View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20437_low_41 (Length: 295)

Name: NF20437_low_41
Description: NF20437
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20437_low_41
NF20437_low_41
[»] chr2 (53 HSPs)
chr2 (1-280)||(43681949-43682228)
chr2 (17-231)||(5608734-5608953)
chr2 (17-243)||(9693870-9694101)
chr2 (11-243)||(32519174-32519411)
chr2 (17-243)||(28599452-28599683)
chr2 (53-239)||(4375614-4375801)
chr2 (74-231)||(41846532-41846690)
chr2 (6-243)||(37984741-37984983)
chr2 (74-243)||(22309559-22309729)
chr2 (11-243)||(16367091-16367328)
chr2 (11-243)||(17284762-17284991)
chr2 (74-243)||(17366712-17366878)
chr2 (11-243)||(20911149-20911386)
chr2 (74-243)||(9958953-9959123)
chr2 (98-243)||(17580438-17580584)
chr2 (11-228)||(1149956-1150178)
chr2 (95-243)||(8089559-8089708)
chr2 (74-179)||(45663701-45663806)
chr2 (60-135)||(18477113-18477188)
chr2 (74-180)||(22731724-22731830)
chr2 (112-179)||(20911130-20911197)
chr2 (112-180)||(10446831-10446899)
chr2 (112-180)||(17580327-17580395)
chr2 (112-179)||(1149937-1150004)
chr2 (112-179)||(9694059-9694126)
chr2 (112-179)||(16366963-16367030)
chr2 (112-179)||(17284743-17284810)
chr2 (150-240)||(19607049-19607140)
chr2 (112-179)||(32519155-32519222)
chr2 (113-179)||(22309749-22309815)
chr2 (159-243)||(18477035-18477120)
chr2 (111-180)||(20911445-20911514)
chr2 (112-176)||(8089455-8089519)
chr2 (112-180)||(17285052-17285120)
chr2 (112-179)||(1150254-1150321)
chr2 (112-179)||(22309431-22309498)
chr2 (112-179)||(32519472-32519539)
chr2 (112-179)||(41846392-41846459)
chr2 (118-180)||(28599750-28599812)
chr2 (4-53)||(22309636-22309685)
chr2 (118-179)||(22731855-22731916)
chr2 (112-168)||(16367280-16367336)
chr2 (112-176)||(19606920-19606984)
chr2 (111-179)||(43681856-43681924)
chr2 (112-180)||(45663825-45663893)
chr2 (6-41)||(20911272-20911307)
chr2 (10-53)||(22731743-22731786)
chr2 (11-53)||(9693954-9693996)
chr2 (112-176)||(9959142-9959206)
chr2 (112-179)||(17580641-17580709)
chr2 (112-176)||(18476910-18476974)
chr2 (112-176)||(28599430-28599494)
chr2 (11-88)||(43681875-43681956)
[»] chr5 (54 HSPs)
chr5 (11-243)||(22533518-22533755)
chr5 (74-241)||(27753609-27753777)
chr5 (17-243)||(34404509-34404740)
chr5 (11-241)||(21260884-21261118)
chr5 (18-243)||(41339482-41339711)
chr5 (10-243)||(25253104-25253342)
chr5 (11-243)||(33735441-33735678)
chr5 (10-243)||(25316894-25317133)
chr5 (18-243)||(8323082-8323312)
chr5 (10-239)||(18934731-18934965)
chr5 (10-221)||(16118101-16118317)
chr5 (101-243)||(18013725-18013868)
chr5 (74-243)||(7015637-7015807)
chr5 (11-239)||(32052356-32052589)
chr5 (12-243)||(6421750-6421986)
chr5 (102-243)||(12990902-12991044)
chr5 (102-243)||(13064523-13064665)
chr5 (17-188)||(22024054-22024229)
chr5 (18-241)||(37945020-37945248)
chr5 (160-243)||(9915503-9915587)
chr5 (112-179)||(22024187-22024254)
chr5 (112-180)||(12991105-12991173)
chr5 (112-179)||(25253403-25253470)
chr5 (112-179)||(25317194-25317261)
chr5 (112-179)||(32052541-32052608)
chr5 (112-179)||(33735630-33735697)
chr5 (90-167)||(12628317-12628394)
chr5 (112-180)||(13064726-13064794)
chr5 (111-179)||(22533390-22533458)
chr5 (112-179)||(14745448-14745515)
chr5 (112-179)||(34404484-34404551)
chr5 (112-178)||(21260866-21260932)
chr5 (192-243)||(20704917-20704969)
chr5 (112-179)||(32052224-32052291)
chr5 (112-179)||(37944994-37945061)
chr5 (112-179)||(37945311-37945377)
chr5 (11-53)||(16118163-16118205)
chr5 (112-178)||(25253087-25253153)
chr5 (112-178)||(25316877-25316943)
chr5 (111-179)||(7015508-7015576)
chr5 (112-180)||(7015826-7015894)
chr5 (112-176)||(16117964-16118028)
chr5 (113-180)||(8323374-8323441)
chr5 (11-53)||(13064732-13064774)
chr5 (112-178)||(18934714-18934780)
chr5 (11-53)||(27753691-27753733)
chr5 (127-180)||(9915430-9915483)
chr5 (112-165)||(22533707-22533760)
chr5 (118-179)||(31118955-31119016)
chr5 (112-176)||(6421625-6421689)
chr5 (112-176)||(6421939-6422003)
chr5 (112-168)||(14745630-14745686)
chr5 (112-177)||(20705029-20705096)
chr5 (9-41)||(25317018-25317050)
[»] chr4 (51 HSPs)
chr4 (11-243)||(8286951-8287188)
chr4 (11-231)||(35730801-35731026)
chr4 (53-243)||(489311-489503)
chr4 (53-243)||(515103-515295)
chr4 (74-239)||(37677980-37678146)
chr4 (74-243)||(12691492-12691662)
chr4 (11-236)||(19916791-19917021)
chr4 (97-241)||(22249863-22250008)
chr4 (18-236)||(34238496-34238718)
chr4 (10-243)||(47862170-47862408)
chr4 (53-231)||(27813114-27813292)
chr4 (74-239)||(53559473-53559639)
chr4 (97-241)||(20086567-20086712)
chr4 (74-243)||(13872197-13872367)
chr4 (74-242)||(33294230-33294398)
chr4 (101-241)||(54961544-54961685)
chr4 (76-212)||(48507502-48507638)
chr4 (10-231)||(50245997-50246224)
chr4 (98-230)||(47980795-47980928)
chr4 (11-243)||(20600966-20601203)
chr4 (17-241)||(32846387-32846614)
chr4 (74-178)||(26601270-26601374)
chr4 (112-179)||(13872069-13872136)
chr4 (112-180)||(47981953-47982021)
chr4 (112-181)||(47862150-47862219)
chr4 (112-180)||(37677847-37677915)
chr4 (112-176)||(48507734-48507798)
chr4 (112-179)||(8286932-8286999)
chr4 (112-179)||(8287250-8287317)
chr4 (112-179)||(20086437-20086504)
chr4 (120-179)||(35730662-35730721)
chr4 (112-179)||(53559704-53559771)
chr4 (112-181)||(19740858-19740927)
chr4 (111-180)||(19916972-19917041)
chr4 (112-177)||(54961748-54961813)
chr4 (112-180)||(12691405-12691473)
chr4 (112-176)||(12691722-12691786)
chr4 (113-181)||(13872387-13872455)
chr4 (112-168)||(35730978-35731034)
chr4 (112-179)||(33294460-33294527)
chr4 (112-175)||(34238474-34238537)
chr4 (112-179)||(54961431-54961498)
chr4 (113-179)||(22250051-22250117)
chr4 (113-181)||(37732397-37732465)
chr4 (112-179)||(22249733-22249800)
chr4 (118-177)||(47980687-47980746)
chr4 (112-179)||(50246175-50246242)
chr4 (112-178)||(32846363-32846429)
chr4 (11-53)||(48507740-48507782)
chr4 (112-177)||(37732299-37732364)
chr4 (10-54)||(26601287-26601331)
[»] chr1 (67 HSPs)
chr1 (10-243)||(24701398-24701635)
chr1 (18-243)||(46544859-46545089)
chr1 (60-243)||(30830259-30830443)
chr1 (11-243)||(6056395-6056632)
chr1 (20-243)||(10019501-10019729)
chr1 (11-243)||(46849786-46850023)
chr1 (65-243)||(26953229-26953408)
chr1 (11-241)||(33347546-33347781)
chr1 (74-242)||(51933903-51934072)
chr1 (53-243)||(35312104-35312295)
chr1 (74-280)||(12577103-12577310)
chr1 (11-241)||(49003005-49003240)
chr1 (6-243)||(5183634-5183876)
chr1 (95-243)||(25414972-25415121)
chr1 (77-241)||(52454885-52455050)
chr1 (18-239)||(48380707-48380933)
chr1 (11-243)||(2953592-2953829)
chr1 (11-243)||(37152666-37152903)
chr1 (74-243)||(739305-739474)
chr1 (74-242)||(8890338-8890507)
chr1 (74-243)||(1047290-1047460)
chr1 (74-243)||(19755533-19755703)
chr1 (17-243)||(29980766-29980997)
chr1 (98-231)||(46364715-46364849)
chr1 (74-243)||(29042841-29043011)
chr1 (6-229)||(33030348-33030576)
chr1 (74-243)||(34176051-34176222)
chr1 (74-227)||(49989881-49990033)
chr1 (95-241)||(5926650-5926798)
chr1 (74-148)||(6334906-6334980)
chr1 (112-181)||(2953781-2953850)
chr1 (112-181)||(29043072-29043141)
chr1 (112-181)||(49990113-49990182)
chr1 (112-179)||(24701270-24701337)
chr1 (112-179)||(46364574-46364641)
chr1 (118-181)||(46849981-46850044)
chr1 (74-154)||(1040384-1040464)
chr1 (112-179)||(1047521-1047588)
chr1 (118-181)||(5183829-5183892)
chr1 (161-231)||(6334796-6334867)
chr1 (112-179)||(49003192-49003259)
chr1 (112-174)||(5926524-5926586)
chr1 (112-178)||(29980955-29981021)
chr1 (113-179)||(33030334-33030400)
chr1 (112-178)||(37152855-37152921)
chr1 (112-180)||(2953463-2953531)
chr1 (111-179)||(12577010-12577078)
chr1 (111-179)||(46544760-46544828)
chr1 (112-176)||(49002879-49002943)
chr1 (128-179)||(6056376-6056427)
chr1 (112-179)||(19755722-19755789)
chr1 (112-179)||(25414844-25414911)
chr1 (112-179)||(26953101-26953168)
chr1 (112-179)||(33347733-33347800)
chr1 (112-179)||(48380681-48380748)
chr1 (112-182)||(34175919-34175989)
chr1 (112-181)||(5926838-5926907)
chr1 (111-176)||(35311977-35312042)
chr1 (112-179)||(739535-739602)
chr1 (112-179)||(24701586-24701653)
chr1 (10-53)||(26953312-26953355)
chr1 (10-53)||(29980849-29980892)
chr1 (113-168)||(46849669-46849724)
chr1 (112-173)||(37152544-37152605)
chr1 (5-41)||(1040440-1040476)
chr1 (5-41)||(1047346-1047382)
chr1 (17-53)||(25415062-25415098)
[»] scaffold0279 (2 HSPs)
scaffold0279 (18-243)||(10985-11215)
scaffold0279 (128-179)||(10853-10904)
[»] chr7 (44 HSPs)
chr7 (18-243)||(27557874-27558104)
chr7 (74-243)||(15827849-15828019)
chr7 (11-241)||(5636045-5636279)
chr7 (17-243)||(44545723-44545954)
chr7 (74-243)||(47081975-47082145)
chr7 (10-243)||(34454608-34454846)
chr7 (95-243)||(37563482-37563631)
chr7 (18-239)||(47121304-47121529)
chr7 (60-227)||(19980022-19980190)
chr7 (11-243)||(20947212-20947449)
chr7 (101-243)||(26825758-26825901)
chr7 (74-243)||(43938022-43938192)
chr7 (17-241)||(5280401-5280630)
chr7 (95-231)||(12928179-12928316)
chr7 (74-177)||(12929449-12929552)
chr7 (74-157)||(45586586-45586669)
chr7 (74-243)||(35262753-35262919)
chr7 (11-177)||(12930933-12931103)
chr7 (170-239)||(23191035-23191105)
chr7 (111-179)||(26825630-26825698)
chr7 (112-179)||(34454484-34454551)
chr7 (112-180)||(5280588-5280656)
chr7 (113-177)||(44545597-44545661)
chr7 (112-179)||(5280272-5280339)
chr7 (112-179)||(26825947-26826014)
chr7 (128-179)||(27558185-27558236)
chr7 (112-179)||(37563671-37563738)
chr7 (112-179)||(47081847-47081914)
chr7 (113-178)||(47121596-47121661)
chr7 (112-176)||(5636342-5636406)
chr7 (112-168)||(12931055-12931111)
chr7 (112-176)||(20947196-20947260)
chr7 (11-88)||(47081866-47081947)
chr7 (112-179)||(12928037-12928104)
chr7 (112-179)||(37563354-37563421)
chr7 (112-179)||(43937894-43937961)
chr7 (112-179)||(43938211-43938278)
chr7 (112-178)||(25049478-25049544)
chr7 (113-179)||(34454798-34454864)
chr7 (112-181)||(44545912-44545981)
chr7 (112-164)||(5636041-5636093)
chr7 (5-41)||(26825836-26825872)
chr7 (112-176)||(35262629-35262693)
chr7 (5-41)||(43938100-43938136)
[»] chr8 (64 HSPs)
chr8 (10-243)||(40422289-40422526)
chr8 (74-243)||(22763681-22763851)
chr8 (17-230)||(15716017-15716235)
chr8 (17-241)||(23514046-23514275)
chr8 (74-243)||(37342910-37343080)
chr8 (74-243)||(31689981-31690151)
chr8 (74-243)||(43866797-43866967)
chr8 (11-243)||(11478164-11478401)
chr8 (11-243)||(20096039-20096276)
chr8 (17-241)||(40525532-40525761)
chr8 (11-239)||(547567-547800)
chr8 (97-242)||(29190289-29190434)
chr8 (74-243)||(36623481-36623651)
chr8 (101-243)||(35163630-35163773)
chr8 (11-243)||(13566429-13566666)
chr8 (74-243)||(25287878-25288048)
chr8 (74-234)||(41251209-41251370)
chr8 (17-181)||(9632353-9632521)
chr8 (118-240)||(41182026-41182149)
chr8 (74-231)||(7533-7691)
chr8 (98-243)||(23424622-23424768)
chr8 (74-243)||(24529764-24529932)
chr8 (74-243)||(26739803-26739972)
chr8 (98-243)||(41801944-41802090)
chr8 (74-239)||(27856828-27856994)
chr8 (69-179)||(37713777-37713887)
chr8 (80-176)||(40933267-40933363)
chr8 (112-179)||(41251123-41251190)
chr8 (111-179)||(41182212-41182280)
chr8 (120-179)||(40422160-40422219)
chr8 (112-179)||(40422477-40422544)
chr8 (112-178)||(26740035-26740101)
chr8 (122-176)||(40933180-40933234)
chr8 (112-181)||(9632326-9632395)
chr8 (111-180)||(23424828-23424897)
chr8 (111-176)||(27857058-27857123)
chr8 (112-180)||(24529973-24530041)
chr8 (113-176)||(7396-7459)
chr8 (112-179)||(7710-7777)
chr8 (112-179)||(9632620-9632687)
chr8 (112-179)||(11478145-11478212)
chr8 (6-53)||(15716083-15716130)
chr8 (112-179)||(36623352-36623419)
chr8 (112-179)||(40525507-40525574)
chr8 (112-178)||(22763596-22763662)
chr8 (113-179)||(36623671-36623737)
chr8 (113-179)||(43866711-43866777)
chr8 (112-181)||(547752-547821)
chr8 (112-181)||(38600267-38600336)
chr8 (112-177)||(41801818-41801883)
chr8 (112-176)||(20096023-20096087)
chr8 (112-168)||(20096341-20096397)
chr8 (113-181)||(23424510-23424578)
chr8 (113-177)||(37343100-37343164)
chr8 (111-179)||(40525823-40525891)
chr8 (112-179)||(25287792-25287859)
chr8 (112-179)||(29190160-29190227)
chr8 (10-53)||(29190370-29190413)
chr8 (130-179)||(23514021-23514070)
chr8 (112-181)||(27436561-27436630)
chr8 (112-181)||(43867028-43867097)
chr8 (116-176)||(13566413-13566473)
chr8 (112-176)||(29190476-29190540)
chr8 (112-168)||(38619809-38619865)
[»] chr6 (55 HSPs)
chr6 (11-243)||(7612567-7612803)
chr6 (60-243)||(31879529-31879713)
chr6 (54-231)||(3586351-3586529)
chr6 (17-243)||(26542641-26542873)
chr6 (74-231)||(23291830-23291988)
chr6 (11-240)||(3299690-3299924)
chr6 (74-243)||(32337650-32337820)
chr6 (18-243)||(1066267-1066497)
chr6 (11-243)||(13480227-13480464)
chr6 (74-243)||(5064463-5064633)
chr6 (74-243)||(22493966-22494136)
chr6 (95-243)||(21880492-21880641)
chr6 (17-243)||(20774114-20774337)
chr6 (74-243)||(26503450-26503605)
chr6 (74-228)||(20561070-20561225)
chr6 (53-186)||(31386864-31386996)
chr6 (74-176)||(19296423-19296525)
chr6 (144-243)||(15819645-15819745)
chr6 (113-179)||(20774399-20774465)
chr6 (95-168)||(737901-737974)
chr6 (111-179)||(20560928-20560996)
chr6 (112-179)||(15819807-15819874)
chr6 (113-180)||(21544517-21544584)
chr6 (112-181)||(738014-738083)
chr6 (112-181)||(20994817-20994886)
chr6 (112-181)||(23292061-23292130)
chr6 (111-179)||(3299559-3299627)
chr6 (112-179)||(13480208-13480275)
chr6 (112-179)||(30234909-30234976)
chr6 (112-181)||(5064652-5064721)
chr6 (112-181)||(8427198-8427267)
chr6 (113-178)||(26542938-26543003)
chr6 (118-179)||(32337890-32337950)
chr6 (119-179)||(3586212-3586271)
chr6 (112-180)||(20995008-20995076)
chr6 (112-180)||(21880363-21880431)
chr6 (112-179)||(5064335-5064402)
chr6 (112-179)||(13480525-13480592)
chr6 (112-179)||(16704626-16704693)
chr6 (112-179)||(26503671-26503738)
chr6 (112-178)||(3299876-3299942)
chr6 (113-179)||(7612548-7612614)
chr6 (112-181)||(21880681-21880750)
chr6 (111-179)||(16706967-16707035)
chr6 (192-243)||(31393386-31393438)
chr6 (112-176)||(32337567-32337631)
chr6 (17-52)||(3586236-3586271)
chr6 (10-53)||(32337694-32337737)
chr6 (11-53)||(3586423-3586465)
chr6 (112-166)||(9607633-9607687)
chr6 (111-181)||(19039105-19039175)
chr6 (11-53)||(21544537-21544579)
chr6 (112-178)||(23291745-23291811)
chr6 (17-53)||(8427225-8427261)
chr6 (112-176)||(31879461-31879524)
[»] chr3 (40 HSPs)
chr3 (17-243)||(28310476-28310707)
chr3 (74-243)||(33458002-33458172)
chr3 (18-242)||(30890233-30890462)
chr3 (11-240)||(30803865-30804100)
chr3 (74-236)||(33989100-33989262)
chr3 (18-242)||(46670385-46670613)
chr3 (74-243)||(10749404-10749574)
chr3 (74-243)||(55036755-55036925)
chr3 (78-241)||(24576380-24576544)
chr3 (95-243)||(11312863-11313012)
chr3 (71-240)||(51279362-51279531)
chr3 (71-243)||(10997957-10998129)
chr3 (11-243)||(21300261-21300498)
chr3 (17-241)||(40256899-40257127)
chr3 (97-243)||(22129115-22129262)
chr3 (17-173)||(21255730-21255890)
chr3 (101-239)||(53037140-53037279)
chr3 (95-243)||(1741515-1741664)
chr3 (60-165)||(38642867-38642972)
chr3 (101-231)||(35432464-35432595)
chr3 (75-243)||(30654612-30654777)
chr3 (112-176)||(21300450-21300514)
chr3 (111-179)||(51279231-51279299)
chr3 (112-179)||(1741387-1741454)
chr3 (112-178)||(10998190-10998256)
chr3 (128-231)||(38642770-38642873)
chr3 (112-179)||(10749318-10749385)
chr3 (112-174)||(40256879-40256941)
chr3 (118-179)||(30654802-30654863)
chr3 (113-177)||(30803848-30803912)
chr3 (112-180)||(53037026-53037094)
chr3 (11-53)||(33458046-33458088)
chr3 (118-179)||(11312735-11312796)
chr3 (112-176)||(30890524-30890588)
chr3 (112-176)||(55036672-55036736)
chr3 (112-176)||(55036986-55037050)
chr3 (112-179)||(22129006-22129073)
chr3 (129-179)||(38642990-38643040)
chr3 (128-177)||(53037360-53037409)
chr3 (111-179)||(40257189-40257257)
[»] scaffold0233 (2 HSPs)
scaffold0233 (18-241)||(8459-8687)
scaffold0233 (112-177)||(8435-8500)
[»] scaffold0321 (2 HSPs)
scaffold0321 (74-243)||(10748-10918)
scaffold0321 (112-179)||(10979-11046)
[»] scaffold0201 (2 HSPs)
scaffold0201 (74-243)||(14021-14191)
scaffold0201 (128-179)||(13893-13944)
[»] scaffold1493 (2 HSPs)
scaffold1493 (74-243)||(721-891)
scaffold1493 (112-179)||(910-977)
[»] scaffold0022 (2 HSPs)
scaffold0022 (74-239)||(120285-120451)
scaffold0022 (112-179)||(120517-120582)
[»] scaffold0202 (2 HSPs)
scaffold0202 (11-243)||(14254-14491)
scaffold0202 (128-182)||(14232-14286)
[»] scaffold0206 (2 HSPs)
scaffold0206 (11-179)||(10344-10516)
scaffold0206 (112-179)||(10325-10392)


Alignment Details
Target: chr2 (Bit Score: 199; Significance: 1e-108; HSPs: 53)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 1 - 280
Target Start/End: Complemental strand, 43682228 - 43681949
Alignment:
Q  1 ggtcattttatccctccaaatataggtcatttgaattttcgcctctaaagttatcctttcattttgctattgtaaatattaatcatttaaaaaatggtcc 100  Q
    ||||||||  ||||||||||||||||||||||||||||||  |  |||| |||||||| ||||||||||||||||||||||||||||| |||||||||||    
T  43682228 ggtcatttcgtccctccaaatataggtcatttgaattttcatccttaaaattatccttccattttgctattgtaaatattaatcatttgaaaaatggtcc 43682129  T
Q  101 taattacatctgattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagccaaccacctcactcaatcatca 200  Q
    |||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||    
T  43682128 taattacatctgattagtaacttcagggacgaaaattcaaataacctaaatttgcagagacgaaagacatatttaagccaaccacctcacccaatcatca 43682029  T
Q  201 cttgccacatggcaccacgtcgctaatgacaacccacctcagcnnnnnnnctctaattatgaccaaaaagtcaaatgatt 280  Q
    |||||||||||||| |||||||||||||||||||||||||| |       ||||||||||||||||||||||||||||||    
T  43682028 cttgccacatggcatcacgtcgctaatgacaacccacctcaacaaaaaaactctaattatgaccaaaaagtcaaatgatt 43681949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 17 - 231
Target Start/End: Complemental strand, 5608953 - 5608734
Alignment:
Q  17 caaatataggtcatttgaattttcgcctctaaagtta----tcctttcattttgctattgtaaatattaatcatttaaaaaatggtcctaattacatctg 112  Q
    ||||||||| ||||||||||||||  |||||||||||    |||||||||||||| |||| ||||||||||||||| |||||||||||||||||||||||    
T  5608953 caaatatagatcatttgaattttcctctctaaagttactaatcctttcattttgccattgcaaatattaatcatttgaaaaatggtcctaattacatctg 5608854  T
Q  113 attaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagccaaccacctcactcaatcatcacttgccacat-g 211  Q
    |||| |||||||| | ||||||||| |||| || || |||||||| |||||||||| ||||||||||||||||||| | ||||||||||||||||||| |    
T  5608853 attagtaacttcataaacgaaaattaaaatgacttatatttgcagggacgaaagacctatttaagccaaccacctcgcccaatcatcacttgccacatgg 5608754  T
Q  212 gcaccacgtcgctaatgaca 231  Q
    ||||||| ||||||||||||    
T  5608753 gcaccacatcgctaatgaca 5608734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 17 - 243
Target Start/End: Complemental strand, 9694101 - 9693870
Alignment:
Q  17 caaatataggtcatttgaattttcgcctctaaagtta----tcctttcattttgctattgtaaatattaatcatttaaaaaatggtcctaattacatctg 112  Q
    ||||||||||||||||||||||||| | || ||||||    ||||| |||||||  |||| ||||||||||||||| |||||||||||||||||||||||    
T  9694101 caaatataggtcatttgaattttcgtccctgaagttactaatccttccattttgtcattgcaaatattaatcatttgaaaaatggtcctaattacatctg 9694002  T
Q  113 attaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagccaaccacctcactcaatcatcacttgccacat-g 211  Q
    |||| |||||| || ||||||||||||||| ||||| |||||||| |||||||  | |||||||| ||| || ||| | ||||||||||||||||||| |    
T  9694001 attagtaactttagggacgaaaattcaaatgacctatatttgcagggacgaaaatcctatttaagtcaatcatctcgcccaatcatcacttgccacatag 9693902  T
Q  212 gcaccacgtcgctaatgacaacccacctcagc 243  Q
    |||||||||||||||||||| |||||||||||    
T  9693901 gcaccacgtcgctaatgacagcccacctcagc 9693870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 11 - 243
Target Start/End: Original strand, 32519174 - 32519411
Alignment:
Q  11 tccctccaaatataggtcatttgaattttcgcctctaaagtta----tcctttcattttgctattgtaaatattaatcatttaaaaaatggtcctaatta 106  Q
    ||||| ||||||||||||||||||||||||| | || || |||    ||||| || | ||||  || ||||||||||||||| |    |||| |||||||    
T  32519174 tccctgcaaatataggtcatttgaattttcgtccctgaaattactaatccttccaatatgctcctgcaaatattaatcatttgacttttggttctaatta 32519273  T
Q  107 catctgattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagccaaccacctcactcaatcatcacttgcc 206  Q
    |||||||||| ||||||||| ||||||||||||||| ||||| |||||||| || ||||||| ||||||||| |||||||||||||||||||||||||||    
T  32519274 catctgattagtaacttcagggacgaaaattcaaatgacctatatttgcagggatgaaagacctatttaagcaaaccacctcactcaatcatcacttgcc 32519373  T
Q  207 acat-ggcaccacgtcgctaatgacaacccacctcagc 243  Q
    |||| ||||||||||||||||||||| |||||||||||    
T  32519374 acatgggcaccacgtcgctaatgacagcccacctcagc 32519411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 17 - 243
Target Start/End: Original strand, 28599452 - 28599683
Alignment:
Q  17 caaatataggtcatttgaattttcgcctctaaagtta----tcctttcattttgctattgtaaatattaatcatttaaaaaatggtcctaattacatctg 112  Q
    ||||||||| ||||||||||||||| |  | ||||||    ||||| |||||||| |||| ||||||||||||||| |||||||||||||||||||| |     
T  28599452 caaatatagatcatttgaattttcgtccatgaagttactaatccttccattttgccattgcaaatattaatcatttgaaaaatggtcctaattacatata 28599551  T
Q  113 attaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagccaaccacctcactcaatcatcacttgccacat-g 211  Q
    |||| ||| ||||| |||||||||||||||   ||| |||||||| | |||||||| ||||||||||||||||||| ||||||||||||||||||||| |    
T  28599552 attagtaatttcagggacgaaaattcaaatggtctatatttgcaggggcgaaagacctatttaagccaaccacctcgctcaatcatcacttgccacatgg 28599651  T
Q  212 gcaccacgtcgctaatgacaacccacctcagc 243  Q
    ||||||||||||| |||||| |||| ||||||    
T  28599652 gcaccacgtcgctcatgacagcccatctcagc 28599683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 53 - 239
Target Start/End: Original strand, 4375614 - 4375801
Alignment:
Q  53 atcctttcattttgctattgtaaatattaatcatttaaaaaatggtcctaattacatctgattaataacttcagagacgaaaattcaaataacctaaatt 152  Q
    |||||| |||||||| || | ||||||||||||||| ||||||||| ||||||||||||||||| ||||||||| |||||||||||||||  | || |||    
T  4375614 atccttccattttgccatagcaaatattaatcatttgaaaaatggttctaattacatctgattagtaacttcagggacgaaaattcaaattgcatatatt 4375713  T
Q  153 tgcagagacgaaagacgtatttaagccaaccacctcactcaatcatcacttgccacat-ggcaccacgtcgctaatgacaacccacct 239  Q
    |||||||||||||||| ||||||| | ||||||||| |||||||||||||||||| || |||||||||||| ||||| ||||||||||    
T  4375714 tgcagagacgaaagacatatttaaactaaccacctcgctcaatcatcacttgccatatgggcaccacgtcgttaatgccaacccacct 4375801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 74 - 231
Target Start/End: Complemental strand, 41846690 - 41846532
Alignment:
Q  74 aaatattaatcatttaaaaaatggtcctaattacatctgattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatt 173  Q
    ||||||||||||||| ||||||| | ||||||||||||||||| ||||||||| ||||||||||||||| ||||| |||||||| |||||||||| ||||    
T  41846690 aaatattaatcatttgaaaaatgattctaattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcagggacgaaagacttatt 41846591  T
Q  174 taagccaaccacctcactcaatcatcacttgccacat-ggcaccacgtcgctaatgaca 231  Q
    ||||||||||||||| |  |||||||||||||||||| |||||||||||||||||||||    
T  41846590 taagccaaccacctcgccaaatcatcacttgccacatgggcaccacgtcgctaatgaca 41846532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 6 - 243
Target Start/End: Original strand, 37984741 - 37984983
Alignment:
Q  6 ttttatccctccaaatataggtcatttgaattttcgcctctaaagtta----tcctttcattttgctattgtaaatattaatcatttaaaaaatggtcct 101  Q
    |||| ||||| ||||||||  ||||||||||||||| || ||||||||    | ||| |||||||| ||||||||||||||| |||| ||||||||||||    
T  37984741 ttttttccctgcaaatatatatcatttgaattttcgtctataaagttactaattcttccattttgccattgtaaatattaattatttgaaaaatggtcct 37984840  T
Q  102 aattacatctgattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagccaaccacctcactcaatcatcac 201  Q
    ||||||||||||||| ||| ||||   | |||||||||||| || || |||||||| |||||||    ||||||||||||||| ||||||||||||||||    
T  37984841 aattacatctgattagtaatttcatgaaagaaaattcaaatgacatatatttgcagggacgaaaattttatttaagccaaccatctcactcaatcatcac 37984940  T
Q  202 ttgccacat-ggcaccacgtcgctaatgacaacccacctcagc 243  Q
    ||||||||| || ||||||| |||||||||| |||||||||||    
T  37984941 ttgccacatgggtaccacgttgctaatgacagcccacctcagc 37984983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 74 - 243
Target Start/End: Complemental strand, 22309729 - 22309559
Alignment:
Q  74 aaatattaatcatttaaaaaatggtcctaattacatctgattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatt 173  Q
    ||||||||||||||| ||||||||||||||||||||||||||| |||||| || ||||||||||||||| ||||| |||||||| ||| |||  | ||||    
T  22309729 aaatattaatcatttgaaaaatggtcctaattacatctgattagtaactttagggacgaaaattcaaatgacctatatttgcagggacaaaatgcctatt 22309630  T
Q  174 taagccaaccacctcactcaatcatcacttgccacat-ggcaccacgtcgctaatgacaacccacctcagc 243  Q
    ||||||||||||||| | ||||||||||||||||||| ||||| | ||||||||||||| |||||||||||    
T  22309629 taagccaaccacctcgcccaatcatcacttgccacatgggcacgatgtcgctaatgacagcccacctcagc 22309559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 11 - 243
Target Start/End: Complemental strand, 16367328 - 16367091
Alignment:
Q  11 tccctccaaatataggtcatttgaattttcgcctctaaagtta----tcctttcattttgctattgtaaatattaatcatttaaaaaatggtcctaatta 106  Q
    ||||| |||||||||| |||||||||||||| | || ||||||    ||||| || | |||   || ||||||||||||||| |    ||||||||||||    
T  16367328 tccctgcaaatataggccatttgaattttcgtccctgaagttactaatccttccaatatgcccctgcaaatattaatcatttgacttttggtcctaatta 16367229  T
Q  107 catctgattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagccaaccacctcactcaatcatcacttgcc 206  Q
    ||| |||||| ||||||||| ||||||||||||||| ||||| ||||| || || ||||||| ||||||||| ||||||||| |||||||||||||||||    
T  16367228 catatgattagtaacttcagggacgaaaattcaaatgacctatatttgtagggatgaaagacctatttaagcaaaccacctcgctcaatcatcacttgcc 16367129  T
Q  207 acatg-gcaccacgtcgctaatgacaacccacctcagc 243  Q
    ||||| |||||||||||||||||||| |||||||||||    
T  16367128 acatgtgcaccacgtcgctaatgacagcccacctcagc 16367091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 11 - 243
Target Start/End: Original strand, 17284762 - 17284991
Alignment:
Q  11 tccctccaaatataggtcatttgaattttcgcctctaaagttatcctttcattttgctattgtaaatattaatcatttaaaaaatggtcctaattacatc 110  Q
    ||||| |||||||||||||||||||||||||  ||| ||||||     | ||  | | |||| ||||||||||||||| |||||||||||||| |||||     
T  17284762 tccctgcaaatataggtcatttgaattttcgtatctgaagttac----taatccttccattgaaaatattaatcatttgaaaaatggtcctaactacata 17284857  T
Q  111 tgattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagccaaccacctcactcaatcatcacttgccacat 210  Q
    |||||| |||||||||  |  ||||||||||| ||||| |||||||| |||||||| | ||||||||||||||||||| |  ||||||||||||||||||    
T  17284858 tgattagtaacttcaggaatcaaaattcaaattacctatatttgcagggacgaaagccctatttaagccaaccacctcgccaaatcatcacttgccacat 17284957  T
Q  211 g-gcaccacgtcgctaatgacaacccacctcagc 243  Q
    | |||||||||||||||||||| |||||||||||    
T  17284958 gtgcaccacgtcgctaatgacagcccacctcagc 17284991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 74 - 243
Target Start/End: Original strand, 17366712 - 17366878
Alignment:
Q  74 aaatattaatcatttaaaaaatggtcctaattacatctgattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatt 173  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||   ||| |||||||  |||||||||| ||||    
T  17366712 aaatattaatcatttaaaaaatggtcctaattacatctgattagtaacttcagggacgaaaattcaaatggactatatttgcaaggacgaaagacatatt 17366811  T
Q  174 taagccaaccacctcactcaatcatcacttgccacatgg-caccacgtcgctaatgacaacccacctcagc 243  Q
    |||||||||    || | ||||||||||||| || |||| |||||||||||||||||||||||||||||||    
T  17366812 taagccaac----tcgcccaatcatcacttgtcatatgggcaccacgtcgctaatgacaacccacctcagc 17366878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 11 - 243
Target Start/End: Original strand, 20911149 - 20911386
Alignment:
Q  11 tccctccaaatataggtcatttgaattttcgcctctaaagtta----tcctttcattttgctattgtaaatattaatcatttaaaaaatggtcctaatta 106  Q
    ||||| ||||||||||||||||||||||||| | || ||||||    ||||| || | |||   || ||||||||||||||| |    ||||| ||||||    
T  20911149 tccctgcaaatataggtcatttgaattttcgtccctgaagttactaatccttccaatctgcccctgcaaatattaatcatttgacttttggtcataatta 20911248  T
Q  107 catctgattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagccaaccacctcactcaatcatcacttgcc 206  Q
    |||||||||| ||||||||| ||||||||||||||| ||||| |||||||| ||  |||| | ||||||||| ||||||||| | |||||||||||||||    
T  20911249 catctgattagtaacttcagggacgaaaattcaaatgacctatatttgcagggataaaagtcctatttaagcaaaccacctcgcccaatcatcacttgcc 20911348  T
Q  207 acat-ggcaccacgtcgctaatgacaacccacctcagc 243  Q
    |||| ||||||||||||||||||||| |||| ||||||    
T  20911349 acatgggcaccacgtcgctaatgacagcccatctcagc 20911386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 74 - 243
Target Start/End: Complemental strand, 9959123 - 9958953
Alignment:
Q  74 aaatattaatcatttaaaaaatggtcctaattacatctgattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatt 173  Q
    ||||||||||||||| |||||||||| |||||||||||||||| |||||||| |||  ||||||||||| ||||| |||||||| ||||||| ||  |||    
T  9959123 aaatattaatcatttgaaaaatggtcataattacatctgattagtaacttcaaagataaaaattcaaatgacctatatttgcagggacgaaaaaccaatt 9959024  T
Q  174 taagccaaccacctcactcaatcatcacttgccacat-ggcaccacgtcgctaatgacaacccacctcagc 243  Q
    ||||||||| || |||  || ||||||||||| |||| ||||||||||||||||||||| |||||||||||    
T  9959023 taagccaacaacttcatccagtcatcacttgcgacatgggcaccacgtcgctaatgacagcccacctcagc 9958953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 98 - 243
Target Start/End: Original strand, 17580438 - 17580584
Alignment:
Q  98 tcctaattacatctgattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagccaaccacctcactcaatca 197  Q
    ||||||||||||||||||| ||||||||| ||||||||||||||| | ||| |||||||  || ||||||| ||||||| | ||||||||| | ||||||    
T  17580438 tcctaattacatctgattagtaacttcagggacgaaaattcaaatgatctatatttgcaaggatgaaagacctatttaaacaaaccacctcgcccaatca 17580537  T
Q  198 tcacttgccacat-ggcaccacgtcgctaatgacaacccacctcagc 243  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||    
T  17580538 tcacttgccacatgggcaccacgtcgctaatgacaacccacctcagc 17580584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 11 - 228
Target Start/End: Original strand, 1149956 - 1150178
Alignment:
Q  11 tccctccaaatataggtcatttgaattttcgcctctaaagtta----tcctttcattttgctattgtaaatattaatcatttaaaaaatggtcctaatta 106  Q
    ||||| ||||||||||||||||||||||||| | || ||||||    ||||| || |  ||   || ||||||||||||||| |    ||||||||||||    
T  1149956 tccctgcaaatataggtcatttgaattttcgtccctgaagttactaatccttccaatcggcccctgcaaatattaatcatttgacttttggtcctaatta 1150055  T
Q  107 catctgattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagccaaccacctcactcaatcatcacttgcc 206  Q
    ||| |||||| ||||||||| ||||||||||||||| ||||| ||||| || || ||||||| ||||||||| |||||| || | |||||||||||||||    
T  1150056 catttgattagtaacttcagggacgaaaattcaaatgacctatatttgtagggatgaaagacctatttaagcaaaccacgtcgcccaatcatcacttgcc 1150155  T
Q  207 acat-ggcaccacgtcgctaatg 228  Q
    |||| ||||||||||||||||||    
T  1150156 acatgggcaccacgtcgctaatg 1150178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 95 - 243
Target Start/End: Original strand, 8089559 - 8089708
Alignment:
Q  95 tggtcctaattacatctgattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagccaaccacctcactcaa 194  Q
    |||||||||||||||||||||| ||||||||  ||||||||||||||  ||||| |||||||| || ||||||| ||||||||| |||||||||   |||    
T  8089559 tggtcctaattacatctgattagtaacttcaaggacgaaaattcaaacgacctatatttgcagggatgaaagacctatttaagcaaaccacctcgtccaa 8089658  T
Q  195 tcatcacttgccacatgg-caccacgtcgctaatgacaacccacctcagc 243  Q
    | |||||||||||||||| |||||||||||||||||||  ||||||||||    
T  8089659 ttatcacttgccacatggacaccacgtcgctaatgacagtccacctcagc 8089708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 74 - 179
Target Start/End: Complemental strand, 45663806 - 45663701
Alignment:
Q  74 aaatattaatcatttaaaaaatggtcctaattacatctgattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatt 173  Q
    ||||||||||||||| |    |||||||||||||||||||||| ||||||||   |||||||||||||| ||||| |||||||| |||||||||| ||||    
T  45663806 aaatattaatcatttgacttttggtcctaattacatctgattagtaacttcaagaacgaaaattcaaatgacctatatttgcagggacgaaagacatatt 45663707  T
Q  174 taagcc 179  Q
    ||||||    
T  45663706 taagcc 45663701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 60 - 135
Target Start/End: Complemental strand, 18477188 - 18477113
Alignment:
Q  60 cattttgctattgtaaatattaatcatttaaaaaatggtcctaattacatctgattaataacttcagagacgaaaa 135  Q
    |||||||| |||| | ||||||||||||| ||||||||||||||||||||||||||| ||||||||| ||||||||    
T  18477188 cattttgccattgaagatattaatcatttcaaaaatggtcctaattacatctgattagtaacttcagggacgaaaa 18477113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 74 - 180
Target Start/End: Complemental strand, 22731830 - 22731724
Alignment:
Q  74 aaatattaatcatttaaaaaatggtcctaattacatctgattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatt 173  Q
    ||||||||||||||| |    ||||||| |||||||||||||| |||||| || ||||||||||||||| ||||| |||||||| || ||||||| ||||    
T  22731830 aaatattaatcatttgacttttggtccttattacatctgattagtaactttagggacgaaaattcaaatgacctatatttgcagggatgaaagacctatt 22731731  T
Q  174 taagcca 180  Q
    |||||||    
T  22731730 taagcca 22731724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 112 - 179
