View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20437_high_5 (Length: 584)

Name: NF20437_high_5
Description: NF20437
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20437_high_5
NF20437_high_5
[»] chr8 (53 HSPs)
chr8 (19-352)||(38436379-38436717)
chr8 (459-544)||(20091611-20091696)
chr8 (459-544)||(34665551-34665636)
chr8 (459-544)||(10044518-10044603)
chr8 (459-544)||(14129029-14129114)
chr8 (459-544)||(17841660-17841745)
chr8 (459-544)||(24211182-24211267)
chr8 (459-544)||(26041923-26042008)
chr8 (459-544)||(37985866-37985951)
chr8 (459-544)||(40779939-40780024)
chr8 (459-536)||(1503653-1503730)
chr8 (459-544)||(1645774-1645859)
chr8 (459-544)||(6108043-6108128)
chr8 (459-544)||(15187730-15187815)
chr8 (461-544)||(30055686-30055769)
chr8 (459-544)||(3596851-3596936)
chr8 (459-544)||(25581049-25581134)
chr8 (459-544)||(32064916-32065001)
chr8 (459-544)||(42754852-42754937)
chr8 (459-544)||(35353211-35353296)
chr8 (459-543)||(38017103-38017188)
chr8 (459-544)||(39772612-39772697)
chr8 (469-544)||(8454003-8454078)
chr8 (459-532)||(31347586-31347659)
chr8 (459-544)||(32394027-32394111)
chr8 (459-543)||(37132490-37132575)
chr8 (475-544)||(41819594-41819663)
chr8 (459-540)||(3890424-3890506)
chr8 (475-534)||(7022159-7022218)
chr8 (459-544)||(24844670-24844756)
chr8 (459-524)||(30834865-30834931)
chr8 (459-520)||(27782105-27782167)
chr8 (459-520)||(32064760-32064822)
chr8 (459-520)||(34665397-34665459)
chr8 (459-520)||(42755030-42755092)
chr8 (483-520)||(25581227-25581264)
chr8 (484-541)||(27835288-27835345)
chr8 (475-520)||(31347770-31347815)
chr8 (459-506)||(1886621-1886669)
chr8 (459-534)||(7017668-7017743)
chr8 (475-513)||(3890611-3890649)
chr8 (474-520)||(7017853-7017899)
chr8 (459-520)||(7021993-7022055)
chr8 (459-520)||(17841838-17841900)
chr8 (459-520)||(20091789-20091851)
chr8 (459-520)||(40780117-40780179)
chr8 (475-520)||(3597029-3597074)
chr8 (475-520)||(15972865-15972910)
chr8 (459-520)||(30835035-30835096)
chr8 (459-511)||(38016986-38017039)
chr8 (367-396)||(38436733-38436762)
chr8 (483-520)||(39772789-39772826)
chr8 (461-520)||(26042104-26042164)
[»] chr5 (30 HSPs)
chr5 (459-544)||(8145543-8145628)
chr5 (459-544)||(4892372-4892457)
chr5 (459-544)||(33584139-33584224)
chr5 (461-544)||(14138837-14138920)
chr5 (459-544)||(3521817-3521902)
chr5 (459-544)||(6043322-6043407)
chr5 (459-544)||(12850972-12851057)
chr5 (459-544)||(25398408-25398493)
chr5 (459-544)||(37321603-37321688)
chr5 (459-544)||(12614547-12614633)
chr5 (459-544)||(2477806-2477891)
chr5 (459-544)||(3362949-3363034)
chr5 (465-544)||(11360947-11361026)
chr5 (459-544)||(38899535-38899621)
chr5 (459-534)||(22912867-22912942)
chr5 (486-544)||(4433845-4433903)
chr5 (459-534)||(17545492-17545567)
chr5 (461-541)||(27481995-27482077)
chr5 (475-544)||(31640767-31640836)
chr5 (481-536)||(13664737-13664792)
chr5 (459-520)||(8145390-8145452)
chr5 (459-520)||(12614721-12614783)
chr5 (459-520)||(22913042-22913104)
chr5 (459-515)||(10458412-10458469)
chr5 (475-520)||(17545673-17545718)
chr5 (475-520)||(31640928-31640973)
chr5 (459-520)||(2477651-2477713)
chr5 (459-520)||(6043499-6043561)
chr5 (459-520)||(11361119-11361181)
chr5 (484-544)||(36880148-36880213)
[»] chr3 (39 HSPs)
chr3 (459-544)||(30385570-30385655)
chr3 (459-544)||(3137224-3137309)
chr3 (459-544)||(8320392-8320477)
chr3 (459-544)||(22426155-22426240)
chr3 (459-544)||(33113964-33114049)
chr3 (459-544)||(34482698-34482783)
chr3 (459-544)||(37216863-37216948)
chr3 (459-544)||(3089589-3089674)
chr3 (459-536)||(6042055-6042132)
chr3 (459-544)||(19650710-19650795)
chr3 (459-544)||(33145882-33145967)
chr3 (459-544)||(47738281-47738367)
chr3 (459-544)||(2754889-2754974)
chr3 (459-544)||(3456234-3456319)
chr3 (459-544)||(3574336-3574421)
chr3 (459-544)||(37522223-37522308)
chr3 (459-544)||(26612916-26613002)
chr3 (459-544)||(33839705-33839791)
chr3 (459-544)||(36864842-36864928)
chr3 (459-536)||(48161084-48161161)
chr3 (459-541)||(40328004-40328087)
chr3 (461-544)||(42921295-42921379)
chr3 (459-534)||(8361849-8361924)
chr3 (459-534)||(9796839-9796914)
chr3 (459-543)||(24343720-24343805)
chr3 (484-544)||(42298032-42298092)
chr3 (459-534)||(41224414-41224489)
chr3 (459-541)||(41883031-41883114)
chr3 (459-536)||(46919072-46919150)
chr3 (459-520)||(2754732-2754794)
chr3 (459-520)||(9797017-9797079)
chr3 (459-520)||(47738120-47738182)
chr3 (475-520)||(8362033-8362078)
chr3 (459-520)||(3137402-3137464)
chr3 (459-520)||(3574515-3574577)
chr3 (459-520)||(6041899-6041961)
chr3 (459-520)||(33145728-33145789)
chr3 (475-520)||(41883211-41883256)
chr3 (461-520)||(19650888-19650948)
[»] chr7 (28 HSPs)
chr7 (461-544)||(45637881-45637964)
chr7 (459-544)||(4974545-4974630)
chr7 (459-544)||(24395141-24395226)
chr7 (459-544)||(34483008-34483093)
chr7 (459-544)||(3962148-3962233)
chr7 (461-544)||(15329444-15329527)
chr7 (459-541)||(15577657-15577739)
chr7 (459-544)||(30848739-30848824)
chr7 (459-544)||(35445567-35445652)
chr7 (459-544)||(42611981-42612066)
chr7 (459-544)||(48880737-48880822)
chr7 (459-528)||(25167666-25167735)
chr7 (459-544)||(35876414-35876499)
chr7 (459-544)||(29737314-29737400)
chr7 (459-544)||(42696253-42696339)
chr7 (459-534)||(37476890-37476965)
chr7 (463-541)||(20009912-20009991)
chr7 (475-534)||(18037157-18037216)
chr7 (459-534)||(15238564-15238639)
chr7 (459-520)||(4974723-4974785)
chr7 (459-520)||(42611826-42611888)
chr7 (459-520)||(45637727-45637789)
chr7 (475-520)||(15238414-15238459)
chr7 (459-517)||(15577841-15577900)
chr7 (459-520)||(15329288-15329350)
chr7 (459-520)||(34482850-34482912)
chr7 (459-520)||(48880915-48880977)
chr7 (483-520)||(35444598-35444635)
[»] scaffold0228 (6 HSPs)
scaffold0228 (459-544)||(26106-26191)
scaffold0228 (459-544)||(16154-16239)
scaffold0228 (459-520)||(8417-8479)
scaffold0228 (459-520)||(15999-16061)
scaffold0228 (459-520)||(25951-26013)
scaffold0228 (511-544)||(8572-8605)
[»] chr6 (27 HSPs)
chr6 (459-544)||(17175831-17175916)
chr6 (459-544)||(28675318-28675403)
chr6 (459-544)||(33696867-33696952)
chr6 (465-544)||(2309239-2309318)
chr6 (459-544)||(17705279-17705363)
chr6 (459-544)||(18365384-18365469)
chr6 (459-544)||(18370648-18370733)
chr6 (459-541)||(6031550-6031632)
chr6 (459-544)||(23290891-23290976)
chr6 (459-544)||(32702375-32702460)
chr6 (459-544)||(33695136-33695221)
chr6 (475-544)||(18889470-18889539)
chr6 (459-534)||(11548399-11548474)
chr6 (459-544)||(29693615-29693701)
chr6 (485-544)||(6127447-6127506)
chr6 (459-510)||(34238897-34238948)
chr6 (478-544)||(8515556-8515622)
chr6 (459-520)||(33695315-33695377)
chr6 (459-520)||(33696711-33696773)
chr6 (475-520)||(11548576-11548621)
chr6 (512-544)||(9752109-9752141)
chr6 (459-520)||(6127290-6127352)
chr6 (459-520)||(23291072-23291134)
chr6 (459-522)||(582537-582602)
chr6 (475-520)||(9752233-9752278)
chr6 (459-510)||(8515723-8515775)
chr6 (459-510)||(25986945-25986997)
[»] chr4 (48 HSPs)
chr4 (459-544)||(22199429-22199514)
chr4 (459-544)||(36073519-36073604)
chr4 (459-544)||(46442014-46442099)
chr4 (459-534)||(10442597-10442672)
chr4 (459-544)||(2625007-2625092)
chr4 (459-544)||(9089040-9089125)
chr4 (459-544)||(21802130-21802215)
chr4 (459-544)||(44893023-44893108)
chr4 (459-544)||(44893596-44893681)
chr4 (459-544)||(49387697-49387782)
chr4 (459-544)||(53123201-53123286)
chr4 (459-536)||(7744922-7744999)
chr4 (459-544)||(33530494-33530579)
chr4 (459-544)||(36073121-36073206)
chr4 (459-544)||(47290236-47290321)
chr4 (459-544)||(4751617-4751702)
chr4 (459-544)||(23964274-23964359)
chr4 (459-544)||(24128409-24128494)
chr4 (459-544)||(31078629-31078714)
chr4 (459-544)||(50156389-50156473)
chr4 (461-544)||(17655600-17655684)
chr4 (459-544)||(37219801-37219887)
chr4 (475-544)||(30563379-30563448)
chr4 (459-541)||(11314061-11314144)
chr4 (466-544)||(37934758-37934837)
chr4 (459-542)||(42671840-42671924)
chr4 (459-534)||(24392854-24392929)
chr4 (459-520)||(33530676-33530738)
chr4 (459-510)||(25063384-25063436)
chr4 (479-539)||(44744607-44744667)
chr4 (459-520)||(10442777-10442839)
chr4 (459-520)||(31078807-31078869)
chr4 (459-520)||(36073731-36073793)
chr4 (459-520)||(49387876-49387938)
chr4 (464-536)||(36073276-36073349)
chr4 (469-520)||(46441870-46441921)
chr4 (459-520)||(2624852-2624914)
chr4 (459-520)||(7745100-7745162)
chr4 (474-520)||(17655461-17655507)
chr4 (459-520)||(21802310-21802372)
chr4 (459-520)||(22199276-22199338)
chr4 (459-520)||(24392682-24392744)
chr4 (459-520)||(36072962-36073024)
chr4 (459-520)||(47290081-47290143)
chr4 (483-520)||(9088910-9088947)
chr4 (483-520)||(44893201-44893238)
chr4 (483-520)||(44893466-44893503)
chr4 (483-520)||(53123071-53123108)
[»] chr2 (29 HSPs)
chr2 (459-544)||(33380377-33380462)
chr2 (459-544)||(35160929-35161014)
chr2 (459-544)||(9293385-9293470)
chr2 (459-544)||(10662058-10662143)
chr2 (459-544)||(13355018-13355103)
chr2 (459-544)||(23267872-23267957)
chr2 (459-544)||(3989246-3989331)
chr2 (459-544)||(7475318-7475403)
chr2 (459-544)||(31174645-31174730)
chr2 (459-534)||(43331092-43331167)
chr2 (475-544)||(16767288-16767357)
chr2 (459-544)||(22592880-22592968)
chr2 (475-544)||(21936252-21936321)
chr2 (483-534)||(34320991-34321042)
chr2 (459-544)||(9723576-9723662)
chr2 (459-534)||(21393496-21393570)
chr2 (459-520)||(14941354-14941416)
chr2 (465-534)||(37335824-37335894)
chr2 (484-544)||(14941199-14941259)
chr2 (474-519)||(37335744-37335789)
chr2 (461-520)||(27847649-27847709)
chr2 (459-520)||(9293564-9293626)
chr2 (459-520)||(31174822-31174884)
chr2 (459-520)||(10661902-10661964)
chr2 (459-520)||(21936096-21936158)
chr2 (459-520)||(23268050-23268112)
chr2 (459-520)||(35160772-35160834)
chr2 (482-520)||(43330951-43330989)
chr2 (461-520)||(9723422-9723482)
[»] chr1 (31 HSPs)
chr1 (459-544)||(19015574-19015659)
chr1 (459-544)||(20304940-20305025)
chr1 (459-536)||(40215166-40215243)
chr1 (459-544)||(51737675-51737760)
chr1 (459-544)||(18404618-18404703)
chr1 (459-544)||(25463846-25463931)
chr1 (459-544)||(36966518-36966603)
chr1 (459-544)||(37821644-37821729)
chr1 (459-544)||(41876252-41876337)
chr1 (459-544)||(6883657-6883742)
chr1 (459-544)||(9910101-9910186)
chr1 (459-544)||(25973577-25973662)
chr1 (459-544)||(44094867-44094952)
chr1 (459-544)||(3559787-3559872)
chr1 (459-534)||(32000076-32000151)
chr1 (459-534)||(33786441-33786516)
chr1 (459-520)||(19722909-19722970)
chr1 (459-534)||(40273888-40273963)
chr1 (459-541)||(44690831-44690914)
chr1 (459-520)||(33786623-33786684)
chr1 (481-544)||(52329445-52329508)
chr1 (459-544)||(27523065-27523151)
chr1 (461-536)||(10167577-10167653)
chr1 (459-520)||(16045786-16045848)
chr1 (459-520)||(40215003-40215065)
chr1 (469-520)||(6883513-6883564)
chr1 (459-520)||(18404457-18404519)
chr1 (459-520)||(25463691-25463753)
chr1 (459-520)||(40273717-40273779)
chr1 (459-520)||(44094713-44094775)
chr1 (459-516)||(52064387-52064445)
[»] scaffold0178 (2 HSPs)
scaffold0178 (459-544)||(11791-11876)
scaffold0178 (459-520)||(11636-11698)
[»] scaffold0085 (2 HSPs)
scaffold0085 (459-544)||(48019-48104)
scaffold0085 (459-520)||(47865-47927)
[»] scaffold0204 (1 HSPs)
scaffold0204 (459-544)||(4566-4651)
[»] scaffold0096 (2 HSPs)
scaffold0096 (459-544)||(41180-41265)
scaffold0096 (459-520)||(41026-41088)
[»] scaffold0471 (1 HSPs)
scaffold0471 (459-544)||(13012-13097)


Alignment Details
Target: chr8 (Bit Score: 273; Significance: 1e-152; HSPs: 53)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 273; E-Value: 1e-152
Query Start/End: Original strand, 19 - 352
Target Start/End: Original strand, 38436379 - 38436717
Alignment:
Q  19 agtttagattcagtagtatttgaaatcagttattataagacaaggaagcgataatgagaccttggagtgaaaacggcagaaacttggtgtgt-cgtttgt 117  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  38436379 agtttagattcaatagtatttgaaatcagttattataagacaaggaagcgataatgagaccttggagtgaaaacggcagaaacttggtgtgttcgtttgt 38436478  T
Q  118 taagttagggtttatggaggggttaacgtcactgctatagt---aggttaagcttaaattttcccaacatcttttacatttatttatttacacacta-ta 213  Q
    |||||||||||||||||||||||| ||||||||||||||||   |||||||||||||||||||| |||||||||||||||||||||||||||||||| ||    
T  38436479 taagttagggtttatggaggggtttacgtcactgctatagtgctaggttaagcttaaattttcctaacatcttttacatttatttatttacacactacta 38436578  T
Q  214 gccccttatttatttacacactggcccctagtaattcaaataataatttttgggtggacacgagaattttggaccttctatccgatcacgtcctttatgt 313  Q
    ||||||||||||||||||||| ||||| ||||| |||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  38436579 gccccttatttatttacacaccggcccttagtacttcacataataatttttgggtggacacgagaattttggaccttctatccggtcacgtcctttatgt 38436678  T
Q  314 gtgtgatcaaatagagagtttaaatctttgtgtatatct 352  Q
    ||||||||||||||||||||||||||||||| |||||||    
T  38436679 gtgtgatcaaatagagagtttaaatctttgtatatatct 38436717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 459 - 544
Target Start/End: Original strand, 20091611 - 20091696
Alignment:
Q  459 tcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaacctttcat 544  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  20091611 tcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacccttagatttcagtctcatttattaacctttcat 20091696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 459 - 544
Target Start/End: Complemental strand, 34665636 - 34665551
Alignment:
Q  459 tcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaacctttcat 544  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  34665636 tcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacccttagatttcagtctcatttattaacctttcat 34665551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 459 - 544
Target Start/End: Complemental strand, 10044603 - 10044518
Alignment:
Q  459 tcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaacctttcat 544  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||    
T  10044603 tcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcaatctcatttattaatctttcat 10044518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 459 - 544
Target Start/End: Complemental strand, 14129114 - 14129029
Alignment:
Q  459 tcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaacctttcat 544  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  14129114 tcaagaatgattttataagaaatattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcat 14129029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 459 - 544
Target Start/End: Original strand, 17841660 - 17841745
Alignment:
Q  459 tcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaacctttcat 544  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  17841660 tcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcat 17841745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 459 - 544
Target Start/End: Original strand, 24211182 - 24211267
Alignment:
Q  459 tcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaacctttcat 544  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  24211182 tcaagaatgattttataagaaagatccaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcat 24211267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 459 - 544
Target Start/End: Original strand, 26041923 - 26042008
Alignment:
Q  459 tcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaacctttcat 544  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  26041923 tcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcat 26042008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 459 - 544
Target Start/End: Original strand, 37985866 - 37985951
Alignment:
Q  459 tcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaacctttcat 544  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||    
T  37985866 tcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtcccatttattaatctttcat 37985951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 459 - 544
