965888
Alignment:
Q  394 agacccactcatttttatgaaggtctattttagcaaccaacaccttttcacttggacacaaagacccttgtttttattttttgggaaaattaaaactgaa 493  Q
    ||||||||| ||||||||||| || ||||||| |||| |||||||||||| ||||||  ||| |||||| ||||| ||||||| | ||||||||||| ||    
T  28965786 agacccacttatttttatgaaagtttattttatcaacaaacaccttttcaattggacctaaaaacccttatttttgttttttgagcaaattaaaactaaa 28965885  T
Q  494 ggg 496  Q
    |||    
T  28965886 ggg 28965888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 402 - 451
Target Start/End: Original strand, 32744029 - 32744078
Alignment:
Q  402 tcatttttatgaaggtctattttagcaaccaacaccttttcacttggaca 451  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  32744029 tcatttttatgaaggtctattttagcaaccaacaccttttcacgtggaca 32744078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 298 - 390
Target Start/End: Original strand, 23489973 - 23490065
Alignment:
Q  298 cggtgtgaattaatcacaatattgcacaactcttgaataatgatggtaacgtaaataacttaaactaaagataaatttggagttctaaactag 390  Q
    ||||||||||||||||||| |||| ||||||||| |||| |||| ||||| || | ||| ||||||| ||| | |||||||||||||||||||    
T  23489973 cggtgtgaattaatcacaacattgtacaactcttaaatactgatagtaacttagacaacataaactagagaaagatttggagttctaaactag 23490065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 394 - 429
Target Start/End: Original strand, 42757617 - 42757652
Alignment:
Q  394 agacccactcatttttatgaaggtctattttagcaa 429  Q
    |||||||||||||||||||||||| |||||||||||    
T  42757617 agacccactcatttttatgaaggtttattttagcaa 42757652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 221 - 275
Target Start/End: Original strand, 7154183 - 7154237
Alignment:
Q  221 aaggttttaaataacggtcacggtcgcgtataagatttcacgatttcggctgtta 275  Q
    ||||||||||| ||||||| ||||||  |||| ||||||| ||||||||||||||    
T  7154183 aaggttttaaacaacggtcgcggtcggctataggatttcatgatttcggctgtta 7154237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 406 - 459
Target Start/End: Complemental strand, 1637617 - 1637564
Alignment:
Q  406 ttttatgaaggtctattttagcaaccaacaccttttcacttggacacaaagacc 459  Q
    ||||||||||||||||||||||||  | |||||||||| ||||||  |||||||    
T  1637617 ttttatgaaggtctattttagcaattagcaccttttcatttggactgaaagacc 1637564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 400 - 433
Target Start/End: Complemental strand, 28966569 - 28966536
Alignment:
Q  400 actcatttttatgaaggtctattttagcaaccaa 433  Q
    |||||||||||||||| |||||||||||||||||    
T  28966569 actcatttttatgaagttctattttagcaaccaa 28966536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 299 - 331
Target Start/End: Complemental strand, 14370848 - 14370816
Alignment:
Q  299 ggtgtgaattaatcacaatattgcacaactctt 331  Q
    |||||||||||||||||| ||||||||||||||    
T  14370848 ggtgtgaattaatcacaacattgcacaactctt 14370816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 67; Significance: 2e-29; HSPs: 23)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 406 - 496
Target Start/End: Complemental strand, 34269129 - 34269039
Alignment:
Q  406 ttttatgaaggtctattttagcaaccaacaccttttcacttggacacaaagacccttgtttttattttttgggaaaattaaaactgaaggg 496  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||  |||||||| | ||||||    
T  34269129 ttttatgaaggtctattttagcaagcaacaccttttcatttggacacaaagacccttgtttttattttttggacaaattaaatcagaaggg 34269039  T

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Target: chr1; HSP #2
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 394 - 487
Target Start/End: Original strand, 34267987 - 34268080
Alignment:
Q  394 agacccactcatttttatgaaggtctattttagcaaccaacaccttttcacttggacacaaagacccttgtttttattttttgggaaaattaaa 487  Q
    ||||||||||  |||||| ||||||||||||||||| ||||||||||||||||||||||||| ||||||| |||||||||||||| ||||||||    
T  34267987 agacccactccattttatcaaggtctattttagcaagcaacaccttttcacttggacacaaaaacccttgcttttattttttgggcaaattaaa 34268080  T