Target Start/End: Complemental strand, 20911197 - 20911130
Alignment:
Q  112 gattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagcc 179  Q
    ||||| ||||||||| ||||||||||||||| ||||| |||||||| |||||||||| ||||||||||    
T  20911197 gattagtaacttcagggacgaaaattcaaatgacctatatttgcagggacgaaagacctatttaagcc 20911130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 112 - 180
Target Start/End: Complemental strand, 10446899 - 10446831
Alignment:
Q  112 gattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagcca 180  Q
    ||||| ||||||||| |||||||||||||||  |||| |||||||| |||||||||| |||||||||||    
T  10446899 gattagtaacttcagggacgaaaattcaaatggcctatatttgcagggacgaaagacatatttaagcca 10446831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 112 - 180
Target Start/End: Complemental strand, 17580395 - 17580327
Alignment:
Q  112 gattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagcca 180  Q
    ||||||||||||| | ||||||||||||||||  ||| |||| |||||||||||||| |||||||||||    
T  17580395 gattaataacttcggggacgaaaattcaaatagtctatatttacagagacgaaagacctatttaagcca 17580327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 112 - 179
Target Start/End: Complemental strand, 1150004 - 1149937
Alignment:
Q  112 gattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagcc 179  Q
    ||||| ||||||||| ||||||||||||||| ||||| |||||||| ||||||| || ||||||||||    
T  1150004 gattagtaacttcagggacgaaaattcaaatgacctatatttgcagggacgaaatacctatttaagcc 1149937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 112 - 179
Target Start/End: Original strand, 9694059 - 9694126
Alignment:
Q  112 gattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagcc 179  Q
    ||||| ||||||||| ||||||||||||||| ||||| |||||||  |||||||||| ||||||||||    
T  9694059 gattagtaacttcagggacgaaaattcaaatgacctatatttgcatggacgaaagacctatttaagcc 9694126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 112 - 179
Target Start/End: Complemental strand, 16367030 - 16366963
Alignment:
Q  112 gattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagcc 179  Q
    ||||| ||||||||| ||||||||||||||| ||||| |||| ||| |||||||||| ||||||||||    
T  16367030 gattagtaacttcagggacgaaaattcaaatgacctatatttacagggacgaaagacatatttaagcc 16366963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 112 - 179
Target Start/End: Complemental strand, 17284810 - 17284743
Alignment:
Q  112 gattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagcc 179  Q
    ||||| |||||||||| |||||||||||||| ||||| |||||||| ||||||| || ||||||||||    
T  17284810 gattagtaacttcagatacgaaaattcaaatgacctatatttgcagggacgaaaaacctatttaagcc 17284743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 150 - 240
Target Start/End: Complemental strand, 19607140 - 19607049
Alignment:
Q  150 atttgcagagacgaaagacgtatttaagccaaccacctcactcaatcatcacttgccacatgg-caccacgtcgctaatgacaacccacctc 240  Q
    |||||||| ||  |||||| ||||||||| || ||||||   |||||||||||||||| |||| ||||||||||||||||||| ||||||||    
T  19607140 atttgcagggataaaagacatatttaagcaaatcacctcgtccaatcatcacttgccatatgggcaccacgtcgctaatgacagcccacctc 19607049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 112 - 179
Target Start/End: Complemental strand, 32519222 - 32519155
Alignment:
Q  112 gattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagcc 179  Q
    ||||| ||| ||||| ||||||||||||||| ||||| |||||||| |||||||||| ||||||||||    
T  32519222 gattagtaatttcagggacgaaaattcaaatgacctatatttgcagggacgaaagacatatttaagcc 32519155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 113 - 179
Target Start/End: Original strand, 22309749 - 22309815
Alignment:
Q  113 attaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagcc 179  Q
    |||| ||||||||| ||||||||||||||| ||||| |||||||| || ||||||| ||||||||||    
T  22309749 attagtaacttcagggacgaaaattcaaatgacctatatttgcagggaagaaagacctatttaagcc 22309815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 159 - 243
Target Start/End: Complemental strand, 18477120 - 18477035
Alignment:
Q  159 gacgaaagacgtatttaagccaaccacctcactcaatcatcacttgccacat-ggcaccacgtcgctaatgacaacccacctcagc 243  Q
    ||||||| || ||||||||||||||| ||  | |||||||||||| |||||| ||||||| |||| |||||||| |||||||||||    
T  18477120 gacgaaaaacttatttaagccaaccagctagcccaatcatcacttaccacatgggcaccatgtcgttaatgacagcccacctcagc 18477035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 111 - 180
Target Start/End: Original strand, 20911445 - 20911514
Alignment:
Q  111 tgattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagcca 180  Q
    |||||| ||||||||| ||| ||||||||||| ||||| |||| ||| |||||||||| |||||||||||    
T  20911445 tgattagtaacttcagggacaaaaattcaaatgacctatatttacagggacgaaagacatatttaagcca 20911514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 112 - 176
Target Start/End: Complemental strand, 8089519 - 8089455
Alignment:
Q  112 gattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaa 176  Q
    ||||| |||||||| |||||||||||||||| || || |||||||||||||||| || |||||||    
T  8089519 gattagtaacttcaaagacgaaaattcaaatgacatatatttgcagagacgaaaaacctatttaa 8089455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 112 - 180
Target Start/End: Original strand, 17285052 - 17285120
Alignment:
Q  112 gattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagcca 180  Q
    ||||| ||||||||  ||||||||||||||| |||||||||| ||| |||||||||  |||||||||||    
T  17285052 gattagtaacttcattgacgaaaattcaaatgacctaaattttcagggacgaaagatctatttaagcca 17285120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 112 - 179
Target Start/End: Original strand, 1150254 - 1150321
Alignment:
Q  112 gattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagcc 179  Q
    ||||| ||| ||||| ||||||||||||||| ||||| ||||||||  ||||||||| ||||||||||    
T  1150254 gattagtaatttcagggacgaaaattcaaatgacctatatttgcaggcacgaaagacatatttaagcc 1150321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 112 - 179
Target Start/End: Complemental strand, 22309498 - 22309431
Alignment:
Q  112 gattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagcc 179  Q
    ||||| ||||||||  ||| ||||||||||| ||||| |||||||| |||||||||| ||||||||||    
T  22309498 gattagtaacttcattgactaaaattcaaatgacctatatttgcagggacgaaagacctatttaagcc 22309431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 112 - 179
Target Start/End: Original strand, 32519472 - 32519539
Alignment:
Q  112 gattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagcc 179  Q
    ||||| |||||||||  |||||||||||||| || || |||||||| |||||||||| ||||||||||    
T  32519472 gattagtaacttcaggaacgaaaattcaaatgacttatatttgcagggacgaaagacatatttaagcc 32519539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 112 - 179
Target Start/End: Complemental strand, 41846459 - 41846392
Alignment:
Q  112 gattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagcc 179  Q
    ||||| ||||||||| ||||||||||||||| ||||| ||||| || |||||||||  ||||||||||    
T  41846459 gattactaacttcagggacgaaaattcaaatgacctatatttgtagggacgaaagatctatttaagcc 41846392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 118 - 180
Target Start/End: Original strand, 28599750 - 28599812
Alignment:
Q  118 taacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagcca 180  Q
    ||||||||||||||||||||||||| || || |||| ||| || ||||||| |||||||||||    
T  28599750 taacttcagagacgaaaattcaaatgacttatatttacagggatgaaagacctatttaagcca 28599812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 53
Target Start/End: Original strand, 22309636 - 22309685
Alignment:
Q  4 cattttatccctccaaatataggtcatttgaattttcgcctctaaagtta 53  Q
    |||||| ||||| ||||||||||||||||||||||||| | |||||||||    
T  22309636 cattttgtccctgcaaatataggtcatttgaattttcgtccctaaagtta 22309685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 118 - 179
Target Start/End: Original strand, 22731855 - 22731916
Alignment:
Q  118 taacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagcc 179  Q
    ||||||||  |||||||||||||||  |||| |||||||| |||||||||| ||||||||||    
T  22731855 taacttcacggacgaaaattcaaatggcctatatttgcagggacgaaagacatatttaagcc 22731916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 112 - 168
Target Start/End: Original strand, 16367280 - 16367336
Alignment:
Q  112 gattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagac 168  Q
    ||||| ||||||||| |||||||||||||||  |||| |||||||| ||||||||||    
T  16367280 gattagtaacttcagggacgaaaattcaaatggcctatatttgcagggacgaaagac 16367336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 112 - 176
Target Start/End: Complemental strand, 19606984 - 19606920
Alignment:
Q  112 gattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaa 176  Q
    ||||| ||||||||| ||||||||||||||| || || |||| ||| |||||||||| |||||||    
T  19606984 gattagtaacttcagggacgaaaattcaaatgacatatatttacagggacgaaagacatatttaa 19606920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 111 - 179
Target Start/End: Complemental strand, 43681924 - 43681856
Alignment:
Q  111 tgattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagcc 179  Q
    |||||| |||||| |  ||||||||||||||| || || |||||||| |||||||||| ||||||||||    
T  43681924 tgattagtaactttatggacgaaaattcaaatgacatatatttgcagggacgaaagacatatttaagcc 43681856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 112 - 180
Target Start/End: Original strand, 45663825 - 45663893
Alignment:
Q  112 gattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagcca 180  Q
    ||||| ||||||||| |||||||||||||||   ||| |||| ||| |||||||||| |||||||||||    
T  45663825 gattagtaacttcagggacgaaaattcaaattgactatatttacagggacgaaagacatatttaagcca 45663893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 6 - 41
Target Start/End: Complemental strand, 20911307 - 20911272
Alignment:
Q  6 ttttatccctccaaatataggtcatttgaattttcg 41  Q
    |||||||||| |||||||||||||||||||||||||    
T  20911307 ttttatccctgcaaatataggtcatttgaattttcg 20911272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 10 - 53
Target Start/End: Original strand, 22731743 - 22731786
Alignment:
Q  10 atccctccaaatataggtcatttgaattttcgcctctaaagtta 53  Q
    |||||| ||||||||||||||||||||||||| | |||||||||    
T  22731743 atccctgcaaatataggtcatttgaattttcgtccctaaagtta 22731786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 53
Target Start/End: Original strand, 9693954 - 9693996
Alignment:
Q  11 tccctccaaatataggtcatttgaattttcgcctctaaagtta 53  Q
    ||||| ||||||||||||||||||||||||| | |||||||||    
T  9693954 tccctgcaaatataggtcatttgaattttcgtccctaaagtta 9693996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 112 - 176
Target Start/End: Original strand, 9959142 - 9959206
Alignment:
Q  112 gattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaa 176  Q
    ||||| ||||||||  ||| ||||||||||| ||| | |||||||| |||||||||| |||||||    
T  9959142 gattagtaacttcatggaccaaaattcaaatgaccaatatttgcagggacgaaagacttatttaa 9959206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 112 - 179
Target Start/End: Original strand, 17580641 - 17580709
Alignment:
Q  112 gattaataacttcagagacgaaaa-ttcaaataacctaaatttgcagagacgaaagacgtatttaagcc 179  Q
    ||||| |||||| || |||||||| ||||||| ||||| ||||| || |||||||||| ||||||||||    
T  17580641 gattagtaactttagggacgaaaaattcaaatgacctatatttgtagggacgaaagacatatttaagcc 17580709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 112 - 176
Target Start/End: Complemental strand, 18476974 - 18476910
Alignment:
Q  112 gattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaa 176  Q
    ||||| ||||||||| ||| ||||||||||| ||||| | |||||| |||||||| | |||||||    
T  18476974 gattagtaacttcagggacaaaaattcaaatgacctatagttgcagggacgaaaggcctatttaa 18476910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 112 - 176
Target Start/End: Complemental strand, 28599494 - 28599430
Alignment:
Q  112 gattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaa 176  Q
    ||||| ||||||||  ||||||||||||||| | ||| |||||||  |||||||||| |||||||    
T  28599494 gattagtaacttcatggacgaaaattcaaatgatctatatttgcaaggacgaaagacctatttaa 28599430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 11 - 88
Target Start/End: Original strand, 43681875 - 43681956
Alignment:
Q  11 tccctccaaatataggtcatttgaattttcgcctctaaagtt----atcctttcattttgctattgtaaatattaatcattt 88  Q
    ||||| |||||||| |||||||||||||||| |  |||||||    ||| || |||||||| |||| |||||||||||||||    
T  43681875 tccctgcaaatatatgtcatttgaattttcgtccataaagttactaatcattccattttgccattgcaaatattaatcattt 43681956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 133; Significance: 3e-69; HSPs: 54)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 11 - 243
Target Start/End: Complemental strand, 22533755 - 22533518
Alignment:
Q  11 tccctccaaatataggtcatttgaattttcgcctctaaagtta----tcctttcattttgctattgtaaatattaatcatttaaaaaatggtcctaatta 106  Q
    ||||| ||||||||||||||||||||||||| | |  ||||||    |||||  || |||| |||| ||||||||||||||| |||||||||||||||||    
T  22533755 tccctgcaaatataggtcatttgaattttcgtccccgaagttactaatccttcaatgttgccattgcaaatattaatcatttgaaaaatggtcctaatta 22533656  T
Q  107 catctgattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagccaaccacctcactcaatcatcacttgcc 206  Q
    |||||||||| ||||||||| ||||||||||||||| |||||||||||||| |||||||||| ||||||||||||||||||| | |||||||||||||||    
T  22533655 catctgattagtaacttcagggacgaaaattcaaatgacctaaatttgcagggacgaaagacctatttaagccaaccacctcgcccaatcatcacttgcc 22533556  T
Q  207 acat-ggcaccacgtcgctaatgacaacccacctcagc 243  Q
    |||| ||||||| ||||||||||||| |||||||||||    
T  22533555 acatgggcaccatgtcgctaatgacagcccacctcagc 22533518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 74 - 241
Target Start/End: Complemental strand, 27753777 - 27753609
Alignment:
Q  74 aaatattaatcatttaaaaaatggtcctaattacatctgattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatt 173  Q
    ||||||||||||||| |||||| |||||||||||||||||||| |||||| || ||||||||||||||| ||||| |||||||| |||||||||| ||||    
T  27753777 aaatattaatcatttgaaaaatagtcctaattacatctgattagtaactttagggacgaaaattcaaatgacctatatttgcagggacgaaagacatatt 27753678  T
Q  174 taagccaaccacctcactcaatcatcacttgccacat-ggcaccacgtcgctaatgacaacccacctca 241  Q
    ||||||||||||||| | ||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  27753677 taagccaaccacctcgcccaatcatcacttgccacatgggcaccacgtcgctaatgacaacccacctca 27753609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 17 - 243
Target Start/End: Original strand, 34404509 - 34404740
Alignment:
Q  17 caaatataggtcatttgaattttcgcctctaaagtta----tcctttcattttgctattgtaaatattaatcatttaaaaaatggtcctaattacatctg 112  Q
    ||||||||||||||||||||||||| | || ||||||    ||||| ||||| || |||| ||||||||||||||| |||||||||| ||||||||||||    
T  34404509 caaatataggtcatttgaattttcgtcactgaagttactaatccttccatttggc-attgcaaatattaatcatttgaaaaatggtcataattacatctg 34404607  T
Q  113 attaataacttcagagacg-aaaattcaaataacctaaatttgcagagacgaaagacgtatttaagccaaccacctcactcaatcatcacttgccacat- 210  Q
    |||| ||||||||  |||| ||||||||||| ||||| |||||||  |||||||||| ||||||||||||||||||| | |||||||||||||||||||     
T  34404608 attagtaacttcatggacggaaaattcaaatgacctatatttgcaaggacgaaagacttatttaagccaaccacctcgcccaatcatcacttgccacatg 34404707  T
Q  211 ggcaccacgtcgctaatgacaacccacctcagc 243  Q
    ||||||||||| ||||||||| |||||||||||    
T  34404708 ggcaccacgtcactaatgacatcccacctcagc 34404740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 11 - 241
Target Start/End: Original strand, 21260884 - 21261118
Alignment:
Q  11 tccctccaaatataggtcatttgaattttcgcctctaaagtta----tcctttcattttgctattgtaaatattaatcatttaaaaaatggtcctaatta 106  Q
    ||||| ||||||||||||||||||||||||| | || ||||||    ||||| |||||||| |||| ||||||||||||||| ||||||| || ||||||    
T  21260884 tccctgcaaatataggtcatttgaattttcgtccctgaagttactaatccttccattttgccattgcaaatattaatcatttgaaaaatgatcataatta 21260983  T
Q  107 catctgattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagccaaccacctcactcaatcatcacttgcc 206  Q
    ||||||||||||||||||||  |||||||||||||| ||||| |||||||| ||| |||||| |||||||| | |||||||||  ||||||| | |||||    
T  21260984 catctgattaataacttcaggaacgaaaattcaaatgacctatatttgcagggacaaaagacatatttaaggc-accacctcatccaatcattatttgcc 21261082  T
Q  207 acat-ggcaccacgtcgctaatgacaacccacctca 241  Q
    |||| ||||||||||| |||||||||||||||||||    
T  21261083 acatgggcaccacgtcactaatgacaacccacctca 21261118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 18 - 243
Target Start/End: Complemental strand, 41339711 - 41339482
Alignment:
Q  18 aaatataggtcatttgaattttcgcctctaaagtta----tcctttcattttgctattgtaaatattaatcatttaaaaaatggtcctaattacatctga 113  Q
    |||||||||||||||||||||||| |  ||||||||    || || |||||||| || | ||||||||||||||| |||||||||||||||||||| |||    
T  41339711 aaatataggtcatttgaattttcgtccataaagttactaatcattccattttgccatcgcaaatattaatcatttgaaaaatggtcctaattacat-tga 41339613  T
Q  114 ttaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagccaaccacctcactcaatcatcacttgccacatgg- 212  Q
     || ||||||||| ||||||||||||||| | ||| |||||||| |||||||||| |||||||| |||||||||||| |||||||||||||||||||||     
T  41339612 ctagtaacttcagggacgaaaattcaaatgatctatatttgcagggacgaaagacatatttaagtcaaccacctcacccaatcatcacttgccacatgga 41339513  T
Q  213 caccacgtcgctaatgacaacccacctcagc 243  Q
    |||||||||||| |||||| | |||||||||    
T  41339512 caccacgtcgctgatgacagctcacctcagc 41339482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 10 - 243
Target Start/End: Original strand, 25253104 - 25253342
Alignment:
Q  10 atccctccaaatataggtcatttgaattttcgcctctaaagtta----tcctttcattttgctattgtaaatattaatcatttaaaaaatggtcctaatt 105  Q
    |||||| ||||||||| ||||||||||||||| | || ||||||    ||||| || |||||   || ||||||||||||||| |    |||||||||||    
T  25253104 atccctgcaaatatagttcatttgaattttcgtccctgaagttactaatccttccaatttgcccctgcaaatattaatcatttgacttttggtcctaatt 25253203  T
Q  106 acatctgattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagccaaccacctcactcaatcatcacttgc 205  Q
    ||||||||||| ||||||||  ||||||||||||||| ||||| |||||||| || ||||||| ||||||||||||||||||||| ||||||||||||||    
T  25253204 acatctgattagtaacttcaaggacgaaaattcaaatgacctatatttgcagggatgaaagacctatttaagccaaccacctcacccaatcatcacttgc 25253303  T
Q  206 cacat-ggcaccacgtcgctaatgacaacccacctcagc 243  Q
    ||||| || |||||||||||||||||| |||||||||||    
T  25253304 cacatgggtaccacgtcgctaatgacagcccacctcagc 25253342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 11 - 243
Target Start/End: Complemental strand, 33735678 - 33735441
Alignment:
Q  11 tccctccaaatataggtcatttgaattttcgcctctaaagtta----tcctttcattttgctattgtaaatattaatcatttaaaaaatggtcctaatta 106  Q
    ||||| ||||||||||||||||||||||||| | || ||||||    ||||| || | |||   || ||||||||||||||| |    ||||||||||||    
T  33735678 tccctgcaaatataggtcatttgaattttcgtccctgaagttactaatccttccaatctgcccctgcaaatattaatcatttgacttttggtcctaatta 33735579  T
Q  107 catctgattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagccaaccacctcactcaatcatcacttgcc 206  Q
    |||||||||| ||||||||| ||||||||||||||| ||||| |||||||| || ||||||| ||||||||| ||||||||| | |||||||||||||||    
T  33735578 catctgattagtaacttcagggacgaaaattcaaatgacctatatttgcagggatgaaagacctatttaagcaaaccacctcgcccaatcatcacttgcc 33735479  T
Q  207 acatgg-caccacgtcgctaatgacaacccacctcagc 243  Q
    |||||| ||||||||||||||||||| |||||||||||    
T  33735478 acatggacaccacgtcgctaatgacatcccacctcagc 33735441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 10 - 243
Target Start/End: Original strand, 25316894 - 25317133
Alignment:
Q  10 atccctccaaatataggtcatttgaattttcgcctctaaagtta----tcctttcattttgctattgtaaatattaatcatttaaaaaatggtcctaatt 105  Q
    |||||| ||||||||| ||||||||||||||| | || ||||||    ||||| || |||||   || ||||||||||||||| |    |||||||||||    
T  25316894 atccctgcaaatatagttcatttgaattttcgtccctgaagttactaatccttccaatttgcccctgcaaatattaatcatttgacttttggtcctaatt 25316993  T
Q  106 acatctgattaataacttcagagacgaaaattcaaataacctaaatttgcagaga-cgaaagacgtatttaagccaaccacctcactcaatcatcacttg 204  Q
    ||||||||||| ||||||||  ||||||||||||||| ||||| |||||||| ||  ||||||| ||||||||||||||||||||| |||||||||||||    
T  25316994 acatctgattagtaacttcaaggacgaaaattcaaatgacctatatttgcagggatagaaagacctatttaagccaaccacctcacccaatcatcacttg 25317093  T
Q  205 ccacat-ggcaccacgtcgctaatgacaacccacctcagc 243  Q
    |||||| || |||||||||||||||||| |||||||||||    
T  25317094 ccacatgggtaccacgtcgctaatgacagcccacctcagc 25317133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 18 - 243
Target Start/End: Original strand, 8323082 - 8323312
Alignment:
Q  18 aaatataggtcatttgaattttcgcctctaaagtta----tcctttcattttgctattgtaaatattaatcatttaaaaaatggtcctaattacatctga 113  Q
    |||||||||||||||||||||||| |  | ||||||    ||||| |||||||| |||| | ||||||||||||| ||||||| || |||||||||||||    
T  8323082 aaatataggtcatttgaattttcgtccatgaagttactaatccttccattttgccattgaagatattaatcatttgaaaaatgatcataattacatctga 8323181  T
Q  114 ttaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagccaaccacctcactcaatcatcacttgccacat-gg 212  Q
    ||| ||||||||| ||| |||||||||||  |||| |||||| | |||||||||| |||||||| |||||||||| | |||||||||||||||||||  |    
T  8323182 ttagtaacttcagggacaaaaattcaaatggcctatatttgctgggacgaaagacctatttaagtcaaccacctcgcccaatcatcacttgccacataag 8323281  T
Q  213 caccacgtcgctaatgacaacccacctcagc 243  Q
    |||||||||| |||||| | |||||||||||    
T  8323282 caccacgtcgttaatgatagcccacctcagc 8323312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 10 - 239
Target Start/End: Original strand, 18934731 - 18934965
Alignment:
Q  10 atccctccaaatataggtcatttgaattttcgcctctaaagtta----tcctttcattttgctattgtaaatattaatcatttaaaaaatggtcctaatt 105  Q
    |||||| |||||||| |||||||||||||||| |  | ||||||    |||||||||||||| |||| |||||||| |||||| |||||||||| |||||    
T  18934731 atccctgcaaatataagtcatttgaattttcgtccatgaagttactaatcctttcattttgccattgcaaatattagtcatttgaaaaatggtcataatt 18934830  T
Q  106 acatctgattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagccaaccacctcactcaatcatcacttgc 205  Q
    ||| ||||||| ||||||| | || |||||||||||| ||||| |||| ||| ||||||| || |||||||||||| |||||  | ||||||||||||||    
T  18934831 acaactgattagtaacttccgggatgaaaattcaaatgacctatatttacagggacgaaatacctatttaagccaatcaccttgcccaatcatcacttgc 18934930  T
Q  206 cacatg-gcaccacgtcgctaatgacaacccacct 239  Q
    |||||| ||||||||||| ||||||||||| ||||    
T  18934931 cacatgtgcaccacgtcgttaatgacaacctacct 18934965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 10 - 221
Target Start/End: Complemental strand, 16118317 - 16118101
Alignment:
Q  10 atccctccaaatataggtcatttgaattttcgcctctaaagtta----tcctttcattttgctattgtaaatattaatcatttaaaaaatggtcctaatt 105  Q
    |||||| |||||||| | | |||||||||||| | |||||| ||    || || ||||| || |||| ||||||| ||||||| ||||||||||||||||    
T  16118317 atccctgcaaatataagccgtttgaattttcgtccctaaagatactaatctttccatttcgccattgcaaatattcatcatttgaaaaatggtcctaatt 16118218  T
Q  106 acatctgattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagccaaccacctcactcaatcatcacttgc 205  Q
    |||| |||||| |||||| |||||||||||||||||| ||||| |||||||| |||||||||| ||||||||||||||| ||| | ||||||||||||||    
T  16118217 acatatgattagtaactttagagacgaaaattcaaatgacctatatttgcagggacgaaagacctatttaagccaaccatctcgcccaatcatcacttgc 16118118  T
Q  206 cacatg-gcaccacgtc 221  Q
    |||||| ||||||||||    
T  16118117 cacatgtgcaccacgtc 16118101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 101 - 243
Target Start/End: Original strand, 18013725 - 18013868
Alignment:
Q  101 taattacatctgattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagccaaccacctcactcaatcatca 200  Q
    |||||||||||||||| ||||||||| ||||||||||||||| ||||| |||||||| || ||||||| ||||||||| ||||||||| |||||||||||    
T  18013725 taattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcagggatgaaagacttatttaagcaaaccacctcgctcaatcatca 18013824  T
Q  201 cttgccacatg-gcaccacgtcgctaatgacaacccacctcagc 243  Q
    |||| |||||| ||||||||||||||||||||  ||||||||||    
T  18013825 cttgtcacatgcgcaccacgtcgctaatgacagtccacctcagc 18013868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 74 - 243
Target Start/End: Complemental strand, 7015807 - 7015637
Alignment:
Q  74 aaatattaatcatttaaaaaatggtcctaattacatctgattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatt 173  Q
    ||||||||||||||| |||||| |||||||||||||||||||| |||||| || || |||||||||||| |  || |||||||| ||| |||||| ||||    
T  7015807 aaatattaatcatttgaaaaatagtcctaattacatctgattagtaactttagggatgaaaattcaaatgatatatatttgcagggacaaaagacctatt 7015708  T
Q  174 taagccaaccacctcactcaatcatcacttgccacat-ggcaccacgtcgctaatgacaacccacctcagc 243  Q
    |||||||||||||||   ||||||||||||||||||| ||||||||||||||||||| | |||| ||||||    
T  7015707 taagccaaccacctcgtccaatcatcacttgccacataggcaccacgtcgctaatgatagcccatctcagc 7015637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 11 - 239
Target Start/End: Complemental strand, 32052589 - 32052356
Alignment:
Q  11 tccctccaaatataggtcatttgaattttcgcctctaaagtta----tcctttcattttgctattgtaaatattaatcatttaaaaaatggtcctaatta 106  Q
    ||||| ||||||||||||||||||||||||| | || ||||||    ||||| || | |||   || ||||||||||||||| |    ||||||||||||    
T  32052589 tccctgcaaatataggtcatttgaattttcgtccctgaagttactaatccttccaatctgcccctgcaaatattaatcatttgacttttggtcctaatta 32052490  T
Q  107 catctgattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagccaaccacctcactcaatcatcacttgcc 206  Q
    |||||||||| ||||||||| ||||||||||||||| | ||| |||||||| || |||| || ||||||||| ||||||||| | |||| ||| ||||||    
T  32052489 catctgattagtaacttcagggacgaaaattcaaatgaactatatttgcagggatgaaaaacctatttaagcaaaccacctcgcccaatgatcgcttgcc 32052390  T
Q  207 acat-ggcaccacgtcgctaatgacaacccacct 239  Q
    |||| ||||||||||||||||||||| |||||||    
T  32052389 acatgggcaccacgtcgctaatgacagcccacct 32052356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 12 - 243
Target Start/End: Complemental strand, 6421986 - 6421750
Alignment:
Q  12 ccctccaaatataggtcatttgaattttcgcctctaaagtta----tcctttcattttgctattgtaaatattaatcatttaaaaaatggtcctaattac 107  Q
    |||| |||||||| |||||||||||||||| | || || |||    |||||||| | |||   || ||||||||||||||| |    ||||||||| |||    
T  6421986 ccctgcaaatataagtcatttgaattttcgtccctgaaattactaatcctttcaatatgcccctgcaaatattaatcatttgacttttggtcctaagtac 6421887  T
Q  108 atctgattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagccaaccacctcactcaatcatcacttgcca 207  Q
    ||||||||| ||||||||| ||||||||||||||| ||||| |||||||| || ||||||| |||||| || ||||||||  | |||||||||| |||||    
T  6421886 atctgattagtaacttcagggacgaaaattcaaatgacctatatttgcagggatgaaagacctatttacgcaaaccaccttgcccaatcatcacatgcca 6421787  T
Q  208 cat-ggcaccacgtcgctaatgacaacccacctcagc 243  Q
    ||| |||||||||||||||||||||| ||||||||||    
T  6421786 catgggcaccacgtcgctaatgacaatccacctcagc 6421750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 102 - 243
Target Start/End: Original strand, 12990902 - 12991044
Alignment:
Q  102 aattacatctgattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagccaaccacctcactcaatcatcac 201  Q
    ||||||||||||||| ||||||||  ||||||||||||||| ||||| |||||||| || ||||||| ||||||||| ||||||||| | ||||||||||    
T  12990902 aattacatctgattagtaacttcatggacgaaaattcaaatgacctatatttgcagggatgaaagacctatttaagcaaaccacctcgcccaatcatcac 12991001  T
Q  202 ttgccacat-ggcaccacgtcgctaatgacaacccacctcagc 243  Q
    ||| ||||| ||||||||||||||||||||| |||||||||||    
T  12991002 ttgtcacatgggcaccacgtcgctaatgacagcccacctcagc 12991044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 102 - 243
Target Start/End: Original strand, 13064523 - 13064665
Alignment:
Q  102 aattacatctgattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagccaaccacctcactcaatcatcac 201  Q
    ||||||||||||||| ||||||||  ||||||||||||||| ||||| |||||||| || ||||||| ||||||||| ||||||||| | ||||||||||    
T  13064523 aattacatctgattagtaacttcatggacgaaaattcaaatgacctatatttgcagggatgaaagacctatttaagcaaaccacctcgcccaatcatcac 13064622  T
Q  202 ttgccacat-ggcaccacgtcgctaatgacaacccacctcagc 243  Q
    ||| ||||| ||||||||||||||||||||| |||||||||||    
T  13064623 ttgtcacatgggcaccacgtcgctaatgacagcccacctcagc 13064665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 17 - 188
Target Start/End: Complemental strand, 22024229 - 22024054
Alignment:
Q  17 caaatataggtcatttgaattttcgcctctaaagtta----tcctttcattttgctattgtaaatattaatcatttaaaaaatggtcctaattacatctg 112  Q
    ||||||||||||||||||||||||| | || ||||||    ||||| || ||||| | || ||||||||||||||| ||||||||||||||||||||| |    
T  22024229 caaatataggtcatttgaattttcgtcacttaagttactaatccttccaatttgccactgcaaatattaatcatttgaaaaatggtcctaattacatcgg 22024130  T
Q  113 attaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagccaaccacctc 188  Q
    || | ||||||||  ||||||||||||||| ||||| |||||||| |||||||||| ||| |||||||||||||||    
T  22024129 ataagtaacttcaaggacgaaaattcaaatgacctatatttgcagggacgaaagacctatataagccaaccacctc 22024054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 18 - 241
Target Start/End: Original strand, 37945020 - 37945248
Alignment:
Q  18 aaatataggtcatttgaattttcgcctctaaagtta----tcctttcattttgctattgtaaatattaatcatttaaaaaatggtcctaattacatctga 113  Q
    |||||||||||||||||||||||| | || ||||||    ||||| || |||||   || ||||||||||||||| |    |||||||||||||||||||    
T  37945020 aaatataggtcatttgaattttcgtccctgaagttactaatccttccaatttgcccctgcaaatattaatcatttgacttttggtcctaattacatctga 37945119  T
Q  114 ttaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagccaaccacctcactcaatcatcacttgccacat-gg 212  Q
    ||| ||||||||  ||||||||||||| | | ||| |||||||| || ||||||| ||||||||| || | ||||   ||||||||||||||||||| ||    
T  37945120 ttagtaacttcatggacgaaaattcaattgatctatatttgcagggatgaaagacctatttaagcaaatcgcctcgtccaatcatcacttgccacatggg 37945219  T
Q  213 caccacgtcgctaatgacaacccacctca 241  Q
    ||||||||||||||||||| |||||||||    
T  37945220 caccacgtcgctaatgacagcccacctca 37945248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 160 - 243
Target Start/End: Original strand, 9915503 - 9915587
Alignment:
Q  160 acgaaagacgtatttaagccaaccacctcactcaatcatcacttgccacatg-gcaccacgtcgctaatgacaacccacctcagc 243  Q
    ||||||||| ||||||||||||||||||| | |||||||||||||| ||||| ||||||||||||||| |||| |||| ||||||    
T  9915503 acgaaagacctatttaagccaaccacctcgcccaatcatcacttgcgacatgagcaccacgtcgctaacgacagcccaactcagc 9915587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 112 - 179
Target Start/End: Original strand, 22024187 - 22024254
Alignment:
Q  112 gattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagcc 179  Q
    ||||| |||||| || ||||||||||||||| ||||| ||||||||||||||||||||||||||||||    
T  22024187 gattagtaacttaagtgacgaaaattcaaatgacctatatttgcagagacgaaagacgtatttaagcc 22024254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 112 - 180
Target Start/End: Original strand, 12991105 - 12991173
Alignment:
Q  112 gattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagcca 180  Q
    ||||| ||||||||||||||||||||||||| || || |||||||| |||||||||| |||||||||||    
T  12991105 gattagtaacttcagagacgaaaattcaaatgacatatatttgcagggacgaaagacatatttaagcca 12991173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 112 - 179
Target Start/End: Original strand, 25253403 - 25253470
Alignment:
Q  112 gattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagcc 179  Q
    ||||| ||||||||| ||||||||||||||| ||||| |||||||| |||||||||| ||||||||||    
T  25253403 gattagtaacttcagggacgaaaattcaaatgacctatatttgcagggacgaaagacatatttaagcc 25253470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 112 - 179
Target Start/End: Original strand, 25317194 - 25317261
Alignment:
Q  112 gattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagcc 179  Q
    ||||| ||||||||| ||||||||||||||| ||||| |||||||| |||||||||| ||||||||||    
T  25317194 gattagtaacttcagggacgaaaattcaaatgacctatatttgcagggacgaaagacatatttaagcc 25317261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 112 - 179
Target Start/End: Original strand, 32052541 - 32052608
Alignment:
Q  112 gattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagcc 179  Q
    ||||| ||||||||| ||||||||||||||| ||||| |||||||| |||||||||| ||||||||||    
T  32052541 gattagtaacttcagggacgaaaattcaaatgacctatatttgcagggacgaaagacatatttaagcc 32052608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 112 - 179
Target Start/End: Original strand, 33735630 - 33735697
Alignment:
Q  112 gattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagcc 179  Q
    ||||| ||||||||| ||||||||||||||| ||||| |||||||| |||||||||| ||||||||||    
T  33735630 gattagtaacttcagggacgaaaattcaaatgacctatatttgcagggacgaaagacctatttaagcc 33735697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 90 - 167
Target Start/End: Original strand, 12628317 - 12628394
Alignment:
Q  90 aaaaatggtcctaattacatctgattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaaga 167  Q
    ||||||||| |||||||||||| |||| ||||||||| ||||||||||||||| || || |||||||  |||||||||    
T  12628317 aaaaatggttctaattacatcttattagtaacttcagggacgaaaattcaaatcacttatatttgcatggacgaaaga 12628394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 112 - 180
Target Start/End: Original strand, 13064726 - 13064794
Alignment:
Q  112 gattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagcca 180  Q
    ||||| |||||| |||||||||||||||||| || || |||||||| |||||||||| |||||||||||    
T  13064726 gattagtaactttagagacgaaaattcaaatgacatatatttgcagggacgaaagacatatttaagcca 13064794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 111 - 179
Target Start/End: Complemental strand, 22533458 - 22533390
Alignment:
Q  111 tgattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagcc 179  Q
    |||||||||||||||| ||||||||||||||| ||||| |||||||  | |||||||| ||||||||||    
T  22533458 tgattaataacttcagggacgaaaattcaaatgacctatatttgcaagggcgaaagacctatttaagcc 22533390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 112 - 179
Target Start/End: Complemental strand, 14745515 - 14745448
Alignment:
Q  112 gattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagcc 179  Q
    ||||| ||||||||| || |||||||||||| ||||| |||||||| |||||||||| ||||||||||    
T  14745515 gattagtaacttcagggatgaaaattcaaatgacctatatttgcagggacgaaagacctatttaagcc 14745448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 112 - 179
Target Start/End: Complemental strand, 34404551 - 34404484
Alignment:
Q  112 gattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagcc 179  Q
    ||||| ||||||||| ||||||||||||||| ||||| ||||||||  ||||||||| ||||||||||    
T  34404551 gattagtaacttcagtgacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagcc 34404484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 112 - 178
Target Start/End: Complemental strand, 21260932 - 21260866
Alignment:
Q  112 gattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagc 178  Q
    ||||| ||||||||| ||||||||||||||| ||||| |||||||| |||||||||  |||||||||    
T  21260932 gattagtaacttcagggacgaaaattcaaatgacctatatttgcagggacgaaagaactatttaagc 21260866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 192 - 243
Target Start/End: Original strand, 20704917 - 20704969
Alignment:
Q  192 caatcatcacttgccacatgg-caccacgtcgctaatgacaacccacctcagc 243  Q
    |||||||||||||| |||||| ||||||||||||||||||| |||||||||||    
T  20704917 caatcatcacttgctacatgggcaccacgtcgctaatgacagcccacctcagc 20704969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 112 - 179
Target Start/End: Complemental strand, 32052291 - 32052224
Alignment:
Q  112 gattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagcc 179  Q
    ||||| ||||||||| ||||||||||||||| ||||| |||| ||| ||||||| || ||||||||||    
T  32052291 gattagtaacttcagggacgaaaattcaaatgacctatatttacagggacgaaaaacatatttaagcc 32052224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 112 - 179
Target Start/End: Complemental strand, 37945061 - 37944994
Alignment:
Q  112 gattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagcc 179  Q
    ||||| ||||||||| ||||||||||||||| ||||| |||| ||  |||||||||| ||||||||||    
T  37945061 gattagtaacttcagggacgaaaattcaaatgacctatatttacaaggacgaaagacctatttaagcc 37944994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 112 - 179
Target Start/End: Original strand, 37945311 - 37945377
Alignment:
Q  112 gattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagcc 179  Q
    ||||| ||||||||| ||||||||||| ||| ||||| |||||||| |||||||||| ||||||||||    
T  37945311 gattagtaacttcagggacgaaaattc-aatgacctatatttgcagggacgaaagacatatttaagcc 37945377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 53
Target Start/End: Original strand, 16118163 - 16118205
Alignment:
Q  11 tccctccaaatataggtcatttgaattttcgcctctaaagtta 53  Q
    ||||| ||||||||||||||||||||||||| |||||||||||    
T  16118163 tccctgcaaatataggtcatttgaattttcgtctctaaagtta 16118205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 112 - 178
Target Start/End: Complemental strand, 25253153 - 25253087
Alignment:
Q  112 gattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagc 178  Q
    ||||| ||||||||| ||||||||||||||| | ||| |||||||| || ||||||| |||||||||    
T  25253153 gattagtaacttcagggacgaaaattcaaatgaactatatttgcagggatgaaagacatatttaagc 25253087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 112 - 178
Target Start/End: Complemental strand, 25316943 - 25316877
Alignment:
Q  112 gattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagc 178  Q
    ||||| ||||||||| ||||||||||||||| | ||| |||||||| || ||||||| |||||||||    
T  25316943 gattagtaacttcagggacgaaaattcaaatgaactatatttgcagggatgaaagacatatttaagc 25316877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 111 - 179
Target Start/End: Complemental strand, 7015576 - 7015508
Alignment:
Q  111 tgattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagcc 179  Q
    |||||| ||||||||  || ||||||||||||  |||| |||||||| |||||||||| ||||||||||    
T  7015576 tgattagtaacttcatggatgaaaattcaaatggcctatatttgcagggacgaaagacctatttaagcc 7015508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 112 - 180
Target Start/End: Original strand, 7015826 - 7015894
Alignment:
Q  112 gattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagcca 180  Q
    ||||| ||||||||| ||||||||||||||  || || |||||||  |||||||||| |||||||||||    
T  7015826 gattagtaacttcagggacgaaaattcaaacgacttatatttgcaaggacgaaagacctatttaagcca 7015894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 112 - 176
Target Start/End: Complemental strand, 16118028 - 16117964
Alignment:
Q  112 gattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaa 176  Q
    ||||| ||||||||| ||||||||||||||| ||||| |||| ||| ||| |||||| |||||||    
T  16118028 gattagtaacttcagggacgaaaattcaaatgacctatatttacagggacaaaagacctatttaa 16117964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 113 - 180
Target Start/End: Original strand, 8323374 - 8323441
Alignment:
Q  113 attaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagcca 180  Q
    |||| ||||||||  |||||||||||||||| | || |||||||| | |||||||| |||||||||||    
T  8323374 attagtaacttcaaggacgaaaattcaaatagcatatatttgcaggggcgaaagacctatttaagcca 8323441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 53
Target Start/End: Complemental strand, 13064774 - 13064732
Alignment:
Q  11 tccctccaaatataggtcatttgaattttcgcctctaaagtta 53  Q
    ||||| |||||||| |||||||||||||||| |||||||||||    
T  13064774 tccctgcaaatatatgtcatttgaattttcgtctctaaagtta 13064732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 112 - 178
Target Start/End: Complemental strand, 18934780 - 18934714
Alignment:
Q  112 gattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagc 178  Q
    ||||| ||||||||  ||||||||||||||| || || |||||||| || ||||||| |||||||||    
T  18934780 gattagtaacttcatggacgaaaattcaaatgacttatatttgcagggatgaaagacatatttaagc 18934714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 53
Target Start/End: Original strand, 27753691 - 27753733
Alignment:
Q  11 tccctccaaatataggtcatttgaattttcgcctctaaagtta 53  Q
    ||||| ||||||||||||||||||||||||| | |||||||||    
T  27753691 tccctgcaaatataggtcatttgaattttcgtccctaaagtta 27753733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 127 - 180
Target Start/End: Complemental strand, 9915483 - 9915430
Alignment:
Q  127 agacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagcca 180  Q
    |||||||||||||||| ||||| ||||  || |||||||||| |||||||||||    
T  9915483 agacgaaaattcaaatgacctatatttatagggacgaaagacctatttaagcca 9915430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 112 - 165
Target Start/End: Original strand, 22533707 - 22533760
Alignment:
Q  112 gattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaa 165  Q
    ||||| ||||||| | ||||||||||||||| ||||| |||||||| |||||||    
T  22533707 gattagtaacttcggggacgaaaattcaaatgacctatatttgcagggacgaaa 22533760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 118 - 179
Target Start/End: Complemental strand, 31119016 - 31118955
Alignment:
Q  118 taacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagcc 179  Q
    ||||||||| || ||||||||||||  |||| |||||||| |||||||||  ||||||||||    
T  31119016 taacttcagggatgaaaattcaaatggcctatatttgcagggacgaaagatctatttaagcc 31118955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 112 - 176
Target Start/End: Complemental strand, 6421689 - 6421625
Alignment:
Q  112 gattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaa 176  Q
    ||||| ||||||||  ||| ||||||||||| || || |||||||| |||||||||| |||||||    
T  6421689 gattagtaacttcaaggacaaaaattcaaatgacatatatttgcagggacgaaagacatatttaa 6421625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 112 - 176
Target Start/End: Original strand, 6421939 - 6422003
Alignment:
Q  112 gattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaa 176  Q
    ||||| ||| ||||| ||||||||||||||| || || |||||||| | |||||||| |||||||    
T  6421939 gattagtaatttcagggacgaaaattcaaatgacttatatttgcaggggcgaaagacctatttaa 6422003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 112 - 168
Target Start/End: Original strand, 14745630 - 14745686
Alignment:
Q  112 gattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagac 168  Q
    ||||| ||||||||| |||||||||||||||  |||| ||||| || ||||||||||    
T  14745630 gattagtaacttcagcgacgaaaattcaaatggcctatatttgtagggacgaaagac 14745686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 112 - 177
Target Start/End: Original strand, 20705029 - 20705096
Alignment:
Q  112 gattaataacttcagagacgaaaattcaaataacc--taaatttgcagagacgaaagacgtatttaag 177  Q
    ||||| |||||||| |||||||||||||||| |||  || |||| ||| |||||||||| ||||||||    
T  20705029 gattagtaacttcaaagacgaaaattcaaatgacctatatatttacagggacgaaagacatatttaag 20705096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 9 - 41
Target Start/End: Complemental strand, 25317050 - 25317018
Alignment:
Q  9 tatccctccaaatataggtcatttgaattttcg 41  Q
    ||||||| |||||||||||||||||||||||||    
T  25317050 tatccctgcaaatataggtcatttgaattttcg 25317018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 125; Significance: 2e-64; HSPs: 51)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 11 - 243
Target Start/End: Original strand, 8286951 - 8287188
Alignment:
Q  11 tccctccaaatataggtcatttgaattttcgcctctaaagtta----tcctttcattttgctattgtaaatattaatcatttaaaaaatggtcctaatta 106  Q
    ||||| |||||||| | |||||||||||||| |||| ||||||    ||||| |||||||| |||| ||||||||||||||| |||||||||||||||||    
T  8286951 tccctgcaaatataagccatttgaattttcgtctctgaagttaataatccttccattttgccattgcaaatattaatcatttgaaaaatggtcctaatta 8287050  T
Q  107 catctgattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagccaaccacctcactcaatcatcacttgcc 206  Q
    |||||||||| ||||||||| ||||||||||||||| ||||| ||||||||  ||||||||| |||||||||||||| |||| | |||||||| ||||||    
T  8287051 catctgattagtaacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagccaaccgcctcgcccaatcatcccttgcc 8287150  T
Q  207 acat-ggcaccacgtcgctaatgacaacccacctcagc 243  Q
    |||| |||||||||| |||||||||| |||||||||||    
T  8287151 acatgggcaccacgttgctaatgacagcccacctcagc 8287188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 11 - 231
Target Start/End: Complemental strand, 35731026 - 35730801
Alignment:
Q  11 tccctccaaatataggtcatttgaattttcgcctctaaagtta----tcctttcattttgctattgtaaatattaatcatttaaaaaatggtcctaatta 106  Q
    ||||| ||||||||||||||||||||||||| | || ||||||    ||||| |||| ||  |||| ||||||||||||||| |||||| ||||||||||    
T  35731026 tccctgcaaatataggtcatttgaattttcgtccctgaagttactaatccttccattatgtcattgcaaatattaatcatttgaaaaatagtcctaatta 35730927  T
Q  107 catctgattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagccaaccacctcactcaatcatcacttgcc 206  Q
    |||||||||| ||||||||  ||||||||||||||| ||||| |||||||  |||||||||  ||||||||||||||||||||| |||||||||||||||    
T  35730926 catctgattagtaacttcaaggacgaaaattcaaatgacctatatttgcatggacgaaagaactatttaagccaaccacctcacccaatcatcacttgcc 35730827  T
Q  207 acatgg-caccacgtcgctaatgaca 231  Q
    |||||| |||||||||||||||||||    
T  35730826 acatggacaccacgtcgctaatgaca 35730801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 53 - 243
Target Start/End: Complemental strand, 489503 - 489311
Alignment:
Q  53 atcctttcattttgctattgtaaatattaatcattt-aaaaaatggtcctaattacatctgattaataacttcagagacgaaaattcaaataacctaaat 151  Q
    |||||| |||||||| |||| ||||||||||||||| ||||||||||| ||||||||| |||||| ||| || || |||| |||||||||  ||||| ||    
T  489503 atccttccattttgccattgcaaatattaatcatttgaaaaaatggtcataattacatatgattagtaaatttagggacggaaattcaaacgacctatat 489404  T
Q  152 ttgcagagacgaaagacgtatttaagccaaccacctcactcaatcatcacttgccacat-ggcaccacgtcgctaatgacaacccacctcagc 243  Q
    |||||| |||||||||| ||||||||||||||||||||| |||||||||||||||| || |||||||||||||||| ||||||||||||||||    
T  489403 ttgcagggacgaaagacctatttaagccaaccacctcacccaatcatcacttgccaaatgggcaccacgtcgctaacgacaacccacctcagc 489311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 53 - 243
Target Start/End: Complemental strand, 515295 - 515103
Alignment:
Q  53 atcctttcattttgctattgtaaatattaatcattt-aaaaaatggtcctaattacatctgattaataacttcagagacgaaaattcaaataacctaaat 151  Q
    |||||| |||||||| |||| ||||||||||||||| ||||||||||| ||||||||| |||||| ||| || || |||| |||||||||  ||||| ||    
T  515295 atccttccattttgccattgcaaatattaatcatttgaaaaaatggtcataattacatatgattagtaaatttagggacggaaattcaaacgacctatat 515196  T
Q  152 ttgcagagacgaaagacgtatttaagccaaccacctcactcaatcatcacttgccacat-ggcaccacgtcgctaatgacaacccacctcagc 243  Q
    |||||| |||||||||| ||||||||||||||||||||| |||||||||||||||| || |||||||||||||||| ||||||||||||||||    
T  515195 ttgcagggacgaaagacctatttaagccaaccacctcacccaatcatcacttgccaaatgggcaccacgtcgctaacgacaacccacctcagc 515103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 74 - 239
Target Start/End: Complemental strand, 37678146 - 37677980
Alignment:
Q  74 aaatattaatcatttaaaaaatggtcctaattacatctgattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatt 173  Q
    ||||||||||||||| ||||||||| ||||||||||||||||| ||||||||| ||||||||||||||| ||||| |||||||| |||||||||| ||||    
T  37678146 aaatattaatcatttgaaaaatggttctaattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcagggacgaaagacctatt 37678047  T
Q  174 taagccaaccacctcactcaatcatcacttgccacat-ggcaccacgtcgctaatgacaacccacct 239  Q
    ||||||||||||||| | ||||||||||||||||||| ||||||||| | ||||||| | |||||||    
T  37678046 taagccaaccacctcgcccaatcatcacttgccacatgggcaccacgccactaatgatagcccacct 37677980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 74 - 243
Target Start/End: Original strand, 12691492 - 12691662
Alignment:
Q  74 aaatattaatcatttaaaaaatggtcctaattacatctgattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatt 173  Q
    ||||||||||||||| |    |||||||||||||||||||||| ||||||||| ||||||||||||||| ||||| |||||||| || ||||||| ||||    
T  12691492 aaatattaatcatttgacttttggtcctaattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcagggatgaaagacttatt 12691591  T
Q  174 taagccaaccacctcactcaatcatcacttgccacat-ggcaccacgtcgctaatgacaacccacctcagc 243  Q
    ||||| ||||||||| | ||||||||||||||||||| ||||||||||||||||||||| |||||||||||    
T  12691592 taagcaaaccacctcgcccaatcatcacttgccacatgggcaccacgtcgctaatgacagcccacctcagc 12691662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 11 - 236
Target Start/End: Complemental strand, 19917021 - 19916791
Alignment:
Q  11 tccctccaaatataggtcatttgaattttcgcctctaaagtta----tcctttcattttgctattgtaaatattaatcatttaaaaaatggtcctaatta 106  Q
    ||||| |||||||||||||||| |||||||| || | ||||||    || ||||| | ||| | || ||||||||||||||| |||||||||| ||||||    
T  19917021 tccctgcaaatataggtcatttaaattttcgtctttgaagttactaatcatttcaatctgccactgcaaatattaatcatttgaaaaatggtcataatta 19916922  T
Q  107 catctgattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagccaaccacctcactcaatcatcacttgcc 206  Q
    |||||||||| ||| ||||| |||||||||||| || || || | |||| |  ||||||||| ||||||||||||||||||| | |||||||||||||||    
T  19916921 catctgattagtaatttcagggacgaaaattcatatgacttataattgctggaacgaaagacctatttaagccaaccacctcgcccaatcatcacttgcc 19916822  T
Q  207 acat-ggcaccacgtcgctaatgacaaccca 236  Q
    |||| |||||||| |||||||||||||||||    
T  19916821 acatgggcaccacatcgctaatgacaaccca 19916791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 97 - 241
Target Start/End: Complemental strand, 22250008 - 22249863
Alignment:
Q  97 gtcctaattacatctgattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagccaaccacctcactcaatc 196  Q
    |||||||||||||||||||| ||||||||| || |||||||||||| ||||| |||||||| || ||||||| ||||||||| ||||||||||| |||||    
T  22250008 gtcctaattacatctgattagtaacttcagggatgaaaattcaaatgacctatatttgcagggatgaaagacttatttaagcaaaccacctcacccaatc 22249909  T
Q  197 atcacttgccacat-ggcaccacgtcgctaatgacaacccacctca 241  Q
    |||||||||||||| ||||||||| ||||||||||| |||||||||    
T  22249908 atcacttgccacatgggcaccacgccgctaatgacagcccacctca 22249863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 18 - 236
Target Start/End: Original strand, 34238496 - 34238718
Alignment:
Q  18 aaatataggtcatttgaattttcgcctctaaagtta----tcctttcattttgctattgtaaatattaatcatttaaaaaatggtcctaattacatctga 113  Q
    |||||||||  ||||||||||||| |||| ||||||    |||||||| | |||   || ||||||||||||||| |    ||||| |||||||||||||    
T  34238496 aaatataggctatttgaattttcgtctctgaagttactaatcctttcaatatgcccctgcaaatattaatcatttgacttttggtcataattacatctga 34238595  T
Q  114 ttaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagccaaccacctcactcaatcatcacttgccacatggc 213  Q
    ||| ||||||||| ||||||||||||||| |||||||||||||| || |||| || ||||||||| || |||||| | ||||||||||||||||||||||    
T  34238596 ttagtaacttcagggacgaaaattcaaatgacctaaatttgcagggatgaaaaacctatttaagcaaatcacctcgcccaatcatcacttgccacatggc 34238695  T
Q  214 accacgtcgctaatgacaaccca 236  Q
    |||||| ||||||||||| ||||    
T  34238696 accacgccgctaatgacagccca 34238718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 10 - 243
Target Start/End: Original strand, 47862170 - 47862408
Alignment:
Q  10 atccctccaaatataggtcatttgaattttcgcctctaaagtta----tcctttcattttgctattgtaaatattaatcatttaaaaaatggtcctaatt 105  Q
    |||||| |||||||| |||||||||||||||| |||| ||||||    ||||| || | |||   || ||||| ||||||||| |    | |||||||||    
T  47862170 atccctgcaaatatatgtcatttgaattttcgtctctgaagttactaatccttccaatctgcccctgcaaatactaatcatttgactttttgtcctaatt 47862269  T
Q  106 acatctgattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagccaaccacctcactcaatcatcacttgc 205  Q
    ||||||||||| ||||||||| ||||||||||||||| ||||| |||||||| || ||||||| ||||||||| ||||||||| | ||||||||||||||    
T  47862270 acatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcagggatgaaagacctatttaagcaaaccacctcgcccaatcatcacttgc 47862369  T
Q  206 cacat-ggcaccacgtcgctaatgacaacccacctcagc 243  Q
    ||||| || |||||||| ||||||||| |||||||||||    
T  47862370 cacatgggtaccacgtcactaatgacatcccacctcagc 47862408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 53 - 231
Target Start/End: Original strand, 27813114 - 27813292
Alignment:
Q  53 atcctttcattttgctattgtaaatattaatcatttaaaaaatggtcctaattacatctgattaataacttcagagacgaaaattcaaataacctaaatt 152  Q
    |||||| |||||||  |||| ||||| ||||||||| ||||||||| |||||||||||||||||  | |||||| ||||||||||||||| | ||| |||    
T  27813114 atccttccattttgtcattgcaaatactaatcatttgaaaaatggttctaattacatctgattag-atcttcagggacgaaaattcaaatgatctatatt 27813212  T
Q  153 tgcagagacgaaagacgtatttaagccaaccacctcactcaatcatcacttgccacat-ggcaccacgtcgctaatgaca 231  Q
    ||||| |||||||||| ||||||||||||||||||  | || |||||||||||||||| |||||||||||||||||||||    
T  27813213 tgcagggacgaaagacctatttaagccaaccaccttgcccagtcatcacttgccacatgggcaccacgtcgctaatgaca 27813292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 74 - 239
Target Start/End: Original strand, 53559473 - 53559639
Alignment:
Q  74 aaatattaatcatttaaaaaatggtcctaattacatctgattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatt 173  Q
    ||||||||||||||| |    |||||||||||||||||||||| ||||||||| ||||||||||||||| ||||| |||||||| || ||||||| |||     
T  53559473 aaatattaatcatttgacttttggtcctaattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcagggatgaaagacctatg 53559572  T
Q  174 taagccaaccacctcactcaatcatcacttgccacat-ggcaccacgtcgctaatgacaacccacct 239  Q
    ||||| ||||||||| | ||||||||||||||||||| ||||||||||| ||||||||| |||||||    
T  53559573 taagcaaaccacctcgcccaatcatcacttgccacatgggcaccacgtcactaatgacagcccacct 53559639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 97 - 241
Target Start/End: Complemental strand, 20086712 - 20086567
Alignment:
Q  97 gtcctaattacatctgattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagccaaccacctcactcaatc 196  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||  ||||| |||||||| || ||||||| ||||||||| || |||||| | |||||    
T  20086712 gtcctaattacatctgattagtaacttcagggacgaaaattcaaaggacctatatttgcagggatgaaagacctatttaagcaaatcacctcgcccaatc 20086613  T
Q  197 atcacttgccacat-ggcaccacgtcgctaatgacaacccacctca 241  Q
    |||||||||||||| ||||||||||||||||||||| |||||||||    
T  20086612 atcacttgccacatgggcaccacgtcgctaatgacagcccacctca 20086567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 74 - 243
Target Start/End: Complemental strand, 13872367 - 13872197
Alignment:
Q  74 aaatattaatcatttaaaaaatggtcctaattacatctgattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatt 173  Q
    ||||||||||||||| |    |||||||||||||||||||||| ||||||||  ||  ||||||||||| || || |||||||| || ||||||| ||||    
T  13872367 aaatattaatcatttgacttttggtcctaattacatctgattagtaacttcaaggataaaaattcaaatgacatatatttgcagggatgaaagacctatt 13872268  T
Q  174 taagccaaccacctcactcaatcatcacttgccacat-ggcaccacgtcgctaatgacaacccacctcagc 243  Q
    ||| |||||||| |||| ||||||||||||||||||| ||||||||||||||||||||| |||||||||||    
T  13872267 taaaccaaccacttcacccaatcatcacttgccacatgggcaccacgtcgctaatgacagcccacctcagc 13872197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 74 - 242
Target Start/End: Original strand, 33294230 - 33294398
Alignment:
Q  74 aaatattaatcatttaaaaaatggtcctaattacatctgattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatt 173  Q
    |||||||||||||||||    ||||| |||||||||||||||| ||||||| | ||||||||||||||| ||||| |||||||| || ||||||| ||||    
T  33294230 aaatattaatcatttaacttttggtcataattacatctgattagtaacttccgggacgaaaattcaaatgacctatatttgcagggatgaaagacatatt 33294329  T
Q  174 taagccaaccacctcactcaatcatcacttgccacat-ggcaccacgtcgctaatgacaacccacctcag 242  Q
    ||||| ||||||||| |  |||||||||||||||||| ||||||||||||| ||||||| ||||||||||    
T  33294330 taagcaaaccacctcgcctaatcatcacttgccacatgggcaccacgtcgc-aatgacagcccacctcag 33294398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 101 - 241
Target Start/End: Original strand, 54961544 - 54961685
Alignment:
Q  101 taattacatctgattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagccaaccacctcactcaatcatca 200  Q
    |||||||||||||||| ||||||||| || |||||||||| | ||||| ||||| || || ||||||| ||||||||| ||||||||  | |||||||||    
T  54961544 taattacatctgattagtaacttcagtgatgaaaattcaagtgacctatatttggagggatgaaagacctatttaagcaaaccacctagcccaatcatca 54961643  T
Q  201 cttgccacat-ggcaccacgtcgctaatgacaacccacctca 241  Q
    |||||||||| |||||||||||||||||||||||||||||||    
T  54961644 cttgccacatgggcaccacgtcgctaatgacaacccacctca 54961685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 76 - 212
Target Start/End: Original strand, 48507502 - 48507638
Alignment:
Q  76 atattaatcatttaaaaaatggtcctaattacatctgattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtattta 175  Q
    |||||||| |||| ||| ||||||||||||||| ||||||| ||||||||| ||||||||||||||| || || |||||||| |||||||||  ||||||    
T  48507502 atattaataatttgaaatatggtcctaattacacctgattagtaacttcagggacgaaaattcaaatgacttatatttgcagggacgaaagatctattta 48507601  T
Q  176 agccaaccacctcactcaatcatcacttgccacatgg 212  Q
    || ||||||||| || |||||||||||||||||||||    
T  48507602 agtcaaccaccttacccaatcatcacttgccacatgg 48507638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 10 - 231
Target Start/End: Complemental strand, 50246224 - 50245997
Alignment:
Q  10 atccctccaaatataggtcatttgaattttcgcctctaaagtta----tcctttcattttgctattgtaaatattaatcatttaaaaaatggtcctaatt 105  Q
    |||||| ||||||||||||||||||||||||| |  | ||||||    ||||| || | ||  | || ||||||||||||||| |||||||||  |||||    
T  50246224 atccctgcaaatataggtcatttgaattttcgtccatgaagttactaatccttccaatctgtcactgcaaatattaatcatttgaaaaatggttttaatt 50246125  T
Q  106 acatctgattaataacttcagag-acgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagccaaccacctcactcaatcatcacttg 204  Q
     ||| |||||| ||||||||| | |||||||||||||| || || | || ||| |||||||||| ||||||||||||||||||| | |||||||||||||    
T  50246124 gcatttgattagtaacttcaggggacgaaaattcaaatgacttataattacagggacgaaagacctatttaagccaaccacctcgcccaatcatcacttg 50246025  T
Q  205 ccacat-ggcaccacgtcgctaatgaca 231  Q
     | ||| |||||||||||||||||||||    
T  50246024 tcgcatgggcaccacgtcgctaatgaca 50245997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 98 - 230
Target Start/End: Original strand, 47980795 - 47980928
Alignment:
Q  98 tcctaattacatctgattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagccaaccacctcactcaatca 197  Q
    ||||||||||||||||||| ||||||||  ||||||||||||||| ||||  |||||||| || ||||||| ||||||||| || |||||| | ||||||    
T  47980795 tcctaattacatctgattagtaacttcatggacgaaaattcaaatgacctgtatttgcagggatgaaagacctatttaagcaaatcacctcgcccaatca 47980894  T
Q  198 tcacttgccacat-ggcaccacgtcgctaatgac 230  Q
    ||||||||||||| ||||||||||||||||||||    
T  47980895 tcacttgccacataggcaccacgtcgctaatgac 47980928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 11 - 243
Target Start/End: Original strand, 20600966 - 20601203
Alignment:
Q  11 tccctccaaatataggtcatttgaattttcgcctctaaagtt----atcctttcattttgctattgtaaatattaatcatttaaaaaatggtcctaatta 106  Q
    ||||| |||||||||||||||||||||||||  | | |||||    || ||| || ||||| | || || ||||||| |||| |||||| ||||||| ||    
T  20600966 tcccttcaaatataggtcatttgaattttcgtttttgaagttgctaattcttccaatttgccactgcaactattaataatttgaaaaattgtcctaacta 20601065  T
Q  107 catctgattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagccaaccacctcactcaatcatcacttgcc 206  Q
    ||||| |||||||||||||| ||||||||||| ||| ||||| | || ||  |||||||||| ||||||||||||||| ||    |||||||||||||||    
T  20601066 catcttattaataacttcagggacgaaaattcgaatgacctataattacaaggacgaaagacatatttaagccaaccatcttgtccaatcatcacttgcc 20601165  T
Q  207 acat-ggcaccacgtcgctaatgacaacccacctcagc 243  Q
    |||| || || |||||||||||||||||  ||||||||    
T  20601166 acatgggtactacgtcgctaatgacaactaacctcagc 20601203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 17 - 241
Target Start/End: Original strand, 32846387 - 32846614
Alignment:
Q  17 caaatataggtcatttgaattttcgcctctaaagttat----cctttcattttgctattgtaaatattaatcatttaaaaaatggtcctaattacatctg 112  Q
    |||||||||| ||||||||||||||   || |||||||    |||| |||||||| |||| ||||||||||||||| |||||||||| |||||||||||     
T  32846387 caaatataggccatttgaattttcgttcctgaagttattaatccttccattttgccattgcaaatattaatcatttgaaaaatggtcttaattacatctt 32846486  T
Q  113 attaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagccaaccacctcactcaatcatcacttgccacat-g 211  Q
    |||| ||||| ||| |||||||||||||||   | | ||||||| | ||||||||| |||||||  |||||| ||| |  ||| || | ||||||||| |    
T  32846487 attagtaactccagggacgaaaattcaaatggtcgatatttgca-aaacgaaagacctatttaa-acaaccatctcgcctaattataatttgccacatgg 32846584  T
Q  212 gcaccacgtcgctaatgacaacccacctca 241  Q
    |||||| |||||||||||||  ||||||||    
T  32846585 gcaccaagtcgctaatgacagtccacctca 32846614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 74 - 178
Target Start/End: Complemental strand, 26601374 - 26601270
Alignment:
Q  74 aaatattaatcatttaaaaaatggtcctaattacatctgattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatt 173  Q
    ||||||||||||||| |    |||||||||||||||||||||||||||||||||||||||||||||||| || || ||||| || || ||||||| ||||    
T  26601374 aaatattaatcatttgacttttggtcctaattacatctgattaataacttcagagacgaaaattcaaatgacttatatttgtagggatgaaagacctatt 26601275  T
Q  174 taagc 178  Q
    |||||    
T  26601274 taagc 26601270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 112 - 179
Target Start/End: Complemental strand, 13872136 - 13872069
Alignment:
Q  112 gattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagcc 179  Q
    ||||||||||||||  ||||||||||||||||||||| |||||||| |||||||||| ||||||||||    
T  13872136 gattaataacttcatggacgaaaattcaaataacctatatttgcagggacgaaagacatatttaagcc 13872069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 112 - 180
Target Start/End: Original strand, 47981953 - 47982021
Alignment:
Q  112 gattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagcca 180  Q
    ||||| ||||||||||||||||||||||||||  ||| |||||||| |||||||||| |||||||||||    
T  47981953 gattagtaacttcagagacgaaaattcaaatagtctatatttgcagggacgaaagacatatttaagcca 47982021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 112 - 181
Target Start/End: Complemental strand, 47862219 - 47862150
Alignment:
Q  112 gattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagccaa 181  Q
    ||||| ||||||||||||||||||||||||| || || |||||||| || ||||||| ||||||||||||    
T  47862219 gattagtaacttcagagacgaaaattcaaatgacatatatttgcagggatgaaagacctatttaagccaa 47862150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 112 - 180
Target Start/End: Complemental strand, 37677915 - 37677847
Alignment:
Q  112 gattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagcca 180  Q
    ||||| ||||||||| ||||||||||||||| ||||| |||||||| || ||||||| |||||||||||    
T  37677915 gattagtaacttcagggacgaaaattcaaatgacctatatttgcagggaagaaagacctatttaagcca 37677847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 112 - 176
Target Start/End: Original strand, 48507734 - 48507798
Alignment:
Q  112 gattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaa 176  Q
    ||||| ||||||||||||||||||||||||| ||||| ||||| || |||||||||| |||||||    
T  48507734 gattagtaacttcagagacgaaaattcaaatgacctatatttgtagggacgaaagacctatttaa 48507798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 112 - 179
Target Start/End: Complemental strand, 8286999 - 8286932
Alignment:
Q  112 gattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagcc 179  Q
    ||||| |||||||||||||||||||||||||  | || |||||||| |||||||||| ||||||||||    
T  8286999 gattattaacttcagagacgaaaattcaaatggcttatatttgcagggacgaaagacctatttaagcc 8286932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 112 - 179
Target Start/End: Original strand, 8287250 - 8287317
Alignment:
Q  112 gattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagcc 179  Q
    ||||| ||||||||| |||||||||||||||  |||| |||||||| |||||||||| ||||||||||    
T  8287250 gattagtaacttcagggacgaaaattcaaatggcctatatttgcagggacgaaagacctatttaagcc 8287317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 112 - 179
Target Start/End: Complemental strand, 20086504 - 20086437
Alignment:
Q  112 gattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagcc 179  Q
    ||||| ||||||||| ||||||||||||||| ||||| ||||  ||||||||||||| ||||||||||    
T  20086504 gattagtaacttcagggacgaaaattcaaatgacctatatttatagagacgaaagacatatttaagcc 20086437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 120 - 179
Target Start/End: Complemental strand, 35730721 - 35730662
Alignment:
Q  120 acttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagcc 179  Q
    ||||||||||||||||||||||| || || |||||||| |||||||||| ||||||||||    
T  35730721 acttcagagacgaaaattcaaatgacttatatttgcagggacgaaagacctatttaagcc 35730662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 112 - 179
Target Start/End: Original strand, 53559704 - 53559771
Alignment:
Q  112 gattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagcc 179  Q
    ||||| ||||||||| |||||||||||||||  |||| |||||||| |||||||||| ||||||||||    
T  53559704 gattagtaacttcagggacgaaaattcaaatggcctatatttgcagggacgaaagacatatttaagcc 53559771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 112 - 181
Target Start/End: Complemental strand, 19740927 - 19740858
Alignment:
Q  112 gattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagccaa 181  Q
    ||||| ||||||||| ||||||||||||||| || || |||||||  |||||||||| ||||||||||||    
T  19740927 gattagtaacttcagggacgaaaattcaaatgacatatatttgcaaggacgaaagacctatttaagccaa 19740858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 111 - 180
Target Start/End: Original strand, 19916972 - 19917041
Alignment:
Q  111 tgattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagcca 180  Q
    |||||| |||||||| ||||||||||| |||| ||||| |||||||| ||||||| || |||||||||||    
T  19916972 tgattagtaacttcaaagacgaaaatttaaatgacctatatttgcagggacgaaaaacctatttaagcca 19917041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 112 - 177
Target Start/End: Original strand, 54961748 - 54961813
Alignment:
Q  112 gattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaag 177  Q
    ||||| ||||||||| ||| ||||||||||| ||||| |||||||| |||||||||| ||||||||    
T  54961748 gattagtaacttcagggactaaaattcaaatgacctatatttgcagggacgaaagacatatttaag 54961813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 112 - 180
Target Start/End: Complemental strand, 12691473 - 12691405
Alignment:
Q  112 gattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagcca 180  Q
    ||||| ||||||||| |||||||||||||||  |||| |||||||  |||||||||| |||||||||||    
T  12691473 gattagtaacttcagggacgaaaattcaaatggcctatatttgcatggacgaaagacctatttaagcca 12691405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 112 - 176
Target Start/End: Original strand, 12691722 - 12691786
Alignment:
Q  112 gattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaa 176  Q
    ||||| ||||||||| ||| ||||||||||| ||||| |||||||| |||||||||| |||||||    
T  12691722 gattagtaacttcagggacaaaaattcaaatgacctatatttgcagggacgaaagacatatttaa 12691786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 113 - 181
Target Start/End: Original strand, 13872387 - 13872455
Alignment:
Q  113 attaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagccaa 181  Q
    |||| ||||||||| ||| ||||||||||||  ||| |||||||| |||||||||| ||||||||||||    