Target Start/End: Original strand, 40779939 - 40780024
Alignment:
Q  459 tcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaacctttcat 544  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  40779939 tcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcat 40780024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 459 - 536
Target Start/End: Original strand, 1503653 - 1503730
Alignment:
Q  459 tcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaa 536  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1503653 tcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaa 1503730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 459 - 544
Target Start/End: Original strand, 1645774 - 1645859
Alignment:
Q  459 tcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaacctttcat 544  Q
    ||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  1645774 tcaagaatgattttataagaaagaaccaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcat 1645859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 459 - 544
Target Start/End: Original strand, 6108043 - 6108128
Alignment:
Q  459 tcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaacctttcat 544  Q
    |||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||    
T  6108043 tcaagaatgattttataagaaaaattcaagaatgacatgacacaataatcacctttagatttcagtctcatttattaatctttcat 6108128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 459 - 544
Target Start/End: Complemental strand, 15187815 - 15187730
Alignment:
Q  459 tcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaacctttcat 544  Q
    ||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||    
T  15187815 tcaagaatgattttataagaaagatccaagaatgacatagcacaataatcacctttagatttcagtctcatttattaatctttcat 15187730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 461 - 544
Target Start/End: Complemental strand, 30055769 - 30055686
Alignment:
Q  461 aagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaacctttcat 544  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||| |||||||||||||||||||||||    
T  30055769 aagaatgattttataagaaagattcaagaatgacatgacacaataatcacccttagattttagtctcatttattaacctttcat 30055686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 459 - 544
Target Start/End: Original strand, 3596851 - 3596936
Alignment:
Q  459 tcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaacctttcat 544  Q
    |||||||||||||||||||||| ||| |||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||    
T  3596851 tcaagaatgattttataagaaaaatttaagaatgatatggcacaataatcacctttagatttcagtctcatttattaatctttcat 3596936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 459 - 544
Target Start/End: Original strand, 25581049 - 25581134
Alignment:
Q  459 tcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaacctttcat 544  Q
    |||||||||||||||||||||| |||||||||||||||  |||||||||||||||||||||||||||||||||||||| |||||||    
T  25581049 tcaagaatgattttataagaaaaattcaagaatgacataacacaataatcacctttagatttcagtctcatttattaatctttcat 25581134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 459 - 544
Target Start/End: Complemental strand, 32065001 - 32064916
Alignment:
Q  459 tcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaacctttcat 544  Q
    |||||||||||||||||||||| ||| |||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||    
T  32065001 tcaagaatgattttataagaaaaatttaagaatgacatgacacaataatcacctttagatttcagtctcatttattaatctttcat 32064916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 459 - 544
Target Start/End: Original strand, 42754852 - 42754937
Alignment:
Q  459 tcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaacctttcat 544  Q
    |||||||||||||||||||||| ||| ||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||    
T  42754852 tcaagaatgattttataagaaaaatttaagaatgacatggtacaataatcacctttagatttcagtctcatttattaatctttcat 42754937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 459 - 544
Target Start/End: Complemental strand, 35353296 - 35353211
Alignment:
Q  459 tcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaacctttcat 544  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||| | ||||||||||||| |||||||    
T  35353296 tcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttaaattttaatctcatttattaatctttcat 35353211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 459 - 543
Target Start/End: Complemental strand, 38017188 - 38017103
Alignment:
Q  459 tcaagaatgattttataagaaagattcaagaatgacatggcacaataa-tcacctttagatttcagtctcatttattaacctttca 543  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||| | |||||||||||||||||||||||||||| ||||||    
T  38017188 tcaagaatgattttataagaaagattcaagaatgacatgacacaataatttacctttagatttcagtctcatttattaatctttca 38017103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 459 - 544
Target Start/End: Original strand, 39772612 - 39772697
Alignment:
Q  459 tcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaacctttcat 544  Q
    ||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||| || |||||||| |||||||    
T  39772612 tcaagaatgattttataagaaagatccaagaatgacatgacacaataatcacctttagatttcagtttcgtttattaatctttcat 39772697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 469 - 544
Target Start/End: Complemental strand, 8454078 - 8454003
Alignment:
Q  469 ttttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaacctttcat 544  Q
    |||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  8454078 ttttataagaagaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcat 8454003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 459 - 532
Target Start/End: Original strand, 31347586 - 31347659
Alignment:
Q  459 tcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcattta 532  Q
    |||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31347586 tcaagaatgatttatcaagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcattta 31347659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 459 - 544
Target Start/End: Complemental strand, 32394111 - 32394027
Alignment:
Q  459 tcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaacctttcat 544  Q
    |||||||||||||||||| ||| ||| |||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||    
T  32394111 tcaagaatgattttataaaaaatatttaagaatgacatg-cacaataatcacctttagatttcagtctcatttattaatctttcat 32394027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 459 - 543
Target Start/End: Original strand, 37132490 - 37132575
Alignment:
Q  459 tcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaacctttca 543  Q
    |||||||||||||||| |||||||||||| |||||||||| ||||||||||||| |||||||||||||| ||||||||||||||||    
T  37132490 tcaagaatgattttatcaagaaagattcatgaatgacatgacacaataatcacccttagatttcagtcttatttattaacctttca 37132575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 475 - 544
Target Start/End: Original strand, 41819594 - 41819663
Alignment:
Q  475 aagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaacctttcat 544  Q
    ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||| ||||    
T  41819594 aagaaagattcaagaatgacatgacacaataatcacccttagatttcagtctcatttattaacctatcat 41819663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 459 - 540
Target Start/End: Original strand, 3890424 - 3890506
Alignment:
Q  459 tcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaacctt 540  Q
    |||||||||||||||| ||||||||||||||||||| |||||| |||||||||| |||||||| | ||| |||||||||||||    
T  3890424 tcaagaatgattttatcaagaaagattcaagaatgatatggcagaataatcaccattagattttaatcttatttattaacctt 3890506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 475 - 534
Target Start/End: Complemental strand, 7022218 - 7022159
Alignment:
Q  475 aagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttatt 534  Q
    ||||||||||||||||||||| | |||||||||| || ||||||||||||||||||||||    
T  7022218 aagaaagattcaagaatgacaagtcacaataatcgcccttagatttcagtctcatttatt 7022159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 459 - 544
Target Start/End: Original strand, 24844670 - 24844756
Alignment:
Q  459 tcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaacctttcat 544  Q
    |||| ||||||||||| |||||||||| ||||||| ||||||| |||||||||  |||||||| | ||| | |||||||||||||||    
T  24844670 tcaataatgattttatcaagaaagatttaagaatggcatggcaaaataatcactcttagattttaatcttaattattaacctttcat 24844756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 459 - 524
Target Start/End: Original strand, 30834865 - 30834931
Alignment:
Q  459 tcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagatttcagt 524  Q
    |||||||||||||||| |||||||||| |||||||||||| || ||||| |||| ||||||||||||    
T  30834865 tcaagaatgattttatcaagaaagattaaagaatgacatgacagaataaccacccttagatttcagt 30834931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 459 - 520
Target Start/End: Complemental strand, 27782167 - 27782105
Alignment:
Q  459 tcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagattt 520  Q
    |||||||  ||||||| ||||||||||||| |||||||||||| |||||||||| ||||||||    
T  27782167 tcaagaaatattttatcaagaaagattcaataatgacatggcagaataatcacccttagattt 27782105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 459 - 520
Target Start/End: Original strand, 32064760 - 32064822
Alignment:
Q  459 tcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagattt 520  Q
    ||||||| |||||||| ||||||  |||||||||||||||||| |||||||||| ||||||||    
T  32064760 tcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 32064822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 459 - 520
Target Start/End: Original strand, 34665397 - 34665459
Alignment:
Q  459 tcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagattt 520  Q
    ||||||| |||||||| ||||||  |||||||||||||||||| |||||||||| ||||||||    
T  34665397 tcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 34665459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 459 - 520
Target Start/End: Complemental strand, 42755092 - 42755030
Alignment:
Q  459 tcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagattt 520  Q
    ||||||| |||||||| ||||||  |||||||||||||||||| |||||||||| ||||||||    
T  42755092 tcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 42755030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 483 - 520
Target Start/End: Complemental strand, 25581264 - 25581227
Alignment:
Q  483 ttcaagaatgacatggcacaataatcacctttagattt 520  Q
    |||||||||||||||||| |||||||||||||||||||    
T  25581264 ttcaagaatgacatggcaaaataatcacctttagattt 25581227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 484 - 541
Target Start/End: Original strand, 27835288 - 27835345
Alignment:
Q  484 tcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaaccttt 541  Q
    |||| ||||| ||| ||||||||||| | |||||||||| ||||||||||||||||||    
T  27835288 tcaaaaatgatatgacacaataatcatccttagatttcaatctcatttattaaccttt 27835345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 475 - 520
Target Start/End: Complemental strand, 31347815 - 31347770
Alignment:
Q  475 aagaaagattcaagaatgacatggcacaataatcacctttagattt 520  Q
    |||||| ||||||||||||||||||| |||||||||| ||||||||    
T  31347815 aagaaaaattcaagaatgacatggcagaataatcacccttagattt 31347770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 459 - 506
Target Start/End: Complemental strand, 1886669 - 1886621
Alignment:
Q  459 tcaagaatgattttat-aagaaagattcaagaatgacatggcacaataa 506  Q
    |||||||||||||||| |||||||||||||||||||| ||||| |||||    
T  1886669 tcaagaatgattttatcaagaaagattcaagaatgacgtggcagaataa 1886621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 459 - 534
Target Start/End: Original strand, 7017668 - 7017743
Alignment:
Q  459 tcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttatt 534  Q
    |||||||||||||   |||||| ||| |||||||||||   | |||||||| | ||||||||||||||||||||||    
T  7017668 tcaagaatgatttatcaagaaatatttaagaatgacattttataataatcatccttagatttcagtctcatttatt 7017743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 475 - 513
Target Start/End: Complemental strand, 3890649 - 3890611
Alignment:
Q  475 aagaaagattcaagaatgacatggcacaataatcacctt 513  Q
    |||||| ||||||||||||||||||| ||||||||||||    
T  3890649 aagaaaaattcaagaatgacatggcagaataatcacctt 3890611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 474 - 520
Target Start/End: Complemental strand, 7017899 - 7017853
Alignment:
Q  474 taagaaagattcaagaatgacatggcacaataatcacctttagattt 520  Q
    ||||||| ||||||||||||||||||| |||||||| | ||||||||    
T  7017899 taagaaaaattcaagaatgacatggcagaataatcatccttagattt 7017853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 459 - 520
Target Start/End: Original strand, 7021993 - 7022055
Alignment:
Q  459 tcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagattt 520  Q
    ||||||| |||||| | |||||| |||||||||||| |||||| |||||||||| ||||||||    
T  7021993 tcaagaaagattttctcaagaaaaattcaagaatgatatggcagaataatcacccttagattt 7022055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 459 - 520
Target Start/End: Complemental strand, 17841900 - 17841838
Alignment:
Q  459 tcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagattt 520  Q
    ||||||| |||||| | ||||||  |||||||||||||||||| |||||||||| ||||||||    
T  17841900 tcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 17841838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 459 - 520
Target Start/End: Complemental strand, 20091851 - 20091789
Alignment:
Q  459 tcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagattt 520  Q
    |||||||  ||||||| ||||||  |||||||||||||||||| |||||||||| ||||||||    
T  20091851 tcaagaaatattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 20091789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 459 - 520
Target Start/End: Complemental strand, 40780179 - 40780117
Alignment:
Q  459 tcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagattt 520  Q
    ||||||| |||||| | ||||||  |||||||||||||||||| |||||||||| ||||||||    
T  40780179 tcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 40780117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 475 - 520
Target Start/End: Complemental strand, 3597074 - 3597029
Alignment:
Q  475 aagaaagattcaagaatgacatggcacaataatcacctttagattt 520  Q
    ||||||| |||||||||||||||||| |||||| ||| ||||||||    
T  3597074 aagaaagtttcaagaatgacatggcagaataattacccttagattt 3597029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 475 - 520
Target Start/End: Complemental strand, 15972910 - 15972865
Alignment:
Q  475 aagaaagattcaagaatgacatggcacaataatcacctttagattt 520  Q
    |||||||||| |||||||||||| || |||||||||| ||||||||    
T  15972910 aagaaagattgaagaatgacatgacagaataatcacccttagattt 15972865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 459 - 520
Target Start/End: Complemental strand, 30835096 - 30835035
Alignment:
Q  459 tcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagattt 520  Q
    ||||||| ||||||||   ||| ||||||||||||||||||| |||||||||| || |||||    
T  30835096 tcaagaaagattttatcgaaaaaattcaagaatgacatggcagaataatcaccctttgattt 30835035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 459 - 511
Target Start/End: Original strand, 38016986 - 38017039
Alignment:
Q  459 tcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacc 511  Q
    ||||||| |||||||| ||||||  |||||||||||||||||| ||||||||||    
T  38016986 tcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacc 38017039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 367 - 396
Target Start/End: Original strand, 38436733 - 38436762
Alignment:
Q  367 ttgtgtctatccaataattattctttcatc 396  Q
    ||||||||||||||||||||||||||||||    
T  38436733 ttgtgtctatccaataattattctttcatc 38436762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 483 - 520
Target Start/End: Complemental strand, 39772826 - 39772789
Alignment:
Q  483 ttcaagaatgacatggcacaataatcacctttagattt 520  Q
    |||||||||||||||||| |||||||||| ||||||||    