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Target: chr1; HSP #3
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 406 - 474
Target Start/End: Complemental strand, 34275364 - 34275296
Alignment:
Q  406 ttttatgaaggtctattttagcaaccaacaccttttcacttggacacaaagacccttgtttttattttt 474  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||    
T  34275364 ttttatgaaggtctattttagcaagcaacaccttttcatttggacacaaagacccttgtttttattttt 34275296  T

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Target: chr1; HSP #4
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 298 - 390
Target Start/End: Complemental strand, 12990680 - 12990588
Alignment:
Q  298 cggtgtgaattaatcacaatattgcacaactcttgaataatgatggtaacgtaaataacttaaactaaagataaatttggagttctaaactag 390  Q
    |||||||||||| |||||| |||||||||||||| ||||||||| ||||| |||||||||||||||| ||| | ||||| |||||||||||||    
T  12990680 cggtgtgaattagtcacaacattgcacaactcttaaataatgatagtaacttaaataacttaaactagagaaagatttgaagttctaaactag 12990588  T

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Target: chr1; HSP #5
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 394 - 490
Target Start/End: Complemental strand, 17239463 - 17239367
Alignment:
Q  394 agacccactcatttttatgaaggtctattttagcaaccaacaccttttcacttggacacaaagacccttgtttttattttttgggaaaattaaaact 490  Q
    ||||||||||||||||||||||||||||||||||||  | |||||||||| ||||||  ||| |||| ||||||| ||||||||||||| |||||||    
T  17239463 agacccactcatttttatgaaggtctattttagcaagtagcaccttttcatttggaccaaaaaacccatgtttttgttttttgggaaaactaaaact 17239367  T

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Target: chr1; HSP #6
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 235 - 364
Target Start/End: Complemental strand, 9457851 - 9457714
Alignment:
Q  235 cggtcacggtcgcgtataagatttcacgatttcggctgttacgggtgctg-gatacagattgca-------cggtgtgaattaatcacaatattgcacaa 326  Q
    |||||| ||||||||||| ||||||||||||||||  |||| ||||| || ||||| ||||||        ||||||||||||||||||| |||||||||    
T  9457851 cggtcaaggtcgcgtataggatttcacgatttcggtcgttatgggtgttgcgatacggattgcggttgttgcggtgtgaattaatcacaacattgcacaa 9457752  T
Q  327 ctcttgaataatgatggtaacgtaaataacttaaacta 364  Q
    ||||| ||||||||| ||||| ||||||||||||||||    
T  9457751 ctcttaaataatgatagtaacttaaataacttaaacta 9457714  T

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Target: chr1; HSP #7
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 235 - 364
Target Start/End: Complemental strand, 9461948 - 9461811
Alignment:
Q  235 cggtcacggtcgcgtataagatttcacgatttcggctgttacgggtgctg-gatacagattgca-------cggtgtgaattaatcacaatattgcacaa 326  Q
    |||||| ||||||||||| ||||||||||||||||  |||| ||||| || ||||| ||||||        ||||||||||||||||||| |||||||||    
T  9461948 cggtcaaggtcgcgtataggatttcacgatttcggtcgttatgggtgttgcgatacggattgcggttgttgcggtgtgaattaatcacaacattgcacaa 9461849  T
Q  327 ctcttgaataatgatggtaacgtaaataacttaaacta 364  Q
    ||||| ||||||||| ||||| ||||||||||||||||    
T  9461848 ctcttaaataatgatagtaacttaaataacttaaacta 9461811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 394 - 501
Target Start/End: Original strand, 42026907 - 42027013
Alignment:
Q  394 agacccactcatttttatgaaggtctattttagcaaccaacaccttttcacttggacacaaagacccttgtttttattttttgggaaaattaaaactgaa 493  Q
    ||||||||||||||| ||||||||||||||||||||||  ||||||||||||||||||||||  |||  |||||| |||||  || |||||||||| |||    
T  42026907 agacccactcattttcatgaaggtctattttagcaacctgcaccttttcacttggacacaaatgcccaagtttttgtttttcagg-aaattaaaacggaa 42027005  T
Q  494 gggtaaaa 501  Q
    ||||||||    
T  42027006 gggtaaaa 42027013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 394 - 501
Target Start/End: Complemental strand, 42031750 - 42031644
Alignment:
Q  394 agacccactcatttttatgaaggtctattttagcaaccaacaccttttcacttggacacaaagacccttgtttttattttttgggaaaattaaaactgaa 493  Q
    ||||||||||||||| ||||||||||||||||||||||  ||||||||||||||||||||||  |||  |||||| |||||  || |||||||||| |||    
T  42031750 agacccactcattttcatgaaggtctattttagcaacctgcaccttttcacttggacacaaatgcccaagtttttgtttttcagg-aaattaaaacggaa 42031652  T
Q  494 gggtaaaa 501  Q
    ||||||||    
T  42031651 gggtaaaa 42031644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 296 - 390
Target Start/End: Complemental strand, 34664946 - 34664852
Alignment:
Q  296 cacggtgtgaattaatcacaatattgcacaactcttgaataatgatggtaacgtaaataacttaaactaaagataaatttggagttctaaactag 390  Q
    |||||| ||||||||| |||| ||||||||||| || ||||||||| |||||||||||||||||||||| ||| | || ||||||||||||||||    
T  34664946 cacggtatgaattaattacaacattgcacaacttttaaataatgatagtaacgtaaataacttaaactatagacagatatggagttctaaactag 34664852  T

