View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20436_high_22 (Length: 239)
Name: NF20436_high_22
Description: NF20436
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20436_high_22 |
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Alignment Details
Target: chr2 (Bit Score: 222; Significance: 1e-122; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 34613117 - 34613342
Alignment:
| Q |
1 |
ccagaacgattacatgatagtatttcctctttacgtcaaggtaatacttctgttattgattattatactcaattgaagagtttttgggaagaagtggagc |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34613117 |
ccagaacgattacatgatagtatttcctctttacgtcaaggtaatacttctgttattgattattatactcaattgaagagtttttgggaagaagtggagc |
34613216 |
T |
|
| Q |
101 |
attatcatcccctatggcagtgtgtttgttgcatttgtaaggctaaagaatttcatttagaggattatttgattcgttttcttactggattaaacgacca |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
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| T |
34613217 |
attatcatcccctatggcagtgtgtttgttgcatttgtaaggctaaagaatttcatttagaggattatttgattcgttttcttactggattaaacggcca |
34613316 |
T |
|
| Q |
201 |
attcagtcatgttcgttctcaggttc |
226 |
Q |
| |
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|||||||||||||||||||||||||| |
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| T |
34613317 |
attcagtcatgttcgttctcaggttc |
34613342 |
T |
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