View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20437_low_19 (Length: 422)

Name: NF20437_low_19
Description: NF20437
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20437_low_19
NF20437_low_19
[»] chr7 (1 HSPs)
chr7 (10-422)||(36568074-36568486)


Alignment Details
Target: chr7 (Bit Score: 413; Significance: 0; HSPs: 1)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 413; E-Value: 0
Query Start/End: Original strand, 10 - 422
Target Start/End: Original strand, 36568074 - 36568486
Alignment:
Q  10 caccacaacaacaataaccatacctttttccactatcatcatcatatttcctcttcttcaccaccttctcctcctctaagagaagaactacctcttttaa 109  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36568074 caccacaacaacaataaccatacctttttccactatcatcatcatatttcctcttcttcaccaccttctcctcctctaagagaagaactacctcttttaa 36568173  T
Q  110 acctaattccaacaaaacaagaaaaatatgatgaagatcaacaagaacatgaggtggatattcaagaccttccttgcactgccatggatttagaagaaag 209  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36568174 acctaattccaacaaaacaagaaaaatatgatgaagatcaacaagaacatgaggtggatattcaagaccttccttgcactgccatggatttagaagaaag 36568273  T
Q  210 ggaagaagatggtagtagtagaactactactgttactgttgcacttcacataggtttgccaaaccctagtgctgctgaaatggcttctgtactttcttcc 309  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36568274 ggaagaagatggtagtagtagaactactactgttactgttgcacttcacataggtttgccaaaccctagtgctgctgaaatggcttctgtactttcttcc 36568373  T
Q  310 tctaataactcctcagagatcattgtcactgataaagaacatggtggtgaggattcttgttcaggattcatggttaataataggcttaacaaaggacaat 409  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36568374 tctaataactcctcagagatcattgtcactgataaagaacatggtggtgaggattcttgttcaggattcatggttaataataggcttaacaaaggacaat 36568473  T
Q  410 attggatccctac 422  Q
    |||||||||||||    
T  36568474 attggatccctac 36568486  T

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