View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20438_high_4 (Length: 371)

Name: NF20438_high_4
Description: NF20438
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20438_high_4
NF20438_high_4
[»] chr1 (42 HSPs)
chr1 (21-365)||(29140235-29140596)
chr1 (19-96)||(34102525-34102601)
chr1 (19-93)||(5084956-5085030)
chr1 (19-93)||(15512648-15512722)
chr1 (19-93)||(28948831-28948905)
chr1 (19-93)||(49033835-49033909)
chr1 (19-90)||(3831209-3831280)
chr1 (19-93)||(3143566-3143640)
chr1 (19-93)||(28334087-28334161)
chr1 (19-93)||(48721736-48721810)
chr1 (28-93)||(12844010-12844075)
chr1 (19-96)||(16582697-16582774)
chr1 (20-93)||(32715956-32716028)
chr1 (19-92)||(51390406-51390479)
chr1 (22-93)||(5321889-5321960)
chr1 (21-92)||(34696751-34696822)
chr1 (19-93)||(9684583-9684657)
chr1 (22-92)||(25063377-25063447)
chr1 (19-73)||(28723537-28723591)
chr1 (19-93)||(36085132-36085206)
chr1 (19-73)||(44395700-44395754)
chr1 (28-96)||(30898427-30898495)
chr1 (29-92)||(8984377-8984440)
chr1 (19-73)||(25269538-25269592)
chr1 (19-89)||(34012648-34012718)
chr1 (19-93)||(52141042-52141116)
chr1 (28-93)||(9293855-9293919)
chr1 (28-93)||(44258003-44258067)
chr1 (28-96)||(51997127-51997195)
chr1 (42-89)||(4817777-4817824)
chr1 (42-89)||(4829577-4829624)
chr1 (101-140)||(29140989-29141028)
chr1 (19-78)||(47643702-47643761)
chr1 (59-93)||(8877972-8878006)
chr1 (19-93)||(15179573-15179646)
chr1 (43-73)||(44335473-44335503)
chr1 (43-88)||(33232026-33232071)
chr1 (28-93)||(46732828-46732893)
chr1 (19-96)||(47753901-47753978)
chr1 (19-60)||(50692539-50692580)
chr1 (19-59)||(4813362-4813402)
chr1 (40-88)||(12792906-12792954)
[»] chr4 (43 HSPs)
chr4 (19-93)||(46729468-46729542)
chr4 (19-90)||(37624995-37625066)
chr4 (19-89)||(5536647-5536717)
chr4 (19-93)||(12624859-12624933)
chr4 (19-89)||(24072930-24073000)
chr4 (22-82)||(52552391-52552451)
chr4 (19-94)||(43509245-43509320)
chr4 (19-93)||(5168142-5168216)
chr4 (19-93)||(22750710-22750784)
chr4 (19-73)||(31840258-31840312)
chr4 (19-93)||(50782935-50783008)
chr4 (22-103)||(54701152-54701233)
chr4 (22-93)||(20792157-20792228)
chr4 (22-93)||(52198597-52198667)
chr4 (35-93)||(45627956-45628014)
chr4 (28-70)||(56077196-56077238)
chr4 (16-73)||(5933046-5933103)
chr4 (28-93)||(21171895-21171960)
chr4 (21-73)||(3113529-3113581)
chr4 (21-93)||(5448824-5448895)
chr4 (19-90)||(25477388-25477459)
chr4 (19-85)||(33246374-33246440)
chr4 (22-93)||(43800974-43801045)
chr4 (22-73)||(51787936-51787987)
chr4 (19-93)||(31936962-31937036)
chr4 (19-93)||(40411211-40411285)
chr4 (23-89)||(54438677-54438743)
chr4 (19-88)||(3684061-3684130)
chr4 (28-93)||(11792607-11792671)
chr4 (28-93)||(11861274-11861338)
chr4 (19-88)||(22651627-22651696)
chr4 (28-93)||(23611343-23611407)
chr4 (28-93)||(50438182-50438247)
chr4 (22-90)||(26203297-26203365)
chr4 (28-88)||(39813831-39813891)
chr4 (48-88)||(51918528-51918568)
chr4 (19-82)||(10602089-10602152)
chr4 (21-59)||(7002347-7002385)
chr4 (19-73)||(30153112-30153166)
chr4 (19-93)||(31917538-31917612)
chr4 (21-66)||(32236998-32237043)
chr4 (19-96)||(54359845-54359922)
chr4 (43-87)||(39196907-39196951)
[»] chr3 (38 HSPs)
chr3 (19-89)||(3475612-3475682)
chr3 (19-93)||(20945170-20945244)
chr3 (19-93)||(35145394-35145467)
chr3 (19-93)||(46048685-46048759)
chr3 (19-92)||(31819568-31819641)
chr3 (21-93)||(11345484-11345556)
chr3 (28-93)||(29676611-29676676)
chr3 (19-82)||(11140858-11140921)
chr3 (19-106)||(12077598-12077685)
chr3 (19-73)||(26999205-26999259)
chr3 (19-93)||(28477546-28477620)
chr3 (19-73)||(29645486-29645540)
chr3 (19-93)||(42891580-42891654)
chr3 (19-93)||(43186971-43187045)
chr3 (21-94)||(31474587-31474660)