T  39772826 ttcaagaatgacatggcagaataatcacccttagattt 39772789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 461 - 520
Target Start/End: Complemental strand, 26042164 - 26042104
Alignment:
Q  461 aagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagattt 520  Q
    ||||| |||||||| ||||||  ||||||||||||||| || |||||||||| ||||||||    
T  26042164 aagaaagattttatcaagaaaatttcaagaatgacatgacagaataatcacccttagattt 26042104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 82; Significance: 2e-38; HSPs: 30)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 459 - 544
Target Start/End: Complemental strand, 8145628 - 8145543
Alignment:
Q  459 tcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaacctttcat 544  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  8145628 tcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcat 8145543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 459 - 544
Target Start/End: Complemental strand, 4892457 - 4892372
Alignment:
Q  459 tcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaacctttcat 544  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  4892457 tcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcat 4892372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 459 - 544
Target Start/End: Original strand, 33584139 - 33584224
Alignment:
Q  459 tcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaacctttcat 544  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  33584139 tcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcat 33584224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 461 - 544
Target Start/End: Complemental strand, 14138920 - 14138837
Alignment:
Q  461 aagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaacctttcat 544  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||    
T  14138920 aagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcaatctcatttattaatctttcat 14138837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 459 - 544
Target Start/End: Original strand, 3521817 - 3521902
Alignment:
Q  459 tcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaacctttcat 544  Q
    |||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  3521817 tcaagaatgattttataagaaaaatttaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcat 3521902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 459 - 544
Target Start/End: Original strand, 6043322 - 6043407
Alignment:
Q  459 tcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaacctttcat 544  Q
    |||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  6043322 tcaagaatgattttataagaaaaatttaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcat 6043407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 459 - 544
Target Start/End: Complemental strand, 12851057 - 12850972
Alignment:
Q  459 tcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaacctttcat 544  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||    
T  12851057 tcaagaatgattttataagaaaaattcaagaatgacatggcacaataaccacctttagatttcagtctcatttattaatctttcat 12850972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 459 - 544
Target Start/End: Complemental strand, 25398493 - 25398408
Alignment:
Q  459 tcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaacctttcat 544  Q
    |||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  25398493 tcaagaatgattttataagaaaaattcaacaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcat 25398408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 459 - 544
Target Start/End: Original strand, 37321603 - 37321688
Alignment:
Q  459 tcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaacctttcat 544  Q
    |||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||    
T  37321603 tcaagaatgattttataagaaatattcaagaatgaaatggcacaataatcacctttagatttcagtctcatttattaatctttcat 37321688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 459 - 544
Target Start/End: Original strand, 12614547 - 12614633
Alignment:
Q  459 tcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaacctttcat 544  Q
    ||||| |||||||||| || ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12614547 tcaagtatgattttatcaaaaaagatttaagaatgacatggcacaataatcacctttagatttcagtctcatttattaacctttcat 12614633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 459 - 544
Target Start/End: Complemental strand, 2477891 - 2477806
Alignment:
Q  459 tcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaacctttcat 544  Q
    |||||||||||||||||||||||||  ||||||||||||||||||| ||||||||||||||||||||| ||||||||| |||||||    
T  2477891 tcaagaatgattttataagaaagatctaagaatgacatggcacaatgatcacctttagatttcagtcttatttattaatctttcat 2477806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 459 - 544
Target Start/End: Complemental strand, 3363034 - 3362949
Alignment:
Q  459 tcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaacctttcat 544  Q
    |||||||||||||||||||||| ||| |||||||||||| |||||||| ||||||||||||||||||||||||||||| |||||||    
T  3363034 tcaagaatgattttataagaaaaatttaagaatgacatgacacaataaccacctttagatttcagtctcatttattaatctttcat 3362949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 465 - 544
Target Start/End: Original strand, 11360947 - 11361026
Alignment:
Q  465 atgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaacctttcat 544  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| ||||||||| |||||||    
T  11360947 atgattttataagaaagattcaagaatgacatggcacaataatcatctttagatttcaatctaatttattaatctttcat 11361026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 459 - 544
Target Start/End: Original strand, 38899535 - 38899621
Alignment:
Q  459 tcaagaatgattttataagaaaga-ttcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaacctttcat 544  Q
    |||||||||||||||||| ||| | |||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||    
T  38899535 tcaagaatgattttataaaaaaaaattcaagaatgacatggcacaataaccacctttagatttcagtctcatttattaatctttcat 38899621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 459 - 534
Target Start/End: Original strand, 22912867 - 22912942
Alignment:
Q  459 tcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttatt 534  Q
    |||||||||||||   ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  22912867 tcaagaatgatttatcaagaaagattcaagaatgacatggcacaataatcacccttagatttcagtctcatttatt 22912942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 486 - 544
Target Start/End: Original strand, 4433845 - 4433903
Alignment:
Q  486 aagaatgacatggcacaataatcacctttagatttcagtctcatttattaacctttcat 544  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||    
T  4433845 aagaatgacatggcacaataatcacctttagatttcagtcttatttattaatctttcat 4433903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 459 - 534
Target Start/End: Original strand, 17545492 - 17545567
Alignment:
Q  459 tcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttatt 534  Q
    |||||||||||||   || ||| ||| |||||||||||| ||||||||||| | ||||||||||||||||||||||    
T  17545492 tcaagaatgatttatcaaaaaatatttaagaatgacatgacacaataatcatccttagatttcagtctcatttatt 17545567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 461 - 541
Target Start/End: Complemental strand, 27482077 - 27481995
Alignment:
Q  461 aagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttaga-tttcagtctcatttattaaccttt 541  Q
    |||||||||||||| || |||||||||||||||||||  || |||||||||||||||| ||| | ||| ||||||||||||||    
T  27482077 aagaatgattttatcaaaaaagattcaagaatgacataacagaataatcacctttagatttttaatcttatttattaaccttt 27481995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 475 - 544
Target Start/End: Original strand, 31640767 - 31640836
Alignment:
Q  475 aagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaacctttcat 544  Q
    |||||||||||||||||||||||||| |||||||  |||||||||    ||| |||||||||||||||||    
T  31640767 aagaaagattcaagaatgacatggcagaataatcgactttagattgatatcttatttattaacctttcat 31640836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 481 - 536
Target Start/End: Complemental strand, 13664792 - 13664737
Alignment:
Q  481 gattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaa 536  Q
    |||||||||||||||||  | |||||||||| |||||||||||||| |||||||||    
T  13664792 gattcaagaatgacatgatagaataatcacccttagatttcagtcttatttattaa 13664737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 459 - 520
Target Start/End: Original strand, 8145390 - 8145452
Alignment:
Q  459 tcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagattt 520  Q
    ||||||| |||||||| ||||||  |||||||||||||||||| |||||||||| ||||||||    
T  8145390 tcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 8145452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 459 - 520
Target Start/End: Complemental strand, 12614783 - 12614721
Alignment:
Q  459 tcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagattt 520  Q
    |||||||  ||||||| ||||||||||||||||||||||| || |||||||||| ||||||||    
T  12614783 tcaagaaatattttatcaagaaagattcaagaatgacatgacataataatcacccttagattt 12614721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 459 - 520
Target Start/End: Complemental strand, 22913104 - 22913042
Alignment:
Q  459 tcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagattt 520  Q
    ||||||| |||||| | |||||| ||||||||||||||||||| |||||||||| ||||||||    
T  22913104 tcaagaaagattttttcaagaaaaattcaagaatgacatggcagaataatcacccttagattt 22913042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 459 - 515
Target Start/End: Original strand, 10458412 - 10458469
Alignment:
Q  459 tcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcaccttta 515  Q
    |||||||  ||||||| |||||| ||||||||||||||||||| ||||||||||||||    
T  10458412 tcaagaaaaattttatcaagaaaaattcaagaatgacatggcaaaataatcaccttta 10458469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 475 - 520
Target Start/End: Complemental strand, 17545718 - 17545673
Alignment:
Q  475 aagaaagattcaagaatgacatggcacaataatcacctttagattt 520  Q
    |||||| ||||||||||||||||||| |||||||||| ||||||||    
T  17545718 aagaaaaattcaagaatgacatggcagaataatcaccattagattt 17545673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 475 - 520
Target Start/End: Complemental strand, 31640973 - 31640928
Alignment:
Q  475 aagaaagattcaagaatgacatggcacaataatcacctttagattt 520  Q
    |||||||||||||||||||||||||| ||||| |||| ||||||||    
T  31640973 aagaaagattcaagaatgacatggcagaataaccacccttagattt 31640928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 459 - 520
Target Start/End: Original strand, 2477651 - 2477713
Alignment:
Q  459 tcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagattt 520  Q
    ||||||| |||||||| ||||||  || ||||||||||||||| |||||||||| ||||||||    
T  2477651 tcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatcacccttagattt 2477713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 459 - 520
Target Start/End: Complemental strand, 6043561 - 6043499
Alignment:
Q  459 tcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagattt 520  Q
    ||||||| |||||||| ||||||  |||||||||||||||| | |||||||||| ||||||||    
T  6043561 tcaagaaagattttatcaagaaaatttcaagaatgacatggaagaataatcacccttagattt 6043499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 459 - 520
Target Start/End: Complemental strand, 11361181 - 11361119
Alignment:
Q  459 tcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagattt 520  Q
    ||||||| |||||||| ||||||  || ||||||||||||||| |||||||||| ||||||||    
T  11361181 tcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatcacccttagattt 11361119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 484 - 544
Target Start/End: Original strand, 36880148 - 36880213
Alignment:
Q  484 tcaagaatgacatggcacaata----atcacctttagattt-cagtctcatttattaacctttcat 544  Q
    |||||||||||||| |||||||    |||||| |||||||| ||||||||| ||||||||||||||    
T  36880148 tcaagaatgacatgacacaatatataatcacccttagattttcagtctcatctattaacctttcat 36880213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 82; Significance: 2e-38; HSPs: 39)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 459 - 544
Target Start/End: Complemental strand, 30385655 - 30385570
Alignment:
Q  459 tcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaacctttcat 544  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  30385655 tcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcat 30385570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 459 - 544
Target Start/End: Original strand, 3137224 - 3137309
Alignment:
Q  459 tcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaacctttcat 544  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  3137224 tcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcat 3137309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 459 - 544
Target Start/End: Original strand, 8320392 - 8320477
Alignment:
Q  459 tcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaacctttcat 544  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  8320392 tcaataatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcat 8320477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 459 - 544
Target Start/End: Original strand, 22426155 - 22426240
Alignment:
Q  459 tcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaacctttcat 544  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||    
T  22426155 tcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacatttagatttcagtctcatttattaatctttcat 22426240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 459 - 544
Target Start/End: Complemental strand, 33114049 - 33113964
Alignment:
Q  459 tcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaacctttcat 544  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||    
T  33114049 tcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcaatctcatttattaatctttcat 33113964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 459 - 544
Target Start/End: Original strand, 34482698 - 34482783
Alignment:
Q  459 tcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaacctttcat 544  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  34482698 tcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcat 34482783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 459 - 544
Target Start/End: Original strand, 37216863 - 37216948
Alignment:
Q  459 tcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaacctttcat 544  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||    
T  37216863 tcaagaatgattttataagaaagattcaagaatgacatggtacaataatcacctttagatttcagtctcatttattaatctttcat 37216948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 459 - 544
Target Start/End: Complemental strand, 3089674 - 3089589
Alignment:
Q  459 tcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaacctttcat 544  Q
    |||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  3089674 tcaagaatgattttataagaaagatctaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcat 3089589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 459 - 536
Target Start/End: Complemental strand, 6042132 - 6042055
Alignment:
Q  459 tcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaa 536  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6042132 tcaagaatgattttataagaaagatccaagaatgacatggcacaataatcacctttagatttcagtctcatttattaa 6042055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 459 - 544
Target Start/End: Original strand, 19650710 - 19650795
Alignment:
Q  459 tcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaacctttcat 544  Q
    ||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||    
T  19650710 tcaagaatgattttataagaaagatccaagaatgacatgacacaataatcacctttagatttcagtctcatttattaatctttcat 19650795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 459 - 544
Target Start/End: Complemental strand, 33145967 - 33145882
Alignment:
