View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20437_high_18 (Length: 422)
Name: NF20437_high_18
Description: NF20437
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20437_high_18 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 413; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 413; E-Value: 0
Query Start/End: Original strand, 10 - 422
Target Start/End: Original strand, 36568074 - 36568486
Alignment:
| Q |
10 |
caccacaacaacaataaccatacctttttccactatcatcatcatatttcctcttcttcaccaccttctcctcctctaagagaagaactacctcttttaa |
109 |
Q |
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| T |
36568074 |
caccacaacaacaataaccatacctttttccactatcatcatcatatttcctcttcttcaccaccttctcctcctctaagagaagaactacctcttttaa |
36568173 |
T |
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| Q |
110 |
acctaattccaacaaaacaagaaaaatatgatgaagatcaacaagaacatgaggtggatattcaagaccttccttgcactgccatggatttagaagaaag |
209 |
Q |
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| T |
36568174 |
acctaattccaacaaaacaagaaaaatatgatgaagatcaacaagaacatgaggtggatattcaagaccttccttgcactgccatggatttagaagaaag |
36568273 |
T |
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| Q |
210 |
ggaagaagatggtagtagtagaactactactgttactgttgcacttcacataggtttgccaaaccctagtgctgctgaaatggcttctgtactttcttcc |
309 |
Q |
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| T |
36568274 |
ggaagaagatggtagtagtagaactactactgttactgttgcacttcacataggtttgccaaaccctagtgctgctgaaatggcttctgtactttcttcc |
36568373 |
T |
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| Q |
310 |
tctaataactcctcagagatcattgtcactgataaagaacatggtggtgaggattcttgttcaggattcatggttaataataggcttaacaaaggacaat |
409 |
Q |
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| T |
36568374 |
tctaataactcctcagagatcattgtcactgataaagaacatggtggtgaggattcttgttcaggattcatggttaataataggcttaacaaaggacaat |
36568473 |
T |
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| Q |
410 |
attggatccctac |
422 |
Q |
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| T |
36568474 |
attggatccctac |
36568486 |
T |
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