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Target: chr1; HSP #11
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 394 - 490
Target Start/End: Original strand, 17238608 - 17238704
Alignment:
Q  394 agacccactcatttttatgaaggtctattttagcaaccaacaccttttcacttggacacaaagacccttgtttttattttttgggaaaattaaaact 490  Q
    ||||||||||||||||||||||||||||||||||||  | |||||||||  ||||||  |||||||| ||||||| |||| |||||||| |||||||    
T  17238608 agacccactcatttttatgaaggtctattttagcaagtagcaccttttcgtttggaccaaaagacccatgtttttgttttctgggaaaactaaaact 17238704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 406 - 487
Target Start/End: Complemental strand, 24790895 - 24790814
Alignment:
Q  406 ttttatgaaggtctattttagcaaccaacaccttttcacttggacacaaagacccttgtttttattttttgggaaaattaaa 487  Q
    ||||||||||||||||||||| || |||||| |||||||||||||||||| |||| | ||||| ||||||||| ||||||||    
T  24790895 ttttatgaaggtctattttagaaagcaacactttttcacttggacacaaaaacccctatttttgttttttgggcaaattaaa 24790814  T

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Target: chr1; HSP #13
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 394 - 476
Target Start/End: Original strand, 16801984 - 16802066
Alignment:
Q  394 agacccactcatttttatgaaggtctattttagcaaccaacaccttttcacttggacacaaagacccttgtttttattttttg 476  Q
    ||||||||||||||| ||||||||||||||||||||    |||||||||||||||||| ||| |||| ||||||| |||||||    
T  16801984 agacccactcattttcatgaaggtctattttagcaaggggcaccttttcacttggacaaaaatacccatgtttttgttttttg 16802066  T

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Target: chr1; HSP #14
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 394 - 476
Target Start/End: Complemental strand, 16802739 - 16802657
Alignment:
Q  394 agacccactcatttttatgaaggtctattttagcaaccaacaccttttcacttggacacaaagacccttgtttttattttttg 476  Q
    |||||||||||||||||| |||||||||||||||||  |  ||||||||||||||||| || ||||| | ||||| |||||||    
T  16802739 agacccactcatttttataaaggtctattttagcaagaagtaccttttcacttggacaaaaggacccatatttttgttttttg 16802657  T

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Target: chr1; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 398 - 489
Target Start/End: Original strand, 34361225 - 34361315
Alignment:
Q  398 ccactcatttttatgaaggtctattttagcaaccaacaccttttcacttggacacaaagacccttgtttttattttttgggaaaattaaaac 489  Q
    ||||| |||||||||||||| |||||||||||||||| |||||| |||||||||  ||||    ||||||| ||||||||||||| ||||||    
T  34361225 ccacttatttttatgaaggtttattttagcaaccaacgccttttgacttggacaagaaga-gtatgtttttgttttttgggaaaactaaaac 34361315  T

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Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 298 - 364
Target Start/End: Original strand, 32617574 - 32617640
Alignment:
Q  298 cggtgtgaattaatcacaatattgcacaactcttgaataatgatggtaacgtaaataacttaaacta 364  Q
    |||||| |||||||||||| |||||||||||||| ||||| ||| ||||| | ||||||||||||||    
T  32617574 cggtgtaaattaatcacaacattgcacaactcttaaataacgatagtaacttgaataacttaaacta 32617640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 100 - 151
Target Start/End: Complemental strand, 35925755 - 35925704
Alignment:
Q  100 tgttcataatctattttcaacttatttccataaactctctatgataggttat 151  Q
    ||||||||| || |||||||||||||||||||||||||| ||||||| ||||    
T  35925755 tgttcataagctgttttcaacttatttccataaactctccatgatagcttat 35925704  T