Q  459 tcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaacctttcat 544  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||| |||||||||||||||||    
T  33145967 tcaagaatgattttataagaaagattcaagaatgacatgacacaataatcacccttagatttcagtcttatttattaacctttcat 33145882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 459 - 544
Target Start/End: Complemental strand, 47738367 - 47738281
Alignment:
Q  459 tcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaacctttcat 544  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||    
T  47738367 tcaagaatgattttatcaagaaagattcaagaatgacatggcacaataatcatccttagatttcagtctcatttattaacctttcat 47738281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 459 - 544
Target Start/End: Complemental strand, 2754974 - 2754889
Alignment:
Q  459 tcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaacctttcat 544  Q
    |||||||| ||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||    
T  2754974 tcaagaatcattttataagaaagatttaagaatgacatggcacaataatcacctttaaatttcagtctcatttattaatctttcat 2754889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 459 - 544
Target Start/End: Complemental strand, 3456319 - 3456234
Alignment:
Q  459 tcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaacctttcat 544  Q
    ||||||||||||||||||||||||||||||||||||||| |||| |||||| |||||||||||||||||||||||||| |||||||    
T  3456319 tcaagaatgattttataagaaagattcaagaatgacatgacacactaatcatctttagatttcagtctcatttattaatctttcat 3456234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 459 - 544
Target Start/End: Original strand, 3574336 - 3574421
Alignment:
Q  459 tcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaacctttcat 544  Q
    ||||||||||||||||||||||||| ||||||||||||| |||||||||||||| ||||||||||||||||||||||| |||||||    
T  3574336 tcaagaatgattttataagaaagatccaagaatgacatgacacaataatcacctctagatttcagtctcatttattaatctttcat 3574421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 459 - 544
Target Start/End: Complemental strand, 37522308 - 37522223
Alignment:
Q  459 tcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaacctttcat 544  Q
    |||||||||||||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||    
T  37522308 tcaagaatgattttataagaaaaatttaagaatgacatggcataataatcacctttagatttcagtctcatttattaatctttcat 37522223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 459 - 544
Target Start/End: Complemental strand, 26613002 - 26612916
Alignment:
Q  459 tcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaacctttcat 544  Q
    |||| ||||||||||| ||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  26613002 tcaataatgattttattaagaaagattcaagaataacatggcacaataatcacccttagatttcagtctcatttattaacctttcat 26612916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 459 - 544
Target Start/End: Complemental strand, 33839791 - 33839705
Alignment:
Q  459 tcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaacctttcat 544  Q
    |||||||||||||||| ||||||||||||||||||||||| ||||||||||||| ||| ||||||||||||||||||||||||||||    
T  33839791 tcaagaatgattttatcaagaaagattcaagaatgacatgacacaataatcacccttaaatttcagtctcatttattaacctttcat 33839705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 459 - 544
Target Start/End: Original strand, 36864842 - 36864928
Alignment:
Q  459 tcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaacctttcat 544  Q
    |||||||||||||||| || |||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||| ||||||    
T  36864842 tcaagaatgattttatcaaaaaagattcaagaatgacatgacacaataatcacccttagatttcagtctcatttattaacatttcat 36864928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 459 - 536
Target Start/End: Complemental strand, 48161161 - 48161084
Alignment:
Q  459 tcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaa 536  Q
    |||||||||||||||||||||| || |||||| |||||| ||||||||||||||||||||||||||||||||||||||    
T  48161161 tcaagaatgattttataagaaatatccaagaacgacatgacacaataatcacctttagatttcagtctcatttattaa 48161084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 459 - 541
Target Start/End: Complemental strand, 40328087 - 40328004
Alignment:
Q  459 tcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaaccttt 541  Q
    |||||||||||||||| ||||||||||||||||||||||| ||||||||||||| |||||||||||||| ||||||| ||||||    
T  40328087 tcaagaatgattttatcaagaaagattcaagaatgacatgacacaataatcacccttagatttcagtcttatttatttaccttt 40328004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 461 - 544
Target Start/End: Complemental strand, 42921379 - 42921295
Alignment:
Q  461 aagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaacctttcat 544  Q
    |||||||||||||| |||||| ||| |||||||||||||||||| ||||||| ||| ||||||||||||||||||||||||||||    
T  42921379 aagaatgattttatcaagaaatatttaagaatgacatggcacaacaatcacccttaaatttcagtctcatttattaacctttcat 42921295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 459 - 534
Target Start/End: Original strand, 8361849 - 8361924
Alignment:
Q  459 tcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttatt 534  Q
    |||||||||||||   |||||| |||||||||||||||| ||||||||||||| ||||||||||||||||||||||    
T  8361849 tcaagaatgatttatcaagaaatattcaagaatgacatgacacaataatcacccttagatttcagtctcatttatt 8361924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 459 - 534
Target Start/End: Original strand, 9796839 - 9796914
Alignment:
Q  459 tcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttatt 534  Q
    |||||||||||||   ||||||||||||||||||||||| ||||||||||||  ||||||||||||||||||||||    
T  9796839 tcaagaatgatttatcaagaaagattcaagaatgacatgtcacaataatcactcttagatttcagtctcatttatt 9796914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 459 - 543
Target Start/End: Complemental strand, 24343805 - 24343720
Alignment:
Q  459 tcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaacctttca 543  Q
    |||||||||||||||| || ||||||||||||||||||||  |  ||||||||| |||||||||||||| ||||||||||||||||    
T  24343805 tcaagaatgattttatcaaaaaagattcaagaatgacatgatatgataatcacccttagatttcagtcttatttattaacctttca 24343720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 484 - 544
Target Start/End: Complemental strand, 42298092 - 42298032
Alignment:
Q  484 tcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaacctttcat 544  Q
    |||||||||||||| |||||||| |||| ||||||||||||||||||||||||||||||||    
T  42298092 tcaagaatgacatgacacaataaccacccttagatttcagtctcatttattaacctttcat 42298032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 459 - 534
Target Start/End: Complemental strand, 41224489 - 41224414
Alignment:
Q  459 tcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttatt 534  Q
    |||||||||||||   |||||| |||||||||||||||||||||||||||||| ||| |||||| |||||||||||    
T  41224489 tcaagaatgatttatcaagaaatattcaagaatgacatggcacaataatcacccttaaatttcaatctcatttatt 41224414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 459 - 541
Target Start/End: Original strand, 41883031 - 41883114
Alignment:
Q  459 tcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaaccttt 541  Q
    |||| ||||||||||| |||||||||||||||||||||||| | |||||||| |||| ||||||||||| |||||| |||||||    
T  41883031 tcaaaaatgattttatgaagaaagattcaagaatgacatggtaaaataatcatctttggatttcagtcttatttatcaaccttt 41883114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 459 - 536
Target Start/End: Complemental strand, 46919150 - 46919072
Alignment:
Q  459 tcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaa 536  Q
    |||||||||||||||| || |||||||||| |||||||||||| ||||||||||| |||||||| |||| |||||||||    
T  46919150 tcaagaatgattttatcaaaaaagattcaataatgacatggcagaataatcacctctagatttcggtcttatttattaa 46919072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 459 - 520
Target Start/End: Original strand, 2754732 - 2754794
Alignment:
Q  459 tcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagattt 520  Q
    ||||||| |||||||| ||||||  || ||||||||||||||| |||||||||||||||||||    
T  2754732 tcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatcacctttagattt 2754794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 459 - 520
Target Start/End: Complemental strand, 9797079 - 9797017
Alignment:
Q  459 tcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagattt 520  Q
    ||||||| |||||| | |||||| ||||||||||||||||||| |||||||||| ||||||||    
T  9797079 tcaagaaagattttctcaagaaaaattcaagaatgacatggcagaataatcaccattagattt 9797017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 459 - 520
Target Start/End: Original strand, 47738120 - 47738182
Alignment:
Q  459 tcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagattt 520  Q
    ||||||| |||||||| |||||| |||||||||||| |||||| |||||| ||||||||||||    
T  47738120 tcaagaaagattttatcaagaaatattcaagaatgatatggcagaataattacctttagattt 47738182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 475 - 520
Target Start/End: Complemental strand, 8362078 - 8362033
Alignment:
Q  475 aagaaagattcaagaatgacatggcacaataatcacctttagattt 520  Q
    |||||| ||||||||||||||||||| |||||||||| ||||||||    
T  8362078 aagaaaaattcaagaatgacatggcagaataatcacccttagattt 8362033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 459 - 520
Target Start/End: Complemental strand, 3137464 - 3137402
Alignment:
Q  459 tcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagattt 520  Q
    ||||||| |||||| | ||||||  |||||||||||||||||| |||||||||| ||||||||    
T  3137464 tcaagaaagattttttcaagaaaatttcaagaatgacatggcaaaataatcacccttagattt 3137402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 459 - 520
Target Start/End: Complemental strand, 3574577 - 3574515
Alignment:
Q  459 tcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagattt 520  Q
    ||||||| |||||||| ||||||  || ||||||||||||||| |||||||||| ||||||||    
T  3574577 tcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatcacccttagattt 3574515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 459 - 520
Target Start/End: Original strand, 6041899 - 6041961
Alignment:
Q  459 tcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagattt 520  Q
    ||||||| |||||||| ||||||  ||||||||||||||| || |||||||||| ||||||||    
T  6041899 tcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatcacccttagattt 6041961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 459 - 520
Target Start/End: Original strand, 33145728 - 33145789
Alignment:
Q  459 tcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagattt 520  Q
    ||||||| |||||||| | |||  || ||||||||||||||| |||||||||| ||||||||    
T  33145728 tcaagaaagattttattaaaaaattttaagaatgacatggcagaataatcacccttagattt 33145789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 475 - 520
Target Start/End: Complemental strand, 41883256 - 41883211
Alignment:
Q  475 aagaaagattcaagaatgacatggcacaataatcacctttagattt 520  Q
    |||||| ||||||||||||||||||| |||||||||| ||| ||||    
T  41883256 aagaaaaattcaagaatgacatggcagaataatcacccttaaattt 41883211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 461 - 520
Target Start/End: Complemental strand, 19650948 - 19650888
Alignment:
Q  461 aagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagattt 520  Q
    ||||| |||||||| ||||||  || ||||||||||||||| |||||||||| ||||||||    
T  19650948 aagaaagattttatcaagaaaattttaagaatgacatggcagaataatcaccattagattt 19650888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 80; Significance: 3e-37; HSPs: 28)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 461 - 544
Target Start/End: Complemental strand, 45637964 - 45637881
Alignment:
Q  461 aagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaacctttcat 544  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  45637964 aagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcat 45637881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 459 - 544
Target Start/End: Original strand, 4974545 - 4974630
Alignment:
Q  459 tcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaacctttcat 544  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  4974545 tcaagaatgattttataaaaaagattcaagaatgacatggcacaataatcacccttagatttcagtctcatttattaacctttcat 4974630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 459 - 544
Target Start/End: Complemental strand, 24395226 - 24395141
Alignment:
Q  459 tcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaacctttcat 544  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  24395226 tcaagaatgattttataaaaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcat 24395141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 459 - 544
Target Start/End: Complemental strand, 34483093 - 34483008
Alignment:
Q  459 tcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaacctttcat 544  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||    
T  34483093 tcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcaatctcatttattaatctttcat 34483008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 459 - 544
Target Start/End: Complemental strand, 3962233 - 3962148
Alignment:
Q  459 tcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaacctttcat 544  Q
    |||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  3962233 tcaagaatgattttataagaaatatccaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcat 3962148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 461 - 544
Target Start/End: Complemental strand, 15329527 - 15329444
Alignment:
Q  461 aagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaacctttcat 544  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||    
T  15329527 aagaatgattttataagaaatattcaagaatgacatggcacaataatcacttttagatttcagtctcatttattaatctttcat 15329444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 459 - 541
Target Start/End: Original strand, 15577657 - 15577739
Alignment:
Q  459 tcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaaccttt 541  Q
    ||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||    
T  15577657 tcaagaatgattttataagaaagatccaagaatgacatgtcacaataatcacctttagatttcagtctcatttattaatcttt 15577739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 459 - 544
Target Start/End: Complemental strand, 30848824 - 30848739
Alignment:
Q  459 tcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaacctttcat 544  Q
    ||||||||| |||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||    
T  30848824 tcaagaatgcttttataagaaaaattcaagaatgacatggcacaataatcacctttaaatttcagtctcatttattaatctttcat 30848739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 459 - 544
Target Start/End: Complemental strand, 35445652 - 35445567
Alignment:
Q  459 tcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaacctttcat 544  Q
    |||||||||||||||||||||| |||||||||||| ||| |||||||||||||||||||||||||||||||||||||| |||||||    
T  35445652 tcaagaatgattttataagaaaaattcaagaatgatatgacacaataatcacctttagatttcagtctcatttattaatctttcat 35445567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 459 - 544
Target Start/End: Complemental strand, 42612066 - 42611981
Alignment:
Q  459 tcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaacctttcat 544  Q
    |||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||    
T  42612066 tcaagaatgattttataagaaagatctaagaatgacatggcacaataatcacctttagatttcagtcttatttattaatctttcat 42611981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 459 - 544
Target Start/End: Original strand, 48880737 - 48880822
Alignment:
Q  459 tcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaacctttcat 544  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| |||||||    
T  48880737 tcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacatttagatttcagtttcatttattaatctttcat 48880822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 459 - 528
Target Start/End: Original strand, 25167666 - 25167735
Alignment:
Q  459 tcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctca 528  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  25167666 tcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctca 25167735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 459 - 544