T  13872387 attagtaacttcagggacaaaaattcaaatagactatatttgcagggacgaaagacatatttaagccaa 13872455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 112 - 168
Target Start/End: Original strand, 35730978 - 35731034
Alignment:
Q  112 gattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagac 168  Q
    ||||| ||||||||| ||||||||||||||| ||||| |||||||| ||||||||||    
T  35730978 gattagtaacttcagggacgaaaattcaaatgacctatatttgcagggacgaaagac 35731034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 112 - 179
Target Start/End: Original strand, 33294460 - 33294527
Alignment:
Q  112 gattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagcc 179  Q
    ||||| ||||||||| |||||||||||||||  |||| |||||||| || ||||||| ||||||||||    
T  33294460 gattagtaacttcagggacgaaaattcaaattgcctatatttgcagggaggaaagacatatttaagcc 33294527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 112 - 175
Target Start/End: Complemental strand, 34238537 - 34238474
Alignment:
Q  112 gattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtattta 175  Q
    ||||| |||||||||||||||||||||||||| |||| |||| ||  |||||||||| ||||||    
T  34238537 gattagtaacttcagagacgaaaattcaaatagcctatatttacaaggacgaaagacctattta 34238474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 112 - 179
Target Start/End: Complemental strand, 54961498 - 54961431
Alignment:
Q  112 gattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagcc 179  Q
    ||||| ||||||||| |||||||||||||||   ||| |||||||| |||||||||| ||||||||||    
T  54961498 gattagtaacttcagggacgaaaattcaaatggtctatatttgcagggacgaaagacctatttaagcc 54961431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 113 - 179
Target Start/End: Original strand, 22250051 - 22250117
Alignment:
Q  113 attaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagcc 179  Q
    |||| ||| ||||| |||||||||||||||  |||| |||||||| |||||||||| ||||||||||    
T  22250051 attagtaatttcagggacgaaaattcaaatggcctatatttgcagggacgaaagacatatttaagcc 22250117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 113 - 181
Target Start/End: Original strand, 37732397 - 37732465
Alignment:
Q  113 attaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagccaa 181  Q
    |||| |||||||||  |||||||||||||||||||| |||| ||| |||| || || ||||||||||||    
T  37732397 attagtaacttcaggaacgaaaattcaaataacctatatttacagggacgtaaaacctatttaagccaa 37732465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 112 - 179
Target Start/End: Complemental strand, 22249800 - 22249733
Alignment:
Q  112 gattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagcc 179  Q
    ||||| ||||||||  ||||||||||||||| | ||| |||||||| ||||||| || ||||||||||    
T  22249800 gattagtaacttcatggacgaaaattcaaatgatctatatttgcagggacgaaaaacatatttaagcc 22249733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 118 - 177
Target Start/End: Complemental strand, 47980746 - 47980687
Alignment:
Q  118 taacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaag 177  Q
    ||||||||| |||||||||||||||   ||| |||||||| |||||||||| ||||||||    
T  47980746 taacttcagggacgaaaattcaaatggtctatatttgcagggacgaaagacctatttaag 47980687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 112 - 179
Target Start/End: Original strand, 50246175 - 50246242
Alignment:
Q  112 gattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagcc 179  Q
    ||||| ||||||||  ||||||||||||||| ||||| |||||||| || ||||||  ||||||||||    
T  50246175 gattagtaacttcatggacgaaaattcaaatgacctatatttgcagggatgaaagatctatttaagcc 50246242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 112 - 178
Target Start/End: Complemental strand, 32846429 - 32846363
Alignment:
Q  112 gattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagc 178  Q
    |||||||||||||||  ||||||||||||||  |||| |||||||   ||||||||| |||||||||    
T  32846429 gattaataacttcaggaacgaaaattcaaatggcctatatttgcaagcacgaaagacctatttaagc 32846363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 53
Target Start/End: Complemental strand, 48507782 - 48507740
Alignment:
Q  11 tccctccaaatataggtcatttgaattttcgcctctaaagtta 53  Q
    ||||| ||||||||||||||||||||||||| |||| ||||||    
T  48507782 tccctacaaatataggtcatttgaattttcgtctctgaagtta 48507740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 112 - 177
Target Start/End: Complemental strand, 37732364 - 37732299
Alignment:
Q  112 gattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaag 177  Q
    ||||| |||||||| | |||||||||||||| || || |||||||| || ||||||| ||||||||    
T  37732364 gattagtaacttcaaaaacgaaaattcaaatgacatatatttgcagggatgaaagacctatttaag 37732299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 10 - 54
Target Start/End: Original strand, 26601287 - 26601331
Alignment:
Q  10 atccctccaaatataggtcatttgaattttcgcctctaaagttat 54  Q
    |||||| |||||||| |||||||||||||||| |||| |||||||    
T  26601287 atccctacaaatataagtcatttgaattttcgtctctgaagttat 26601331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 122; Significance: 1e-62; HSPs: 67)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 10 - 243
Target Start/End: Complemental strand, 24701635 - 24701398
Alignment:
Q  10 atccctccaaatataggtcatttgaattttcgcctctaaagtta----tcctttcattttgctattgtaaatattaatcatttaaaaaatggtcctaatt 105  Q
    |||||| |||||||| | |||||||||||||| | || ||||||    ||||| |||||||| |||  ||||||||| ||||| ||||||||||||||||    
T  24701635 atccctgcaaatataagccatttgaattttcgtccctgaagttactaatccttccattttgccattacaaatattaaccatttgaaaaatggtcctaatt 24701536  T
Q  106 acatctgattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagccaaccacctcactcaatcatcacttgc 205  Q
    |||| |||||||||||||||| ||||||||||||||| ||||| |||||||| |||||||||  ||||||||||||||||||| | ||||||||||||||    
T  24701535 acat-tgattaataacttcagggacgaaaattcaaatgacctatatttgcagggacgaaagagctatttaagccaaccacctcgcccaatcatcacttgc 24701437  T
Q  206 cacat-ggcaccacgtcgctaatgacaacccacctcagc 243  Q
    ||||| ||||||||||||||||||||| |||||||||||    
T  24701436 cacatgggcaccacgtcgctaatgacagcccacctcagc 24701398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 18 - 243
Target Start/End: Complemental strand, 46545089 - 46544859
Alignment:
Q  18 aaatataggtcatttgaattttcgcctctaaagtta----tcctttcattttgctattgtaaatattaatcatttaaaaaatggtcctaattacatctga 113  Q
    |||||||||||||||||| ||||| | || ||||||    ||||| |||||||| | || ||||||||||||||| |||||| ||||||||| |||||||    
T  46545089 aaatataggtcatttgaagtttcgtccctgaagttactaatccttccattttgccactgcaaatattaatcatttgaaaaatagtcctaattgcatctga 46544990  T
Q  114 ttaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagccaaccacctcactcaatcatcacttgccacat-gg 212  Q
    ||| |||||| |  |||||||||||||||||| || |||||||| |||||||||  ||||||||||||||||||| ||||||||||||||||||||| ||    
T  46544989 ttagtaactttatggacgaaaattcaaataacatatatttgcagggacgaaagatctatttaagccaaccacctcgctcaatcatcacttgccacatggg 46544890  T
Q  213 caccacgtcgctaatgacaacccacctcagc 243  Q
    ||||| ||||||||||||| |||||||||||    
T  46544889 caccatgtcgctaatgacagcccacctcagc 46544859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 60 - 243
Target Start/End: Complemental strand, 30830443 - 30830259
Alignment:
Q  60 cattttgctattgtaaatattaatcatttaaaaaatggtcctaattacatctgattaataacttcagagacgaaaattcaaataacctaaatttgcagag 159  Q
    |||||||| |||| ||||||||||||||| ||| ||||||||||||||||||||||| |||||| || ||||||||||||||| || || |||||||| |    
T  30830443 cattttgccattgcaaatattaatcatttgaaatatggtcctaattacatctgattagtaactttagggacgaaaattcaaatgacttatatttgcaggg 30830344  T
Q  160 acgaaagacgtatttaagccaaccacctcactcaatcatcacttgccacat-ggcaccacgtcgctaatgacaacccacctcagc 243  Q
    ||||||||| ||||||||||||||||||| | ||||||||||||||||||| ||||||||||||||||||||| |||||| ||||    
T  30830343 acgaaagacttatttaagccaaccacctcgcccaatcatcacttgccacatgggcaccacgtcgctaatgacagcccaccccagc 30830259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 11 - 243
Target Start/End: Original strand, 6056395 - 6056632
Alignment:
Q  11 tccctccaaatataggtcatttgaattttcgcctctaaagtta----tcctttcattttgctattgtaaatattaatcatttaaaaaatggtcctaatta 106  Q
    ||||| ||||||||||||||||||||||||| | ||||| |||    ||||| || | ||    || ||||||||||||||| |    ||||||||||||    
T  6056395 tccctgcaaatataggtcatttgaattttcgtccctaaaattactgatccttccaatatgtccctgcaaatattaatcatttgacttttggtcctaatta 6056494  T
Q  107 catctgattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagccaaccacctcactcaatcatcacttgcc 206  Q
    |||||||||| ||||||||| ||||||||||||||| ||||| |||||||| || ||||||| ||||||||| ||||||||||||||||||||||||| |    
T  6056495 catctgattagtaacttcagggacgaaaattcaaatgacctatatttgcagggatgaaagacttatttaagcaaaccacctcactcaatcatcacttgtc 6056594  T
Q  207 acat-ggcaccacgtcgctaatgacaacccacctcagc 243  Q
    |||| ||||||||||||||||||||| |||||||||||    
T  6056595 acatgggcaccacgtcgctaatgacagcccacctcagc 6056632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 20 - 243
Target Start/End: Complemental strand, 10019729 - 10019501
Alignment:
Q  20 atataggtcatttgaattttcgcctctaaagtta----tcctttcattttgctattgtaaatattaatcatttaaaaaatggtcctaattacatctgatt 115  Q
    |||||||||||||||||||||  | || ||||||    ||||| |||||||| |||| ||||||||||||||| |||||||||| ||||||||| |||||    
T  10019729 atataggtcatttgaattttcatccctgaagttactaatccttccattttgccattgcaaatattaatcatttgaaaaatggtcataattacatttgatt 10019630  T
Q  116 aataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagccaaccacctcactcaatcatcacttgccacat-ggca 214  Q
    |  |||||||| ||||||||||||||| || || |||||||| ||||||| || ||||||||||||||| ||| | |||||||   ||||||||| ||||    
T  10019629 agcaacttcagggacgaaaattcaaatgacttatatttgcagggacgaaatacctatttaagccaaccatctcgcccaatcatattttgccacatgggca 10019530  T
Q  215 ccacgtcgctaatgacaacccacctcagc 243  Q
    ||||||||||||||||| |||||||||||    
T  10019529 ccacgtcgctaatgacagcccacctcagc 10019501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 11 - 243
Target Start/End: Complemental strand, 46850023 - 46849786
Alignment:
Q  11 tccctccaaatataggtcatttgaattttcgcctctaaagtta----tcctttcattttgctattgtaaatattaatcatttaaaaaatggtcctaatta 106  Q
    ||||| ||||||||||||||||||||||||| | || ||||||    ||||| || |||||   || ||||||||||||||| |    ||||||||||||    
T  46850023 tccctgcaaatataggtcatttgaattttcgtccctgaagttactgatccttccaatttgcccctgcaaatattaatcatttgacttttggtcctaatta 46849924  T
Q  107 catctgattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagccaaccacctcactcaatcatcacttgcc 206  Q
    |||||||||| ||||||||| ||||||||||||||| || || |||||||  || ||||||| ||||||||| |||||| || |||||||||||||||||    
T  46849923 catctgattagtaacttcagggacgaaaattcaaatgacatatatttgcaaggatgaaagacctatttaagcaaaccacatcgctcaatcatcacttgcc 46849824  T
Q  207 acat-ggcaccacgtcgctaatgacaacccacctcagc 243  Q
    |||| ||||||||||||||||||| | |||||||||||    
T  46849823 acatgggcaccacgtcgctaatgatagcccacctcagc 46849786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 65 - 243
Target Start/End: Complemental strand, 26953408 - 26953229
Alignment:
Q  65 tgctattgtaaatattaatcatttaaaaaatggtcctaattacatctgattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaa 164  Q
    |||| ||| ||||||||||||||| |    |||||||||||||||||||||| ||||||||||||||||||||||||| ||||| |||||||| || |||    
T  26953408 tgctcttgcaaatattaatcatttgacttttggtcctaattacatctgattagtaacttcagagacgaaaattcaaatgacctatatttgcagggatgaa 26953309  T
Q  165 agacgtatttaagccaaccacctcactcaatcatcacttgccacat-ggcaccacgtcgctaatgacaacccacctcagc 243  Q
    |||| ||||||| | ||||||||| | ||||||||||||||||||| ||||||||||||||||||||| |||| ||||||    
T  26953308 agacctatttaaacaaaccacctcgcccaatcatcacttgccacatgggcaccacgtcgctaatgacagcccagctcagc 26953229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 11 - 241
Target Start/End: Complemental strand, 33347781 - 33347546
Alignment:
Q  11 tccctccaaatataggtcatttgaattttcgcctctaaagtta----tcctttcattttgctattgtaaatattaatcatttaaaaaatggtcctaatta 106  Q
    ||||| ||||||||||||||||||||||||| |  | ||||||    ||||| || | |||  ||| ||||||||||||||| |    ||||||||||||    
T  33347781 tccctgcaaatataggtcatttgaattttcgtccttgaagttactaatccttccaatctgcccttgcaaatattaatcatttgacttttggtcctaatta 33347682  T
Q  107 catctgattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagccaaccacctcactcaatcatcacttgcc 206  Q
    ||||||| || ||||||||| ||||||||||||||| ||||| |||||||| || ||||||| ||||||||| ||||||||| | |||||||||||||||    
T  33347681 catctgactagtaacttcagggacgaaaattcaaatgacctatatttgcagggatgaaagacctatttaagcaaaccacctcgcccaatcatcacttgcc 33347582  T
Q  207 acat-ggcaccacgtcgctaatgacaacccacctca 241  Q
    |||| |||||||| |||||||||||| |||||||||    
T  33347581 acatgggcaccacatcgctaatgacagcccacctca 33347546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 74 - 242
Target Start/End: Complemental strand, 51934072 - 51933903
Alignment:
Q  74 aaatattaatcatttaaaaaatggtcctaattacatctgattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatt 173  Q
    ||||||||||||||| ||||||||||||||||||||||||| | ||  ||||  ||||||||||||||| || || |||| ||| |||||||||| | ||    
T  51934072 aaatattaatcatttgaaaaatggtcctaattacatctgatcagtagtttcaaggacgaaaattcaaatgacatatatttccagggacgaaagacctgtt 51933973  T
Q  174 taagccaaccacctcactcaatcatcacttgccacatgg-caccacgtcgctaatgacaacccacctcag 242  Q
    ||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||| |||| |||||    
T  51933972 taagccaaccacctcacccaatcatcacttgccacatggacaccacgtcgctaatgacatcccaactcag 51933903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 53 - 243
Target Start/End: Complemental strand, 35312295 - 35312104
Alignment:
Q  53 atcctttcattttgctattgtaaatattaatcatttaaaaaatggtcctaattacatctgattaataacttcagagacgaaaattcaaataacctaaatt 152  Q
    |||||| |||||||  |||| ||||||||||||||| |||||||||| ||||||||| |||||| ||||||||  ||| |||||||||||   ||| |||    
T  35312295 atccttccattttgtcattgcaaatattaatcatttgaaaaatggtcttaattacatttgattagtaacttcatcgacaaaaattcaaatggtctatatt 35312196  T
Q  153 tgcagagacgaaagacgtatttaagccaaccacctcactcaatcatcacttgccacat-ggcaccacgtcgctaatgacaacccacctcagc 243  Q
    ||||| |||||||||| ||||||| ||||||||| |   ||||||||||||||||||| ||||||| |||||||||||||||||||||||||    
T  35312195 tgcagggacgaaagacctatttaaaccaaccaccccgtccaatcatcacttgccacatgggcaccatgtcgctaatgacaacccacctcagc 35312104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 74 - 280
Target Start/End: Complemental strand, 12577310 - 12577103
Alignment:
Q  74 aaatattaatcatttaaaaaatggtcctaattacatctgattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatt 173  Q
    ||||||||||||||| |    |||||||||||||||||||||| ||||||||| ||||||||||||||| ||||| |||||||| || ||||||| | ||    
T  12577310 aaatattaatcatttgacttttggtcctaattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcagggatgaaagacctgtt 12577211  T
Q  174 taagccaaccacctcactcaatcatcacttgccacat-ggcaccacgtcgctaatgacaacccacctcagcnnnnnnnctctaattatgaccaaaaagtc 272  Q
    ||||| ||||||||| | ||||||||||||||||||| ||||| ||||||||||||||| | |||||||||         ||||||| ||||||||||||    
T  12577210 taagcaaaccacctcgcccaatcatcacttgccacatgggcactacgtcgctaatgacagctcacctcagcaaaaaaaacctaattaggaccaaaaagtc 12577111  T
Q  273 aaatgatt 280  Q
    ||||||||    
T  12577110 aaatgatt 12577103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 11 - 241
Target Start/End: Complemental strand, 49003240 - 49003005
Alignment:
Q  11 tccctccaaatataggtcatttgaattttcgcctctaaagtta----tcctttcattttgctattgtaaatattaatcatttaaaaaatggtcctaatta 106  Q
    ||||| ||||||||||||||||||||||||| |  | ||||||    ||||| || | |||   || ||||||||||||||| |    ||||||||||||    
T  49003240 tccctgcaaatataggtcatttgaattttcgtccatgaagttactaatccttccaatctgcctctgcaaatattaatcatttgatttttggtcctaatta 49003141  T
Q  107 catctgattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagccaaccacctcactcaatcatcacttgcc 206  Q
    |||||||||| ||||||||| |||| |||||||||| ||||| |||||||| || ||||||| ||||||||  ||||||||| | |||||||||||||||    
T  49003140 catctgattagtaacttcagggacggaaattcaaatgacctatatttgcagggatgaaagacttatttaagaaaaccacctcgcccaatcatcacttgcc 49003041  T
Q  207 acat-ggcaccacgtcgctaatgacaacccacctca 241  Q
    |||| ||||||||||||||||||||| |||||||||    
T  49003040 acatgggcaccacgtcgctaatgacagcccacctca 49003005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 6 - 243
Target Start/End: Complemental strand, 5183876 - 5183634
Alignment:
Q  6 ttttatccctccaaatataggtcatttgaattttcgcctctaaagtta----tcctttcattttgctattgtaaatattaatcatttaaaaaatggtcct 101  Q
    |||| ||||| |||||||||| |||||||||||||| | || ||||||    ||||| || |||||   || ||||||||||||||| |    |||||||    
T  5183876 ttttgtccctgcaaatataggccatttgaattttcgtccctgaagttacgaatccttccaatttgcccctgcaaatattaatcatttgacttttggtcct 5183777  T
Q  102 aattacatctgattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagccaaccacctcactcaatcatcac 201  Q
    |||||||| |||||| ||||||||  ||||||||||||||| ||||| ||||| || || ||||||| ||||||||| ||||||||| | ||||||||||    
T  5183776 aattacatatgattagtaacttcatggacgaaaattcaaatgacctatatttgtagggatgaaagacctatttaagcaaaccacctcgcccaatcatcac 5183677  T
Q  202 ttgccacatg-gcaccacgtcgctaatgacaacccacctcagc 243  Q
    |||||||||| |||||||||||||||||| | |||||||||||    
T  5183676 ttgccacatgtgcaccacgtcgctaatgatagcccacctcagc 5183634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 95 - 243
Target Start/End: Complemental strand, 25415121 - 25414972
Alignment:
Q  95 tggtcctaattacatctgattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagccaaccacctcactcaa 194  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||| ||||| |||||||  || ||||||| ||||||||| || |||||| | |||    
T  25415121 tggtcctaattacatctgattagtaacttcagagacgaaaattcaaatgacctatatttgcatggatgaaagacctatttaagcaaatcacctcgcccaa 25415022  T
Q  195 tcatcacttgccacat-ggcaccacgtcgctaatgacaacccacctcagc 243  Q
    |||||||||| ||||| ||||||||||||||||||||||| |||||||||    
T  25415021 tcatcacttgtcacatgggcaccacgtcgctaatgacaactcacctcagc 25414972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 77 - 241
Target Start/End: Complemental strand, 52455050 - 52454885
Alignment:
Q  77 tattaatcatttaaaaaatggtcctaattacatctgattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaa 176  Q
    |||||||||||| |||||||||| |||||||||||||||| |||||| || || |||||||||||| |||||  ||||||| ||||||| || |||||||    
T  52455050 tattaatcatttgaaaaatggtcataattacatctgattagtaactttagggatgaaaattcaaatgacctatttttgcagggacgaaatacctatttaa 52454951  T
Q  177 gccaaccacctcactcaatcatcacttgccacat-ggcaccacgtcgctaatgacaacccacctca 241  Q
    |||||| |||||| |||||||||| ||| ||||| ||||||||||| |||||||||||||||||||    
T  52454950 gccaactacctcattcaatcatcatttgtcacatgggcaccacgtcactaatgacaacccacctca 52454885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 18 - 239
Target Start/End: Original strand, 48380707 - 48380933
Alignment:
Q  18 aaatataggtcatttgaattttcgcctctaaagtta----tcctttcattttgctattgtaaatattaatcatttaaaaaatggtcctaattacatctga 113  Q
    |||||||||||||||||||||||| | || ||||||    ||||| || | ||| | || ||| ||||||||||| ||||||||||||||||||||||||    
T  48380707 aaatataggtcatttgaattttcgtcgctgaagttactaatccttccaatctgccagtgcaaaaattaatcatttgaaaaatggtcctaattacatctga 48380806  T
Q  114 ttaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagccaaccacctcactcaatcatcacttgccacatgg- 212  Q
    ||| |||||||   ||||||| ||||||| |  || |||||  | ||| ||| || |||||||| ||||||||||  ||||||||||||||||||||||     
T  48380807 ttagtaacttcgtggacgaaatttcaaatgatatatatttgtggggacaaaaaacatatttaagtcaaccacctcgttcaatcatcacttgccacatgga 48380906  T
Q  213 caccacgtcgctaatgacaacccacct 239  Q
    |||||||||||||||||||||||||||    
T  48380907 caccacgtcgctaatgacaacccacct 48380933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 11 - 243
Target Start/End: Complemental strand, 2953829 - 2953592
Alignment:
Q  11 tccctccaaatataggtcatttgaattttcgcctctaaagtta----tcctttcattttgctattgtaaatattaatcatttaaaaaatggtcctaatta 106  Q
    ||||| ||||||||||||||||||||||||| | || ||||||    ||||| || | |||   || ||||||||||||||| |    ||||||||||||    
T  2953829 tccctgcaaatataggtcatttgaattttcgtccctgaagttactaatccttccaatctgcccctgcaaatattaatcatttgatttttggtcctaatta 2953730  T
Q  107 catctgattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagccaaccacctcactcaatcatcacttgcc 206  Q
    ||| |||||| ||||||||  ||||||||||||||| || || ||||| || || ||||||| ||||||||| ||||||||| | |||||||||||||||    
T  2953729 catatgattagtaacttcaaggacgaaaattcaaatgacttatatttgtagggatgaaagacctatttaagcaaaccacctcgcccaatcatcacttgcc 2953630  T
Q  207 acatg-gcaccacgtcgctaatgacaacccacctcagc 243  Q
    ||||| ||||||||||| |||||||| |||||||||||    
T  2953629 acatgtgcaccacgtcgttaatgacagcccacctcagc 2953592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 11 - 243
Target Start/End: Complemental strand, 37152903 - 37152666
Alignment:
Q  11 tccctccaaatataggtcatttgaattttcgcctctaaagtta----tcctttcattttgctattgtaaatattaatcatttaaaaaatggtcctaatta 106  Q
    ||||| |||||||||  |||||||||||||| |||| ||||||    ||||| || | |||   || ||||||||||||||| |    | ||||||||||    
T  37152903 tccctgcaaatatagtccatttgaattttcgtctctgaagttactaatccttccaatctgcccctgcaaatattaatcatttgacttttagtcctaatta 37152804  T
Q  107 catctgattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagccaaccacctcactcaatcatcacttgcc 206  Q
    |||||||||| ||||||||  ||||||||||||||| || || |||||||  || ||||||| |||||||||||||||  |||| |||||||||||||||    
T  37152803 catctgattagtaacttcaaggacgaaaattcaaatgacttatatttgcatggatgaaagacctatttaagccaaccagttcacccaatcatcacttgcc 37152704  T
Q  207 acat-ggcaccacgtcgctaatgacaacccacctcagc 243  Q
    |||| ||||||||||||||||||||| |||||||||||    
T  37152703 acatgggcaccacgtcgctaatgacagcccacctcagc 37152666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 74 - 243
Target Start/End: Original strand, 739305 - 739474
Alignment:
Q  74 aaatattaatcatttaaaaaatggtcctaattacatctgattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatt 173  Q
    ||||||||||||||| |    |||||||||||||||||||||| |||||||||  |||||||||||||| ||||| | |||||| || ||||||| ||||    
T  739305 aaatattaatcatttgacttttggtcctaattacatctgattagtaacttcaggaacgaaaattcaaatgacctata-ttgcagggatgaaagacctatt 739403  T
Q  174 taagccaaccacctcactcaatcatcacttgccacat-ggcaccacgtcgctaatgacaacccacctcagc 243  Q
    ||||| ||||||||| | ||||||||||||||||||| ||||||||||||||||||||| | |||||||||    
T  739404 taagcaaaccacctcgcccaatcatcacttgccacatgggcaccacgtcgctaatgacagctcacctcagc 739474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 74 - 242
Target Start/End: Complemental strand, 8890507 - 8890338
Alignment:
Q  74 aaatattaatcatttaaaaaatggtcctaattacatctgattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatt 173  Q
    ||||||||||||||| ||||||| |  ||||||||||| |||| ||||||||  ||||||||||||||| ||||| ||||| || || |||| || ||||    
T  8890507 aaatattaatcatttgaaaaatgattttaattacatctcattagtaacttcatggacgaaaattcaaatgacctatatttgaagggaagaaatacctatt 8890408  T
Q  174 taagccaaccacctcactcaatcatcacttgccacat-ggcaccacgtcgctaatgacaacccacctcag 242  Q
    ||||| |||||||||   ||||||||||||||||||| |||||||| |||||||||||||||||||||||    
T  8890407 taagcgaaccacctcgtccaatcatcacttgccacatgggcaccacatcgctaatgacaacccacctcag 8890338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 74 - 243
Target Start/End: Original strand, 1047290 - 1047460
Alignment:
Q  74 aaatattaatcatttaaaaaatggtcctaattacatctgattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatt 173  Q
    ||||||||||||||| |    ||||||||||||||| |||||| ||||||||| ||||||||||||||| ||||| ||||| || || |||| |   |||    
T  1047290 aaatattaatcatttgacttttggtcctaattacatatgattagtaacttcagggacgaaaattcaaatgacctatatttgtagggatgaaatatccatt 1047389  T
Q  174 taagccaaccacctcactcaatcatcacttgccacatg-gcaccacgtcgctaatgacaacccacctcagc 243  Q
    ||||| ||||||||| | ||||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  1047390 taagcgaaccacctcgcccaatcatcacttgccacatgtacaccacgtcgctaatgacaacccacctcagc 1047460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 74 - 243
Target Start/End: Complemental strand, 19755703 - 19755533
Alignment:
Q  74 aaatattaatcatttaaaaaatggtcctaattacatctgattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatt 173  Q
    ||||||||||||||| |    |||||||||||| ||||||||| ||||||||| ||||||||||||||| ||||| ||||| || || ||||||| ||||    
T  19755703 aaatattaatcatttgacttttggtcctaattatatctgattagtaacttcagggacgaaaattcaaatgacctatatttgtagggatgaaagacctatt 19755604  T
Q  174 taagccaaccacctcactcaatcatcacttgccacat-ggcaccacgtcgctaatgacaacccacctcagc 243  Q
    ||||| |||||| || | |||||||||||| |||||| ||||||||||| ||||||||||||||| |||||    
T  19755603 taagcaaaccacttcgcccaatcatcacttaccacatgggcaccacgtcactaatgacaacccacgtcagc 19755533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 17 - 243
Target Start/End: Complemental strand, 29980997 - 29980766
Alignment:
Q  17 caaatataggtcatttgaattttcgcctctaaagtta----tcctttcattttgctattgtaaatattaatcatttaaaaaatggtcctaattacatctg 112  Q
    ||||||||||||||||||||||||| | |  ||||||    ||||| || |||||   || ||||||||||||||| |    |||||||||||||||||     
T  29980997 caaatataggtcatttgaattttcgtcccggaagttactaatccttccaatttgcccctgcaaatattaatcatttgatttttggtcctaattacatctt 29980898  T
Q  113 attaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagccaaccacctcactcaatcatcacttgccacat-g 211  Q
    |||| |||||| || ||||||||||||||| ||||| |||||||| || ||||||| ||||||||| |||| ||||   ||||||||||||||||||| |    
T  29980897 attagtaactttagggacgaaaattcaaatgacctatatttgcagggatgaaagacctatttaagcaaaccgcctcgtccaatcatcacttgccacatgg 29980798  T
Q  212 gcaccacgtcgctaatgacaacccacctcagc 243  Q
    ||||||||| || ||||||| |||||||||||    
T  29980797 gcaccacgttgcaaatgacagcccacctcagc 29980766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 98 - 231
Target Start/End: Complemental strand, 46364849 - 46364715
Alignment:
Q  98 tcctaattacatctgattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagccaaccacctcactcaatca 197  Q
    ||||||||||||||||||| ||||||||| ||||||||||||||| ||||| |||||||| || ||||||| ||||||||| ||||||||  | ||||||    
T  46364849 tcctaattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcagggatgaaagacctatttaagcaaaccaccttgcccaatca 46364750  T
Q  198 tcacttgccacat-ggcaccacgtcgctaatgaca 231  Q
    ||||||||||||| || ||||||||||||||||||    
T  46364749 tcacttgccacatggggaccacgtcgctaatgaca 46364715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 74 - 243
Target Start/End: Original strand, 29042841 - 29043011
Alignment:
Q  74 aaatattaatcatttaaaaaatggtcctaattacatctgattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatt 173  Q
    ||||||||||||||| |    ||||| |||||||||||||||| ||||||||| || |||||||||||| ||||| |||||||  || ||||||| ||||    
T  29042841 aaatattaatcatttgatttttggtcataattacatctgattagtaacttcagggatgaaaattcaaatgacctatatttgcaaggatgaaagacctatt 29042940  T
Q  174 taagccaaccacctcactcaatcatcacttgccacat-ggcaccacgtcgctaatgacaacccacctcagc 243  Q
    ||||| ||||||||  | ||||||||||||||||||| |||||||||||||||||||   |||||||||||    
T  29042941 taagcaaaccaccttgcccaatcatcacttgccacatgggcaccacgtcgctaatgatggcccacctcagc 29043011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 6 - 229
Target Start/End: Original strand, 33030348 - 33030576
Alignment:
Q  6 ttttatccctccaaatataggtcatttgaattttcgcctctaaagtta----tcctttcattttgctattgtaaatattaatcatttaaaaaatggtcct 101  Q
    |||| ||||| ||||||||||||||||||||||||| | || ||||||    | ||| || | ||| | || |||||| |||||||| ||||||| ||||    
T  33030348 ttttgtccctgcaaatataggtcatttgaattttcgtccctgaagttactaattcttccaatctgccactgcaaatatgaatcatttgaaaaatgatcct 33030447  T
Q  102 aattacatctgattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagccaaccac-ctcactcaatcatca 200  Q
    ||||||||||||||| |||||||||| |||||||||||||| | ||| |||||||| ||||||| || |||||||| ||||||| ||  | |||||||||    
T  33030448 aattacatctgattagtaacttcagaaacgaaaattcaaatgatctatatttgcagggacgaaaaacctatttaagtcaaccactctgtc-caatcatca 33030546  T
Q  201 cttgccacat-ggcaccacgtcgctaatga 229  Q
    ||| |||||| ||||||| || ||||||||    
T  33030547 cttaccacatgggcaccaagttgctaatga 33030576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 74 - 243
Target Start/End: Complemental strand, 34176222 - 34176051
Alignment:
Q  74 aaatattaatcatttaaaaaatggtcctaattacatct-gattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtat 172  Q
    |||||||||| |||| | ||||| || ||||||||| | | |||| |||||||  ||||||||||||||| || || |||||||| |||||||||| |||    
T  34176222 aaatattaattatttgagaaatgatcataattacattttggttaacaacttcaaggacgaaaattcaaatgacttatatttgcagggacgaaagacctat 34176123  T
Q  173 ttaagccaaccacctcactcaatcatcacttgccacat-ggcaccacgtcgctaatgacaacccacctcagc 243  Q
    |||| ||||||| ||| | ||||||||||||||||||| |||||||||||||||||||||  ||||||||||    
T  34176122 ttaaaccaaccatctcgcccaatcatcacttgccacatgggcaccacgtcgctaatgacagtccacctcagc 34176051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 74 - 227
Target Start/End: Original strand, 49989881 - 49990033
Alignment:
Q  74 aaatattaatcatttaaaaaatggtcctaattacatctgattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatt 173  Q
    ||||||||||||||| |    |||||||||||||||||||||||||||||||| || | | |||||||| ||||| |||||| | || ||||||| ||||    
T  49989881 aaatattaatcatttgacttttggtcctaattacatctgattaataacttcagggatg-agattcaaatgacctatatttgccg-gatgaaagacctatt 49989978  T
Q  174 taagccaaccacctcactcaatcatcacttgccacat-ggcaccacgtcgctaat 227  Q
    ||||| ||||||||| | ||||||||||||| ||||| |||||||||||||||||    
T  49989979 taagcaaaccacctcgcccaatcatcacttgtcacatgggcaccacgtcgctaat 49990033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 95 - 241
Target Start/End: Complemental strand, 5926798 - 5926650
Alignment:
Q  95 tggtcctaattacatctgattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtattt-aagccaaccacctcactca 193  Q
    ||||||||||||||| | |||| |||||||||  |||||||||||||  || || |||||||| || |||| || ||||| || | ||||||||||| ||    
T  5926798 tggtcctaattacatttaattagtaacttcaggaacgaaaattcaaacgacttatatttgcagggatgaaatacctattttaaacaaaccacctcaccca 5926699  T
Q  194 atcatcacttgccacat-ggcaccacgtcgctaatgacaacccacctca 241  Q
    ||||||||||||||||| ||||||| ||| ||||| ||| |||||||||    
T  5926698 atcatcacttgccacatgggcaccaggtcactaataacagcccacctca 5926650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 74 - 148
Target Start/End: Original strand, 6334906 - 6334980
Alignment:
Q  74 aaatattaatcatttaaaaaatggtcctaattacatctgattaataacttcagagacgaaaattcaaataaccta 148  Q
    ||||||||||||||| |||| ||||| |||||||||||||||| |||||||| |||||||||||||||| |||||    
T  6334906 aaatattaatcatttgaaaagtggtcataattacatctgattagtaacttcaaagacgaaaattcaaatgaccta 6334980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 112 - 181
Target Start/End: Original strand, 2953781 - 2953850
Alignment:
Q  112 gattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagccaa 181  Q
    ||||| ||||||||| ||||||||||||||| ||||| |||||||| |||||||||| ||||||||||||    
T  2953781 gattagtaacttcagggacgaaaattcaaatgacctatatttgcagggacgaaagacatatttaagccaa 2953850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 112 - 181
Target Start/End: Original strand, 29043072 - 29043141
Alignment:
Q  112 gattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagccaa 181  Q
    ||||| ||||||||| |||||||||||||||  |||| ||||||||||||||||||| ||||||||||||    
T  29043072 gattagtaacttcagggacgaaaattcaaatggcctatatttgcagagacgaaagacatatttaagccaa 29043141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 112 - 181
Target Start/End: Original strand, 49990113 - 49990182
Alignment:
Q  112 gattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagccaa 181  Q
    |||||||||||||| |||||||||||||||||  ||| |||||||| |||||||||| ||||||||||||    
T  49990113 gattaataacttcaaagacgaaaattcaaatagtctatatttgcagggacgaaagacatatttaagccaa 49990182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 112 - 179
Target Start/End: Complemental strand, 24701337 - 24701270
Alignment:
Q  112 gattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagcc 179  Q
    ||||| ||||||||| ||||||||||||||| | ||| ||||||||||||||||||| ||||||||||    
T  24701337 gattagtaacttcagggacgaaaattcaaatgagctatatttgcagagacgaaagacttatttaagcc 24701270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 112 - 179
Target Start/End: Complemental strand, 46364641 - 46364574
Alignment:
Q  112 gattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagcc 179  Q
    ||||| ||||||||| ||||||||||||||| ||||| |||||||| |||||||||| ||||||||||    
T  46364641 gattagtaacttcagggacgaaaattcaaatgacctatatttgcagggacgaaagacatatttaagcc 46364574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 118 - 181
Target Start/End: Original strand, 46849981 - 46850044
Alignment:
Q  118 taacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagccaa 181  Q
    ||||||||| ||||||||||||||| ||||| |||||||| |||||||||| ||||||||||||    
T  46849981 taacttcagggacgaaaattcaaatgacctatatttgcagggacgaaagacctatttaagccaa 46850044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 74 - 154
Target Start/End: Original strand, 1040384 - 1040464
Alignment:
Q  74 aaatattaatcatttaaaaaatggtcctaattacatctgattaataacttcagagacgaaaattcaaataacctaaatttg 154  Q
    ||||||||||||||| |    ||||||||||||||| |||||| ||||||||| ||||||||||||||| ||||| |||||    
T  1040384 aaatattaatcatttgacttttggtcctaattacatatgattagtaacttcagggacgaaaattcaaatgacctatatttg 1040464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 112 - 179
Target Start/End: Original strand, 1047521 - 1047588
Alignment:
Q  112 gattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagcc 179  Q
