View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20437_low_46 (Length: 272)
Name: NF20437_low_46
Description: NF20437
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20437_low_46 |
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Alignment Details
Target: chr3 (Bit Score: 207; Significance: 1e-113; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 13 - 256
Target Start/End: Original strand, 45225586 - 45225829
Alignment:
| Q |
13 |
aaaggattgggaaaagaatagcaatagtaaaatttatcatagatgcaatgaatgaaatggactgataaagttttattcccnnnnnnngtttatttaaaaa |
112 |
Q |
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| T |
45225586 |
aaaggattgggaaaagaatagcaatagtaaaatttatcatagatacaatgaatgaaatggactgataaagttctattccttttttttatttatttaaaaa |
45225685 |
T |
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| Q |
113 |
acatttggtaataactaatgctaaattctatttcatttttctccattttatatttcagcatcaatcaattaaagcataaaatagaagataatgccttgtg |
212 |
Q |
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| T |
45225686 |
acatttggtaataactaatgctaaattctatttcatttttctccattttatatttcagcatcaatcaattaaagcataaaatagaagataatgccttgtg |
45225785 |
T |
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| Q |
213 |
tttgttcatactccataggattgattctgttgtagccgagaatg |
256 |
Q |
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| T |
45225786 |
tttgttcatactccataggattgattctgttgtagccgagaatg |
45225829 |
T |
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