Target Start/End: Complemental strand, 35876499 - 35876414
Alignment:
Q  459 tcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaacctttcat 544  Q
    |||||||||||||||||||||| ||  || |||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  35876499 tcaagaatgattttataagaaatatctaaaaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcat 35876414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 459 - 544
Target Start/End: Complemental strand, 29737400 - 29737314
Alignment:
Q  459 tcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaacctttcat 544  Q
    |||||||||||||||| |||||||||| |||||| ||||| ||||||||||||| ||||||||||||||||||||||||||||||||    
T  29737400 tcaagaatgattttatcaagaaagatttaagaataacatgtcacaataatcacccttagatttcagtctcatttattaacctttcat 29737314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 459 - 544
Target Start/End: Complemental strand, 42696339 - 42696253
Alignment:
Q  459 tcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaacctttcat 544  Q
    |||| ||||||||||| || ||| ||||||||||||||||| |||||||||||| ||||||||||||||||||||||||| ||||||    
T  42696339 tcaataatgattttatcaaaaaaaattcaagaatgacatggtacaataatcacccttagatttcagtctcatttattaacttttcat 42696253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 459 - 534
Target Start/End: Original strand, 37476890 - 37476965
Alignment:
Q  459 tcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttatt 534  Q
    |||||||||||||   |||||||||| || ||||||||||||||||||||||| ||||||||||||||||||||||    
T  37476890 tcaagaatgatttatcaagaaagatttaataatgacatggcacaataatcacccttagatttcagtctcatttatt 37476965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 463 - 541
Target Start/End: Original strand, 20009912 - 20009991
Alignment:
Q  463 gaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaaccttt 541  Q
    |||||||||||| || |||||||||||||||||||| |||||||||||   |||||||| ||||||||||||||||||||    
T  20009912 gaatgattttatcaaaaaagattcaagaatgacatgacacaataatcatacttagattttagtctcatttattaaccttt 20009991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 475 - 534
Target Start/End: Complemental strand, 18037216 - 18037157
Alignment:
Q  475 aagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttatt 534  Q
    |||||||||| ||||||||||||| |||||||||||| ||||||||||||| ||||||||    
T  18037216 aagaaagatttaagaatgacatggtacaataatcacccttagatttcagtcacatttatt 18037157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 459 - 534
Target Start/End: Complemental strand, 15238639 - 15238564
Alignment:
Q  459 tcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttatt 534  Q
    |||||||||||||   || ||| ||| |||||||||||| ||||||||||| | ||||||||||||||||||||||    
T  15238639 tcaagaatgatttatcaaaaaatatttaagaatgacatgacacaataatcatccttagatttcagtctcatttatt 15238564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 459 - 520
Target Start/End: Complemental strand, 4974785 - 4974723
Alignment:
Q  459 tcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagattt 520  Q
    ||||||| |||||||| ||||||  |||||||||||||||||| |||||||||| ||||||||    
T  4974785 tcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 4974723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 459 - 520
Target Start/End: Original strand, 42611826 - 42611888
Alignment:
Q  459 tcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagattt 520  Q
    ||||||| |||||||| ||||||  |||||||||||||||||| |||||||||| ||||||||    
T  42611826 tcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 42611888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 459 - 520
Target Start/End: Original strand, 45637727 - 45637789
Alignment:
Q  459 tcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagattt 520  Q
    ||||||| |||||||| ||||||  |||||||||||||||||| |||||||||| ||||||||    
T  45637727 tcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 45637789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 475 - 520
Target Start/End: Original strand, 15238414 - 15238459
Alignment:
Q  475 aagaaagattcaagaatgacatggcacaataatcacctttagattt 520  Q
    |||||| ||||||||||||||||||| |||||||||| ||||||||    
T  15238414 aagaaaaattcaagaatgacatggcagaataatcaccattagattt 15238459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 459 - 517
Target Start/End: Complemental strand, 15577900 - 15577841
Alignment:
Q  459 tcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttaga 517  Q
    ||||||| |||||||| ||||||  |||||||||||||||||| |||||||||| |||||    
T  15577900 tcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttaga 15577841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 459 - 520
Target Start/End: Original strand, 15329288 - 15329350
Alignment:
Q  459 tcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagattt 520  Q
    ||||||| |||||||| ||||||  ||||||||||||||| || |||||||||| ||||||||    
T  15329288 tcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatcacccttagattt 15329350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 459 - 520
Target Start/End: Original strand, 34482850 - 34482912
Alignment:
Q  459 tcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagattt 520  Q
    ||||||| |||||||| ||||||  || ||||||||||||||| |||||||||| ||||||||    
T  34482850 tcaagaaagattttattaagaaaattttaagaatgacatggcagaataatcacccttagattt 34482912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 459 - 520
Target Start/End: Complemental strand, 48880977 - 48880915
Alignment:
Q  459 tcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagattt 520  Q
    ||||||| |||||||| ||||||  ||||||||||||||| || |||||||||| ||||||||    
T  48880977 tcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatcacccttagattt 48880915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 483 - 520
Target Start/End: Original strand, 35444598 - 35444635
Alignment:
Q  483 ttcaagaatgacatggcacaataatcacctttagattt 520  Q
    |||||||||||||||||| |||||||||| ||||||||    
T  35444598 ttcaagaatgacatggcagaataatcacccttagattt 35444635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228 (Bit Score: 78; Significance: 5e-36; HSPs: 6)
Name: scaffold0228
Description:

Target: scaffold0228; HSP #1
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 459 - 544
Target Start/End: Complemental strand, 26191 - 26106
Alignment:
Q  459 tcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaacctttcat 544  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  26191 tcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcat 26106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #2
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 459 - 544
Target Start/End: Complemental strand, 16239 - 16154
Alignment:
Q  459 tcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaacctttcat 544  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||    
T  16239 tcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcatctttagatttcagtctcatttattaatctttcat 16154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 459 - 520
Target Start/End: Original strand, 8417 - 8479
Alignment:
Q  459 tcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagattt 520  Q
    ||||||| |||||||| ||||||  |||||||||||||||||| |||||||||| ||||||||    
T  8417 tcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 8479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 459 - 520
Target Start/End: Original strand, 15999 - 16061
Alignment:
Q  459 tcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagattt 520  Q
    ||||||| |||||||| ||||||  |||||||||||||||||| |||||||||| ||||||||    
T  15999 tcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 16061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 459 - 520
Target Start/End: Original strand, 25951 - 26013
Alignment:
Q  459 tcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagattt 520  Q
    ||||||| |||||||| ||||||  |||||||||||||||||| |||||||||| ||||||||    
T  25951 tcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 26013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 511 - 544
Target Start/End: Complemental strand, 8605 - 8572
Alignment:
Q  511 ctttagatttcagtctcatttattaacctttcat 544  Q
    |||||||||||||||||||||||||| |||||||    
T  8605 ctttagatttcagtctcatttattaatctttcat 8572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 78; Significance: 5e-36; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 459 - 544
Target Start/End: Original strand, 17175831 - 17175916
Alignment:
Q  459 tcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaacctttcat 544  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||    
T  17175831 tcaagaatgattttataagaaagattcaagaatgacatggtacaataatcacctttagatttcagtctcatttattaatctttcat 17175916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 459 - 544
Target Start/End: Complemental strand, 28675403 - 28675318
Alignment:
Q  459 tcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaacctttcat 544  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||    
T  28675403 tcaagaatgattttataagaaagattcaagaatgacatgacacaataatcacccttagatttcagtctcatttattaacctttcat 28675318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 459 - 544
Target Start/End: Complemental strand, 33696952 - 33696867
Alignment:
Q  459 tcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaacctttcat 544  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  33696952 tcaagaatgattttataagaaagatttaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcat 33696867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 465 - 544
Target Start/End: Original strand, 2309239 - 2309318
Alignment:
Q  465 atgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaacctttcat 544  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  2309239 atgattttataagaaagattcaagaatgacatggcacaataatcacccttagatttcagtctcatttattaacctttcat 2309318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 459 - 544
Target Start/End: Original strand, 17705279 - 17705363
Alignment:
Q  459 tcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaacctttcat 544  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||    
T  17705279 tcaagaatgattttataagaaagattcaagaatgacatgacacaataatcacc-ttagatttcagtctcatttattaacctttcat 17705363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 459 - 544
Target Start/End: Original strand, 18365384 - 18365469
Alignment:
Q  459 tcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaacctttcat 544  Q
    ||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||    
T  18365384 tcaagaatgattttataagaaagatccaagaatgacatagcacaataatcacctttagatttcagtctcatttattaatctttcat 18365469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 459 - 544
Target Start/End: Original strand, 18370648 - 18370733
Alignment:
Q  459 tcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaacctttcat 544  Q
    ||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||    
T  18370648 tcaagaatgattttataagaaagatccaagaatgacatagcacaataatcacctttagatttcagtctcatttattaatctttcat 18370733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 459 - 541
Target Start/End: Original strand, 6031550 - 6031632
Alignment:
Q  459 tcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaaccttt 541  Q
    |||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  6031550 tcaagaatgattttataaaaaagatttaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatcttt 6031632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 459 - 544
Target Start/End: Original strand, 23290891 - 23290976
Alignment:
Q  459 tcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaacctttcat 544  Q
    |||| |||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||| |||||||    
T  23290891 tcaaaaatgattttataagaaagattcaagaatgatatggcacaataattacctttagatttcagtctcatttattaatctttcat 23290976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 459 - 544
Target Start/End: Complemental strand, 32702460 - 32702375
Alignment:
Q  459 tcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaacctttcat 544  Q
    |||||||||||||||||||||| |||||||||||||||| ||||||||| |||||||||||||||||||||||||||| |||||||    
T  32702460 tcaagaatgattttataagaaaaattcaagaatgacatgacacaataattacctttagatttcagtctcatttattaatctttcat 32702375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 459 - 544
Target Start/End: Original strand, 33695136 - 33695221
Alignment:
Q  459 tcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaacctttcat 544  Q
    |||||||||||||||||||||| ||| |||||||| ||| |||||||||||||||||||||||||||||||||||||| |||||||    
T  33695136 tcaagaatgattttataagaaatatttaagaatgatatgtcacaataatcacctttagatttcagtctcatttattaatctttcat 33695221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 475 - 544
Target Start/End: Original strand, 18889470 - 18889539
Alignment:
Q  475 aagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaacctttcat 544  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  18889470 aagaatgattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcat 18889539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 459 - 534
Target Start/End: Original strand, 11548399 - 11548474
Alignment:
Q  459 tcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttatt 534  Q
    |||||||||||||   ||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  11548399 tcaagaatgatttatcaagaacgattcaagaatgacatggcacaataatcacccttagatttcagtctcatttatt 11548474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 459 - 544
Target Start/End: Complemental strand, 29693701 - 29693615
Alignment:
Q  459 tcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaacctttcat 544  Q
    |||||||||||||||| |||||||||| ||||||||||||||| |||||| ||| |||||||||||||| |||||||| ||||||||    
T  29693701 tcaagaatgattttatcaagaaagatttaagaatgacatggcagaataatgacccttagatttcagtcttatttattatcctttcat 29693615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 485 - 544
Target Start/End: Complemental strand, 6127506 - 6127447
Alignment:
Q  485 caagaatgacatggcacaataatcacctttagatttcagtctcatttattaacctttcat 544  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||    
T  6127506 caagaatgacatggcacaataatcacttttagatttcagtctcatttattaatctttcat 6127447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 459 - 510
Target Start/End: Original strand, 34238897 - 34238948
Alignment:
Q  459 tcaagaatgattttataagaaagattcaagaatgacatggcacaataatcac 510  Q
    |||||||||||||||| |  ||||||||||||||||||| ||||||||||||    
T  34238897 tcaagaatgattttatcaagaagattcaagaatgacatgacacaataatcac 34238948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 478 - 544
Target Start/End: Original strand, 8515556 - 8515622
Alignment:
Q  478 aaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaacctttcat 544  Q
    ||||||| || |||||||||| | |||||||||  |||||||||||||| |||||||||| ||||||    
T  8515556 aaagatttaaaaatgacatggtagaataatcactcttagatttcagtcttatttattaacatttcat 8515622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 459 - 520
Target Start/End: Complemental strand, 33695377 - 33695315
Alignment:
Q  459 tcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagattt 520  Q
    ||||||| |||||||| ||||||  |||||||||||||||||| |||||||||| ||||||||    
T  33695377 tcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 33695315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 459 - 520
Target Start/End: Original strand, 33696711 - 33696773
Alignment:
Q  459 tcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagattt 520  Q
    ||||||| |||||||| ||||||  |||||||||||||||||| |||||||||| ||||||||    
T  33696711 tcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 33696773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 475 - 520
Target Start/End: Complemental strand, 11548621 - 11548576
Alignment:
Q  475 aagaaagattcaagaatgacatggcacaataatcacctttagattt 520  Q
    |||||| ||||||||||||||||||| |||||||||| ||||||||    
T  11548621 aagaaaaattcaagaatgacatggcagaataatcacccttagattt 11548576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 512 - 544
Target Start/End: Original strand, 9752109 - 9752141
Alignment:
Q  512 tttagatttcagtctcatttattaacctttcat 544  Q
    |||||||||||||||||||||||||||||||||    
T  9752109 tttagatttcagtctcatttattaacctttcat 9752141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 459 - 520
Target Start/End: Original strand, 6127290 - 6127352
Alignment:
Q  459 tcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagattt 520  Q
    ||||||| |||||||| ||||||  || ||||||||||||||| |||||||||| ||||||||    
T  6127290 tcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatcacccttagattt 6127352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 459 - 520
Target Start/End: Complemental strand, 23291134 - 23291072
Alignment:
Q  459 tcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagattt 520  Q
    ||||||| |||||||| ||||||  || ||||||||||||||| |||||||||| ||||||||    
T  23291134 tcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatcacccttagattt 23291072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 459 - 522
Target Start/End: Original strand, 582537 - 582602
Alignment:
Q  459 tcaagaatgatttta-taagaaagattcaagaatgacat-ggcacaataatcacctttagatttca 522  Q
    ||||||||||||||| ||||||| ||| |||||||| || |||| |||||||||| ||||||||||    
T  582537 tcaagaatgattttattaagaaaaatttaagaatgatatgggcagaataatcaccattagatttca 582602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 475 - 520
Target Start/End: Complemental strand, 9752278 - 9752233
Alignment:
Q  475 aagaaagattcaagaatgacatggcacaataatcacctttagattt 520  Q
    |||||| |||||||||||| |||||| |||||||||| ||||||||    
T  9752278 aagaaaaattcaagaatgatatggcagaataatcacccttagattt 9752233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 459 - 510
Target Start/End: Complemental strand, 8515775 - 8515723
Alignment:
Q  459 tcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcac 510  Q
    ||||||| |||||||| |||| ||||| ||||||||||||||| |||||||||    
T  8515775 tcaagaaagattttatcaagacagatttaagaatgacatggcagaataatcac 8515723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 459 - 510
Target Start/End: Original strand, 25986945 - 25986997
Alignment:
Q  459 tcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcac 510  Q
    ||||||| |||||||| ||||||  |||||||||||||||||| |||||||||    
T  25986945 tcaagaaagattttattaagaaaatttcaagaatgacatggcaaaataatcac 25986997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 78; Significance: 5e-36; HSPs: 48)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 459 - 544
Target Start/End: Complemental strand, 22199514 - 22199429
Alignment:
Q  459 tcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaacctttcat 544  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  22199514 tcaagaatgattttataagaaagatccaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcat 22199429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 459 - 544
Target Start/End: Complemental strand, 36073604 - 36073519
Alignment:
Q  459 tcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaacctttcat 544  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  36073604 tcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcat 36073519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 459 - 544
Target Start/End: Complemental strand, 46442099 - 46442014
Alignment:
Q  459 tcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaacctttcat 544  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  46442099 tcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcat 46442014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 459 - 534
Target Start/End: Original strand, 10442597 - 10442672
Alignment:
Q  459 tcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttatt 534  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10442597 tcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttatt 10442672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 459 - 544
Target Start/End: Complemental strand, 2625092 - 2625007
Alignment:
Q  459 tcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaacctttcat 544  Q
    ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||| |||||||    
T  2625092 tcaagaatgattttataagaaagattcaaaaatgacatagcacaataatcacctttagatttcagtctcatttattaatctttcat 2625007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 459 - 544
Target Start/End: Complemental strand, 9089125 - 9089040
Alignment:
Q  459 tcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaacctttcat 544  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||    
T  9089125 tcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcatctttagatttcagtctcatttattaatctttcat 9089040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 459 - 544
Target Start/End: Original strand, 21802130 - 21802215
Alignment:
Q  459 tcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaacctttcat 544  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||| |||||||    
T  21802130 tcaagaatgattttataagaaagattcaagaatgacatgacacaataatcacccttagatttcagtctcatttattaatctttcat 21802215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 459 - 544
Target Start/End: Original strand, 44893023 - 44893108
Alignment:
Q  459 tcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaacctttcat 544  Q
    |||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  44893023 tcaagaatgattttataagaaaaatttaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcat 44893108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 459 - 544
Target Start/End: Complemental strand, 44893681 - 44893596
Alignment:
Q  459 tcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaacctttcat 544  Q
    |||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  44893681 tcaagaatgattttataagaaaaatttaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcat 44893596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 459 - 544
Target Start/End: Original strand, 49387697 - 49387782
Alignment:
Q  459 tcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaacctttcat 544  Q
    ||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  49387697 tcaaggatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcat 49387782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 459 - 544
Target Start/End: Complemental strand, 53123286 - 53123201
Alignment:
Q  459 tcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaacctttcat 544  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||    
T  53123286 tcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcatctttagatttcagtctcatttattaatctttcat 53123201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 459 - 536
Target Start/End: Original strand, 7744922 - 7744999
Alignment:
Q  459 tcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaa 536  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||    
T  7744922 tcaagaatgattttataagaaagattcaagaatgacattgcacaataatcacctttagatttcaatctcatttattaa 7744999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 459 - 544
Target Start/End: Original strand, 33530494 - 33530579
Alignment:
Q  459 tcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaacctttcat 544  Q
    |||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||    
T  33530494 tcaagaatgattttataaaaaagatccaagaatgacatggcacaataatcacctttagatttcagtcttatttattaatctttcat 33530579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 459 - 544
Target Start/End: Complemental strand, 36073206 - 36073121
Alignment:
Q  459 tcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaacctttcat 544  Q
    |||| ||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||    
T  36073206 tcaaaaatgattttataagaaaaattcaagaatgacatggcacaataaccacctttagatttcagtctcatttattaatctttcat 36073121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 459 - 544
Target Start/End: Complemental strand, 47290321 - 47290236
Alignment:
Q  459 tcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaacctttcat 544  Q
    |||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||  |||||||    
T  47290321 tcaagaatgattttataagaaaaattcaagaatgacatggtacaataatcacctttagatttcagtctcatttattattctttcat 47290236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 459 - 544
Target Start/End: Complemental strand, 4751702 - 4751617
Alignment:
Q  459 tcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaacctttcat 544  Q
    |||||||| ||||||||||||| ||| ||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||    
T  4751702 tcaagaataattttataagaaaaatttaagaatgacatggcacaataaccacctttagatttcagtctcatttattaatctttcat 4751617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 459 - 544
Target Start/End: Original strand, 23964274 - 23964359
Alignment:
Q  459 tcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaacctttcat 544  Q
    |||||||||||||||||||||||||| ||||||||||||||| |||||||| |||||||||||| ||||||||||||| |||||||    
T  23964274 tcaagaatgattttataagaaagatttaagaatgacatggcataataatcatctttagatttcaatctcatttattaatctttcat 23964359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 459 - 544
Target Start/End: Complemental strand, 24128494 - 24128409
Alignment:
Q  459 tcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaacctttcat 544  Q
    |||||||||||||||||||||| ||| |||||||||||| ||||||||| |||||||||||||||||||||||||||| |||||||    
T  24128494 tcaagaatgattttataagaaaaatttaagaatgacatgacacaataattacctttagatttcagtctcatttattaatctttcat 24128409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 459 - 544
Target Start/End: Original strand, 31078629 - 31078714
Alignment:
Q  459 tcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaacctttcat 544  Q
    |||||||||||||||||| ||| |||||||||||||||||||||||||||| |||||||||||| ||||||||||||| |||||||    
T  31078629 tcaagaatgattttataaaaaaaattcaagaatgacatggcacaataatcatctttagatttcaatctcatttattaatctttcat 31078714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 459 - 544
Target Start/End: Original strand, 50156389 - 50156473
Alignment:
Q  459 tcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaacctttcat 544  Q
    |||||||||||||||||||||| |||||||||||||||| || |||||||||| |||||||||||||||||||||||| |||||||    
T  50156389 tcaagaatgattttataagaaaaattcaagaatgacatgacataataatcacc-ttagatttcagtctcatttattaatctttcat 50156473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 461 - 544
Target Start/End: Complemental strand, 17655684 - 17655600
Alignment:
Q  461 aagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaacctttcat 544  Q
    |||||||||||||| |||||||||| |||||||||||| || |||||| ||||||||||||||||||||||||||||||||||||    
T  17655684 aagaatgattttatcaagaaagatttaagaatgacatgacataataattacctttagatttcagtctcatttattaacctttcat 17655600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 459 - 544
Target Start/End: Complemental strand, 37219887 - 37219801
Alignment:
Q  459 tcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaacctttcat 544  Q
    |||||||||||||||| |||||||||| ||||||||||||||| |||||||| | |||||||||| ||| |||||||||||||||||    
T  37219887 tcaagaatgattttatcaagaaagatttaagaatgacatggcagaataatcatccttagatttcaatcttatttattaacctttcat 37219801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 475 - 544
Target Start/End: Complemental strand, 30563448 - 30563379
Alignment:
Q  475 aagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaacctttcat 544  Q
    ||||||||||||||||||||||| ||||||||||||  |||||||||||||| |||||||||||||||||    
T  30563448 aagaaagattcaagaatgacatgacacaataatcacacttagatttcagtcttatttattaacctttcat 30563379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 459 - 541
Target Start/End: Original strand, 11314061 - 11314144
Alignment:
Q  459 tcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaaccttt 541  Q
    |||||||||||||||| ||||||||| ||||||||||||| ||||||||||||| |||||||  ||||| ||||||||||||||    
T  11314061 tcaagaatgattttatcaagaaagatgcaagaatgacatgacacaataatcacccttagattatagtcttatttattaaccttt 11314144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 466 - 544
Target Start/End: Original strand, 37934758 - 37934837
Alignment:
Q  466 tgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaacctttcat 544  Q
    ||||||||| ||||||||||||| ||||| ||| ||||||||||||| |||||||||| |||||||||||||||||||||    
T  37934758 tgattttattaagaaagattcaataatgatatgacacaataatcacccttagatttcaatctcatttattaacctttcat 37934837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 459 - 542
Target Start/End: Complemental strand, 42671924 - 42671840
Alignment:
Q  459 tcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaacctttc 542  Q
    |||||||||||||||| ||||||||||||||||||||||| || ||||||||   |||||||| |||||||||| ||||||||||    
T  42671924 tcaagaatgattttatcaagaaagattcaagaatgacatgacataataatcattcttagatttgagtctcatttgttaacctttc 42671840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 459 - 534
Target Start/End: Complemental strand, 24392929 - 24392854
Alignment:
Q  459 tcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttatt 534  Q
    |||||||||||||   |||||| ||| ||||||||||| |||||||||||| | ||||||||||||||||||||||    
T  24392929 tcaagaatgatttatcaagaaatatttaagaatgacatagcacaataatcatccttagatttcagtctcatttatt 24392854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 459 - 520
Target Start/End: Complemental strand, 33530738 - 33530676
Alignment:
Q  459 tcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagattt 520  Q
    ||||||| |||||||| |||||| ||||||||||||||||||| |||||||||| ||||||||    
T  33530738 tcaagaaagattttatcaagaaaaattcaagaatgacatggcagaataatcacccttagattt 33530676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 459 - 510
Target Start/End: Original strand, 25063384 - 25063436
Alignment:
Q  459 tcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcac 510  Q
    |||||||||||||||| |||||||||||||||||||||||| | |||||||||    
T  25063384 tcaagaatgattttatcaagaaagattcaagaatgacatggtagaataatcac 25063436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 479 - 539
Target Start/End: Complemental strand, 44744667 - 44744607
Alignment:
Q  479 aagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaacct 539  Q
    ||||||||||||||||||| | ||||||| | | |||||||||||||| ||||||||||||    
T  44744667 aagattcaagaatgacatgactcaataattatccttagatttcagtcttatttattaacct 44744607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 459 - 520
Target Start/End: Complemental strand, 10442839 - 10442777
Alignment:
Q  459 tcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagattt 520  Q
    ||||||| |||||||| ||||||  |||||||||||||||||| |||||||||| ||||||||    
T  10442839 tcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 10442777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 459 - 520
Target Start/End: Complemental strand, 31078869 - 31078807
Alignment:
Q  459 tcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagattt 520  Q
    ||||||| |||||||| ||||||  |||||||||||||||||| |||||||||| ||||||||    
T  31078869 tcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 31078807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 459 - 520
Target Start/End: Complemental strand, 36073793 - 36073731
Alignment:
Q  459 tcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagattt 520  Q
    ||||||| |||||||| |||||||||| |||||||||||| || ||||||||| |||||||||    
T  36073793 tcaagaaagattttatgaagaaagatttaagaatgacatgacaaaataatcacttttagattt 36073731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 459 - 520
Target Start/End: Complemental strand, 49387938 - 49387876
Alignment:
Q  459 tcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagattt 520  Q
    ||||||| |||||||| ||||||  |||||||||||||||||| |||||||||| ||||||||    