    ||||| ||||||||||||||||||||||||| ||||| |||| ||| || ||||||| ||||||||||    
T  1047521 gattagtaacttcagagacgaaaattcaaatgacctatatttacagggatgaaagacatatttaagcc 1047588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 118 - 181
Target Start/End: Original strand, 5183829 - 5183892
Alignment:
Q  118 taacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagccaa 181  Q
    ||||||||| |||||||||||||||  |||| |||||||| ||| |||||||||||||||||||    
T  5183829 taacttcagggacgaaaattcaaatggcctatatttgcagggacaaaagacgtatttaagccaa 5183892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 161 - 231
Target Start/End: Complemental strand, 6334867 - 6334796
Alignment:
Q  161 cgaaagacgtatttaagccaaccacctcactcaatcatcacttgccacat-ggcaccacgtcgctaatgaca 231  Q
    ||||| || |||||||||||||||| || ||||||||||||||| ||||| || ||||||||||||||||||    
T  6334867 cgaaatacctatttaagccaaccacatcgctcaatcatcacttgtcacatgggtaccacgtcgctaatgaca 6334796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 112 - 179
Target Start/End: Original strand, 49003192 - 49003259
Alignment:
Q  112 gattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagcc 179  Q
    ||||| ||||||||  ||||||||||||||| ||||| |||||||| |||||||||| ||||||||||    
T  49003192 gattagtaacttcatggacgaaaattcaaatgacctatatttgcagggacgaaagacctatttaagcc 49003259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 112 - 174
Target Start/End: Complemental strand, 5926586 - 5926524
Alignment:
Q  112 gattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtattt 174  Q
    ||||| ||||||||| ||||||||||||||| ||||| |||||||| |||||||||| |||||    
T  5926586 gattagtaacttcagggacgaaaattcaaatgacctatatttgcagggacgaaagacatattt 5926524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 112 - 178
Target Start/End: Original strand, 29980955 - 29981021
Alignment:
Q  112 gattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagc 178  Q
    ||||| ||||||| | ||||||||||||||| ||||| ||||||| ||||||||||| |||||||||    
T  29980955 gattagtaacttccgggacgaaaattcaaatgacctatatttgcaaagacgaaagacctatttaagc 29981021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 113 - 179
Target Start/End: Complemental strand, 33030400 - 33030334
Alignment:
Q  113 attaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagcc 179  Q
    |||| ||||||||| ||||||||||||||| ||||| |||||||| ||| |||||| ||||||||||    
T  33030400 attagtaacttcagggacgaaaattcaaatgacctatatttgcagggacaaaagacctatttaagcc 33030334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 112 - 178
Target Start/End: Original strand, 37152855 - 37152921
Alignment:
Q  112 gattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagc 178  Q
    ||||| |||||||||||||||||||||||||   ||| |||||||| |||||||||| |||||||||    
T  37152855 gattagtaacttcagagacgaaaattcaaatggactatatttgcagggacgaaagacatatttaagc 37152921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 112 - 180
Target Start/End: Complemental strand, 2953531 - 2953463
Alignment:
Q  112 gattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagcca 180  Q
    ||||| |||||| || ||||||||||||||| ||||| |||| ||| |||||||||| |||||||||||    
T  2953531 gattagtaactttagggacgaaaattcaaatgacctatatttacagggacgaaagacatatttaagcca 2953463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 111 - 179
Target Start/End: Complemental strand, 12577078 - 12577010
Alignment:
Q  111 tgattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagcc 179  Q
    |||||| |||||||| ||||||||||||||||  |||| |||| ||| |||||||||| ||||||||||    
T  12577078 tgattagtaacttcatagacgaaaattcaaatggcctatatttacagggacgaaagacatatttaagcc 12577010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 111 - 179
Target Start/End: Complemental strand, 46544828 - 46544760
Alignment:
Q  111 tgattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagcc 179  Q
    |||||| |||||||| |||||||||||||||| ||||| |||||||   ||||||||| ||||||||||    
T  46544828 tgattagtaacttcaaagacgaaaattcaaatgacctatatttgcaataacgaaagacttatttaagcc 46544760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 112 - 176
Target Start/End: Complemental strand, 49002943 - 49002879
Alignment:
Q  112 gattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaa 176  Q
    ||||| ||||||||  ||||||||||||||| ||||| |||||||| |||||||||| |||||||    
T  49002943 gattagtaacttcatggacgaaaattcaaatgacctatatttgcagggacgaaagacatatttaa 49002879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 128 - 179
Target Start/End: Complemental strand, 6056427 - 6056376
Alignment:
Q  128 gacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagcc 179  Q
    ||||||||||||||| ||||| |||||||| |||||||||| ||||||||||    
T  6056427 gacgaaaattcaaatgacctatatttgcagggacgaaagacatatttaagcc 6056376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 112 - 179
Target Start/End: Original strand, 19755722 - 19755789
Alignment:
Q  112 gattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagcc 179  Q
    ||||| ||||||||| ||  ||||||||||| ||||| |||||||| |||||||||| ||||||||||    
T  19755722 gattagtaacttcagggataaaaattcaaatgacctatatttgcagggacgaaagacctatttaagcc 19755789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 112 - 179
Target Start/End: Complemental strand, 25414911 - 25414844
Alignment:
Q  112 gattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagcc 179  Q
    ||||| |||||||||||| ||||||||||||  |||| ||||| || |||||||||| ||||||||||    
T  25414911 gattagtaacttcagagaagaaaattcaaatggcctatatttgtagggacgaaagacatatttaagcc 25414844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 112 - 179
Target Start/End: Complemental strand, 26953168 - 26953101
Alignment:
Q  112 gattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagcc 179  Q
    ||||| ||||||||| ||||||||||||||||  ||| |||||||  |||||||||| ||||||||||    
T  26953168 gattagtaacttcagggacgaaaattcaaatagtctatatttgcaaggacgaaagacatatttaagcc 26953101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 112 - 179
Target Start/End: Original strand, 33347733 - 33347800
Alignment:
Q  112 gattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagcc 179  Q
    ||||| ||||||||  ||||||||||||||| ||||| |||||||| |||||||||| ||| ||||||    
T  33347733 gattagtaacttcaaggacgaaaattcaaatgacctatatttgcagggacgaaagacctatataagcc 33347800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 112 - 179
Target Start/End: Complemental strand, 48380748 - 48380681
Alignment:
Q  112 gattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagcc 179  Q
    ||||| ||||||||| ||||||||||||||| ||||| |||| ||  |||||||||| ||||||||||    
T  48380748 gattagtaacttcagcgacgaaaattcaaatgacctatatttacaaggacgaaagacctatttaagcc 48380681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 112 - 182
Target Start/End: Complemental strand, 34175989 - 34175919
Alignment:
Q  112 gattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagccaac 182  Q
    ||||||||||||||  ||||||||||||||| |||||||||| ||   || |||||| |||||||||||||    
T  34175989 gattaataacttcaatgacgaaaattcaaatgacctaaatttacaagaacaaaagacctatttaagccaac 34175919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 112 - 181
Target Start/End: Original strand, 5926838 - 5926907
Alignment:
Q  112 gattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagccaa 181  Q
    ||||| ||||||||| || ||||||||||||   ||| |||||||| |||||||||| ||||||||||||    
T  5926838 gattagtaacttcagggatgaaaattcaaatggtctatatttgcagggacgaaagacctatttaagccaa 5926907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 111 - 176
Target Start/End: Complemental strand, 35312042 - 35311977
Alignment:
Q  111 tgattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaa 176  Q
    |||||| ||||||||| ||||||||||||||| ||||| ||||  || |||||||||| |||||||    
T  35312042 tgattagtaacttcagtgacgaaaattcaaatgacctatatttatagggacgaaagacctatttaa 35311977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 112 - 179
Target Start/End: Original strand, 739535 - 739602
Alignment:
Q  112 gattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagcc 179  Q
    ||||| ||||||||   |||||||||||||| ||||| ||||||||||||||||  | ||||||||||    
T  739535 gattagtaacttcatgtacgaaaattcaaatgacctatatttgcagagacgaaaatcatatttaagcc 739602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 112 - 179
Target Start/End: Original strand, 24701586 - 24701653
Alignment:
Q  112 gattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagcc 179  Q
    ||||| ||||||||| |||||||||||||||  | || |||||||| || ||||||| ||||||||||    
T  24701586 gattagtaacttcagggacgaaaattcaaatggcttatatttgcagggatgaaagacctatttaagcc 24701653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 10 - 53
Target Start/End: Original strand, 26953312 - 26953355
Alignment:
Q  10 atccctccaaatataggtcatttgaattttcgcctctaaagtta 53  Q
    |||||| ||||||||||||||||||||||||| |||| ||||||    
T  26953312 atccctgcaaatataggtcatttgaattttcgtctctgaagtta 26953355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 10 - 53
Target Start/End: Original strand, 29980849 - 29980892
Alignment:
Q  10 atccctccaaatataggtcatttgaattttcgcctctaaagtta 53  Q
    |||||| ||||||||||||||||||||||||| | |||||||||    
T  29980849 atccctgcaaatataggtcatttgaattttcgtccctaaagtta 29980892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 113 - 168
Target Start/End: Complemental strand, 46849724 - 46849669
Alignment:
Q  113 attaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagac 168  Q
    |||||||||||||| ||||||||||||||| ||||| |||| ||| ||||| ||||    
T  46849724 attaataacttcagggacgaaaattcaaatgacctatatttacagggacgagagac 46849669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 112 - 173
Target Start/End: Complemental strand, 37152605 - 37152544
Alignment:
Q  112 gattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatt 173  Q
    ||||| ||||||||  ||||||||||||||| ||||| ||||| || |||||||||| ||||    
T  37152605 gattagtaacttcatggacgaaaattcaaatgacctatatttgtagggacgaaagacatatt 37152544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 41
Target Start/End: Complemental strand, 1040476 - 1040440
Alignment:
Q  5 attttatccctccaaatataggtcatttgaattttcg 41  Q
    |||| |||||| |||||||||||||||||||||||||    
T  1040476 atttcatccctacaaatataggtcatttgaattttcg 1040440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 41
Target Start/End: Complemental strand, 1047382 - 1047346
Alignment:
Q  5 attttatccctccaaatataggtcatttgaattttcg 41  Q
    |||| |||||| |||||||||||||||||||||||||    
T  1047382 atttcatccctacaaatataggtcatttgaattttcg 1047346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 17 - 53
Target Start/End: Original strand, 25415062 - 25415098
Alignment:
Q  17 caaatataggtcatttgaattttcgcctctaaagtta 53  Q
    ||||||||||||||||||||||||| |||| ||||||    
T  25415062 caaatataggtcatttgaattttcgtctctgaagtta 25415098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0279 (Bit Score: 118; Significance: 3e-60; HSPs: 2)
Name: scaffold0279
Description:

Target: scaffold0279; HSP #1
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 18 - 243
Target Start/End: Complemental strand, 11215 - 10985
Alignment:
Q  18 aaatataggtcatttgaattttcgcctctaaagtta----tcctttcattttgctattgtaaatattaatcatttaaaaaatggtcctaattacatctga 113  Q
    |||||||||||||||||||||||| |  | ||||||    | ||| |||||||| |||| ||||||||||||||| |||||||||| |||||||||||||    
T  11215 aaatataggtcatttgaattttcgtccttgaagttaataattcttccattttgccattgcaaatattaatcatttgaaaaatggtcttaattacatctga 11116  T
Q  114 ttaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagccaaccacctcactcaatcatcacttgccacat-gg 212  Q
    ||| ||||||||  ||||||||||||||| ||||| |||||||| |||||||||| ||||||||||||||| |||   ||||||||||||||||||| ||    
T  11115 ttagtaacttcaaggacgaaaattcaaatgacctatatttgcagggacgaaagacctatttaagccaaccatctcgtccaatcatcacttgccacatggg 11016  T
Q  213 caccacgtcgctaatgacaacccacctcagc 243  Q
    ||||||||||||||||||| |||||||||||    
T  11015 caccacgtcgctaatgacagcccacctcagc 10985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0279; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 128 - 179
Target Start/End: Complemental strand, 10904 - 10853
Alignment:
Q  128 gacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagcc 179  Q
    ||||||||||||||| ||||| |||||||| |||||||||| ||||||||||    
T  10904 gacgaaaattcaaatgacctatatttgcagggacgaaagacctatttaagcc 10853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 118; Significance: 3e-60; HSPs: 44)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 18 - 243
Target Start/End: Original strand, 27557874 - 27558104
Alignment:
Q  18 aaatataggtcatttgaattttcgcctctaaagtta----tcctttcattttgctattgtaaatattaatcatttaaaaaatggtcctaattacatctga 113  Q
    |||||||||||||||||||||||| |  | ||||||    | ||| |||||||| |||| ||||||||||||||| |||||||||| |||||||||||||    
T  27557874 aaatataggtcatttgaattttcgtccttgaagttaataattcttccattttgccattgcaaatattaatcatttgaaaaatggtcttaattacatctga 27557973  T
Q  114 ttaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagccaaccacctcactcaatcatcacttgccacat-gg 212  Q
    ||| ||||||||  ||||||||||||||| ||||| |||||||| |||||||||| ||||||||||||||| |||   ||||||||||||||||||| ||    
T  27557974 ttagtaacttcaaggacgaaaattcaaatgacctatatttgcagggacgaaagacctatttaagccaaccatctcgtccaatcatcacttgccacatggg 27558073  T
Q  213 caccacgtcgctaatgacaacccacctcagc 243  Q
    ||||||||||||||||||| |||||||||||    
T  27558074 caccacgtcgctaatgacagcccacctcagc 27558104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 74 - 243
Target Start/End: Complemental strand, 15828019 - 15827849
Alignment:
Q  74 aaatattaatcatttaaaaaatggtcctaattacatctgattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatt 173  Q
    ||||||||||||||| ||||||||||||||||||||||||||| ||||||||| |||||||||||||||  |||| |||||||| |||||||||| ||||    
T  15828019 aaatattaatcatttgaaaaatggtcctaattacatctgattagtaacttcagggacgaaaattcaaatggcctatatttgcagggacgaaagacatatt 15827920  T
Q  174 taagccaaccacctcactcaatcatcacttgccacat-ggcaccacgtcgctaatgacaacccacctcagc 243  Q
    ||||||||||||||| ||||||||||||||||||||| |||||||||| |||||||||| | |||||||||    
T  15827919 taagccaaccacctcgctcaatcatcacttgccacatgggcaccacgttgctaatgacagctcacctcagc 15827849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 11 - 241
Target Start/End: Original strand, 5636045 - 5636279
Alignment:
Q  11 tccctccaaatataggtcatttgaattttcgcctctaaagtta----tcctttcattttgctattgtaaatattaatcatttaaaaaatggtcctaatta 106  Q
    ||||| ||||||||||||||||||||||||| | |||||||||    ||||| ||||| || |||| ||||||||||||||| |||||||||||||||||    
T  5636045 tccctgcaaatataggtcatttgaattttcgtccctaaagttactaatccttccattt-gccattgcaaatattaatcatttgaaaaatggtcctaatta 5636143  T
Q  107 catctgattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagccaaccacctcactcaatcatcacttgcc 206  Q
    ||||| |||| ||||||||| ||||||||||||||| || || ||||| || ||||||| ||  | |||||||||||||||| | ||||||||| ||| |    
T  5636144 catctaattagtaacttcagggacgaaaattcaaatgacttatatttgaagggacgaaaaaccgaattaagccaaccacctcgcacaatcatcatttgtc 5636243  T
Q  207 acat-ggcaccacgtcgctaatgacaacccacctca 241  Q
    |||| |||||||||| |||||||||| |||||||||    
T  5636244 acatgggcaccacgttgctaatgacagcccacctca 5636279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 17 - 243
Target Start/End: Complemental strand, 44545954 - 44545723
Alignment:
Q  17 caaatataggtcatttgaattttcgcctctaaagtta----tcctttcattttgctattgtaaatattaatcatttaaaaaatggtcctaattacatctg 112  Q
    |||||| | |||||||||||||||| | || ||||||    |||||  ||||| | |||| ||||||||||||||| ||||||||||||||||||||||     
T  44545954 caaatacaagtcatttgaattttcgtccctgaagttactaatccttcaattttaccattgcaaatattaatcattttaaaaatggtcctaattacatcta 44545855  T
Q  113 attaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagccaaccacctcactcaatcatcacttgccacat-g 211  Q
    |||| |||||| |   |||||||||||||| ||||| |||||||   ||||||||| ||||||||||||||||||| ||||||||||||||||||||| |    
T  44545854 attagtaacttaatgaacgaaaattcaaatgacctatatttgcaagaacgaaagacctatttaagccaaccacctcgctcaatcatcacttgccacatgg 44545755  T
Q  212 gcaccacgtcgctaatgacaacccacctcagc 243  Q
    |||||| ||||||||||||||| |||||||||    
T  44545754 gcaccatgtcgctaatgacaactcacctcagc 44545723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 74 - 243
Target Start/End: Complemental strand, 47082145 - 47081975
Alignment:
Q  74 aaatattaatcatttaaaaaatggtcctaattacatctgattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatt 173  Q
    ||||||||||||||| ||||||| | ||||||||||||||||||||||||||| ||||||||||||||| | ||| |||||||| |||||||||| ||||    
T  47082145 aaatattaatcatttgaaaaatgattctaattacatctgattaataacttcagggacgaaaattcaaatgaactatatttgcagggacgaaagacttatt 47082046  T
Q  174 taagccaaccacctcactcaatcatcacttgccaca-tggcaccacgtcgctaatgacaacccacctcagc 243  Q
    ||| ||||||| ||| ||||||||||| || ||||| || |||||||||||||||||||||||||||||||    
T  47082045 taaaccaaccaactcgctcaatcatcatttaccacattgacaccacgtcgctaatgacaacccacctcagc 47081975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 10 - 243
Target Start/End: Complemental strand, 34454846 - 34454608
Alignment:
Q  10 atccctccaaatataggtcatttgaattttcgcctctaaagtta----tcctttcattttgctattgtaaatattaatcatttaaaaaatggtcctaatt 105  Q
    |||||| ||||||||| ||||||||||||||| | || ||||||    | |||||| | |||   || ||||||||||||||| |    |||| ||||||    
T  34454846 atccctgcaaatatagatcatttgaattttcgtccctgaagttactaattctttcaatctgcccctgcaaatattaatcatttgacttttggttctaatt 34454747  T
Q  106 acatctgattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagccaaccacctcactcaatcatcacttgc 205  Q
    ||||||||||| ||||||||| ||||||||||||||| ||||| |||||||| || ||||||| ||||||||| ||||||||| | ||||||||||||||    
T  34454746 acatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcagggatgaaagacctatttaagcaaaccacctcgcccaatcatcacttgc 34454647  T
Q  206 cacat-ggcaccacgtcgctaatgacaacccacctcagc 243  Q
    ||||| ||||||||||||||||||||| |||||||||||    
T  34454646 cacatgggcaccacgtcgctaatgacagcccacctcagc 34454608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 95 - 243
Target Start/End: Complemental strand, 37563631 - 37563482
Alignment:
Q  95 tggtcctaattacatctgattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagccaaccacctcactcaa 194  Q
    |||||||||| ||||||||||| ||||||||| |||||||||||||||  |||| |||||||| || ||||||| ||||||||| ||||||||| | |||    
T  37563631 tggtcctaatcacatctgattagtaacttcagggacgaaaattcaaatgccctatatttgcagggatgaaagacttatttaagcaaaccacctcgcccaa 37563532  T
Q  195 tcatcacttgccacat-ggcaccacgtcgctaatgacaacccacctcagc 243  Q
    |||||||||||||||| ||||||||||||||||||||| |||||||||||    
T  37563531 tcatcacttgccacatgggcaccacgtcgctaatgacagcccacctcagc 37563482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 18 - 239
Target Start/End: Original strand, 47121304 - 47121529
Alignment:
Q  18 aaatataggtcatttgaattttcgcctctaaagttatc----ctttcattttgctattgtaaatattaatcatttaaaaaatggtcctaattacatctga 113  Q
    ||||||||||| ||| |||||||| | || ||||||||    ||| |||||| | |||| |||||||||| |||| |||||||||||||||||||| |||    
T  47121304 aaatataggtcttttaaattttcgtccctgaagttatcaatccttccattttcccattgcaaatattaattatttgaaaaatggtcctaattacatttga 47121403  T
Q  114 ttaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagccaaccacctcactcaatcatcacttgccacat-gg 212  Q
    |||  |||||||| ||||||||||||||| ||||| |||||||| || ||||| | |||||||||||||||| ||   |||||||||| |||||||| ||    
T  47121404 ttag-aacttcagggacgaaaattcaaatgacctatatttgcagggatgaaaggcctatttaagccaaccacttcgtccaatcatcacctgccacatggg 47121502  T
Q  213 caccacgtcgctaatgacaacccacct 239  Q
    |||||||||| ||||| ||||||||||    
T  47121503 caccacgtcgttaatggcaacccacct 47121529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 60 - 227
Target Start/End: Original strand, 19980022 - 19980190
Alignment:
Q  60 cattttgctattgtaaatattaatcatttaaaaaatggtcctaattacatctgattaataacttcagagacgaaaattcaaataacctaaatttgcagag 159  Q
    ||||||||  ||| ||||||||||||||| |||||||||| |||||||||||||||| ||||||||  ||||||||||||||| | ||| ||||| |  |    
T  19980022 cattttgccgttgcaaatattaatcatttgaaaaatggtcataattacatctgattagtaacttcaaggacgaaaattcaaatgatctatatttggaagg 19980121  T
Q  160 acgaaagacgtatttaagccaaccacctcactcaatcatcacttgccacat-ggcaccacgtcgctaat 227  Q
    ||||||||| ||||||||| ||||||||| | ||||||||||||||||||| |||||||| ||||||||    
T  19980122 acgaaagacctatttaagcgaaccacctcgcccaatcatcacttgccacatgggcaccacatcgctaat 19980190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 11 - 243
Target Start/End: Original strand, 20947212 - 20947449
Alignment:
Q  11 tccctccaaatataggtcatttgaattttcgcctctaaagtta----tcctttcattttgctattgtaaatattaatcatttaaaaaatggtcctaatta 106  Q
    ||||| ||||||||||||||||||||||||| |  | ||||||    ||||| || | ||| | |  ||||||||||||||| |||||||||| ||||||    
T  20947212 tcccttcaaatataggtcatttgaattttcgtccatgaagttactaatccttccaatctgccactacaaatattaatcatttgaaaaatggtcataatta 20947311  T
Q  107 catctgattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagccaaccacctcactcaatcatcacttgcc 206  Q
    |||||||||| ||||||||  ||||||||||||||| ||||| ||||| || ||||||| |  |||||||| |||||||||    ||||||||| |||||    
T  20947312 catctgattagtaacttcaaggacgaaaattcaaatgacctatatttgaagggacgaaatatctatttaagtcaaccaccttgtccaatcatcatttgcc 20947411  T
Q  207 acat-ggcaccacgtcgctaatgacaacccacctcagc 243  Q
    |||| |||||||||||| |||||||| |||||||||||    
T  20947412 acatgggcaccacgtcgttaatgacagcccacctcagc 20947449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 101 - 243
Target Start/End: Complemental strand, 26825901 - 26825758
Alignment:
Q  101 taattacatctgattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagccaaccacctcactcaatcatca 200  Q
    |||||| ||||||||| ||||||||| ||||||||||||||| ||||| |||||||| || |||| || ||||||||| ||||||||| | |||||||||    
T  26825901 taattatatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcagggatgaaatacctatttaagcaaaccacctcgcccaatcatca 26825802  T
Q  201 cttgccacat-ggcaccacgtcgctaatgacaacccacctcagc 243  Q
    |||||||||| ||||||||||||||||||||||| |||||||||    
T  26825801 cttgccacatgggcaccacgtcgctaatgacaactcacctcagc 26825758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 74 - 243
Target Start/End: Complemental strand, 43938192 - 43938022
Alignment:
Q  74 aaatattaatcatttaaaaaatggtcctaattacatctgattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatt 173  Q
    ||||||||||||||| |    ||||||||||||||| |||||| ||||||||| ||||||||||||||| ||||| ||||| || || |||| |  ||||    
T  43938192 aaatattaatcatttgacttttggtcctaattacatatgattagtaacttcagggacgaaaattcaaatgacctatatttgtagggatgaaatatctatt 43938093  T
Q  174 taagccaaccacctcactcaatcatcacttgccacatg-gcaccacgtcgctaatgacaacccacctcagc 243  Q
    ||||| ||||||||| ||||||||||||||||||||||  |||||||||| |||||||| |||||||||||    
T  43938092 taagcaaaccacctcgctcaatcatcacttgccacatgtacaccacgtcgttaatgacagcccacctcagc 43938022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 17 - 241
Target Start/End: Complemental strand, 5280630 - 5280401
Alignment:
Q  17 caaatataggtcatttgaattttcgcctctaaagtta----tcctttcattttgctattgtaaatattaatcatttaaaaaatggtcctaattacatctg 112  Q
    ||||||||||||||||||||||||| | || ||||||    |||||| | | ||  |||| ||||||||||||||| ||||||||||||||| |||||||    
T  5280630 caaatataggtcatttgaattttcgtccctgaagttactaatcctttgaatctgtcattgcaaatattaatcatttgaaaaatggtcctaatcacatctg 5280531  T
Q  113 attaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagccaaccacctcactcaatcatcacttgccacat-g 211  Q
    |||| ||| ||||  |||||||||||||||   ||| ||| |  |  ||||||||| |||||||| |||||| ||| | ||||||||||||||||||| |    
T  5280530 attagtaagttcaaggacgaaaattcaaatggtctatattcgttggaacgaaagacctatttaaggcaaccatctcgcccaatcatcacttgccacatgg 5280431  T
Q  212 gcaccacgtcgctaatgacaacccacctca 241  Q
    | ||||| || |||||||||||||||||||    
T  5280430 gtaccacatcactaatgacaacccacctca 5280401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 95 - 231
Target Start/End: Complemental strand, 12928316 - 12928179
Alignment:
Q  95 tggtcctaattacatctgattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagccaaccacctcactcaa 194  Q
    |||| |||||||||| |||||| | ||||||| ||||||||||||||| || || |||||||| |  ||||||| ||||||||  ||||||||| | |||    
T  12928316 tggttctaattacatgtgattagtgacttcagggacgaaaattcaaatgacttatatttgcaggggtgaaagacctatttaagaaaaccacctcgcccaa 12928217  T
Q  195 tcatcacttgccacat-ggcaccacgtcgctaatgaca 231  Q
    |||||||||||||| | || ||||||||||||||||||    
T  12928216 tcatcacttgccacttgggtaccacgtcgctaatgaca 12928179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 74 - 177
Target Start/End: Complemental strand, 12929552 - 12929449
Alignment:
Q  74 aaatattaatcatttaaaaaatggtcctaattacatctgattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatt 173  Q
    ||||||||||||||| |    |||||||||||||||||||||| ||||||||  ||||||||||||||| ||||| |||||||| || ||||||| ||||    
T  12929552 aaatattaatcatttgacttttggtcctaattacatctgattagtaacttcatggacgaaaattcaaatgacctatatttgcagggatgaaagacctatt 12929453  T
Q  174 taag 177  Q
    ||||    
T  12929452 taag 12929449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 74 - 157
Target Start/End: Complemental strand, 45586669 - 45586586
Alignment:
Q  74 aaatattaatcatttaaaaaatggtcctaattacatctgattaataacttcagagacgaaaattcaaataacctaaatttgcag 157  Q
    |||| |||||||||| |||||||||||||||||||| |||||| ||||||||  ||||||||||||||| ||||| ||||||||    
T  45586669 aaatgttaatcatttgaaaaatggtcctaattacatatgattagtaacttcaaggacgaaaattcaaatgacctatatttgcag 45586586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 74 - 243
Target Start/End: Complemental strand, 35262919 - 35262753
Alignment:
Q  74 aaatattaatcatttaaaaaatggtcctaattacatctgattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatt 173  Q
    |||||||||| |||| ||||||  | |||||||||||| ||    ||||||||  | ||||||||||||  | || |||||||| ||||||| |  ||||    
T  35262919 aaatattaattatttgaaaaataattctaattacatcttat----aacttcaggaaagaaaattcaaattgcttatatttgcagggacgaaatatctatt 35262824  T
Q  174 taagccaaccacctcactcaatcatcacttgccacat-ggcaccacgtcgctaatgacaacccacctcagc 243  Q
    |||| ||||||| |  ||||||||||||||||||||| |||||||  |||||||| |||||||||||||||    
T  35262823 taagtcaaccacattgctcaatcatcacttgccacatgggcaccatatcgctaataacaacccacctcagc 35262753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 11 - 177
Target Start/End: Complemental strand, 12931103 - 12930933
Alignment:
Q  11 tccctccaaatataggtcatttgaattttcgcctctaaagtta----tcctttcattttgctattgtaaatattaatcatttaaaaaatggtcctaatta 106  Q
    ||||| ||||||| ||||||||||||||||| | || ||||||    ||||| || | |||   || ||||||||||||||| |    ||||||||||||    
T  12931103 tccctgcaaatattggtcatttgaattttcgtccctgaagttactaatccttccaatctgcccatgcaaatattaatcatttgacttttggtcctaatta 12931004  T
Q  107 catctgattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaag 177  Q
    ||||||||||  |||||||  ||||||||||||||| ||||| |||||||| || |||| || ||||||||    
T  12931003 catctgattagaaacttcatggacgaaaattcaaatgacctatatttgcagggatgaaacacctatttaag 12930933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 170 - 239
Target Start/End: Original strand, 23191035 - 23191105
Alignment:
Q  170 tatttaagccaaccacctcactcaatcatcacttgccacatgg-caccacgtcgctaatgacaacccacct 239  Q
    ||||||||||||||||||| | ||||||||||||| ||||||| || |||||||||||||||| |||||||    
T  23191035 tatttaagccaaccacctcgcccaatcatcacttgtcacatggtcatcacgtcgctaatgacatcccacct 23191105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 111 - 179
Target Start/End: Complemental strand, 26825698 - 26825630
Alignment:
Q  111 tgattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagcc 179  Q
    |||||| ||||||||| ||||||||||||||| ||||| |||| ||| |||||||||| ||||||||||    
T  26825698 tgattagtaacttcagggacgaaaattcaaatgacctatatttacagggacgaaagacatatttaagcc 26825630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 112 - 179
Target Start/End: Complemental strand, 34454551 - 34454484
Alignment:
Q  112 gattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagcc 179  Q
    ||||| |||||||| |||||||||||||||| ||||| |||||||| |||||| ||| ||||||||||    
T  34454551 gattagtaacttcaaagacgaaaattcaaatgacctatatttgcagggacgaaggacatatttaagcc 34454484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 112 - 180
Target Start/End: Original strand, 5280588 - 5280656
Alignment:
Q  112 gattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagcca 180  Q
    ||||| ||||||||| ||||||||||||||| ||||| |||||||  ||| |||||| |||||||||||    
T  5280588 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaaggacaaaagacctatttaagcca 5280656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 113 - 177
Target Start/End: Complemental strand, 44545661 - 44545597
Alignment:
Q  113 attaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaag 177  Q
    |||| |||||||||  |||||||||||||| ||||| |||||||||||| |||||| ||||||||    
T  44545661 attagtaacttcaggaacgaaaattcaaatgacctatatttgcagagacaaaagacctatttaag 44545597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 112 - 179
Target Start/End: Complemental strand, 5280339 - 5280272
Alignment:
Q  112 gattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagcc 179  Q
    ||||| |||||||||  ||||||||||||||  |||| |||||||| |||||||||| ||||||||||    
T  5280339 gattagtaacttcagtaacgaaaattcaaatggcctatatttgcagggacgaaagacttatttaagcc 5280272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 112 - 179
Target Start/End: Original strand, 26825947 - 26826014
Alignment:
Q  112 gattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagcc 179  Q
    ||||||||||||||  ||||||||||||||| || || ||||||||  ||||||||| ||||||||||    
T  26825947 gattaataacttcatggacgaaaattcaaatgacatatatttgcaggaacgaaagacctatttaagcc 26826014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 128 - 179
Target Start/End: Original strand, 27558185 - 27558236
Alignment:
Q  128 gacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagcc 179  Q
    ||||||||||||||| ||||| |||||||| |||||||||| ||||||||||    
T  27558185 gacgaaaattcaaatgacctatatttgcagggacgaaagacctatttaagcc 27558236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 112 - 179
Target Start/End: Original strand, 37563671 - 37563738
Alignment:
Q  112 gattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagcc 179  Q
    ||||| ||||||||| |||||||||||||||  |||| |||| ||| |||||||||| ||||||||||    
T  37563671 gattagtaacttcagggacgaaaattcaaatggcctatatttacagggacgaaagacatatttaagcc 37563738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 112 - 179
Target Start/End: Complemental strand, 47081914 - 47081847
Alignment:
Q  112 gattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagcc 179  Q
    ||||| |||||||||||| |||||||||||| || || ||||| || |||||||||| ||||||||||    
T  47081914 gattagtaacttcagagatgaaaattcaaatgacatatatttgaagggacgaaagacctatttaagcc 47081847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 113 - 178
Target Start/End: Original strand, 47121596 - 47121661
Alignment:
Q  113 attaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagc 178  Q
    |||| |||||||||||||||||||||||||   | | |||||||| |||||||||| |||||||||    
T  47121596 attagtaacttcagagacgaaaattcaaatggtcaatatttgcagggacgaaagacctatttaagc 47121661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 112 - 176
Target Start/End: Original strand, 5636342 - 5636406
Alignment:
Q  112 gattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaa 176  Q
    ||||| ||||||||| ||||||||||||||| || || |||||||  |||||||||| |||||||    
T  5636342 gattagtaacttcagggacgaaaattcaaattacttatatttgcaaggacgaaagacctatttaa 5636406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 112 - 168
Target Start/End: Original strand, 12931055 - 12931111
Alignment:
Q  112 gattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagac 168  Q
    ||||| ||||||||| ||||||||||||||| ||| | |||||||| ||||||||||    
T  12931055 gattagtaacttcagggacgaaaattcaaatgaccaatatttgcagggacgaaagac 12931111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 112 - 176
Target Start/End: Complemental strand, 20947260 - 20947196
Alignment:
Q  112 gattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaa 176  Q
    ||||| ||||||||  ||||||||||||||| ||||| ||||| || |||||||||| |||||||    
T  20947260 gattagtaacttcatggacgaaaattcaaatgacctatatttgaagggacgaaagacctatttaa 20947196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 88
Target Start/End: Original strand, 47081866 - 47081947
Alignment:
Q  11 tccctccaaatataggtcatttgaattttcgcctctaaagtta----tcctttcattttgctattgtaaatattaatcattt 88  Q
    ||||| |||||||| |||||||||||||||  |||| ||||||    |||||||| | ||| ||||||||||||||||||||    
T  47081866 tcccttcaaatatatgtcatttgaattttcatctctgaagttactaatcctttcaatctgccattgtaaatattaatcattt 47081947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 112 - 179
Target Start/End: Complemental strand, 12928104 - 12928037
Alignment:
Q  112 gattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagcc 179  Q
    ||||| |||||| || ||||||||||||| |  |||| |||||||| |||||||||| ||||||||||    
T  12928104 gattagtaactttagggacgaaaattcaagtggcctatatttgcagcgacgaaagacatatttaagcc 12928037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 112 - 179
Target Start/End: Complemental strand, 37563421 - 37563354
Alignment:
Q  112 gattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagcc 179  Q
    ||||| ||| ||||| |||||||||||||||  |||| |||||||| ||| |||||| ||||||||||    
T  37563421 gattagtaaattcagggacgaaaattcaaatggcctatatttgcagggacaaaagacatatttaagcc 37563354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 112 - 179
