View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20437_low_11 (Length: 505)
Name: NF20437_low_11
Description: NF20437
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20437_low_11 |
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Alignment Details
Target: chr7 (Bit Score: 433; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 433; E-Value: 0
Query Start/End: Original strand, 1 - 484
Target Start/End: Original strand, 21916577 - 21917056
Alignment:
| Q |
1 |
ttgtttcatgatcattaaagaagccttcttattttcccgtaatcggaggaagttatgacactaatctcacttcagttaatagtgttgctgaactttagaa |
100 |
Q |
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||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
21916577 |
ttgtttcatgatcattaaagaagcctt---attttcccgtaatcggaggaagttatgacactaatctcacttcagttaatagtgttgctgaactttagaa |
21916673 |
T |
|
| Q |
101 |
aaagtcataaggatgcttagtgagcttaaaatcaatgtctaaaattcggaacaactaccaatatataggttaatatatggaaactagaaagttctaagga |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
21916674 |
aaagtcataaggatgcttagtgagcttaaaatcaatgtctaaaattcggaacaactaccaatatataggttaatatatggaaactagaaagttctaagga |
21916773 |
T |
|
| Q |
201 |
ataaaaggagaaacatggtcttgttctacctacaccttttagtgtggagctataattagggttaggaaataagaaaagtaaggaagtcaagtaagtgagc |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
21916774 |
ataaaaggagaaacatggtcttgttctacctacaccttttagtgtggagctataattagggttaggaaataagaaaagtaaggaagtcaagtaagtgagc |
21916873 |
T |
|
| Q |
301 |
cgtaaaagatcaaaataattggagaaaggggagaatttcttggattaacttagttaggattggttcaatttccaagtctctctttatgttggtattaggt |
400 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
21916874 |
cgtaaaagatcaaaataattggagaaaggggagaatttcttggattaacttagttaggattggttcaatttccaagtctctctttatgttggtattaggt |
21916973 |
T |
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| Q |
401 |
gttgtttatttannnnnnnggtacaaaaatgtgtgatacaatcatgtgttacttttccaagccatacgatgcaaaattctttcc |
484 |
Q |
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||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
21916974 |
gttgttt-ttcttttttttggtacaaaaatgtgtgatacaatcatgtgttacttttccaagccatacgatgcaaaattctttcc |
21917056 |
T |
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