T  49387938 tcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 49387876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 464 - 536
Target Start/End: Original strand, 36073276 - 36073349
Alignment:
Q  464 aatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaa 536  Q
    ||||||||||| |||||||||| |||||||| ||| || |||||| ||  |||||||||||||| |||||||||    
T  36073276 aatgattttatcaagaaagatttaagaatgatatgccagaataattactcttagatttcagtcttatttattaa 36073349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 469 - 520
Target Start/End: Original strand, 46441870 - 46441921
Alignment:
Q  469 ttttataagaaagattcaagaatgacatggcacaataatcacctttagattt 520  Q
    |||| |||||||  |||||||||||||||||| |||||||||| ||||||||    
T  46441870 ttttttaagaaaatttcaagaatgacatggcaaaataatcacccttagattt 46441921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 459 - 520
Target Start/End: Original strand, 2624852 - 2624914
Alignment:
Q  459 tcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagattt 520  Q
    ||||||| |||||||| ||||||  ||||||||||| |||||| |||||||||| ||||||||    
T  2624852 tcaagaaagattttatcaagaaaatttcaagaatgaaatggcagaataatcacccttagattt 2624914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 459 - 520
Target Start/End: Complemental strand, 7745162 - 7745100
Alignment:
Q  459 tcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagattt 520  Q
    ||||||| |||||||| ||||||  || ||||||||||||||| |||||||||| ||||||||    
T  7745162 tcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatcacccttagattt 7745100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 474 - 520
Target Start/End: Original strand, 17655461 - 17655507
Alignment:
Q  474 taagaaagattcaagaatgacatggcacaataatcacctttagattt 520  Q
    |||||||  |||||||||||||||||| |||||||||| ||||||||    
T  17655461 taagaaaatttcaagaatgacatggcagaataatcacccttagattt 17655507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 459 - 520
Target Start/End: Complemental strand, 21802372 - 21802310
Alignment:
Q  459 tcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagattt 520  Q
    |||||||  ||||||| ||||||  |||||||||||||||||| |||||||||| ||||||||    
T  21802372 tcaagaaatattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 21802310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 459 - 520
Target Start/End: Original strand, 22199276 - 22199338
Alignment:
Q  459 tcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagattt 520  Q
    ||||||| |||||||| ||||||  |||||||||||||||||| |||||||| | ||||||||    
T  22199276 tcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcagccttagattt 22199338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 459 - 520
Target Start/End: Original strand, 24392682 - 24392744
Alignment:
Q  459 tcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagattt 520  Q
    ||||||| |||||| | |||||| ||||||||||||||||||| |||||||||| ||| ||||    
T  24392682 tcaagaaagattttctcaagaaaaattcaagaatgacatggcagaataatcacccttaaattt 24392744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 459 - 520
Target Start/End: Original strand, 36072962 - 36073024
Alignment:
Q  459 tcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagattt 520  Q
    ||||||| |||||||| ||||||  |||||||||||||||||| ||||| |||| ||||||||    
T  36072962 tcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataaccacccttagattt 36073024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 459 - 520
Target Start/End: Original strand, 47290081 - 47290143
Alignment:
Q  459 tcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagattt 520  Q
    ||||||| |||||| | ||||||  |||||||||||||||||| |||||||||| ||||||||    
T  47290081 tcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 47290143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 483 - 520
Target Start/End: Original strand, 9088910 - 9088947
Alignment:
Q  483 ttcaagaatgacatggcacaataatcacctttagattt 520  Q
    |||||||||||||||||| |||||||||| ||||||||    
T  9088910 ttcaagaatgacatggcagaataatcacccttagattt 9088947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 483 - 520
Target Start/End: Complemental strand, 44893238 - 44893201
Alignment:
Q  483 ttcaagaatgacatggcacaataatcacctttagattt 520  Q
    |||||||||||||||||| |||||||||| ||||||||    
T  44893238 ttcaagaatgacatggcagaataatcacccttagattt 44893201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 483 - 520
Target Start/End: Original strand, 44893466 - 44893503
Alignment:
Q  483 ttcaagaatgacatggcacaataatcacctttagattt 520  Q
    |||||||||||||||||| |||||||||| ||||||||    
T  44893466 ttcaagaatgacatggcagaataatcacccttagattt 44893503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 483 - 520
Target Start/End: Original strand, 53123071 - 53123108
Alignment:
Q  483 ttcaagaatgacatggcacaataatcacctttagattt 520  Q
    |||||||||||||||||| |||||||||| ||||||||    
T  53123071 ttcaagaatgacatggcagaataatcacccttagattt 53123108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 78; Significance: 5e-36; HSPs: 29)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 459 - 544
Target Start/End: Complemental strand, 33380462 - 33380377
Alignment:
Q  459 tcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaacctttcat 544  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  33380462 tcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcat 33380377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 459 - 544
Target Start/End: Complemental strand, 35161014 - 35160929
Alignment:
Q  459 tcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaacctttcat 544  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  35161014 tcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcat 35160929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 459 - 544
Target Start/End: Original strand, 9293385 - 9293470
Alignment:
Q  459 tcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaacctttcat 544  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||| |||||||    
T  9293385 tcaagaatgattttataagaaagattcaagaatgacatgacacaataatcacccttagatttcagtctcatttattaatctttcat 9293470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 459 - 544
Target Start/End: Complemental strand, 10662143 - 10662058
Alignment:
Q  459 tcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaacctttcat 544  Q
    |||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||    
T  10662143 tcaagaatgattttataagaaaaattcaagaatgacatgacacaataatcacctttagatttcagtctcatttattaatctttcat 10662058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 459 - 544
Target Start/End: Complemental strand, 13355103 - 13355018
Alignment:
Q  459 tcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaacctttcat 544  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||    
T  13355103 tcaagaatgattttataagaaagatccaagaatgacatggcacaataatcacttttagatttcagtctcatttattaatctttcat 13355018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 459 - 544
Target Start/End: Original strand, 23267872 - 23267957
Alignment:
Q  459 tcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaacctttcat 544  Q
    |||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  23267872 tcaagaatgattttataagaaaaatttaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcat 23267957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 459 - 544
Target Start/End: Complemental strand, 3989331 - 3989246
Alignment:
Q  459 tcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaacctttcat 544  Q
    ||||||||||||||||||||||||| ||||||||||||| ||||||||| |||||||||||||||||||||||||||| |||||||    
T  3989331 tcaagaatgattttataagaaagatccaagaatgacatgacacaataataacctttagatttcagtctcatttattaatctttcat 3989246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 459 - 544
Target Start/End: Original strand, 7475318 - 7475403
Alignment:
Q  459 tcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaacctttcat 544  Q
    |||||||||||||||||||||| |||||||||||| ||| || ||||||||||||||||||||||||||||||||||| |||||||    
T  7475318 tcaagaatgattttataagaaaaattcaagaatgatatgacataataatcacctttagatttcagtctcatttattaatctttcat 7475403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 459 - 544
Target Start/End: Original strand, 31174645 - 31174730
Alignment:
Q  459 tcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaacctttcat 544  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||| | ||||||||||||| ||||||||||||| |||||||    
T  31174645 tcaagaatgattttataagaaagattcaagaatgacatgacacaataaactcctttagatttcaatctcatttattaatctttcat 31174730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 459 - 534
Target Start/End: Complemental strand, 43331167 - 43331092
Alignment:
Q  459 tcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttatt 534  Q
    |||||||||||||   |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  43331167 tcaagaatgatttatcaagaaagattcaagaatgacatggtacaataatcacctttagatttcagtctcatttatt 43331092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 475 - 544
Target Start/End: Original strand, 16767288 - 16767357
Alignment:
Q  475 aagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaacctttcat 544  Q
    ||||||||||||||||||||||| ||||||||||||  ||||||||||||||||||||||||||||||||    
T  16767288 aagaaagattcaagaatgacatgacacaataatcactcttagatttcagtctcatttattaacctttcat 16767357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 459 - 544
Target Start/End: Complemental strand, 22592968 - 22592880
Alignment:
Q  459 tcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttaga--tttcagtctcatttattaacctttcat 544  Q
    |||||||||||||||| ||||||||||||||||||||||| ||||||||||||| |||||  ||||||||| |||||||||||||||||    
T  22592968 tcaagaatgattttatcaagaaagattcaagaatgacatgacacaataatcacccttagatttttcagtcttatttattaacctttcat 22592880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 475 - 544
Target Start/End: Complemental strand, 21936321 - 21936252
Alignment:
Q  475 aagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaacctttcat 544  Q
    ||||| ||| |||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||    
T  21936321 aagaatgatccaagaatgacatggcacaataatcacctttagatttcagtttcatttattaatctttcat 21936252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 483 - 534
Target Start/End: Original strand, 34320991 - 34321042
Alignment:
Q  483 ttcaagaatgacatggcacaataatcacctttagatttcagtctcatttatt 534  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  34320991 ttcaagaatgacatggcacaataatcacccttagatttcagtctcatttatt 34321042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 459 - 544
Target Start/End: Complemental strand, 9723662 - 9723576
Alignment:
Q  459 tcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaacctttcat 544  Q
    ||||||||||||| || |||||| ||| |||||||||||| || ||||||||||||||||||||||||| ||||||| || ||||||    
T  9723662 tcaagaatgatttgatcaagaaatatttaagaatgacatgacagaataatcacctttagatttcagtcttatttattcacttttcat 9723576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 459 - 534
Target Start/End: Original strand, 21393496 - 21393570
Alignment:
Q  459 tcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttatt 534  Q
    |||||||||||||   |||||| |||||||||||||||| ||||||||||||| ||| ||||||||||||||||||    
T  21393496 tcaagaatgatttatcaagaaa-attcaagaatgacatgacacaataatcacccttaaatttcagtctcatttatt 21393570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 459 - 520
Target Start/End: Complemental strand, 14941416 - 14941354
Alignment:
Q  459 tcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagattt 520  Q
    ||||||| |||||||| |||||||||||||||||||||||||| |||||||||| ||||||||    
T  14941416 tcaagaaagattttattaagaaagattcaagaatgacatggcagaataatcacccttagattt 14941354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 465 - 534
Target Start/End: Complemental strand, 37335894 - 37335824
Alignment:
Q  465 atgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttatt 534  Q
    |||||||||| |||||||||| || ||||||||| |||| |||||||| ||||||||||||||||||||||    
T  37335894 atgattttatcaagaaagatttaataatgacatgacacagtaatcacccttagatttcagtctcatttatt 37335824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 484 - 544
Target Start/End: Original strand, 14941199 - 14941259
Alignment:
Q  484 tcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaacctttcat 544  Q
    |||||||||||||| ||||||||||| | |||||||||| ||| |||||||||||||||||    
T  14941199 tcaagaatgacatgacacaataatcatccttagatttcaatcttatttattaacctttcat 14941259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 474 - 519
Target Start/End: Original strand, 37335744 - 37335789
Alignment:
Q  474 taagaaagattcaagaatgacatggcacaataatcacctttagatt 519  Q
    ||||||||||||||||||||||||||| ||||||||| ||||||||    
T  37335744 taagaaagattcaagaatgacatggcagaataatcacttttagatt 37335789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 461 - 520
Target Start/End: Original strand, 27847649 - 27847709
Alignment:
Q  461 aagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagattt 520  Q
    ||||| |||||||| ||||||||||||||||||||||| || |||||||||| ||||||||    
T  27847649 aagaaagattttattaagaaagattcaagaatgacatgacagaataatcaccgttagattt 27847709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 459 - 520
Target Start/End: Complemental strand, 9293626 - 9293564
Alignment:
Q  459 tcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagattt 520  Q
    ||||||| |||||||| ||||||  |||||||||||||||||| |||||||||| ||||||||    
T  9293626 tcaagaaagattttatcaagaaattttcaagaatgacatggcagaataatcacccttagattt 9293564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 459 - 520
Target Start/End: Complemental strand, 31174884 - 31174822
Alignment:
Q  459 tcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagattt 520  Q
    ||||||| |||||||| ||||||  |||||||||||||||||| |||||||||| ||||||||    
T  31174884 tcaagaaagattttattaagaaaatttcaagaatgacatggcagaataatcacccttagattt 31174822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 459 - 520
Target Start/End: Original strand, 10661902 - 10661964
Alignment:
Q  459 tcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagattt 520  Q
    ||||||| |||||||| ||||||  || ||||||||||||||| |||||||||| ||||||||    
T  10661902 tcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatcacccttagattt 10661964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 459 - 520
Target Start/End: Original strand, 21936096 - 21936158
Alignment:
Q  459 tcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagattt 520  Q
    ||||||| |||||||| ||||||  ||||||||||| |||||| |||||||||| ||||||||    
T  21936096 tcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatcacccttagattt 21936158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 459 - 520
Target Start/End: Complemental strand, 23268112 - 23268050
Alignment:
Q  459 tcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagattt 520  Q
    ||||||| |||||| | ||||||  |||||||||||||||||| |||||||||| ||||||||    
T  23268112 tcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 23268050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 459 - 520
Target Start/End: Original strand, 35160772 - 35160834
Alignment:
Q  459 tcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagattt 520  Q
    ||||||| |||||||| ||||||  || ||||||||||||||| |||||||||| ||||||||    
T  35160772 tcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatcacccttagattt 35160834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 482 - 520
Target Start/End: Original strand, 43330951 - 43330989
Alignment:
Q  482 attcaagaatgacatggcacaataatcacctttagattt 520  Q
    ||||||||||||||||||| |||||||||| ||||||||    
T  43330951 attcaagaatgacatggcagaataatcacccttagattt 43330989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 461 - 520
Target Start/End: Original strand, 9723422 - 9723482
Alignment:
Q  461 aagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagattt 520  Q