Target Start/End: Complemental strand, 43937961 - 43937894
Alignment:
Q  112 gattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagcc 179  Q
    ||||| ||||||||| || |||||||||||| ||||| |||| ||  |||||||||| ||||||||||    
T  43937961 gattagtaacttcagggatgaaaattcaaatgacctatatttacaaggacgaaagacatatttaagcc 43937894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 112 - 179
Target Start/End: Original strand, 43938211 - 43938278
Alignment:
Q  112 gattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagcc 179  Q
    ||||| ||||||||| |||||||||||||||  | || |||||||  |||||||||| ||||||||||    
T  43938211 gattagtaacttcagggacgaaaattcaaatggcttatatttgcaaggacgaaagacatatttaagcc 43938278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 112 - 178
Target Start/End: Original strand, 25049478 - 25049544
Alignment:
Q  112 gattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagc 178  Q
    ||||| ||||||||| ||  ||||||||||| ||||| |||| ||| |||||||||| |||||||||    
T  25049478 gattagtaacttcagggagaaaaattcaaatgacctatatttacagggacgaaagacctatttaagc 25049544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 113 - 179
Target Start/End: Original strand, 34454798 - 34454864
Alignment:
Q  113 attaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagcc 179  Q
    |||| ||||||||| ||||||||||||||| | ||| |||||||| || ||||| | ||||||||||    
T  34454798 attagtaacttcagggacgaaaattcaaatgatctatatttgcagggatgaaagtcctatttaagcc 34454864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 112 - 181
Target Start/End: Original strand, 44545912 - 44545981
Alignment:
Q  112 gattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagccaa 181  Q
    ||||| ||||||||| ||||||||||||||| || |  |||||||  |||||||||| ||||||| ||||    
T  44545912 gattagtaacttcagggacgaaaattcaaatgacttgtatttgcatggacgaaagacctatttaaaccaa 44545981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 112 - 164
Target Start/End: Complemental strand, 5636093 - 5636041
Alignment:
Q  112 gattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaa 164  Q
    ||||| |||||| || ||||||||||||||| ||||| |||||||| ||||||    
T  5636093 gattagtaactttagggacgaaaattcaaatgacctatatttgcagggacgaa 5636041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 41
Target Start/End: Original strand, 26825836 - 26825872
Alignment:
Q  5 attttatccctccaaatataggtcatttgaattttcg 41  Q
    |||| |||||| |||||||||||||||||||||||||    
T  26825836 atttcatccctgcaaatataggtcatttgaattttcg 26825872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 112 - 176
Target Start/End: Complemental strand, 35262693 - 35262629
Alignment:
Q  112 gattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaa 176  Q
    ||||| ||||||||||||| ||||||||||| ||   | ||||||| |||||||||| |||||||    
T  35262693 gattagtaacttcagagacaaaaattcaaatgactatattttgcagggacgaaagacctatttaa 35262629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 41
Target Start/End: Original strand, 43938100 - 43938136
Alignment:
Q  5 attttatccctccaaatataggtcatttgaattttcg 41  Q
    |||| |||||| |||||||||||||||||||||||||    
T  43938100 atttcatccctacaaatataggtcatttgaattttcg 43938136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 110; Significance: 2e-55; HSPs: 64)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 10 - 243
Target Start/End: Complemental strand, 40422526 - 40422289
Alignment:
Q  10 atccctccaaatataggtcatttgaattttcgcctctaaagtta----tcctttcattttgctattgtaaatattaatcatttaaaaaatggtcctaatt 105  Q
    |||||| ||||||||||||||||||||||||| | || ||||||    |||||  | | ||| | || ||||||||||||||| ||||||||||||||||    
T  40422526 atccctgcaaatataggtcatttgaattttcgtccctgaagttactaatccttcaaatctgccactgcaaatattaatcatttgaaaaatggtcctaatt 40422427  T
Q  106 acatctgattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagccaaccacctcactcaatcatcacttgc 205  Q
    ||||||||||| ||||||||| ||||||||||||||| ||||| |||||||| ||| |||||| ||||||||||||||||||| | ||||||||| ||||    
T  40422426 acatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcagggac-aaagacctatttaagccaaccacctctcccaatcatcaattgc 40422328  T
Q  206 cacat-ggcaccacgtcgctaatgacaacccacctcagc 243  Q
     |||| ||||||||||||||||||||| |||| ||||||    
T  40422327 aacatgggcaccacgtcgctaatgacagcccatctcagc 40422289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 74 - 243
Target Start/End: Original strand, 22763681 - 22763851
Alignment:
Q  74 aaatattaatcatttaaaaaatggtcctaattacatctgattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatt 173  Q
    ||||||||||||||| ||||||||||||||||| ||||||||| ||||||||| |||||||||||||||| |  | |||||||| |||||||||| ||||    
T  22763681 aaatattaatcatttgaaaaatggtcctaattagatctgattagtaacttcagggacgaaaattcaaatagcagatatttgcagggacgaaagacctatt 22763780  T
Q  174 taagccaaccacctcactcaatcatcacttgccacatg-gcaccacgtcgctaatgacaacccacctcagc 243  Q
    ||||||||||||||| | ||||||||| |||||||||| |||||||||||||||||||| |||||||||||    
T  22763781 taagccaaccacctcgcccaatcatcatttgccacatgagcaccacgtcgctaatgacagcccacctcagc 22763851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 17 - 230
Target Start/End: Complemental strand, 15716235 - 15716017
Alignment:
Q  17 caaatataggtcatttgaattttcgcctctaaagtta----tcctttcattttgctattgtaaatattaatcatttaaaaaatggtcctaattacatctg 112  Q
    |||||||| ||||||| |||||||| | || ||||||    |||||  ||||||| |||  ||||||||||||||| |||||||||| ||||||||||||    
T  15716235 caaatatatgtcatttaaattttcgtccctgaagttactaatccttctattttgccattacaaatattaatcatttgaaaaatggtcataattacatctg 15716136  T
Q  113 attaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagccaaccacctcactcaatcatcacttgccacatg- 211  Q
    |||| ||||||||||||||||||||||||| ||||| |||||||| ||  |||||| ||||||| | ||||||||| ||||||||||||||||||||||     
T  15716135 attagtaacttcagagacgaaaattcaaatgacctatatttgcagggataaaagacctatttaaactaaccacctcgctcaatcatcacttgccacatga 15716036  T
Q  212 gcaccacgtcgctaatgac 230  Q
    ||||||||| |||||||||    
T  15716035 gcaccacgtagctaatgac 15716017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 17 - 241
Target Start/End: Original strand, 23514046 - 23514275
Alignment:
Q  17 caaatataggtcatttgaattttcgcctctaaagtta----tcctttcattttgctattgtaaatattaatcatttaaaaaatggtcctaattacatctg 112  Q
    |||||| || ||||||||||||||| |  ||||||||    |||||||||||||| |||| ||||||||||||||| ||||||||||||||||||||| |    
T  23514046 caaataaagttcatttgaattttcgaccttaaagttactaatcctttcattttgccattgcaaatattaatcatttgaaaaatggtcctaattacatcag 23514145  T
Q  113 attaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagccaaccacctcactcaatcatcacttgccacatgg 212  Q
    |||| || |||||  ||||||||||||||||  ||| |||| ||| |||||||||  |||||||||||| || ||||| |||||||||||||||||||||    
T  23514146 attagtagcttcatggacgaaaattcaaatagtctatatttacagggacgaaagaactatttaagccaatcatctcacccaatcatcacttgccacatgg 23514245  T
Q  213 -caccacgtcgctaatgacaacccacctca 241  Q
     |||||||| ||||||||||  ||||||||    
T  23514246 acaccacgtggctaatgacagtccacctca 23514275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 74 - 243
Target Start/End: Complemental strand, 37343080 - 37342910
Alignment:
Q  74 aaatattaatcatttaaaaaatggtcctaattacatctgattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatt 173  Q
    ||||||||||||||| |    |||||||||||||||||||||| ||||||||| || |||||||||||| ||||| |||||||| || ||||||| ||||    
T  37343080 aaatattaatcatttgacttttggtcctaattacatctgattagtaacttcagggatgaaaattcaaatgacctatatttgcagggatgaaagacctatt 37342981  T
Q  174 taagccaaccacctcactcaatcatcacttgccacat-ggcaccacgtcgctaatgacaacccacctcagc 243  Q
    ||||| ||||||||||| ||||||||||||||||||| ||||||| |||||||||||||||||||||||||    
T  37342980 taagcaaaccacctcacccaatcatcacttgccacatgggcaccatgtcgctaatgacaacccacctcagc 37342910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 74 - 243
Target Start/End: Original strand, 31689981 - 31690151
Alignment:
Q  74 aaatattaatcatttaaaaaatggtcctaattacatctgattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatt 173  Q
    |||| |||||||||| |||||| |||||||||||||||||||| ||||||||| ||||||||||||||| ||||| |||| ||| ||||||| || ||||    
T  31689981 aaatgttaatcatttgaaaaattgtcctaattacatctgattagtaacttcagggacgaaaattcaaatgacctatattttcagggacgaaaaacctatt 31690080  T
Q  174 taagccaaccacctcactcaatcatcacttgccacat-ggcaccacgtcgctaatgacaacccacctcagc 243  Q
    |||| ||||||| || | ||||||||||||||||||| |||| |||||| |||||||||||||||||||||    
T  31690081 taagacaaccacttcgcccaatcatcacttgccacatgggcatcacgtcactaatgacaacccacctcagc 31690151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 74 - 243
Target Start/End: Original strand, 43866797 - 43866967
Alignment:
Q  74 aaatattaatcatttaaaaaatggtcctaattacatctgattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatt 173  Q
    ||||||||||||||| |    |||||||||||||||||||||| ||||||||| || |||||||||||| ||||| |||||||| || ||||||| ||||    
T  43866797 aaatattaatcatttgacttttggtcctaattacatctgattagtaacttcagggatgaaaattcaaatgacctatatttgcagggatgaaagacttatt 43866896  T
Q  174 taagccaaccacctcactcaatcatcacttgccacat-ggcaccacgtcgctaatgacaacccacctcagc 243  Q
    ||||| ||||||||||| ||||||||||||||||||| ||||||||| ||||||||||| |||||||||||    
T  43866897 taagcaaaccacctcacccaatcatcacttgccacatgggcaccacgccgctaatgacagcccacctcagc 43866967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 11 - 243
Target Start/End: Original strand, 11478164 - 11478401
Alignment:
Q  11 tccctccaaatataggtcatttgaattttcgcctctaaagtta----tcctttcattttgctattgtaaatattaatcatttaaaaaatggtcctaatta 106  Q
    ||||| ||||||||||||||||||||||||| |  | ||||||    |||||||| | |||   || ||||||||||||||| |    ||| ||||||||    
T  11478164 tccctgcaaatataggtcatttgaattttcgtccttgaagttactaatcctttcaatctgcccctgcaaatattaatcatttgacttttggccctaatta 11478263  T
Q  107 catctgattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagccaaccacctcactcaatcatcacttgcc 206  Q
    |||||||||| ||||||||| ||||||||||||||| ||||| |||||||| || ||||||| ||||||||| |||||| || | |||||||||||||||    
T  11478264 catctgattagtaacttcagcgacgaaaattcaaatgacctatatttgcagggatgaaagacctatttaagcaaaccacatcgcccaatcatcacttgcc 11478363  T
Q  207 acat-ggcaccacgtcgctaatgacaacccacctcagc 243  Q
    |||| |||||||||||||||||||||  ||||||||||    
T  11478364 acatgggcaccacgtcgctaatgacagtccacctcagc 11478401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 11 - 243
Target Start/End: Original strand, 20096039 - 20096276
Alignment:
Q  11 tccctccaaatataggtcatttgaattttcgcctctaaagtta----tcctttcattttgctattgtaaatattaatcatttaaaaaatggtcctaatta 106  Q
    ||||| |||||||| |||||||||||||| | | || ||||||    ||||| || |||||   || ||||||||||||||| |    ||||||||||||    
T  20096039 tccctgcaaatatatgtcatttgaatttttgtccctgaagttactaatccttccaatttgcctctgcaaatattaatcatttgacttttggtcctaatta 20096138  T
Q  107 catctgattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagccaaccacctcactcaatcatcacttgcc 206  Q
    |||||||||| ||||||||| || |||||||||||| ||||| ||||| || || ||||||| ||||||||| ||||||||| | |||||||||||||||    
T  20096139 catctgattagtaacttcagggaagaaaattcaaatgacctatatttgtagggatgaaagacctatttaagcaaaccacctctcccaatcatcacttgcc 20096238  T
Q  207 acat-ggcaccacgtcgctaatgacaacccacctcagc 243  Q
    |||| ||||||||||||||||||||| |||||||||||    
T  20096239 acatgggcaccacgtcgctaatgacagcccacctcagc 20096276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 17 - 241
Target Start/End: Original strand, 40525532 - 40525761
Alignment:
Q  17 caaatataggtcatttgaattttcgcctctaaagtta----tcctttcattttgctattgtaaatattaatcatttaaaaaatggtcctaattacatctg 112  Q
    |||||||| |||||||||||||||| | || ||||||    ||||| || | ||| | || ||||||||||||||| |    ||||||||||||||||||    
T  40525532 caaatatatgtcatttgaattttcgtccctgaagttactaatccttccaatctgccactgcaaatattaatcatttgacttttggtcctaattacatctg 40525631  T
Q  113 attaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagccaaccacctcactcaatcatcacttgccacat-g 211  Q
    |||| ||||||||| ||||||||||||||| ||||| |||| ||| || ||||||| ||||||||| ||||||||| | ||||||||||||||||||| |    
T  40525632 attagtaacttcagggacgaaaattcaaatgacctatatttacagggatgaaagacctatttaagcaaaccacctcgcccaatcatcacttgccacatgg 40525731  T
Q  212 gcaccacgtcgctaatgacaacccacctca 241  Q
    ||||||| |||||||||||| |||||||||    
T  40525732 gcaccacttcgctaatgacatcccacctca 40525761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 11 - 239
Target Start/End: Complemental strand, 547800 - 547567
Alignment:
Q  11 tccctccaaatataggtcatttgaattttcgcctctaaagtta----tcctttcattttgctattgtaaatattaatcatttaaaaaatggtcctaatta 106  Q
    ||||| ||||||||| ||||||||||||||| | |||||||||    ||||| || | ||| | |  ||||||||||||||| |    ||||||||||||    
T  547800 tccctgcaaatatagatcatttgaattttcgtccctaaagttactaatccttccaatctgccactacaaatattaatcatttgacttttggtcctaatta 547701  T
Q  107 catctgattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagccaaccacctcactcaatcatcacttgcc 206  Q
    |||||||||| ||||||||  ||||||||||||||| ||||| | |||||| || ||||||| ||||||||| ||||||||| | ||||||||||||| |    
T  547700 catctgattagtaacttcaaggacgaaaattcaaatgacctataattgcagggatgaaagacctatttaagcaaaccacctcgcccaatcatcacttgtc 547601  T
Q  207 acat-ggcaccacgtcgctaatgacaacccacct 239  Q
    |||| |||| ||||||||||||||||||||||||    
T  547600 acatgggcatcacgtcgctaatgacaacccacct 547567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 97 - 242
Target Start/End: Complemental strand, 29190434 - 29190289
Alignment:
Q  97 gtcctaattacatctgattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagccaaccacctcactcaatc 196  Q
    |||||||||||||||||||| |||||| || ||||||||||||||| ||||| |||||||| || ||||||| |||||||| ||| |||||| |||||||    
T  29190434 gtcctaattacatctgattagtaactttagggacgaaaattcaaatgacctatatttgcagggatgaaagacctatttaag-caaacacctcgctcaatc 29190336  T
Q  197 atcacttgccacat-ggcaccacgtcgctaatgacaacccacctcag 242  Q
    |||||||||||||| |||||||||||||||||| |||||||||||||    
T  29190335 atcacttgccacatgggcaccacgtcgctaatggcaacccacctcag 29190289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 74 - 243
Target Start/End: Complemental strand, 36623651 - 36623481
Alignment:
Q  74 aaatattaatcatttaaaaaatggtcctaattacatctgattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatt 173  Q
    ||||||||||||||| |    |||||||||||||||||||||| ||||||||| || |||||||||||| ||||| |||||||| || ||||||| ||||    
T  36623651 aaatattaatcatttgacttttggtcctaattacatctgattagtaacttcagggatgaaaattcaaatgacctatatttgcagggatgaaagacctatt 36623552  T
Q  174 taagccaaccacctcactcaatcatcacttgccacat-ggcaccacgtcgctaatgacaacccacctcagc 243  Q
    | ||| ||||| ||||| ||||||||||||||||||| ||||||||||||||||||||| |||| ||||||    
T  36623551 tgagcaaaccatctcacccaatcatcacttgccacatgggcaccacgtcgctaatgacagcccaactcagc 36623481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 101 - 243
Target Start/End: Complemental strand, 35163773 - 35163630
Alignment:
Q  101 taattacatctgattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagccaaccacctcactcaatcatca 200  Q
    |||||||||||||||| |||||||||  |||||||||||||| ||||| ||||  || |||||||||| ||||||||||||||||||  | |||||||||    
T  35163773 taattacatctgattagtaacttcagttacgaaaattcaaatgacctatatttatagggacgaaagacttatttaagccaaccaccttgcccaatcatca 35163674  T
Q  201 cttgccacat-ggcaccacgtcgctaatgacaacccacctcagc 243  Q
    |||||||||| ||||||||||||||||||||| |||||||||||    
T  35163673 cttgccacatgggcaccacgtcgctaatgacaccccacctcagc 35163630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 11 - 243
Target Start/End: Original strand, 13566429 - 13566666
Alignment:
Q  11 tccctccaaatataggtcatttgaattttcgcctctaaagttat----cctttcattttgctattgtaaatattaatcatttaaaaaatggtcctaatta 106  Q
    ||||| |||||| ||  |||||||||||| | |||| |||||||    |||| |||||||| |||| ||||||||||||||| |||||||||  ||||||    
T  13566429 tccctgcaaatacagtacatttgaatttttgtctctgaagttattgatccttccattttgccattgcaaatattaatcatttgaaaaatggttataatta 13566528  T
Q  107 catctgattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagccaaccacctcactcaatcatcacttgcc 206  Q
    |||||||||| ||| ||||  ||||||||||||||| ||||  |||||||| || |||||||  ||||||| ||||||||||   |||||||||||||      
T  13566529 catctgattagtaaattcaaggacgaaaattcaaatgacctgtatttgcagtgatgaaagaccaatttaagtcaaccacctcggccaatcatcacttgtg 13566628  T
Q  207 acatg-gcaccacgtcgctaatgacaacccacctcagc 243  Q
     |||| |||||||||| ||||||||| |||||||||||    
T  13566629 tcatgagcaccacgtcactaatgacagcccacctcagc 13566666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 74 - 243
Target Start/End: Original strand, 25287878 - 25288048
Alignment:
Q  74 aaatattaatcatttaaaaaatggtcctaattacatctgattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatt 173  Q
    ||||||||||||||| |    |||||||||||||||||||||| ||||||||| ||||||||||||||| ||||| |||||||| || ||||||| ||||    
T  25287878 aaatattaatcatttgacttttggtcctaattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcagggatgaaagacctatt 25287977  T
Q  174 taagccaaccacctcactcaatcatcacttgccacat-ggcaccacgtcgctaatgacaacccacctcagc 243  Q
    ||||  ||||||||| | ||||||||||||||||| | || |||||||| ||||||||| ||||| |||||    
T  25287978 taagaaaaccacctcgcccaatcatcacttgccacttgggtaccacgtcactaatgacagcccacttcagc 25288048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 74 - 234
Target Start/End: Original strand, 41251209 - 41251370
Alignment:
Q  74 aaatattaatcatttaaaaaatggtcctaattacatctgattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatt 173  Q
    ||||||||||||||| |    ||||| |||||||| ||| ||| ||||||||  ||||||||||||||| ||||| |||||||| || ||||||| ||||    
T  41251209 aaatattaatcatttgacttttggtcataattacacctgtttagtaacttcatggacgaaaattcaaatgacctatatttgcagggatgaaagacctatt 41251308  T
Q  174 taagccaaccacctcactcaatcatcacttgccacat-ggcaccacgtcgctaatgacaacc 234  Q
    ||||| ||||||||| |||||||||||||||||| || ||||||||||||||||||||||||    
T  41251309 taagcaaaccacctcgctcaatcatcacttgccatatgggcaccacgtcgctaatgacaacc 41251370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 17 - 181
Target Start/End: Original strand, 9632353 - 9632521
Alignment:
Q  17 caaatataggtcatttgaattttcgcctctaaagtta----tcctttcattttgctattgtaaatattaatcatttaaaaaatggtcctaattacatctg 112  Q
    ||||||||||||||||||||||||| | || ||||||    ||||| |||||||  |||| ||||||||||||||| ||||| ||| |||||||||||||    
T  9632353 caaatataggtcatttgaattttcgtccctgaagttactaatccttccattttgtcattgcaaatattaatcatttgaaaaaaggttctaattacatctg 9632452  T
Q  113 attaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagccaa 181  Q
    |||| ||||||||| |||||||||||||||   ||| |||||||| |||||||||| | ||||||||||    
T  9632453 attagtaacttcagtgacgaaaattcaaatggtctagatttgcagggacgaaagacctgtttaagccaa 9632521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 118 - 240
Target Start/End: Original strand, 41182026 - 41182149
Alignment:
Q  118 taacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagccaaccacctcactcaatcatcacttgccacat-ggcacc 216  Q
    ||||||||| ||||||||||||||| ||||| |||||||| |||||||||| ||||||||| ||||||||| | ||||||||| ||||||||| ||||||    
T  41182026 taacttcagggacgaaaattcaaatgacctatatttgcagggacgaaagacctatttaagcaaaccacctcgcccaatcatcatttgccacatgggcacc 41182125  T
Q  217 acgtcgctaatgacaacccacctc 240  Q
    ||||||||||||||| ||||||||    
T  41182126 acgtcgctaatgacagcccacctc 41182149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 74 - 231
Target Start/End: Complemental strand, 7691 - 7533
Alignment:
Q  74 aaatattaatcatttaaaaaatggtcctaattacatctgattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatt 173  Q
    ||||||||||||||| |    ||||| |||||||||||||||| | ||||||| ||||||||||||||| ||||| |||| ||| || ||||| | ||||    
T  7691 aaatattaatcatttgacttttggtcataattacatctgattagtgacttcagggacgaaaattcaaatgacctatatttacagggatgaaaggcctatt 7592  T
Q  174 taagccaaccacctcactcaatcatcacttgccacatg-gcaccacgtcgctaatgaca 231  Q
    ||||| ||||||||| | |||||||||||||||||||| ||||||||||||||||||||    
T  7591 taagcaaaccacctcgcccaatcatcacttgccacatgagcaccacgtcgctaatgaca 7533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 98 - 243
Target Start/End: Original strand, 23424622 - 23424768
Alignment:
Q  98 tcctaattacatctgattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagccaaccacctcactcaatca 197  Q
    ||||||||||||||||||| ||||||||| ||||||||||||||| | ||| |||||||| || ||||||| ||||||||| | ||||||  ||||||||    
T  23424622 tcctaattacatctgattagtaacttcagggacgaaaattcaaatgatctatatttgcagggatgaaagacctatttaagcaagccaccttgctcaatca 23424721  T
Q  198 tcacttgccacatgg-caccacgtcgctaatgacaacccacctcagc 243  Q
    |||||||||||||||  ||||| ||||||||| || |||||||||||    
T  23424722 tcacttgccacatggataccacatcgctaatgtcagcccacctcagc 23424768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 74 - 243
Target Start/End: Original strand, 24529764 - 24529932
Alignment:
Q  74 aaatattaatcatttaaaaaatggtcctaattacatctgattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatt 173  Q
    ||||||||||||||| |||||||||| |  |||  |||||||| ||||||| | ||||||||||||||| || || ||||||| |||| |||||| ||||    
T  24529764 aaatattaatcatttgaaaaatggtc-tggttatgtctgattagtaacttctg-gacgaaaattcaaatgacttatatttgcaaagacaaaagacctatt 24529861  T
Q  174 taagccaaccacctcactcaatcatcacttgccacat-ggcaccacgtcgctaatgacaacccacctcagc 243  Q
    ||||||||| ||| ||| ||||||||||||||||||| ||||||||||| ||||||||| |||||||||||    
T  24529862 taagccaactaccacacccaatcatcacttgccacatgggcaccacgtcactaatgacagcccacctcagc 24529932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 74 - 243
Target Start/End: Original strand, 26739803 - 26739972
Alignment:
Q  74 aaatattaatcatttaaaaaatggtcctaattacatctgattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatt 173  Q
    ||||||||||||||| |    ||||||||||||||||||||||  |||||||| ||||||| ||||||| ||||| |||||||  || ||||||| ||||    
T  26739803 aaatattaatcatttgacgtttggtcctaattacatctgattaggaacttcagggacgaaa-ttcaaatgacctatatttgcaaggatgaaagacctatt 26739901  T
Q  174 taagccaaccacctcactcaatcatcacttgccacatgg-caccacgtcgctaatgacaacccacctcagc 243  Q
    ||||| ||||||||| | ||||||||||||| ||||||| |||||| |||||||||||| |||||||||||    
T  26739902 taagcaaaccacctcgcccaatcatcacttggcacatggacaccacatcgctaatgacagcccacctcagc 26739972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 98 - 243
Target Start/End: Complemental strand, 41802090 - 41801944
Alignment:
Q  98 tcctaattacatctgattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagccaaccacctcactcaatca 197  Q
    ||||||||||||||||||| || |||||| |||||||||||||||  |||| |||||||| || ||||||| ||||||||  |||||| |||| ||||||    
T  41802090 tcctaattacatctgattattagcttcagggacgaaaattcaaatggcctatatttgcagggatgaaagacctatttaagtaaaccacatcacccaatca 41801991  T
Q  198 tcacttgccacat-ggcaccacgtcgctaatgacaacccacctcagc 243  Q
    ||||||||||| | ||||||||||||||||| ||| |||||||||||    
T  41801990 tcacttgccacgtgggcaccacgtcgctaataacagcccacctcagc 41801944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 74 - 239
Target Start/End: Original strand, 27856828 - 27856994
Alignment:
Q  74 aaatattaatcatttaaaaaatggtcctaattacatctgattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatt 173  Q
    ||||||||||||||| |    ||||| ||||||||| |||||| |||||| |  ||||| ||||||||| |  || |||||||| || ||||||| ||||    
T  27856828 aaatattaatcatttgacttttggtcttaattacatttgattactaactttatggacgataattcaaatgatttatatttgcagggatgaaagacctatt 27856927  T
Q  174 taagccaaccacctcactcaatcatcacttgccacat-ggcaccacgtcgctaatgacaacccacct 239  Q
    ||||| ||||||||| ||||||||||||||||||||| ||||||||||||| ||||||| |||||||    
T  27856928 taagcaaaccacctcgctcaatcatcacttgccacatgggcaccacgtcgccaatgacagcccacct 27856994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 69 - 179
Target Start/End: Original strand, 37713777 - 37713887
Alignment:
Q  69 attgtaaatattaatcatttaaaaaatggtcctaattacatctgattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagac 168  Q
    |||| ||||||||||||||| ||||||||||||||||||||| ||||| ||||||||| |||||||||||| || ||||| |||||||  |||||||||     
T  37713777 attgcaaatattaatcatttgaaaaatggtcctaattacatccgattagtaacttcagggacgaaaattcatatgacctatatttgcatggacgaaagat 37713876  T
Q  169 gtatttaagcc 179  Q
     ||||||||||    
T  37713877 atatttaagcc 37713887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 80 - 176
Target Start/End: Original strand, 40933267 - 40933363
Alignment:
Q  80 taatcatttaaaaaatggtcctaattacatctgattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaa 176  Q
    ||||||||| ||||||| |||||||||||| |||||| ||| |||||| || ||||||||||| ||||| |||| |||||||||||||| |||||||    
T  40933267 taatcatttgaaaaatgatcctaattacatttgattagtaatttcagaaacaaaaattcaaatgacctatatttacagagacgaaagacctatttaa 40933363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 112 - 179
Target Start/End: Complemental strand, 41251190 - 41251123
Alignment:
Q  112 gattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagcc 179  Q
    ||||| ||||||||||||||||||||||| | ||||| |||||||| |||||||||| ||||||||||    
T  41251190 gattagtaacttcagagacgaaaattcaattgacctatatttgcagggacgaaagacctatttaagcc 41251123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 111 - 179
Target Start/End: Original strand, 41182212 - 41182280
Alignment:
Q  111 tgattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagcc 179  Q
    |||||| ||||||||| ||||||||||||||| || || |||||||| |||||||||| ||||||||||    
T  41182212 tgattagtaacttcagggacgaaaattcaaatgacatatatttgcagggacgaaagacatatttaagcc 41182280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 120 - 179
Target Start/End: Complemental strand, 40422219 - 40422160
Alignment:
Q  120 acttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagcc 179  Q
    |||||||||||||||||||| || ||||| |||||||| |||||||||| ||||||||||    
T  40422219 acttcagagacgaaaattcatatgacctatatttgcagggacgaaagacctatttaagcc 40422160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 112 - 179
Target Start/End: Original strand, 40422477 - 40422544
Alignment:
Q  112 gattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagcc 179  Q
    ||||| ||||||||| ||||||||||||||| ||||| |||||||| || ||||||| ||||||||||    
T  40422477 gattagtaacttcagggacgaaaattcaaatgacctatatttgcagggatgaaagacctatttaagcc 40422544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 112 - 178
Target Start/End: Original strand, 26740035 - 26740101
Alignment:
Q  112 gattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagc 178  Q
    ||||| ||||||||  ||||||||||||||| ||||| |||||||| |||||||||| |||||||||    
T  26740035 gattagtaacttcatggacgaaaattcaaatgacctatatttgcagggacgaaagacatatttaagc 26740101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 122 - 176
Target Start/End: Complemental strand, 40933234 - 40933180
Alignment:
Q  122 ttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaa 176  Q
    |||||||||||||||||||||||| || |||||||||||| |||||| |||||||    
T  40933234 ttcagagacgaaaattcaaataacttatatttgcagagacaaaagacctatttaa 40933180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 112 - 181
Target Start/End: Complemental strand, 9632395 - 9632326
Alignment:
Q  112 gattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagccaa 181  Q
    ||||| ||||||||| ||||||||||||||| ||||| |||||||  ||| |||||| ||||||||||||    
T  9632395 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaaggacaaaagacctatttaagccaa 9632326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 111 - 180
Target Start/End: Original strand, 23424828 - 23424897
Alignment:
Q  111 tgattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagcca 180  Q
    |||||| ||||||||| |||||||||||||||  |||| ||||||||  ||||||||| |||||||||||    
T  23424828 tgattagtaacttcagggacgaaaattcaaatggcctatatttgcaggaacgaaagacatatttaagcca 23424897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 111 - 176
Target Start/End: Original strand, 27857058 - 27857123
Alignment:
Q  111 tgattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaa 176  Q
    |||||| ||||||||| |||||||||||||||  |||| |||||||| |||||||||| |||||||    
T  27857058 tgattagtaacttcagggacgaaaattcaaatggcctatatttgcagggacgaaagacatatttaa 27857123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 112 - 180
Target Start/End: Original strand, 24529973 - 24530041
Alignment:
Q  112 gattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagcca 180  Q
    ||||| |||||||||  |||||||||||||| ||||| ||||||||  ||||||||| |||||||||||    
T  24529973 gattagtaacttcagtaacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaagcca 24530041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 113 - 176
Target Start/End: Complemental strand, 7459 - 7396
Alignment:
Q  113 attaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaa 176  Q
    |||| ||||||||| || |||||||||||| ||||| |||||||| |||||||||| |||||||    
T  7459 attagtaacttcagggaagaaaattcaaatgacctatatttgcagggacgaaagacatatttaa 7396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 112 - 179
Target Start/End: Original strand, 7710 - 7777
Alignment:
Q  112 gattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagcc 179  Q
    ||||| ||||||||  |||||||||||||||  |||| |||||||| |||||||||| ||||||||||    
T  7710 gattagtaacttcatggacgaaaattcaaatggcctatatttgcagggacgaaagacctatttaagcc 7777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 112 - 179
Target Start/End: Original strand, 9632620 - 9632687
Alignment:
Q  112 gattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagcc 179  Q
    ||||| ||||||||  ||||||||||||||| ||||| |||||||| ||| |||||| ||||||||||    
T  9632620 gattagtaacttcaaggacgaaaattcaaatgacctatatttgcagggacaaaagacctatttaagcc 9632687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 112 - 179
Target Start/End: Complemental strand, 11478212 - 11478145
Alignment:
Q  112 gattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagcc 179  Q
    ||||| ||||||||  ||||||||||||||| ||||| |||||||| ||||||| || ||||||||||    
T  11478212 gattagtaacttcaaggacgaaaattcaaatgacctatatttgcagggacgaaaaacctatttaagcc 11478145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 6 - 53
Target Start/End: Original strand, 15716083 - 15716130
Alignment:
Q  6 ttttatccctccaaatataggtcatttgaattttcgcctctaaagtta 53  Q
    |||||||||| ||||||||||||||||||||||||| |||| ||||||    
T  15716083 ttttatccctgcaaatataggtcatttgaattttcgtctctgaagtta 15716130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 112 - 179
Target Start/End: Complemental strand, 36623419 - 36623352
Alignment:
Q  112 gattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagcc 179  Q
    ||||| ||||||||| |||||||||||||||  |||| |||||||| ||||||| || ||||||||||    
T  36623419 gattagtaacttcagggacgaaaattcaaatggcctatatttgcagggacgaaaaacatatttaagcc 36623352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 112 - 179
Target Start/End: Complemental strand, 40525574 - 40525507
Alignment:
Q  112 gattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagcc 179  Q
    ||||| ||||||||| ||||||||||||||| || || ||||||||  ||||||||| ||||||||||    
T  40525574 gattagtaacttcagggacgaaaattcaaatgacatatatttgcaggaacgaaagacttatttaagcc 40525507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 112 - 178
Target Start/End: Complemental strand, 22763662 - 22763596
Alignment:
Q  112 gattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagc 178  Q
    ||||| ||||||||| ||||||||||||||| ||||| |||||||  ||||||| || |||||||||    
T  22763662 gattagtaacttcagggacgaaaattcaaatgacctatatttgcaaggacgaaatacctatttaagc 22763596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 113 - 179
Target Start/End: Original strand, 36623671 - 36623737
Alignment:
Q  113 attaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagcc 179  Q
    |||| ||| ||||| |||||||||||||||  |||| |||||||| |||||||||| ||||||||||    
T  36623671 attagtaatttcagggacgaaaattcaaatggcctatatttgcagggacgaaagacatatttaagcc 36623737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 113 - 179
Target Start/End: Complemental strand, 43866777 - 43866711
Alignment:
Q  113 attaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagcc 179  Q
    |||| ||| ||||| |||||||||||||||  |||| |||||||| |||||||||| ||||||||||    
T  43866777 attagtaatttcagggacgaaaattcaaatggcctatatttgcagggacgaaagacatatttaagcc 43866711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 112 - 181
Target Start/End: Original strand, 547752 - 547821
Alignment:
Q  112 gattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagccaa 181  Q
    ||||| |||||| || ||||||||||||||| | ||| |||||||| |||||||||  ||||||||||||    
T  547752 gattagtaactttagggacgaaaattcaaatgatctatatttgcagggacgaaagatctatttaagccaa 547821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 112 - 181
Target Start/End: Original strand, 38600267 - 38600336
Alignment:
Q  112 gattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagccaa 181  Q
    ||||| ||||||||| ||||||| ||||||| ||||| |||||||| |||||||  | ||||||||||||    
T  38600267 gattagtaacttcagggacgaaatttcaaatgacctatatttgcagggacgaaatgcctatttaagccaa 38600336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 112 - 177
Target Start/End: Complemental strand, 41801883 - 41801818
Alignment:
Q  112 gattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaag 177  Q
    ||||| |||||||||  |||||||||||||| ||||| |||||||| ||||||| || ||||||||    
T  41801883 gattagtaacttcaggaacgaaaattcaaatgacctatatttgcagggacgaaaaacatatttaag 41801818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 112 - 176
Target Start/End: Complemental strand, 20096087 - 20096023
Alignment:
Q  112 gattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaa 176  Q