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Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 63 - 138
Target Start/End: Complemental strand, 6262125 - 6262047
Alignment:
Q  63 tgagactatttggaagatcttatgagaacaactta---cttgttcataatctattttcaacttatttccataaactctc 138  Q
    ||||||| |||  |||| |||||||||||||||||   | ||||||||| |||||||||||||||||||| || |||||    
T  6262125 tgagactgtttacaagagcttatgagaacaacttatgacatgttcataagctattttcaacttatttccacaagctctc 6262047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 113 - 150
Target Start/End: Complemental strand, 33976738 - 33976701
Alignment:
Q  113 ttttcaacttatttccataaactctctatgataggtta 150  Q
    |||||||||||||||||||| ||||||| |||||||||    
T  33976738 ttttcaacttatttccataagctctctaggataggtta 33976701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 398 - 451
Target Start/End: Complemental strand, 47722062 - 47722009
Alignment:
Q  398 ccactcatttttatgaaggtctattttagcaaccaacaccttttcacttggaca 451  Q
    |||| |||||||||||| |  ||||||||||||||||  |||||||||||||||    
T  47722062 ccacacatttttatgaatgagtattttagcaaccaacggcttttcacttggaca 47722009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 398 - 451
Target Start/End: Complemental strand, 47729054 - 47729001
Alignment:
Q  398 ccactcatttttatgaaggtctattttagcaaccaacaccttttcacttggaca 451  Q
    |||| |||||||||||| |  ||||||||||||||||  |||||||||||||||    
T  47729054 ccacacatttttatgaatgagtattttagcaaccaacggcttttcacttggaca 47729001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 104 - 136
Target Start/End: Complemental strand, 3244960 - 3244928
Alignment:
Q  104 cataatctattttcaacttatttccataaactc 136  Q
    ||||| |||||||||||||||||||||||||||    
T  3244960 cataagctattttcaacttatttccataaactc 3244928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 300 - 375
Target Start/End: Original strand, 14081717 - 14081790
Alignment:
Q  300 gtgtgaattaatcacaatattgcacaactcttgaataatgatggtaacgtaaataacttaaactaaagataaattt 375  Q
    ||||| ||||||||||| |||||| |||| || ||||||||  | ||| |||||||||||||||| ||||| ||||    
T  14081717 gtgtgcattaatcacaacattgcataacttttaaataatga--gcaacttaaataacttaaactagagatagattt 14081790  T