    ||||| |||||||| |||||||||| |||||||||||| || |||||||||| ||| ||||    
T  9723422 aagaaagattttattaagaaagatttaagaatgacatgacagaataatcacccttaaattt 9723482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 78; Significance: 5e-36; HSPs: 31)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 459 - 544
Target Start/End: Complemental strand, 19015659 - 19015574
Alignment:
Q  459 tcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaacctttcat 544  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  19015659 tcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcat 19015574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 459 - 544
Target Start/End: Original strand, 20304940 - 20305025
Alignment:
Q  459 tcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaacctttcat 544  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||    
T  20304940 tcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttatcaatctttcat 20305025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 459 - 536
Target Start/End: Complemental strand, 40215243 - 40215166
Alignment:
Q  459 tcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaa 536  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40215243 tcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaa 40215166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 459 - 544
Target Start/End: Complemental strand, 51737760 - 51737675
Alignment:
Q  459 tcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaacctttcat 544  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  51737760 tcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcat 51737675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 459 - 544
Target Start/End: Complemental strand, 18404703 - 18404618
Alignment:
Q  459 tcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaacctttcat 544  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||    
T  18404703 tcaagaatgattttataagaaagatttaagaatgacatggcacaataatcacatttagatttcagtctcatttattaatctttcat 18404618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 459 - 544
Target Start/End: Complemental strand, 25463931 - 25463846
Alignment:
Q  459 tcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaacctttcat 544  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||    
T  25463931 tcaagaatgattttataagaaagatccaagaatgacatggcacaataatcacctttagatttaagtctcatttattaatctttcat 25463846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 459 - 544
Target Start/End: Original strand, 36966518 - 36966603
Alignment:
Q  459 tcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaacctttcat 544  Q
    |||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  36966518 tcaagaatgattttataagaaaaattcaagaataacatggcacaataatcacctttagatttcagtctcatttattaatctttcat 36966603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 459 - 544
Target Start/End: Original strand, 37821644 - 37821729
Alignment:
Q  459 tcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaacctttcat 544  Q
    |||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||    
T  37821644 tcaagaatgattttataagaaaaattcaagaatgacatgacacaataatcacctttagatttcagtctcatttattaatctttcat 37821729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 459 - 544
Target Start/End: Original strand, 41876252 - 41876337
Alignment:
Q  459 tcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaacctttcat 544  Q
    |||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||    
T  41876252 tcaagaatgattttataagaaaaattcaagaatgacatagcacaataatcacctttagatttcagtctcatttattaatctttcat 41876337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 459 - 544
Target Start/End: Complemental strand, 6883742 - 6883657
Alignment:
Q  459 tcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaacctttcat 544  Q
    |||||||||||||||||||||| ||||||||||||||||||| |||| |||||||||||||||||||||||||||||| |||||||    
T  6883742 tcaagaatgattttataagaaaaattcaagaatgacatggcataatattcacctttagatttcagtctcatttattaatctttcat 6883657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 459 - 544
Target Start/End: Original strand, 9910101 - 9910186
Alignment:
Q  459 tcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaacctttcat 544  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| || ||||||||| |||||||    
T  9910101 tcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagacttatttattaatctttcat 9910186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 459 - 544
Target Start/End: Complemental strand, 25973662 - 25973577
Alignment:
Q  459 tcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaacctttcat 544  Q
    |||||||||||||||||||||| |||||||||||||||| ||||||||||||||||| |||||||||||||||||||| |||||||    
T  25973662 tcaagaatgattttataagaaaaattcaagaatgacatgacacaataatcacctttaaatttcagtctcatttattaatctttcat 25973577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 459 - 544
Target Start/End: Complemental strand, 44094952 - 44094867
Alignment:
Q  459 tcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaacctttcat 544  Q
    |||||||| |||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||    
T  44094952 tcaagaattattttataagaaagatccaagaatgacatgacacaataatcacctttagatttcagtctcatttattaatctttcat 44094867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 459 - 544
Target Start/End: Complemental strand, 3559872 - 3559787
Alignment:
Q  459 tcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaacctttcat 544  Q
    ||||||||||||||||||||||||| ||||||||| ||| ||||||||||||||||| |||||||||||||||||||| |||||||    
T  3559872 tcaagaatgattttataagaaagatccaagaatgatatgacacaataatcacctttatatttcagtctcatttattaatctttcat 3559787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 459 - 534
Target Start/End: Original strand, 32000076 - 32000151
Alignment:
Q  459 tcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttatt 534  Q
    |||||||||||||   ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  32000076 tcaagaatgatttatcaagaaagattcaagaatgacatggcacaataatcacccttagatttcagtctcatttatt 32000151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 459 - 534
Target Start/End: Original strand, 33786441 - 33786516
Alignment:
Q  459 tcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttatt 534  Q
    |||||||||||||   ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  33786441 tcaagaatgatttatcaagaaagattcaagaatgacatggcacaataatcacccttagatttcagtctcatttatt 33786516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 459 - 520
Target Start/End: Original strand, 19722909 - 19722970
Alignment:
Q  459 tcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagattt 520  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  19722909 tcaagaatgattttataagaaagattcaagaatgacatgacacaataatcacctttagattt 19722970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 459 - 534
Target Start/End: Complemental strand, 40273963 - 40273888
Alignment:
Q  459 tcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttatt 534  Q
    |||||||||||||   |||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  40273963 tcaagaatgatttatcaagaaatattcaagaatgacatggcacaataatcacccttagatttcagtctcatttatt 40273888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 459 - 541
Target Start/End: Original strand, 44690831 - 44690914
Alignment:
Q  459 tcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaaccttt 541  Q
    |||| ||||||||||| |||||||||||||||||||||||||| |||||||||| ||||||| |||||| ||||||||| ||||    
T  44690831 tcaataatgattttatcaagaaagattcaagaatgacatggcagaataatcacccttagattccagtcttatttattaatcttt 44690914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 459 - 520
Target Start/End: Complemental strand, 33786684 - 33786623
Alignment:
Q  459 tcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagattt 520  Q
    |||||||||||||   ||||||||||||||||||||||||||||||||||||| ||| ||||    
T  33786684 tcaagaatgatttatcaagaaagattcaagaatgacatggcacaataatcacccttaaattt 33786623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 481 - 544
Target Start/End: Complemental strand, 52329508 - 52329445
Alignment:
Q  481 gattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaacctttcat 544  Q
    |||||||||||||||| ||| |||||||||| |||||||||||||| | |||||||| ||||||    
T  52329508 gattcaagaatgacatagcagaataatcacccttagatttcagtcttaattattaacgtttcat 52329445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 459 - 544
Target Start/End: Original strand, 27523065 - 27523151
Alignment:
Q  459 tcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaacctttcat 544  Q
    |||||||||||||||| |||||||||||||||||   |||||| | |||||||| || ||||| ||||| |||||||||| ||||||    
T  27523065 tcaagaatgattttatcaagaaagattcaagaatcgtatggcagattaatcaccctttgattttagtcttatttattaacttttcat 27523151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 461 - 536
Target Start/End: Complemental strand, 10167653 - 10167577
Alignment:
Q  461 aagaatgattttataagaaag-attcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaa 536  Q
    |||||||||||||||| |||  ||| |||||| | |||  ||||||||||||||||||||||||||| |||||||||    
T  10167653 aagaatgattttataaaaaaatatttaagaataatatgatacaataatcacctttagatttcagtcttatttattaa 10167577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 459 - 520
Target Start/End: Complemental strand, 16045848 - 16045786
Alignment:
Q  459 tcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagattt 520  Q
    ||||||| |||||||| ||||||  |||||||||||||||||| |||||||||| ||||||||    
T  16045848 tcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 16045786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 459 - 520
Target Start/End: Original strand, 40215003 - 40215065
Alignment:
Q  459 tcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagattt 520  Q
    ||||||| |||||||| ||||||  |||||||||||||||||| |||||||||| ||||||||    
T  40215003 tcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 40215065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 469 - 520
Target Start/End: Original strand, 6883513 - 6883564
Alignment:
Q  469 ttttataagaaagattcaagaatgacatggcacaataatcacctttagattt 520  Q
    |||| |||||||  |||||||||||||||||| |||||||||| ||||||||    
T  6883513 ttttttaagaaaatttcaagaatgacatggcagaataatcacccttagattt 6883564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 459 - 520
Target Start/End: Original strand, 18404457 - 18404519
Alignment:
Q  459 tcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagattt 520  Q
    ||||||| |||||||| ||||||  || ||||||||||||| | |||||||||||||||||||    
T  18404457 tcaagaaagattttatcaagaaaattttaagaatgacatggtagaataatcacctttagattt 18404519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 459 - 520
Target Start/End: Original strand, 25463691 - 25463753
Alignment:
Q  459 tcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagattt 520  Q
    ||||||| |||||||| ||||||  || ||||||||||||||| |||||||||| ||||||||    
T  25463691 tcaagaaagattttatgaagaaaattttaagaatgacatggcagaataatcacccttagattt 25463753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 459 - 520
Target Start/End: Original strand, 40273717 - 40273779
Alignment:
Q  459 tcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagattt 520  Q
    ||||||| |||||| | |||||| |||||||||||||||| || |||||||||| ||||||||    
T  40273717 tcaagaaagattttttcaagaaaaattcaagaatgacatgtcaaaataatcacccttagattt 40273779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 459 - 520
Target Start/End: Original strand, 44094713 - 44094775
Alignment:
Q  459 tcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagattt 520  Q
    |||||||  ||||||| ||||||  |||||||||||||||||| |||||||||| ||||||||    
T  44094713 tcaagaaatattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 44094775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 459 - 516
Target Start/End: Original strand, 52064387 - 52064445
Alignment:
Q  459 tcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttag 516  Q
    |||| ||||||||||| ||||||||||||||||||||||| || |||| ||||| ||||    
T  52064387 tcaaaaatgattttatcaagaaagattcaagaatgacatgacagaatattcacccttag 52064445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178 (Bit Score: 74; Significance: 1e-33; HSPs: 2)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 459 - 544
Target Start/End: Complemental strand, 11876 - 11791
Alignment:
Q  459 tcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaacctttcat 544  Q
    |||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  11876 tcaagaatgattttataagaaaaatttaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcat 11791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 459 - 520
Target Start/End: Original strand, 11636 - 11698
Alignment:
Q  459 tcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagattt 520  Q
    ||||||| |||||||| ||||||  ||||||||||||||| || |||||||||| ||||||||    
T  11636 tcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatcacccttagattt 11698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085 (Bit Score: 74; Significance: 1e-33; HSPs: 2)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 459 - 544
Target Start/End: Complemental strand, 48104 - 48019
Alignment:
Q  459 tcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaacctttcat 544  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||| |||||||    
T  48104 tcaagaatgattttataagaaagattcaagaatgacatagcacaataatcatctttagatttcagtctcatttattaatctttcat 48019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 459 - 520
Target Start/End: Original strand, 47865 - 47927
Alignment:
Q  459 tcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagattt 520  Q
    ||||||| |||||||| ||||||  |||||||||||||||||| |||||||||| ||||||||    
T  47865 tcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 47927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204 (Bit Score: 70; Significance: 3e-31; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 459 - 544
Target Start/End: Complemental strand, 4651 - 4566
Alignment:
Q  459 tcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaacctttcat 544  Q
    |||||||||||||||||||||| ||| |||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||    
T  4651 tcaagaatgattttataagaaaaatttaagaatgatatggcacaataatcacctttagatttcagtctcatttattaatctttcat 4566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 70; Significance: 3e-31; HSPs: 2)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 459 - 544
Target Start/End: Complemental strand, 41265 - 41180
Alignment:
Q  459 tcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaacctttcat 544  Q
    ||||||||||||||||||||||||| ||||||||| |||| ||||||||||||||||||||||||||||||||||||| |||||||    
T  41265 tcaagaatgattttataagaaagatccaagaatgatatggtacaataatcacctttagatttcagtctcatttattaatctttcat 41180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 459 - 520
Target Start/End: Original strand, 41026 - 41088
Alignment:
Q  459 tcaagaatgattttataagaaagatt-caagaatgacatggcacaataatcacctttagattt 520  Q
    ||||||| |||||||| | ||| ||| |||||||||||||||| |||||||||| ||||||||    
T  41026 tcaagaaagattttatcaaaaaaatttcaagaatgacatggcagaataatcacccttagattt 41088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0471 (Bit Score: 66; Significance: 7e-29; HSPs: 1)
Name: scaffold0471
Description:

Target: scaffold0471; HSP #1
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 459 - 544
Target Start/End: Complemental strand, 13097 - 13012
Alignment:
Q  459 tcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaacctttcat 544  Q
    |||||||||||||||||||||| ||| |||||||||||| ||||||||| |||||||||||||||||||||||||||| |||||||    
T  13097 tcaagaatgattttataagaaaaatttaagaatgacatgacacaataattacctttagatttcagtctcatttattaatctttcat 13012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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