    ||||| ||||||||| ||| ||||||||||| || || |||||||| |||||||||| |||||||    
T  20096087 gattagtaacttcagggacaaaaattcaaatgacatatatttgcagggacgaaagacctatttaa 20096023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 112 - 168
Target Start/End: Original strand, 20096341 - 20096397
Alignment:
Q  112 gattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagac 168  Q
    ||||| ||||||||| |||||||||||||||  |||| |||||||| ||||||||||    
T  20096341 gattagtaacttcagggacgaaaattcaaatggcctatatttgcagggacgaaagac 20096397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 113 - 181
Target Start/End: Complemental strand, 23424578 - 23424510
Alignment:
Q  113 attaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagccaa 181  Q
    |||| ||||||||| ||| ||||||||||| ||||| |||| ||| || ||||||| ||||||||||||    
T  23424578 attagtaacttcagggacaaaaattcaaatgacctatatttacagggatgaaagacctatttaagccaa 23424510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 113 - 177
Target Start/End: Original strand, 37343100 - 37343164
Alignment:
Q  113 attaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaag 177  Q
    |||| ||| ||||| ||||||||||||||| ||||| |||||||| | |||||||| ||||||||    
T  37343100 attagtaatttcagggacgaaaattcaaatgacctatatttgcaggggcgaaagacatatttaag 37343164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 111 - 179
Target Start/End: Original strand, 40525823 - 40525891
Alignment:
Q  111 tgattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagcc 179  Q
    |||||| ||| ||||| ||||||||||||||||||||| |||| ||| |||| ||||  ||||||||||    
T  40525823 tgattagtaatttcagggacgaaaattcaaataacctatatttacagggacggaagatatatttaagcc 40525891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 112 - 179
Target Start/End: Complemental strand, 25287859 - 25287792
Alignment:
Q  112 gattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagcc 179  Q
    ||||| ||||||||| |||||||||||||||  || | |||| ||| |||||||||| ||||||||||    
T  25287859 gattagtaacttcagggacgaaaattcaaatggccaatatttacagggacgaaagacatatttaagcc 25287792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 112 - 179
Target Start/End: Complemental strand, 29190227 - 29190160
Alignment:
Q  112 gattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagcc 179  Q
    ||||| |||||||||||||||||||||| ||  |||| |||||||| || ||||||  ||||||||||    
T  29190227 gattagtaacttcagagacgaaaattcagatggcctatatttgcagggaggaaagatatatttaagcc 29190160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 10 - 53
Target Start/End: Original strand, 29190370 - 29190413
Alignment:
Q  10 atccctccaaatataggtcatttgaattttcgcctctaaagtta 53  Q
    |||||| ||||||||||||||||||||||||| | |||||||||    
T  29190370 atccctgcaaatataggtcatttgaattttcgtccctaaagtta 29190413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 179
Target Start/End: Complemental strand, 23514070 - 23514021
Alignment:
Q  130 cgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagcc 179  Q
    ||||||||||||| | ||  ||||||||||||||||||| ||||||||||    
T  23514070 cgaaaattcaaatgaactttatttgcagagacgaaagacttatttaagcc 23514021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 112 - 181
Target Start/End: Complemental strand, 27436630 - 27436561
Alignment:
Q  112 gattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagccaa 181  Q
    ||||| ||||||||| ||||||||||||||  ||||| |||||||| || ||||  | ||||||||||||    
T  27436630 gattagtaacttcagggacgaaaattcaaacgacctatatttgcagggatgaaatgcatatttaagccaa 27436561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 112 - 181
Target Start/End: Original strand, 43867028 - 43867097
Alignment:
Q  112 gattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagccaa 181  Q
    ||||| ||||||||  |||||||||||||||   ||| |||||||| ||||||| || ||||||||||||    
T  43867028 gattagtaacttcatggacgaaaattcaaatggtctatatttgcagggacgaaaaacatatttaagccaa 43867097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 116 - 176
Target Start/End: Complemental strand, 13566473 - 13566413
Alignment:
Q  116 aataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaa 176  Q
    ||||||||||||||| |||||||||||   ||  |||||||| |||||||||| |||||||    
T  13566473 aataacttcagagacaaaaattcaaatgtactgtatttgcagggacgaaagacctatttaa 13566413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 112 - 176
Target Start/End: Original strand, 29190476 - 29190540
Alignment:
Q  112 gattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaa 176  Q
    ||||| ||||||||||||  |||||||||||   ||| |||||||| |||||||||| |||||||    
T  29190476 gattagtaacttcagagataaaaattcaaatggtctatatttgcagggacgaaagacctatttaa 29190540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 112 - 168
Target Start/End: Complemental strand, 38619865 - 38619809
Alignment:
Q  112 gattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagac 168  Q
    ||||| ||||||||| ||||||||||||||| | ||| ||||||||  |||||||||    
T  38619865 gattagtaacttcagggacgaaaattcaaatgatctatatttgcaggaacgaaagac 38619809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 109; Significance: 7e-55; HSPs: 55)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 11 - 243
Target Start/End: Original strand, 7612567 - 7612803
Alignment:
Q  11 tccctccaaatataggtcatttgaattttcgcctctaaagtta----tcctttcattttgctattgtaaatattaatcatttaaaaaatggtcctaatta 106  Q
    ||||| |||||||||  |||||||||||||| | || ||||||    | |||||||||||  |||| ||||||||||||||| |||||||||||||||||    
T  7612567 tccctgcaaatatagaccatttgaattttcgtccctgaagttactaattctttcattttgtcattgcaaatattaatcatttgaaaaatggtcctaatta 7612666  T
Q  107 catctgattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagccaaccacctcactcaatcatcacttgcc 206  Q
    |||||||||| ||| | ||| ||||||||||||||| || || |||||||| |||||||||| ||||||||  ||||||||| | |||||||||||||||    
T  7612667 catctgattagtaattccagggacgaaaattcaaatgacttatatttgcagggacgaaagacctatttaag-aaaccacctcgcccaatcatcacttgcc 7612765  T
Q  207 acatgg-caccacgtcgctaatgacaacccacctcagc 243  Q
    |||||| ||||||||||||||||||| |||||||||||    
T  7612766 acatggacaccacgtcgctaatgacagcccacctcagc 7612803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 60 - 243
Target Start/End: Original strand, 31879529 - 31879713
Alignment:
Q  60 cattttgctattgtaaatattaatcatttaaaaaatggtcctaattacatctgattaataacttcagagacgaaaattcaaataacctaaatttgcagag 159  Q
    |||||||| |||| |||||||||| |||| ||||||||||||||||||||||||| | ||||||||| ||||||||||||||| ||||| |||| || ||    
T  31879529 cattttgccattgcaaatattaataatttgaaaaatggtcctaattacatctgataattaacttcagggacgaaaattcaaatgacctatatttccaaag 31879628  T
Q  160 acgaaagacgtatttaagccaaccacctcactcaatcatcacttgccacat-ggcaccacgtcgctaatgacaacccacctcagc 243  Q
    ||||||||| ||||||||||||||||||| | ||||||||||||| ||||| ||||||||| ||||||||||| |||||||||||    
T  31879629 acgaaagacctatttaagccaaccacctcgcccaatcatcacttggcacatgggcaccacgccgctaatgacagcccacctcagc 31879713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 54 - 231
Target Start/End: Complemental strand, 3586529 - 3586351
Alignment:
Q  54 tcctttcattttgctattgtaaatattaatcatttaaaaaatggtcctaattacatctgattaataacttcagagacgaaaattcaaataacctaaattt 153  Q
    ||||| |||||||| |||| |||||||||||||||||||||||||| |||||||||||||||| |||||| || ||||||||||||||| ||||| ||||    
T  3586529 tccttccattttgccattgcaaatattaatcatttaaaaaatggtcataattacatctgattagtaactttagggacgaaaattcaaatgacctatattt 3586430  T
Q  154 gcagagacgaaagacgtatttaagccaaccacctcactcaatcatcacttgccacat-ggcaccacgtcgctaatgaca 231  Q
    | || |||||||||| ||||||||||||||||||| |  ||||||||||| |||||| |||||||||||||||||||||    
T  3586429 gtagggacgaaagacctatttaagccaaccacctcgcctaatcatcacttaccacatgggcaccacgtcgctaatgaca 3586351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 17 - 243
Target Start/End: Original strand, 26542641 - 26542873
Alignment:
Q  17 caaatataggtcatttgaattttcgcctctaaagtta----tcctttcattttgctattgtaaatatt-aatcatttaaaaaatggtcctaattacatct 111  Q
    |||||||| |||||||||||||||| | || ||||||    || ||||| | ||| | || ||||||| |||||||| |||||| |||||||||||||||    
T  26542641 caaatatatgtcatttgaattttcgtccctgaagttactaatcatttcaatctgccactgcaaatatttaatcatttgaaaaatcgtcctaattacatct 26542740  T
Q  112 gattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagccaaccacctcactcaatcatcacttgccacat- 210  Q
    ||||| ||||||||| ||||||||||||||| | ||| ||||||||| ||||||||| ||||||||||||| || |  | |||||||||||||||||||     
T  26542741 gattagtaacttcagggacgaaaattcaaatgatctatatttgcagatacgaaagacctatttaagccaacaactttgcccaatcatcacttgccacatg 26542840  T
Q  211 ggcaccacgtcgctaatgacaacccacctcagc 243  Q
    ||||||||||||||||||||| |||||||||||    
T  26542841 ggcaccacgtcgctaatgacagcccacctcagc 26542873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 74 - 231
Target Start/End: Original strand, 23291830 - 23291988
Alignment:
Q  74 aaatattaatcatttaaaaaatggtcctaattacatctgattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatt 173  Q
    ||||||||||||||| |    |||||||||||||||||||||| ||||||||| ||||||||||||||| ||||| |||||||| || ||||||| ||||    
T  23291830 aaatattaatcatttgacttttggtcctaattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcagggatgaaagacctatt 23291929  T
Q  174 taagccaaccacctcactcaatcatcacttgccacat-ggcaccacgtcgctaatgaca 231  Q
    ||||| ||||||||| ||||||||||||||||||||| |||||||||||||||||||||    
T  23291930 taagcaaaccacctctctcaatcatcacttgccacatgggcaccacgtcgctaatgaca 23291988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 11 - 240
Target Start/End: Complemental strand, 3299924 - 3299690
Alignment:
Q  11 tccctccaaatataggtcatttgaattttcgcctctaaagtta----tcctttcattttgctattgtaaatattaatcatttaaaaaatggtcctaatta 106  Q
    ||||| ||||||||||||||||||||||||| |  | ||||||    ||||| || | ||| |||| ||||||||||||||| ||||||||| |||||||    
T  3299924 tccctgcaaatataggtcatttgaattttcgtccttgaagttactaatccttccaatctgccattgcaaatattaatcatttgaaaaatggttctaatta 3299825  T
Q  107 catctgattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagccaaccacctcactcaatcatcacttgcc 206  Q
    |||||||||| ||||||||  || |||||||||||| |||||  ||||||| ||||||| || ||| |||||||| ||||||   ||||||||||||| |    
T  3299824 catctgattagtaacttcatggatgaaaattcaaatgacctatgtttgcagggacgaaatacctatctaagccaatcacctcgtccaatcatcacttgtc 3299725  T
Q  207 acat-ggcaccacgtcgctaatgacaacccacctc 240  Q
    |||| |||||||||| |||||||||| ||||||||    
T  3299724 acatgggcaccacgttgctaatgacagcccacctc 3299690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 74 - 243
Target Start/End: Original strand, 32337650 - 32337820
Alignment:
Q  74 aaatattaatcatttaaaaaatggtcctaattacatctgattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatt 173  Q
    ||||||||||||||| |    ||| |||||||||||||||||| ||||||||||||||||||||||||| ||||| |||||||| || ||||||| ||||    
T  32337650 aaatattaatcatttgacttttgggcctaattacatctgattagtaacttcagagacgaaaattcaaatgacctatatttgcagggatgaaagacctatt 32337749  T
Q  174 taagccaaccacctcactcaatcatcacttgccacat-ggcaccacgtcgctaatgacaacccacctcagc 243  Q
    ||||| |||||||||   ||||||||||||||||||| |||||||| | |||||||||| |||||||||||    
T  32337750 taagcaaaccacctcgtccaatcatcacttgccacatgggcaccacattgctaatgacagcccacctcagc 32337820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 18 - 243
Target Start/End: Complemental strand, 1066497 - 1066267
Alignment:
Q  18 aaatataggtcatttgaattttcgcctctaaagtta----tcctttcattttgctattgtaaatattaatcatttaaaaaatggtcctaattacatctga 113  Q
    |||||||| ||||||||||||||| | || ||||||    |  || |||||||| |||| ||||||||||||||| |||||| ||| |||||| || |||    
T  1066497 aaatatagatcatttgaattttcgtccctgaagttactaatatttccattttgccattgcaaatattaatcatttgaaaaatagtcataattatatttga 1066398  T
Q  114 ttaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagccaaccacctcactcaatcatcacttgccacat-gg 212  Q
    ||| ||||||  | || |||||||||||| ||||| |||||||  ||||||| || | ||||||||||||||||| | ||||||||||||||||||| ||    
T  1066397 ttagtaacttttgggatgaaaattcaaatgacctatatttgcaaggacgaaaaacctttttaagccaaccacctcgcccaatcatcacttgccacatggg 1066298  T
Q  213 caccacgtcgctaatgacaacccacctcagc 243  Q
    ||||| ||||||||||||| |||||||||||    
T  1066297 caccatgtcgctaatgacagcccacctcagc 1066267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 11 - 243
Target Start/End: Original strand, 13480227 - 13480464
Alignment:
Q  11 tccctccaaatataggtcatttgaattttcgcctctaaagtta----tcctttcattttgctattgtaaatattaatcatttaaaaaatggtcctaatta 106  Q
    ||||| |||||||||| |||||||||||||| | || ||||||    ||||| || | |||   || ||||||||||||||| |    ||||||||||||    
T  13480227 tccctgcaaatataggccatttgaattttcgtccctgaagttactaatccttccaatctgcccctgcaaatattaatcatttgacttttggtcctaatta 13480326  T
Q  107 catctgattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagccaaccacctcactcaatcatcacttgcc 206  Q
    ||||| |||| ||||||||| ||||||||||||||| ||||| |||||||| || |||| || ||||||||| |||||||   | |||||||||||||||    
T  13480327 catctaattagtaacttcagggacgaaaattcaaatgacctatatttgcagggatgaaaaacctatttaagcaaaccaccaagcccaatcatcacttgcc 13480426  T
Q  207 acat-ggcaccacgtcgctaatgacaacccacctcagc 243  Q
    |||| ||||||||||||||||||||| |||||||||||    
T  13480427 acatgggcaccacgtcgctaatgacagcccacctcagc 13480464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 74 - 243
Target Start/End: Complemental strand, 5064633 - 5064463
Alignment:
Q  74 aaatattaatcatttaaaaaatggtcctaattacatctgattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatt 173  Q
    ||||||||||||||| |    ||||||||||||||||| |||| ||||||||| ||||||||||||||| | ||| |||||||| || ||||||| ||||    
T  5064633 aaatattaatcatttgacttttggtcctaattacatctaattagtaacttcagggacgaaaattcaaatgatctatatttgcagggatgaaagacctatt 5064534  T
Q  174 taagccaaccacctcactcaatcatcacttgccacat-ggcaccacgtcgctaatgacaacccacctcagc 243  Q
    ||||  ||||||||| | ||||||||||||||||||| |||||||||||||||||||||  ||||||||||    
T  5064533 taaggaaaccacctcgcccaatcatcacttgccacatgggcaccacgtcgctaatgacagtccacctcagc 5064463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 74 - 243
Target Start/End: Original strand, 22493966 - 22494136
Alignment:
Q  74 aaatattaatcatttaaaaaatggtcctaattacatctgattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatt 173  Q
    ||||||||||||||| |    ||||||||||||||| |||||| ||||||||| ||||||||||||||||||||| |||||||| || ||||||| ||||    
T  22493966 aaatattaatcatttgacttttggtcctaattacatttgattagtaacttcagggacgaaaattcaaataacctatatttgcagggatgaaagacttatt 22494065  T
Q  174 taagccaaccacctcactcaatcatcacttgccacat-ggcaccacgtcgctaatgacaacccacctcagc 243  Q
    ||||  |||||||||  |||||||||||||||||||| ||||||| || ||||||||||  ||||||||||    
T  22494066 taagtaaaccacctcgttcaatcatcacttgccacatgggcaccatgttgctaatgacagtccacctcagc 22494136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 95 - 243
Target Start/End: Complemental strand, 21880641 - 21880492
Alignment:
Q  95 tggtcctaattacatctgattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagccaaccacctcactcaa 194  Q
    |||||||||||||||||||||| ||||||||| ||||||||||||||| ||||| ||||| || || ||||||| | ||||||| ||||||| | | |||    
T  21880641 tggtcctaattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgtagggatgaaagacctgtttaagcaaaccaccacgcccaa 21880542  T
Q  195 tcatcacttgccacat-ggcaccacgtcgctaatgacaacccacctcagc 243  Q
    |||||||||||||||| |||||||||||| |||||||| |||||||||||    
T  21880541 tcatcacttgccacatgggcaccacgtcggtaatgacagcccacctcagc 21880492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 17 - 243
Target Start/End: Original strand, 20774114 - 20774337
Alignment:
Q  17 caaatataggtcatttgaattttcgcctctaaagttat----cctttcattttgctattgtaaatattaatcatttaaaaaatggtcctaattacatctg 112  Q
    |||||||| |||||||||||||||| |  | |||||||    ||||||||||||  |||| ||||||||||||||| |||||||||||||||||||||||    
T  20774114 caaatatatgtcatttgaattttcgtccttgaagttattaatcctttcattttgtcattgcaaatattaatcatttgaaaaatggtcctaattacatctg 20774213  T
Q  113 attaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagccaaccacctcactcaatcatcacttgccacatgg 212  Q
    |||| ||| ||||  ||||||||||||||| || || ||||| || ||  |||||| ||||||| ||||||||||| | |||||| ||||||      ||    
T  20774214 attagtaatttcatggacgaaaattcaaatgacttatatttg-agggattaaagacctatttaaaccaaccacctcgcccaatcaccacttg------gg 20774306  T
Q  213 caccacgtcgctaatgacaacccacctcagc 243  Q
    ||||||||||||||||||| |||| ||||||    
T  20774307 caccacgtcgctaatgacagcccaactcagc 20774337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 74 - 243
Target Start/End: Original strand, 26503450 - 26503605
Alignment:
Q  74 aaatattaatcatttaaaaaatggtcctaattacatctgattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatt 173  Q
    |||||| |||||||| ||||||||||||||||||||||||||| ||||||||| ||||||||||||||| ||||| |||||||| ||| |||||| ||||    
T  26503450 aaatataaatcatttgaaaaatggtcctaattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcagtgac-aaagacttatt 26503548  T
Q  174 taagccaaccacctcactcaatcatcacttgccacatggcaccacgtcgctaatgacaacccacctcagc 243  Q
    ||||||||||||||| | |||||||             ||||||||||||||||||||||||||||||||    
T  26503549 taagccaaccacctcgcccaatcat-------------gcaccacgtcgctaatgacaacccacctcagc 26503605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 74 - 228
Target Start/End: Complemental strand, 20561225 - 20561070
Alignment:
Q  74 aaatattaatcatttaaaaaatggtcctaattacatctgattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatt 173  Q
    ||||||||||||||| |    |||||||||||||||||||||| ||||||||  ||||||||||||||| ||||| |||||||| || ||||||| ||||    
T  20561225 aaatattaatcatttgacttttggtcctaattacatctgattagtaacttcaaggacgaaaattcaaatgacctatatttgcagggatgaaagacatatt 20561126  T
Q  174 taagccaaccacctcactcaatcatcacttgccacat-ggcaccacgtcgctaatg 228  Q
    ||||| ||||||||| | ||||||||||||||||||| |||||||  |||||||||    
T  20561125 taagcaaaccacctcgcccaatcatcacttgccacatgggcaccaaatcgctaatg 20561070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 53 - 186
Target Start/End: Original strand, 31386864 - 31386996
Alignment:
Q  53 atcctttcattttgctattgtaaatattaatcatttaaaaaatggtcctaattacatctgattaataacttcagagacgaaaattcaaataacctaaatt 152  Q
    |||||| |||||||| |||| ||||||||||||||| ||||||| ||||||||||||||| ||| ||||||||| || |||||||||||| ||||| |||    
T  31386864 atccttccattttgcaattgcaaatattaatcatttgaaaaatgatcctaattacatctggttagtaacttcag-gatgaaaattcaaatgacctatatt 31386962  T
Q  153 tgcagagacgaaagacgtatttaagccaaccacc 186  Q
    ||||  ||| |||||| |||||||||||||||||    
T  31386963 tgcaaggacaaaagacctatttaagccaaccacc 31386996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 74 - 176
Target Start/End: Complemental strand, 19296525 - 19296423
Alignment:
Q  74 aaatattaatcatttaaaaaatggtcctaattacatctgattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatt 173  Q
    ||||||||||||||| ||||||||||||||||||||||||||| ||||||||  || |||||||||||| ||||| |||||||| ||||| |||| ||||    
T  19296525 aaatattaatcatttgaaaaatggtcctaattacatctgattagtaacttcatggatgaaaattcaaatgacctatatttgcagggacgatagacctatt 19296426  T
Q  174 taa 176  Q
    |||    
T  19296425 taa 19296423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 144 - 243
Target Start/End: Original strand, 15819645 - 15819745
Alignment:
Q  144 acctaaatttgcagagacgaaagacgtatttaagccaaccacctcactcaatcatcacttgccacat-ggcaccacgtcgctaatgacaacccacctcag 242  Q
    ||||| |||||||| || |||| || ||||||||||||||| ||||| ||||||||||||||||||| ||||| ||||||||||||||| ||||||||||    
T  15819645 acctatatttgcagggatgaaaaacctatttaagccaaccatctcacccaatcatcacttgccacatgggcactacgtcgctaatgacagcccacctcag 15819744  T
Q  243 c 243  Q
    |    
T  15819745 c 15819745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 113 - 179
Target Start/End: Original strand, 20774399 - 20774465
Alignment:
Q  113 attaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagcc 179  Q
    |||| ||||||||||||||||||| ||||| ||||| ||||||||||||||||||| ||||||||||    
T  20774399 attagtaacttcagagacgaaaatacaaatgacctatatttgcagagacgaaagacctatttaagcc 20774465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 95 - 168
Target Start/End: Complemental strand, 737974 - 737901
Alignment:
Q  95 tggtcctaattacatctgattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagac 168  Q
    |||||||||||||||||||||| |||||||||  | |||||||||||| ||||| |||||||| ||||||||||    
T  737974 tggtcctaattacatctgattagtaacttcaggaatgaaaattcaaatgacctatatttgcagggacgaaagac 737901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 111 - 179
Target Start/End: Complemental strand, 20560996 - 20560928
Alignment:
Q  111 tgattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagcc 179  Q
    |||||||||||| ||| ||||||||||||||| ||||| |||||||| |||||||||| ||||||||||    
T  20560996 tgattaataactacagggacgaaaattcaaatgacctatatttgcagggacgaaagacatatttaagcc 20560928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 112 - 179
Target Start/End: Original strand, 15819807 - 15819874
Alignment:
Q  112 gattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagcc 179  Q
    ||||| ||||||||| ||||||||||||||| ||||| |||||||| |||||||||| ||||||||||    
T  15819807 gattagtaacttcagggacgaaaattcaaatgacctatatttgcagggacgaaagacatatttaagcc 15819874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 113 - 180
Target Start/End: Complemental strand, 21544584 - 21544517
Alignment:
Q  113 attaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagcca 180  Q
    |||| ||||||||||||||||||||||||| ||||| |||||||| |||||||||  |||||||||||    
T  21544584 attagtaacttcagagacgaaaattcaaatgacctatatttgcagggacgaaagatctatttaagcca 21544517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 112 - 181
Target Start/End: Original strand, 738014 - 738083
Alignment:
Q  112 gattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagccaa 181  Q
    ||||| ||||||||  ||||||||||||||| ||||| |||||||| |||||||||| ||||||||||||    
T  738014 gattagtaacttcatggacgaaaattcaaatgacctatatttgcagggacgaaagacatatttaagccaa 738083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 112 - 181
Target Start/End: Complemental strand, 20994886 - 20994817
Alignment:
Q  112 gattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagccaa 181  Q
    ||||| ||||||||||||||||||||||||| | ||| |||| ||| |||||||||| ||||||||||||    
T  20994886 gattagtaacttcagagacgaaaattcaaatgaactatatttacagggacgaaagacatatttaagccaa 20994817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 112 - 181
Target Start/End: Original strand, 23292061 - 23292130
Alignment:
Q  112 gattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagccaa 181  Q
    ||||| ||||||||| ||||||||||||||| ||||| |||||||  |||||||||| ||||||||||||    
T  23292061 gattagtaacttcagggacgaaaattcaaatgacctatatttgcatggacgaaagacatatttaagccaa 23292130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 111 - 179
Target Start/End: Complemental strand, 3299627 - 3299559
Alignment:
Q  111 tgattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagcc 179  Q
    |||||| ||||||||  ||||||||||||||| || || ||||||||||||||||||| ||||||||||    
T  3299627 tgattagtaacttcatggacgaaaattcaaatgacttatatttgcagagacgaaagacctatttaagcc 3299559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 112 - 179
Target Start/End: Complemental strand, 13480275 - 13480208
Alignment:
Q  112 gattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagcc 179  Q
    ||||| ||||||||| |||||||||||||||  |||| |||||||| |||||||||| ||||||||||    
T  13480275 gattagtaacttcagggacgaaaattcaaatggcctatatttgcagggacgaaagacatatttaagcc 13480208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 112 - 179
Target Start/End: Original strand, 30234909 - 30234976
Alignment:
Q  112 gattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagcc 179  Q
    ||||| ||||||||| || ||||||||||| |||||| |||||||| |||||||||| ||||||||||    
T  30234909 gattagtaacttcagggatgaaaattcaaacaacctatatttgcagggacgaaagacatatttaagcc 30234976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 112 - 181
Target Start/End: Original strand, 5064652 - 5064721
Alignment:
Q  112 gattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagccaa 181  Q
    ||||| |||| |||| |||||||||||||||  |||| ||||||||||||||||||| ||||||| ||||    
T  5064652 gattagtaacctcagggacgaaaattcaaatggcctatatttgcagagacgaaagacatatttaaaccaa 5064721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 112 - 181
Target Start/End: Complemental strand, 8427267 - 8427198
Alignment:
Q  112 gattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagccaa 181  Q
    ||||| |||||| |||||||||||||||||| ||||| |||||||  || ||||||| ||||||||||||    
T  8427267 gattagtaacttgagagacgaaaattcaaatgacctatatttgcaaggatgaaagacatatttaagccaa 8427198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 113 - 178
Target Start/End: Original strand, 26542938 - 26543003
Alignment:
Q  113 attaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagc 178  Q
    |||| |||||||||||||||||| |||||| ||||| |||||||| |||||||||| || ||||||    
T  26542938 attagtaacttcagagacgaaaactcaaatgacctatatttgcagggacgaaagacctaattaagc 26543003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 118 - 179
Target Start/End: Original strand, 32337890 - 32337950
Alignment:
Q  118 taacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagcc 179  Q
    ||||||||| ||||||||||||||| ||||| |||||||| |||||||||| ||||||||||    
T  32337890 taacttcagggacgaaaattcaaatgacctatatttgcag-gacgaaagacatatttaagcc 32337950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 119 - 179
Target Start/End: Complemental strand, 3586271 - 3586212
Alignment:
Q  119 aacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagcc 179  Q
    ||||| |||||||||||||||||| ||||| |||||||| |||||||||| ||||||||||    
T  3586271 aactttagagacgaaaattcaaatgacctatatttgcag-gacgaaagacctatttaagcc 3586212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 112 - 180
Target Start/End: Original strand, 20995008 - 20995076
Alignment:
Q  112 gattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagcca 180  Q
    ||||| ||||||||| || |||||||||||| || |  ||||||||||||||||||| |||||||||||    
T  20995008 gattagtaacttcagggatgaaaattcaaatgacttctatttgcagagacgaaagacctatttaagcca 20995076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 112 - 180
Target Start/End: Complemental strand, 21880431 - 21880363
Alignment:
Q  112 gattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagcca 180  Q
    ||||| ||||||||||||||||||||||||| || || |||| |||  ||||||||| |||||||||||    
T  21880431 gattagtaacttcagagacgaaaattcaaatgacttatatttacaggaacgaaagacatatttaagcca 21880363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 112 - 179
Target Start/End: Complemental strand, 5064402 - 5064335
Alignment:
Q  112 gattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagcc 179  Q
    ||||| ||||||||| ||||||||||||||| || || |||| ||| |||||||||| ||||||||||    
T  5064402 gattagtaacttcagggacgaaaattcaaatgacttatatttacagggacgaaagacatatttaagcc 5064335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 112 - 179
Target Start/End: Original strand, 13480525 - 13480592
Alignment:
Q  112 gattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagcc 179  Q
    ||||| ||||||||| ||||||||||||||| ||||| |||| ||  |||||||||| ||||||||||    
T  13480525 gattagtaacttcagggacgaaaattcaaatgacctatatttacaaggacgaaagacatatttaagcc 13480592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 112 - 179
Target Start/End: Original strand, 16704626 - 16704693
Alignment:
Q  112 gattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagcc 179  Q
    ||||| ||||||||  |||||||||||||||  |||| |||||||| |||||||||| ||||||||||    
T  16704626 gattagtaacttcaaggacgaaaattcaaatggcctatatttgcagggacgaaagacctatttaagcc 16704693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 112 - 179
Target Start/End: Original strand, 26503671 - 26503738
Alignment:
Q  112 gattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagcc 179  Q
    ||||||||||||||  ||||||||||||||| || || |||||||| ||||||| || ||||||||||    
T  26503671 gattaataacttcatggacgaaaattcaaatgacttatatttgcagggacgaaaaacctatttaagcc 26503738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 112 - 178
Target Start/End: Original strand, 3299876 - 3299942
Alignment:
Q  112 gattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagc 178  Q
    ||||| ||||||||  ||||||||||||||| ||||| |||||||| ||||||| || |||||||||    
T  3299876 gattagtaacttcaaggacgaaaattcaaatgacctatatttgcagggacgaaatacatatttaagc 3299942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 113 - 179
Target Start/End: Complemental strand, 7612614 - 7612548
Alignment:
Q  113 attaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagcc 179  Q
    |||| ||||||||| |||||||||||||||   ||| |||||||| |||||||||| ||||||||||    
T  7612614 attagtaacttcagggacgaaaattcaaatggtctatatttgcagggacgaaagacctatttaagcc 7612548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 112 - 181
Target Start/End: Original strand, 21880681 - 21880750
Alignment:
Q  112 gattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagccaa 181  Q
    ||||| ||||||||| |||||||||||||||  | || ||||| || |||||||||| ||||||||||||    
T  21880681 gattagtaacttcagggacgaaaattcaaattgcatatatttggagggacgaaagacctatttaagccaa 21880750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 111 - 179
Target Start/End: Original strand, 16706967 - 16707035
Alignment:
Q  111 tgattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagcc 179  Q
    |||||| ||||||||  ||||||||||||||| ||||| |||||||| ||| |||||| || |||||||    
T  16706967 tgattagtaacttcaaggacgaaaattcaaatgacctatatttgcagggaccaaagacctaattaagcc 16707035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 192 - 243
Target Start/End: Original strand, 31393386 - 31393438
Alignment:
Q  192 caatcatcacttgccacatg-gcaccacgtcgctaatgacaacccacctcagc 243  Q
    |||||||||||||||||||| || ||| ||||||||||||| |||||||||||    
T  31393386 caatcatcacttgccacatgagcgccatgtcgctaatgacagcccacctcagc 31393438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 112 - 176
Target Start/End: Complemental strand, 32337631 - 32337567
Alignment:
Q  112 gattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaa 176  Q
    ||||| ||||||||| |||||||||||||||   ||| |||||||| |||||||||| |||||||    
T  32337631 gattagtaacttcagggacgaaaattcaaatggtctatatttgcagggacgaaagacctatttaa 32337567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 17 - 52
Target Start/End: Original strand, 3586236 - 3586271
Alignment:
Q  17 caaatataggtcatttgaattttcgcctctaaagtt 52  Q
    ||||||||||||||||||||||||| ||||||||||    
T  3586236 caaatataggtcatttgaattttcgtctctaaagtt 3586271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 10 - 53
Target Start/End: Complemental strand, 32337737 - 32337694
Alignment:
Q  10 atccctccaaatataggtcatttgaattttcgcctctaaagtta 53  Q
    |||||| ||||||||||||||||||||||||| |||| ||||||    
T  32337737 atccctgcaaatataggtcatttgaattttcgtctctgaagtta 32337694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 53
Target Start/End: Original strand, 3586423 - 3586465
Alignment:
Q  11 tccctccaaatataggtcatttgaattttcgcctctaaagtta 53  Q
    ||||| ||||||||||||||||||||||||| | |||||||||    
T  3586423 tccctacaaatataggtcatttgaattttcgtccctaaagtta 3586465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 112 - 166
Target Start/End: Original strand, 9607633 - 9607687
Alignment:
Q  112 gattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaag 166  Q
    ||||| ||||||||  ||||||||||||||| ||||| |||||||| ||||||||    
T  9607633 gattagtaacttcatggacgaaaattcaaatgacctatatttgcagggacgaaag 9607687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 111 - 181
Target Start/End: Original strand, 19039105 - 19039175
Alignment:
Q  111 tgattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagccaa 181  Q
    |||||| |||||||| ||   ||||||||||||||||| |||||||| ||| |||||  ||||||||||||    
T  19039105 tgattagtaacttcaaagtataaaattcaaataacctatatttgcagggactaaagatctatttaagccaa 19039175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 53
Target Start/End: Original strand, 21544537 - 21544579
Alignment:
Q  11 tccctccaaatataggtcatttgaattttcgcctctaaagtta 53  Q
    ||||| ||||||||||||||||||||||||| |||| ||||||    
T  21544537 tccctgcaaatataggtcatttgaattttcgtctctgaagtta 21544579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 112 - 178
Target Start/End: Complemental strand, 23291811 - 23291745
Alignment:
Q  112 gattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagc 178  Q
    ||||| ||||||||| || ||||||||||||  |||| ||||| || |||||||||| |||||||||    
T  23291811 gattagtaacttcagggatgaaaattcaaatggcctatatttgtagggacgaaagacatatttaagc 23291745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 17 - 53
Target Start/End: Original strand, 8427225 - 8427261
Alignment:
Q  17 caaatataggtcatttgaattttcgcctctaaagtta 53  Q
    ||||||||||||||||||||||||| |||| ||||||    
T  8427225 caaatataggtcatttgaattttcgtctctcaagtta 8427261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 112 - 176
Target Start/End: Complemental strand, 31879524 - 31879461
Alignment:
Q  112 gattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaa 176  Q
    ||||| ||||||| | ||||||||||||||| ||| | |||||||| |||||||||| |||||||    
T  31879524 gattagtaacttcggggacgaaaattcaaatgacc-atatttgcagggacgaaagacctatttaa 31879461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 103; Significance: 3e-51; HSPs: 40)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 17 - 243
Target Start/End: Complemental strand, 28310707 - 28310476