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Target: chr7 (Bit Score: 65; Significance: 3e-28; HSPs: 20)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 298 - 390
Target Start/End: Original strand, 25635907 - 25635999
Alignment:
Q  298 cggtgtgaattaatcacaatattgcacaactcttgaataatgatggtaacgtaaataacttaaactaaagataaatttggagttctaaactag 390  Q
    ||||||||||||||||||| |||||||| ||||| |||||||||  ||| ||||||||||||||||||||||| |||||||||||||||||||    
T  25635907 cggtgtgaattaatcacaacattgcacacctcttaaataatgataataatgtaaataacttaaactaaagatagatttggagttctaaactag 25635999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 298 - 390
Target Start/End: Original strand, 39653460 - 39653552
Alignment:
Q  298 cggtgtgaattaatcacaatattgcacaactcttgaataatgatggtaacgtaaataacttaaactaaagataaatttggagttctaaactag 390  Q
    ||||||||||||||||||||||| |||||||||| ||||||||| | |||||||||||||||||||| | ||||| |||||||||||||||||    
T  39653460 cggtgtgaattaatcacaatattccacaactcttaaataatgatagcaacgtaaataacttaaactagatataaagttggagttctaaactag 39653552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 394 - 496
Target Start/End: Complemental strand, 45551862 - 45551760
Alignment:
Q  394 agacccactcatttttatgaaggtctattttagcaaccaacaccttttcacttggacacaaagacccttgtttttattttttgggaaaattaaaactgaa 493  Q
    ||||||||||| ||| |||||||||||||||||||||||||||||||||| || |||| ||||||||||||||||  ||||| ||| || ||||| ||||    
T  45551862 agacccactcaatttcatgaaggtctattttagcaaccaacaccttttcattttgacaaaaagacccttgttttttgttttttggacaaataaaattgaa 45551763  T
Q  494 ggg 496  Q
    |||    
T  45551762 ggg 45551760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 394 - 495
Target Start/End: Original strand, 5995264 - 5995365
Alignment:
Q  394 agacccactcatttttatgaaggtctattttagcaaccaacaccttttcacttggacacaaagacccttgtttttattttttgggaaaattaaaactgaa 493  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||  |||  |||||| ||||||||   ||| |||||||||    
T  5995264 agacccactcattttcatgaaggtctattttagcaaccaacaccttttcatttggacacaaatgcccaagtttttgttttttggaccaatcaaaactgaa 5995363  T
Q  494 gg 495  Q
    ||    
T  5995364 gg 5995365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 394 - 475
Target Start/End: Original strand, 41970899 - 41970980
Alignment:
Q  394 agacccactcatttttatgaaggtctattttagcaaccaacaccttttcacttggacacaaagacccttgtttttatttttt 475  Q
    ||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||  || |||||||||||| ||||||    
T  41970899 agacccactcattttcatgaagatctattttagcaaccaacaccttttcacttggacaagaatacccttgtttttgtttttt 41970980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 394 - 495
Target Start/End: Original strand, 45551009 - 45551110
Alignment:
Q  394 agacccactcatttttatgaaggtctattttagcaaccaacaccttttcacttggacacaaagacccttgtttttattttttgggaaaattaaaactgaa 493  Q
    ||||||||||| ||| |||||||||||||||||||||||||||||||||| || |||| |||||||||| |||||  ||||| | |||||||||||| ||    
T  45551009 agacccactcaatttcatgaaggtctattttagcaaccaacaccttttcattttgacaaaaagacccttattttttgttttttgtaaaattaaaactaaa 45551108  T
Q  494 gg 495  Q
    ||    
T  45551109 gg 45551110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 298 - 364
Target Start/End: Original strand, 10493373 - 10493439
Alignment:
Q  298 cggtgtgaattaatcacaatattgcacaactcttgaataatgatggtaacgtaaataacttaaacta 364  Q
    ||||||||||||||||||| |||||||||||||| ||||||||| ||||||||||||||||||||||    
T  10493373 cggtgtgaattaatcacaacattgcacaactcttaaataatgatagtaacgtaaataacttaaacta 10493439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 398 - 475
Target Start/End: Complemental strand, 27268295 - 27268218
Alignment:
Q  398 ccactcatttttatgaaggtctattttagcaaccaacaccttttcacttggacacaaagacccttgtttttatttttt 475  Q
    ||||||||||| |||||||||||||||||||| || |||||||||||||||||| ||||||| || ||||||||||||    
T  27268295 ccactcattttcatgaaggtctattttagcaatcagcaccttttcacttggacataaagacctttatttttatttttt 27268218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 394 - 451
Target Start/End: Complemental strand, 5997668 - 5997611
Alignment:
Q  394 agacccactcatttttatgaaggtctattttagcaaccaacaccttttcacttggaca 451  Q
    ||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  5997668 agacccactcattttcatgaaggtctattttagcaaccagcaccttttcacttggaca 5997611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 296 - 369
Target Start/End: Original strand, 7493065 - 7493138
Alignment:
Q  296 cacggtgtgaattaatcacaatattgcacaactcttgaataatgatggtaacgtaaataacttaaactaaagat 369  Q
    ||||||||||||||||||||| ||| |||||||||| ||||||||| ||||||||||||| |||||||| ||||    
T  7493065 cacggtgtgaattaatcacaacattacacaactcttaaataatgatagtaacgtaaataatttaaactagagat 7493138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 398 - 474
Target Start/End: Complemental strand, 27258161 - 27258084
Alignment:
Q  398 ccactcatttttatgaagg-tctattttagcaaccaacaccttttcacttggacacaaagacccttgtttttattttt 474  Q
    ||||||||||| ||||||| ||||||||||||| ||||||||||||||||||||| |||||||||| ||||| |||||    
T  27258161 ccactcattttcatgaagggtctattttagcaatcaacaccttttcacttggacataaagacccttattttttttttt 27258084  T

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Target: chr7; HSP #12
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 299 - 390
Target Start/End: Original strand, 47363708 - 47363799
Alignment:
Q  299 ggtgtgaattaatcacaatattgcacaactcttgaataatgatggtaacgtaaataacttaaactaaagataaatttggagttctaaactag 390  Q
    ||||||||||||||| || ||||||||| |||| |||||||||  |||| |||||||||||||||| ||| | ||||| |||||||||||||    
T  47363708 ggtgtgaattaatcaaaacattgcacaagtcttaaataatgataataacttaaataacttaaactagagaaagatttgaagttctaaactag 47363799  T