Alignment:
Q  17 caaatataggtcatttgaattttcgcctctaaagtta----tcctttcattttgctattgtaaatattaatcatttaaaaaatggtcctaattacatctg 112  Q
    |||||||||||||||||||| |||| | |||||||||    || || |||||||| |||| ||||||||||||||| |||||||||||||||||||||||    
T  28310707 caaatataggtcatttgaatcttcgaccctaaagttactaatctttccattttgccattgcaaatattaatcatttgaaaaatggtcctaattacatctg 28310608  T
Q  113 attaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagccaaccacctcactcaatcatcacttgccacat-g 211  Q
    |||| | || |||| ||| |||||||||||   ||| |||||||  | |  ||||| |||||||||| |||||||||||||||||||||||||||||| |    
T  28310607 attagttacgtcagggacaaaaattcaaatggtctatatttgcaaggtcacaagacctatttaagcccaccacctcactcaatcatcacttgccacatgg 28310508  T
Q  212 gcaccacgtcgctaatgacaacccacctcagc 243  Q
    | |||||||||||||||||| |||||||||||    
T  28310507 gaaccacgtcgctaatgacagcccacctcagc 28310476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 74 - 243
Target Start/End: Original strand, 33458002 - 33458172
Alignment:
Q  74 aaatattaatcatttaaaaaatggtcctaattacatctgattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatt 173  Q
    ||||||||||||||| ||||||||| ||||||||||||||||| |||||| |||||||||||||||||| ||||| ||||| || |||||||||| ||||    
T  33458002 aaatattaatcatttgaaaaatggttctaattacatctgattagtaactttagagacgaaaattcaaatgacctatatttgtagggacgaaagacctatt 33458101  T
Q  174 taagccaaccacctcactcaatcatcacttgccacat-ggcaccacgtcgctaatgacaacccacctcagc 243  Q
    ||| ||||||||||| |||||||||||||||| | || ||||||| ||||||||||||| |||||||||||    
T  33458102 taacccaaccacctcgctcaatcatcacttgcaatatgggcaccatgtcgctaatgacagcccacctcagc 33458172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 18 - 242
Target Start/End: Original strand, 30890233 - 30890462
Alignment:
Q  18 aaatataggtcatttgaattttcgcctctaaagtta----tcctttcattttgctattgtaaatattaatcatttaaaaaatggtcctaattacatctga 113  Q
    |||||||| ||||||||||||||  |||| ||||||    || ||  ||||||| |||||||||||||||||||| ||||||||||||||||||||||||    
T  30890233 aaatatagatcatttgaattttcatctctgaagttactaatctttctattttgccattgtaaatattaatcatttgaaaaatggtcctaattacatctga 30890332  T
Q  114 ttaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagccaaccacctcactcaatcatcacttgccacat-gg 212  Q
    ||| ||||||||| ||||||||||||||| || || |||||| | ||||||| |  |||||||| |||||||||| | |||||||  |||||||||| ||    
T  30890333 ttagtaacttcagggacgaaaattcaaatgacttatatttgctgggacgaaatatctatttaagtcaaccacctcgcccaatcatatcttgccacatggg 30890432  T
Q  213 caccacgtcgctaatgacaacccacctcag 242  Q
    ||||||| ||||||||||| ||||||||||    
T  30890433 caccacgccgctaatgacagcccacctcag 30890462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 11 - 240
Target Start/End: Original strand, 30803865 - 30804100
Alignment:
Q  11 tccctccaaatataggtcatttgaattttcgcctctaaagtta----tcctttcattttgctattgtaaatattaatcatttaaaaaatggtcctaatta 106  Q
    ||||| ||| ||||||||||||||||||||| |||| ||||||    | ||| || | ||  | || |||||||||||| || |||||||||||||||||    
T  30803865 tcccttcaactataggtcatttgaattttcgtctctgaagttactaattcttccaatctgtcactgcaaatattaatcaattgaaaaatggtcctaatta 30803964  T
Q  107 catctgattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagccaaccacctcactcaatcatcacttgcc 206  Q
    |||||||||| ||||||| | ||||||||||||||| ||||| |||||||| ||||||| || |||||||||||||||||||   |||||||||||||||    
T  30803965 catctgattagtaacttccgggacgaaaattcaaatgacctatatttgcagggacgaaaaacctatttaagccaaccacctcgtccaatcatcacttgcc 30804064  T
Q  207 aca--tggcaccacgtcgctaatgacaacccacctc 240  Q
    |||   ||||||||||||||||||||| ||||||||    
T  30804065 acactgggcaccacgtcgctaatgacagcccacctc 30804100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 74 - 236
Target Start/End: Original strand, 33989100 - 33989262
Alignment:
Q  74 aaatattaatcatttaaaaaatggtcctaattacatctgattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatt 173  Q
    |||||||||| |||| ||||||||||||||||||||||||||| ||||||||| ||||||||||||||| ||||| |||||||| ||||||| || ||||    
T  33989100 aaatattaattatttgaaaaatggtcctaattacatctgattagtaacttcag-gacgaaaattcaaatgacctatatttgcagggacgaaaaacctatt 33989198  T
Q  174 taagccaaccacctcactcaatcatcacttgccacat-ggcaccacgtcgctaatgacaaccca 236  Q
    |||||||||||| || | ||||||||||||||||||| |||||||||||||||| |||||||||    
T  33989199 taagccaaccacttcgcccaatcatcacttgccacatgggcaccacgtcgctaacgacaaccca 33989262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 18 - 242
Target Start/End: Complemental strand, 46670613 - 46670385
Alignment:
Q  18 aaatataggtcatttgaattttcgcctctaaagtta----tcctttcattttgctattgtaaatattaatcatttaaaaaatggtcctaattacatctga 113  Q
    |||||||||||||||||||||||  | || ||||||    | ||| |||||||  |||| |||||||||||||||||||||||||| |||||||||||||    
T  46670613 aaatataggtcatttgaattttcatccctgaagttactaattcttccattttgtcattgcaaatattaatcatttaaaaaatggtcataattacatctga 46670514  T
Q  114 ttaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagccaaccacctcactcaatcatcacttgccacatg-g 212  Q
    ||| ||||||||| || |||||||||||| || || ||||| || |||||||||  ||||||| ||||||||||  | |||||||||||||| ||||| |    
T  46670513 ttagtaacttcagggatgaaaattcaaatgacatatatttg-agggacgaaagatctatttaaaccaaccaccttgcccaatcatcacttgctacatgag 46670415  T
Q  213 caccacgtcgctaatgacaacccacctcag 242  Q
    |||||| |||||||||||||||||||||||    
T  46670414 caccacatcgctaatgacaacccacctcag 46670385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 74 - 243
Target Start/End: Original strand, 10749404 - 10749574
Alignment:
Q  74 aaatattaatcatttaaaaaatggtcctaattacatctgattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatt 173  Q
    ||||||||||||||| |    |||||||||||||||||||||| ||||||||| |||||||||| |||| ||||| |||||||| || ||||||| ||||    
T  10749404 aaatattaatcatttgacttttggtcctaattacatctgattagtaacttcagggacgaaaatttaaatgacctatatttgcagggatgaaagacctatt 10749503  T
Q  174 taagccaaccacctcactcaatcatcacttgccacatgg-caccacgtcgctaatgacaacccacctcagc 243  Q
     |||| ||||||||| ||||||||||||||||||||||| ||| |||||||||||||||||||||||||||    
T  10749504 aaagcaaaccacctcgctcaatcatcacttgccacatggacactacgtcgctaatgacaacccacctcagc 10749574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 74 - 243
Target Start/End: Original strand, 55036755 - 55036925
Alignment:
Q  74 aaatattaatcatttaaaaaatggtcctaattacatctgattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatt 173  Q
    |||||||||||||||||    |||||||||||| ||||||||| ||||||||| ||||||||||||||| ||||| |||||||| || ||||||| ||||    
T  55036755 aaatattaatcatttaacctttggtcctaattatatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcagggatgaaagacctatt 55036854  T
Q  174 taagccaaccacctcactcaatcatcacttgccacat-ggcaccacgtcgctaatgacaacccacctcagc 243  Q
    ||||| || ||||||  |||||||||||||||||||| |||||||||||||||||||||||| ||||||||    
T  55036855 taagcaaatcacctcgttcaatcatcacttgccacatgggcaccacgtcgctaatgacaaccgacctcagc 55036925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 78 - 241
Target Start/End: Original strand, 24576380 - 24576544
Alignment:
Q  78 attaatcatttaaaaaatggtcctaattacatctgattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaag 177  Q
    ||||||||||| ||||||| ||||||||||||||||||  ||||||||| ||||||||||||||| ||||| |||||||| ||||||| || ||||||||    
T  24576380 attaatcatttgaaaaatgatcctaattacatctgatttgtaacttcagggacgaaaattcaaatgacctatatttgcagggacgaaaaacttatttaag 24576479  T
Q  178 ccaaccacctcactcaatcatcacttgccacat-ggcaccacgtcgctaatgacaacccacctca 241  Q
    |||||||| |  | ||||||||||||||||||| |||||||| || |||||||||||||||||||    
T  24576480 ccaaccactttgcccaatcatcacttgccacatgggcaccacatcactaatgacaacccacctca 24576544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 95 - 243
Target Start/End: Complemental strand, 11313012 - 11312863
Alignment:
Q  95 tggtcctaattacatctgattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagccaaccacctcactcaa 194  Q
    |||||||||||||||||||||| ||||||||| ||||||||||||||| ||||| |||||||  || ||||||| ||||||||| ||||||||| | |||    
T  11313012 tggtcctaattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcaaggatgaaagacttatttaagcaaaccacctcgcccaa 11312913  T
Q  195 tcatcacttgccacatg-gcaccacgtcgctaatgacaacccacctcagc 243  Q
    ||||||||||||||||| |||||||||| ||||||||| |||||||||||    
T  11312912 tcatcacttgccacatgagcaccacgtcactaatgacatcccacctcagc 11312863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 71 - 240
Target Start/End: Complemental strand, 51279531 - 51279362
Alignment:
Q  71 tgtaaatattaatcatttaaaaaatggtcctaattacatctgattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgt 170  Q
    |||||||||||||||||| |    ||||| |||||||||||||||| ||||||||| ||||||||||||||| ||||| |||||||| || ||||| | |    
T  51279531 tgtaaatattaatcatttgacttttggtcataattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcag-gatgaaagtcct 51279433  T
Q  171 atttaagccaaccacctcactcaatcatcacttgccacat-ggcaccacgtcgctaatgacaacccacctc 240  Q
    |||||||| ||||||||| | ||||||||||||||||||| |||||||||||||||||||||  |||||||    
T  51279432 atttaagcaaaccacctcgcccaatcatcacttgccacatgggcaccacgtcgctaatgacagtccacctc 51279362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 71 - 243
Target Start/End: Original strand, 10997957 - 10998129
Alignment:
Q  71 tgtaaatattaatcatttaaaaaatggtcctaattacatctgattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgt 170  Q
    |||||||||||||||||| |    || ||||||||||||||||||| ||||||||  ||||||||||||||| || || |||||||| || ||||| | |    
T  10997957 tgtaaatattaatcatttgacttttgatcctaattacatctgattagtaacttcatggacgaaaattcaaatgacatatatttgcagggatgaaagtc-t 10998055  T
Q  171 atttaagccaaccacctcactcaatcatcacttgccacat-ggcaccacgtcgctaatgacaacccacctcagc 243  Q
    |||||||| ||||||||| || |||||||||||||||||| ||||||||||||||||||||| |||||||||||    
T  10998056 atttaagcaaaccacctcgctgaatcatcacttgccacatgggcaccacgtcgctaatgacagcccacctcagc 10998129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 11 - 243
Target Start/End: Complemental strand, 21300498 - 21300261
Alignment:
Q  11 tccctccaaatataggtcatttgaattttcgcctctaaagtta----tcctttcattttgctattgtaaatattaatcatttaaaaaatggtcctaatta 106  Q
    ||||| |||||||| || ||||||||||||| |||| ||||||    |||||||| | ||    |||||||||||||||||| |    ||| ||||||||    
T  21300498 tccctgcaaatatatgttatttgaattttcgtctctgaagttactaatcctttcagtctgtccctgtaaatattaatcatttgacttttggccctaatta 21300399  T
Q  107 catctgattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagccaaccacctcactcaatcatcacttgcc 206  Q
    |||||||||| ||||||||| || |||||||||||| ||||| |||||||| || ||||||| ||||||||| |||||| ||   |||||||||||||||    
T  21300398 catctgattagtaacttcagggatgaaaattcaaatgacctatatttgcagggatgaaagacctatttaagcaaaccacatcgtccaatcatcacttgcc 21300299  T
Q  207 acat-ggcaccacgtcgctaatgacaacccacctcagc 243  Q
    |||| |||||||| ||||||||||||  ||||||||||    
T  21300298 acatgggcaccacatcgctaatgacagtccacctcagc 21300261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 17 - 241
Target Start/End: Original strand, 40256899 - 40257127
Alignment:
Q  17 caaatataggtcatttgaattttcgcctctaaagtta----tcctttcattttgctattgtaaatattaatcatttaaaaaatggtcctaattacatctg 112  Q
    ||||||||||| ||||||||||||| | || ||||||    ||||| || | |||  ||| ||||||||||||||| |    ||||||||||||||||||    
T  40256899 caaatataggttatttgaattttcgtccctgaagttactaatccttccaatatgcccttgcaaatattaatcatttgacttttggtcctaattacatctg 40256998  T
Q  113 attaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagccaaccacctcactcaatcatcacttgccacat-g 211  Q
    ||||  ||||||||  |||||||||||||| ||||| |||||||| || ||||||| ||||||| | ||||||||| | ||||||||||||||||||| |    
T  40256999 attagcaacttcaggaacgaaaattcaaatgacctatatttgcagggatgaaagacctatttaaacaaaccacctcgcccaatcatcacttgccacatgg 40257098  T
Q  212 gcaccacgtcgctaatgacaacccacctca 241  Q
    |||||||||||| ||||||| |||||||||    
T  40257099 gcaccacgtcgc-aatgacagcccacctca 40257127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 97 - 243
Target Start/End: Original strand, 22129115 - 22129262
Alignment:
Q  97 gtcctaattacatctgattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagccaaccacctcactcaatc 196  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||| ||||| |||| ||| || ||||||| ||||||||| ||||||||| |  |||     
T  22129115 gtcctaattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttacagggatgaaagacttatttaagcaaaccacctcgcctaatt 22129214  T
Q  197 atcacttgccacat-ggcaccacgtcgctaatgacaacccacctcagc 243  Q
    |||||||||||||| ||||||| |||||||||||||  ||||||||||    
T  22129215 atcacttgccacatgggcaccatgtcgctaatgacagtccacctcagc 22129262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 17 - 173
Target Start/End: Complemental strand, 21255890 - 21255730
Alignment:
Q  17 caaatataggtcatttgaattttcgcctctaaagtta----tcctttcattttgctattgtaaatattaatcatttaaaaaatggtcctaattacatctg 112  Q
    ||||||||| ||||||||||||||| |  ||||||||    | ||| |||||||| |||||||||||||||||||| |||||||||||||||||||||||    
T  21255890 caaatatagatcatttgaattttcgtccataaagttactaatgcttccattttgccattgtaaatattaatcatttgaaaaatggtcctaattacatctg 21255791  T
Q  113 attaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatt 173  Q
    |||| |||||||||  | |||||||||||| || || |||||||| || ||||||| ||||    
T  21255790 attagtaacttcaggaatgaaaattcaaatgacttatatttgcagggatgaaagacttatt 21255730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 101 - 239
Target Start/End: Original strand, 53037140 - 53037279
Alignment:
Q  101 taattacatctgattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagccaaccacctcactcaatcatca 200  Q
    |||||||||||||||| ||||||||| ||||||||||||||| ||||| |||||||  || ||||||| ||||||||| |||||| || | |||| ||||    
T  53037140 taattacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcaaggatgaaagacctatttaagcaaaccacttcgcccaattatca 53037239  T
Q  201 cttgccacat-ggcaccacgtcgctaatgacaacccacct 239  Q
    |||||||||| |||||||||| ||||||| || |||||||    
T  53037240 cttgccacatgggcaccacgttgctaatggcagcccacct 53037279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 95 - 243
Target Start/End: Complemental strand, 1741664 - 1741515
Alignment:
Q  95 tggtcctaattacatctgattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagccaaccacctcactcaa 194  Q
    |||||||||||||||||||||| ||||| ||| |||||||||| || | ||||| |||| ||| || ||||||| ||||||||| || | || |   |||    
T  1741664 tggtcctaattacatctgattagtaactccagggacgaaaatttaattgacctatattttcagggatgaaagacctatttaagcaaatcgccacgtccaa 1741565  T
Q  195 tcatcacttgccacat-ggcaccacgtcgctaatgacaacccacctcagc 243  Q
    |||||||||||||||| ||||||||||||||||||||| |||||||||||    
T  1741564 tcatcacttgccacatgggcaccacgtcgctaatgacagcccacctcagc 1741515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 60 - 165
Target Start/End: Complemental strand, 38642972 - 38642867
Alignment:
Q  60 cattttgctattgtaaatattaatcatttaaaaaatggtcctaattacatctgattaataacttcagagacgaaaattcaaataacctaaatttgcagag 159  Q
    |||||||| |||| ||||||||||||||| |||||| ||||||||| |||||||||||||||||||  ||||||| |||||||| |||| |||||||| |    
T  38642972 cattttgccattgcaaatattaatcatttgaaaaatagtcctaattgcatctgattaataacttcatggacgaaagttcaaatagcctatatttgcaggg 38642873  T
Q  160 acgaaa 165  Q
    ||||||    
T  38642872 acgaaa 38642867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 101 - 231
Target Start/End: Original strand, 35432464 - 35432595
Alignment:
Q  101 taattacatctgattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagccaaccacctcactcaatcatca 200  Q
    |||||||||||||||| ||||||||  | |||||||||||||   ||| |||||||| |||||||||| |||||||||||||||| || | | |||||||    
T  35432464 taattacatctgattagtaacttcatgggcgaaaattcaaatggtctatatttgcagggacgaaagacctatttaagccaaccacttcgcccgatcatca 35432563  T
Q  201 cttgccacat-ggcaccacgtcgctaatgaca 231  Q
    |||||||| | ||||||||||| |||||||||    
T  35432564 cttgccacttgggcaccacgtcactaatgaca 35432595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 75 - 243
Target Start/End: Complemental strand, 30654777 - 30654612
Alignment:
Q  75 aatattaatcatttaaaaaatggtcctaattacatctgattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtattt 174  Q
    |||||||||||||| ||||||||| ||||||||||   |||| ||||||||  ||||||||| ||||| || || |||||||   ||||||||| |||||    
T  30654777 aatattaatcatttgaaaaatggttctaattacat---attagtaacttcatggacgaaaatgcaaatgacatatatttgcaagaacgaaagacctattt 30654681  T
Q  175 aagccaaccacctcactcaatcatcacttgccacatg-gcaccacgtcgctaatgacaacccacctcagc 243  Q
    |||  |||||| ||  | ||||||||||||||| ||| ||||||||| |||||||||||| |||||||||    
T  30654680 aagataaccacatc-gttaatcatcacttgccatatgagcaccacgttgctaatgacaactcacctcagc 30654612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 112 - 176
Target Start/End: Original strand, 21300450 - 21300514
Alignment:
Q  112 gattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaa 176  Q
    ||||| |||||||||||||||||||||||||||| || |||||||| |||||||||| |||||||    
T  21300450 gattagtaacttcagagacgaaaattcaaataacatatatttgcagggacgaaagacctatttaa 21300514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 111 - 179
Target Start/End: Complemental strand, 51279299 - 51279231
Alignment:
Q  111 tgattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagcc 179  Q
    |||||| ||||||| | ||||||||||||||||||||| |||||||| |||||||||| ||||||||||    
T  51279299 tgattagtaacttctgggacgaaaattcaaataacctatatttgcagggacgaaagacatatttaagcc 51279231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 112 - 179
Target Start/End: Complemental strand, 1741454 - 1741387
Alignment:
Q  112 gattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagcc 179  Q
    ||||| ||||||||| ||||||||||||||| ||||| |||||||| |||||||||| ||||||||||    
T  1741454 gattagtaacttcagggacgaaaattcaaatgacctatatttgcagggacgaaagacatatttaagcc 1741387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 112 - 178
Target Start/End: Original strand, 10998190 - 10998256
Alignment:
Q  112 gattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagc 178  Q
    ||||| ||||||||| ||||||||||||||| ||||| |||||||||||||||| || |||||||||    
T  10998190 gattagtaacttcagggacgaaaattcaaatgacctatatttgcagagacgaaaaacatatttaagc 10998256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 128 - 231
Target Start/End: Complemental strand, 38642873 - 38642770
Alignment:
Q  128 gacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagccaaccacctcactcaatcatcacttgccacat-ggcaccacgtcgctaa 226  Q
    ||||||||||||||||  ||| |||||||| || ||||  | ||||||| ||||||||||| | || |||||||||||||||| |||||||| |||||||    
T  38642873 gacgaaaattcaaatagtctatatttgcagggatgaaaccc-tatttaaaccaaccacctcgcccactcatcacttgccacatgggcaccacatcgctaa 38642775  T
Q  227 tgaca 231  Q
    |||||    
T  38642774 tgaca 38642770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 112 - 179
Target Start/End: Complemental strand, 10749385 - 10749318
Alignment:
Q  112 gattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagcc 179  Q
    ||||| ||||||||| ||||||||||||||| ||||| |||| ||| |||||||||| ||||||||||    
T  10749385 gattagtaacttcagggacgaaaattcaaatgacctatatttacagggacgaaagacctatttaagcc 10749318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 112 - 174
Target Start/End: Complemental strand, 40256941 - 40256879
Alignment:
Q  112 gattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtattt 174  Q
    ||||| ||||||||| ||||||||||||||||||||| |||||||  |||||||||| |||||    
T  40256941 gattagtaacttcagggacgaaaattcaaataacctatatttgcatggacgaaagacctattt 40256879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 118 - 179
Target Start/End: Original strand, 30654802 - 30654863
Alignment:
Q  118 taacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagcc 179  Q
    |||||||| |||||||||||||||| ||||| |||||||| |||||||||| |||| |||||    
T  30654802 taacttcatagacgaaaattcaaatgacctatatttgcagggacgaaagacctattaaagcc 30654863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 113 - 177
Target Start/End: Complemental strand, 30803912 - 30803848
Alignment:
Q  113 attaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaag 177  Q
    |||| ||||||||||||||||||||||||| ||||| | ||| || |||||||||| ||||||||    
T  30803912 attagtaacttcagagacgaaaattcaaatgacctatagttgaagggacgaaagacctatttaag 30803848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 112 - 180
Target Start/End: Complemental strand, 53037094 - 53037026
Alignment:
Q  112 gattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagcca 180  Q
    ||||| ||||||||| ||||||||||||||| ||||| |||| ||| || ||||||| |||||||||||    
T  53037094 gattagtaacttcagggacgaaaattcaaatgacctatatttacagggatgaaagacttatttaagcca 53037026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 53
Target Start/End: Complemental strand, 33458088 - 33458046
Alignment:
Q  11 tccctccaaatataggtcatttgaattttcgcctctaaagtta 53  Q
    ||||| ||||||||||||||||||||||||| |||||||||||    
T  33458088 tccctacaaatataggtcatttgaattttcgtctctaaagtta 33458046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 118 - 179
Target Start/End: Complemental strand, 11312796 - 11312735
Alignment:
Q  118 taacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagcc 179  Q
    ||||||||| ||||||||||||||| ||||| ||||  || |||||||||| ||||||||||    
T  11312796 taacttcagggacgaaaattcaaatgacctatatttagagggacgaaagacatatttaagcc 11312735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 112 - 176
Target Start/End: Original strand, 30890524 - 30890588
Alignment:
Q  112 gattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaa 176  Q
    ||||| ||||||||| || |||||||||||| ||||| |||| |||| ||||||||| |||||||    
T  30890524 gattagtaacttcagggatgaaaattcaaatgacctatatttacagaaacgaaagacctatttaa 30890588  T

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Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 112 - 176
Target Start/End: Complemental strand, 55036736 - 55036672
Alignment:
Q  112 gattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaa 176  Q
    ||||| |||||||||  | |||||||||||| ||||| |||||||| |||||||||| |||||||    
T  55036736 gattagtaacttcaggaatgaaaattcaaatgacctatatttgcagggacgaaagacctatttaa 55036672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 112 - 176
Target Start/End: Original strand, 55036986 - 55037050
Alignment:
Q  112 gattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaa 176  Q
    ||||| ||||||||   |||||||||||||| ||||| |||||||| |||||||||| |||||||    
T  55036986 gattagtaacttcaagaacgaaaattcaaatgacctatatttgcagggacgaaagacatatttaa 55037050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 112 - 179
Target Start/End: Complemental strand, 22129073 - 22129006
Alignment:
Q  112 gattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagcc 179  Q
    ||||| ||||||||| |||||||||||||||| |||| |||| | | || ||||||| ||||||||||    
T  22129073 gattagtaacttcagtgacgaaaattcaaatagcctatatttacggggatgaaagacctatttaagcc 22129006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 129 - 179
Target Start/End: Original strand, 38642990 - 38643040
Alignment:
Q  129 acgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagcc 179  Q
    |||||||||||||| | ||| |||||||||||||||| || ||||||||||    
T  38642990 acgaaaattcaaatgatctatatttgcagagacgaaacacctatttaagcc 38643040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 128 - 177
Target Start/End: Original strand, 53037360 - 53037409
Alignment:
Q  128 gacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaag 177  Q
    ||||||||||||||| ||||| |||| |||||||||||||  ||||||||    
T  53037360 gacgaaaattcaaatgacctatatttacagagacgaaagatatatttaag 53037409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 111 - 179
Target Start/End: Original strand, 40257189 - 40257257
Alignment:
Q  111 tgattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagcc 179  Q
    |||||| ||| ||||| |||||||||||||||||| || ||||  || ||||||| || ||||||||||    
T  40257189 tgattagtaatttcagggacgaaaattcaaataacttatatttatagggacgaaaaacatatttaagcc 40257257  T

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Target: scaffold0233 (Bit Score: 92; Significance: 1e-44; HSPs: 2)
Name: scaffold0233
Description:

Target: scaffold0233; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 18 - 241
Target Start/End: Original strand, 8459 - 8687
Alignment:
Q  18 aaatataggtcatttgaattttcgcctctaaagtta----tcctttcattttgctattgtaaatattaatcatttaaaaaatggtcctaattacatctga 113  Q
    |||||||||||||||||||||||| | || ||||||    ||||| || | ||| | || ||||||||||||||| ||||||||||||||||||||||||    
T  8459 aaatataggtcatttgaattttcgtccctgaagttactaatccttccaatctgccactgcaaatattaatcatttgaaaaatggtcctaattacatctga 8558  T
Q  114 ttaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagccaaccacctcactcaatcatcacttgccacat-gg 212  Q
    ||| |||| |||| |||  |||||||||| ||  | |||||||| |||||||||| ||||||||||||||| ||| | ||||||||||||||||||| ||    
T  8559 ttagtaacatcagggacagaaattcaaatgacagatatttgcagggacgaaagacctatttaagccaaccatctcgcccaatcatcacttgccacatggg 8658  T
Q  213 caccacgtcgctaatgacaacccacctca 241  Q
    | |||| || ||||||||| |||||||||    
T  8659 ctccacatcactaatgacagcccacctca 8687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0233; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 112 - 177
Target Start/End: Complemental strand, 8500 - 8435
Alignment:
Q  112 gattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaag 177  Q
    ||||| ||||||||| ||||||||||||||| ||||| ||||  ||||||||||||| ||||||||    
T  8500 gattagtaacttcagggacgaaaattcaaatgacctatatttaaagagacgaaagacctatttaag 8435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321 (Bit Score: 83; Significance: 2e-39; HSPs: 2)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 74 - 243
Target Start/End: Original strand, 10748 - 10918
Alignment:
Q  74 aaatattaatcatttaaaaaatggtcctaattacatctgattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatt 173  Q
    ||||||||||||||| |    ||||||||| |||||||||||| ||||||||| ||||||||||||||| ||||| |||||||| || ||||||| ||||    
T  10748 aaatattaatcatttgacttttggtcctaactacatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcagggatgaaagacctatt 10847  T
Q  174 taagccaaccacctcactcaatcatcacttgccacat-ggcaccacgtcgctaatgacaacccacctcagc 243  Q
    || || ||||||||  | ||||||||||||||||||| |||||||||||||||||||||  ||||||||||    
T  10848 tatgcaaaccaccttgcccaatcatcacttgccacatgggcaccacgtcgctaatgacagtccacctcagc 10918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 112 - 179
Target Start/End: Original strand, 10979 - 11046
Alignment:
Q  112 gattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagcc 179  Q
    ||||| ||||||||  ||||||||||||||| ||||| |||||||| |||||||||| ||||||||||    
T  10979 gattagtaacttcatggacgaaaattcaaatgacctatatttgcagggacgaaagacatatttaagcc 11046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0201 (Bit Score: 79; Significance: 6e-37; HSPs: 2)
Name: scaffold0201
Description:

Target: scaffold0201; HSP #1
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 74 - 243
Target Start/End: Complemental strand, 14191 - 14021
Alignment:
Q  74 aaatattaatcatttaaaaaatggtcctaattacatctgattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatt 173  Q
    ||||||||||||||| |    ||||||||||||||| |||||  ||||||||  ||||||||||||||| ||||| |||||||| || ||||||| ||||    
T  14191 aaatattaatcatttgacttttggtcctaattacatatgatttgtaacttcatggacgaaaattcaaatgacctatatttgcagggatgaaagacctatt 14092  T
Q  174 taagccaaccacctcactcaatcatcacttgccacat-ggcaccacgtcgctaatgacaacccacctcagc 243  Q
    ||| | ||||||||| | ||||||||||||||||||| |||||||| |||||||| |||||||||||||||    
T  14091 taatcaaaccacctcgcccaatcatcacttgccacatgggcaccacatcgctaataacaacccacctcagc 14021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0201; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 128 - 179
Target Start/End: Complemental strand, 13944 - 13893
Alignment:
Q  128 gacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagcc 179  Q
    ||||||||||||||| ||||| |||| |||||||||||||| ||||||||||    
T  13944 gacgaaaattcaaattacctatatttacagagacgaaagacatatttaagcc 13893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1493 (Bit Score: 75; Significance: 1e-34; HSPs: 2)
Name: scaffold1493
Description:

Target: scaffold1493; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 74 - 243
Target Start/End: Complemental strand, 891 - 721
Alignment:
Q  74 aaatattaatcatttaaaaaatggtcctaattacatctgattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatt 173  Q
    ||||||||||||||| |    |||||||||||| ||||||||| ||||||||| ||||||||||||||| ||||| |||||||| || ||||||| ||||    
T  891 aaatattaatcatttgacttttggtcctaattatatctgattagtaacttcagggacgaaaattcaaatgacctatatttgcagggatgaaagacctatt 792  T
Q  174 taagccaaccacctcactcaatcatcacttgccacat-ggcaccacgtcgctaatgacaacccacctcagc 243  Q
    ||||  ||||||||| | ||||||||||||||||| | || |||||||| ||||||||| ||||| |||||    
T  791 taagaaaaccacctcgcccaatcatcacttgccacttgggtaccacgtcactaatgacagcccacttcagc 721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1493; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 112 - 179
Target Start/End: Original strand, 910 - 977
Alignment:
Q  112 gattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagcc 179  Q
    ||||| ||||||||| |||||||||||||||  || | |||| ||| |||||||||| ||||||||||    
T  910 gattagtaacttcagggacgaaaattcaaatggccaatatttacagggacgaaagacatatttaagcc 977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 75; Significance: 1e-34; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 74 - 239
Target Start/End: Original strand, 120285 - 120451
Alignment:
Q  74 aaatattaatcatttaaaaaatggtcctaattacatctgattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatt 173  Q
    ||||||||||||||| || |||| |  |||||||||||||||| ||||||||  |||||||||||||||||| || |||||||| |||||||||  ||||    
T  120285 aaatattaatcatttgaataatgattttaattacatctgattagtaacttcatggacgaaaattcaaataacatatatttgcagggacgaaagatctatt 120384  T
Q  174 taagccaaccacctcactcaatcatcacttgccacatg-gcaccacgtcgctaatgacaacccacct 239  Q
    |||| |||| ||||| | ||||||||||||| |||||| ||||||| ||||||| |||| |||||||    
T  120385 taagtcaactacctcgcccaatcatcacttgtcacatgagcaccacatcgctaacgacagcccacct 120451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 112 - 179
Target Start/End: Original strand, 120517 - 120582
Alignment:
Q  112 gattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagcc 179  Q
    ||||||||||||  | |||||||||| |||| || || ||||||||||||||||||| ||||||||||    
T  120517 gattaataactt--gggacgaaaattgaaatgacatatatttgcagagacgaaagacatatttaagcc 120582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0202 (Bit Score: 73; Significance: 2e-33; HSPs: 2)
Name: scaffold0202
Description:

Target: scaffold0202; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 11 - 243
Target Start/End: Original strand, 14254 - 14491
Alignment:
Q  11 tccctccaaatataggtcatttgaattttcgcctctaaagtta----tcctttcattttgctattgtaaatattaatcatttaaaaaatggtcctaatta 106  Q
    ||||| |||||||| |||||||||||||||| |  | | ||||    ||||| || ||||| | || |||||||||| |||| |||||| ||||| ||||    
T  14254 tccctgcaaatataagtcatttgaattttcgtccttgaggttactaatccttccaatttgccactgcaaatattaataatttgaaaaatcgtcctgatta 14353  T
Q  107 catctgattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagccaaccacctcactcaatcatcacttgcc 206  Q
    |||||||||| ||||||||  || ||||||||||||    || |||||||  ||||||||||  ||||| |||||||||||| | |||||||||||||||    
T  14354 catctgattagtaacttcaaggatgaaaattcaaatggtatatatttgcaaggacgaaagaccaatttatgccaaccacctcgcccaatcatcacttgcc 14453  T
Q  207 acat-ggcaccacgtcgctaatgacaacccacctcagc 243  Q
    |||| |||||||| ||| |||||||||||||| |||||    
T  14454 acatgggcaccacatcgttaatgacaacccacgtcagc 14491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0202; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 128 - 182
Target Start/End: Complemental strand, 14286 - 14232
Alignment:
Q  128 gacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagccaac 182  Q
    ||||||||||||||| || || |||||||| |||||||||| ||||||| |||||    
T  14286 gacgaaaattcaaatgacttatatttgcagggacgaaagacctatttaaaccaac 14232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0206 (Bit Score: 56; Significance: 3e-23; HSPs: 2)
Name: scaffold0206
Description:

Target: scaffold0206; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 11 - 179
Target Start/End: Original strand, 10344 - 10516
Alignment:
Q  11 tccctccaaatataggtcatttgaattttcgcctctaaagtta----tcctttcattttgctattgtaaatattaatcatttaaaaaatggtcctaatta 106  Q
    ||||| ||||||||| ||||||||||||||| | || ||||||    ||||| || |||||   || ||||||||||||||| |    ||||||||||||    
T  10344 tccctgcaaatatagatcatttgaattttcgtccctgaagttactaatccttccaatttgcccctgcaaatattaatcatttgacttttggtcctaatta 10443  T
Q  107 catctgattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagcc 179  Q
    ||||| |||| ||||| ||| ||||||||||||||| ||||| |||||||||||||| || | ||||||||||    
T  10444 catcttattagtaactccagggacgaaaattcaaatgacctatatttgcagagacgatagtcatatttaagcc 10516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0206; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 112 - 179
Target Start/End: Complemental strand, 10392 - 10325
Alignment:
Q  112 gattaataacttcagagacgaaaattcaaataacctaaatttgcagagacgaaagacgtatttaagcc 179  Q
    ||||| ||||||||| ||||||||||||||| | ||| |||||||| |||||||||| ||||||||||    
T  10392 gattagtaacttcagggacgaaaattcaaatgatctatatttgcagggacgaaagacctatttaagcc 10325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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