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Target: chr7; HSP #13
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 415 - 487
Target Start/End: Complemental strand, 7834977 - 7834905
Alignment:
Q  415 ggtctattttagcaaccaacaccttttcacttggacacaaagacccttgtttttattttttgggaaaattaaa 487  Q
    ||||||||||| ||| ||| ||||||||||||||| ||||  ||||||| |||||||||||||| ||||||||    
T  7834977 ggtctattttaacaagcaaaaccttttcacttggatacaagaacccttgcttttattttttgggcaaattaaa 7834905  T

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Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 394 - 450
Target Start/End: Original strand, 1409387 - 1409443
Alignment:
Q  394 agacccactcatttttatgaaggtctattttagcaaccaacaccttttcacttggac 450  Q
    ||||||||||||||||||||||||||||||||||||    ||||||||| |||||||    
T  1409387 agacccactcatttttatgaaggtctattttagcaaggtgcaccttttctcttggac 1409443  T

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Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 298 - 383
Target Start/End: Complemental strand, 45435590 - 45435503
Alignment:
Q  298 cggtgtgaattaatcacaatattgcacaactcttgaataatgatggtaacgtaa--ataacttaaactaaagataaatttggagttct 383  Q
    |||||||||||||| ||||||||||||||||||| |||||| || |||| | ||  |||||||||| |  ||||||||||| ||||||    
T  45435590 cggtgtgaattaataacaatattgcacaactcttaaataataatagtaatggaaatataacttaaattggagataaatttgaagttct 45435503  T

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Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 394 - 441
Target Start/End: Complemental strand, 28778156 - 28778109
Alignment:
Q  394 agacccactcatttttatgaaggtctattttagcaaccaacacctttt 441  Q
    ||||||||||||||| || ||||||||||||||| |||||||||||||    
T  28778156 agacccactcattttcatcaaggtctattttagcgaccaacacctttt 28778109  T

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Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 100 - 152
Target Start/End: Complemental strand, 28165156 - 28165104
Alignment:
Q  100 tgttcataatctattttcaacttatttccataaactctctatgataggttata 152  Q
    ||||||||| || |||||||||||||||||||| ||||| ||||||| |||||    
T  28165156 tgttcataagctgttttcaacttatttccataagctctccatgatagcttata 28165104  T

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Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 299 - 390
Target Start/End: Complemental strand, 33049291 - 33049200
Alignment:
Q  299 ggtgtgaattaatcacaatattgcacaactcttgaataatg-atggtaacgtaaataacttaaactaaagataaatttggagttctaaactag 390  Q
    ||||||||||||||| || |||||||||||||| ||||||| ||  |||| |||||||||| || || ||||| ||||| |||| ||||||||    
T  33049291 ggtgtgaattaatcaaaacattgcacaactcttaaataatgtataataacttaaataacttgaaatagagatagatttgaagtt-taaactag 33049200  T

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Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 300 - 381
Target Start/End: Complemental strand, 31743053 - 31742971
Alignment:
Q  300 gtgtgaattaatcacaatattgcacaactcttgaataatg-atggtaacgtaaataacttaaactaaagataaatttggagtt 381  Q
    ||||||||||||||||| ||||||||  |||| ||||||| ||  |||| ||||||||||||| || ||||| ||||| ||||    
T  31743053 gtgtgaattaatcacaacattgcacagttcttaaataatgtataataacttaaataacttaaattagagatagatttgaagtt 31742971  T

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Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 63 - 146
Target Start/End: Original strand, 2825201 - 2825282
Alignment:
Q  63 tgagactatttggaagatcttatgagaacaacttacttgttcataatctattttcaacttatttccataaactctctatgatag 146  Q
    ||||||| ||||||||| ||||||| | || ||||  |||||||||  |||||||| |||||||||||||  |||||| |||||    
T  2825201 tgagactctttggaagaacttatgaaaccatctta--tgttcataagttattttcagcttatttccataagttctctaggatag 2825282  T

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Target: scaffold0015 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 394 - 446
Target Start/End: Original strand, 45344 - 45396
Alignment:
Q  394 agacccactcatttttatgaaggtctattttagcaaccaacaccttttcactt 446  Q
    ||||||||||||||| ||||||||||||||||||||    |||||||||||||    
T  45344 agacccactcattttcatgaaggtctattttagcaagatgcaccttttcactt 45396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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