chr3 (19-72)||(40645834-40645887)
chr3 (42-93)||(26517085-26517136)
chr3 (19-94)||(41727107-41727182)
chr3 (22-93)||(44083792-44083863)
chr3 (19-82)||(50092831-50092894)
chr3 (19-93)||(14645759-14645833)
chr3 (19-93)||(31530998-31531071)
chr3 (22-88)||(34055740-34055806)
chr3 (19-73)||(39617142-39617196)
chr3 (28-93)||(11676066-11676130)
chr3 (28-93)||(30464892-30464956)
chr3 (28-93)||(33635116-33635180)
chr3 (28-93)||(37599692-37599756)
chr3 (53-93)||(30476221-30476261)
chr3 (19-73)||(22659742-22659796)
chr3 (43-93)||(27637967-27638017)
chr3 (28-93)||(10259020-10259084)
chr3 (28-93)||(11335468-11335532)
chr3 (28-93)||(23241668-23241732)
chr3 (28-93)||(26725776-26725840)
chr3 (28-73)||(33987063-33987107)
chr3 (19-88)||(50524851-50524920)
chr3 (28-93)||(55257908-55257972)
[»] chr2 (36 HSPs)
chr2 (19-96)||(37355200-37355277)
chr2 (19-93)||(17663787-17663861)
chr2 (19-93)||(20362145-20362219)
chr2 (19-92)||(44421896-44421969)
chr2 (19-93)||(3237878-3237952)
chr2 (19-93)||(28733986-28734060)
chr2 (19-89)||(534628-534698)
chr2 (19-93)||(41865878-41865952)
chr2 (19-92)||(27297740-27297813)
chr2 (19-96)||(31644308-31644385)
chr2 (19-71)||(38981961-38982013)
chr2 (22-93)||(24775031-24775102)
chr2 (19-93)||(7278481-7278555)
chr2 (19-93)||(27749630-27749704)
chr2 (19-93)||(41327672-41327746)
chr2 (19-88)||(44424756-44424825)
chr2 (21-69)||(11459319-11459367)
chr2 (19-89)||(2048702-2048772)
chr2 (19-93)||(15851695-15851768)
chr2 (28-78)||(37314763-37314812)
chr2 (16-93)||(247820-247897)
chr2 (21-93)||(43119234-43119306)
chr2 (29-93)||(45150610-45150674)
chr2 (22-93)||(3645485-3645556)
chr2 (22-93)||(8064941-8065012)
chr2 (19-70)||(28264844-28264895)
chr2 (28-91)||(31900638-31900700)
chr2 (42-93)||(41665894-41665945)
chr2 (19-89)||(4758189-4758259)
chr2 (19-73)||(11071832-11071886)
chr2 (19-73)||(12417557-12417611)
chr2 (19-73)||(12429617-12429671)
chr2 (19-89)||(23464845-23464914)
chr2 (19-96)||(17250826-17250902)
chr2 (28-93)||(17513253-17513317)
chr2 (28-73)||(24128986-24129030)
[»] scaffold0009 (1 HSPs)
scaffold0009 (22-96)||(25865-25939)
[»] chr7 (33 HSPs)
chr7 (19-93)||(26633009-26633083)
chr7 (19-93)||(18121912-18121985)
chr7 (19-88)||(35128548-35128617)
chr7 (23-93)||(2276447-2276517)
chr7 (19-93)||(10685247-10685321)
chr7 (19-93)||(21388405-21388479)
chr7 (19-93)||(48767728-48767802)
chr7 (19-88)||(34118173-34118242)
chr7 (21-93)||(5333767-5333839)
chr7 (21-96)||(1324872-1324947)
chr7 (19-93)||(4089369-4089443)
chr7 (19-93)||(19235933-19236007)
chr7 (195-256)||(10396106-10396167)
chr7 (19-96)||(29635906-29635983)
chr7 (22-93)||(43601036-43601107)
chr7 (19-93)||(49100837-49100912)
chr7 (21-94)||(6375999-6376072)
chr7 (48-93)||(20124364-20124409)
chr7 (19-92)||(36726041-36726114)
chr7 (19-82)||(8318694-8318757)
chr7 (42-93)||(21759906-21759957)
chr7 (42-89)||(25750552-25750599)
chr7 (21-72)||(37673902-37673953)
chr7 (42-93)||(42983482-42983533)
chr7 (36-78)||(20123625-20123667)
chr7 (28-93)||(14801798-14801862)
chr7 (28-93)||(15248790-15248854)
chr7 (28-93)||(29983468-29983532)
chr7 (28-73)||(36858366-36858410)
chr7 (19-91)||(21800927-21800998)
chr7 (20-68)||(36116481-36116529)
chr7 (23-59)||(37136349-37136385)
chr7 (22-70)||(40263878-40263926)
[»] chr6 (19 HSPs)
chr6 (19-93)||(19839094-19839168)
chr6 (19-93)||(1763976-1764050)
chr6 (19-97)||(6791539-6791617)
chr6 (22-90)||(30249027-30249095)
chr6 (19-93)||(31945781-31945855)
chr6 (20-93)||(11303021-11303094)
chr6 (19-82)||(15981957-15982020)
chr6 (20-73)||(197338-197391)
chr6 (19-52)||(6419212-6419245)
chr6 (195-256)||(8353727-8353788)
chr6 (28-93)||(24068003-24068067)
chr6 (19-78)||(16186733-16186792)
chr6 (19-66)||(16327287-16327334)
chr6 (19-66)||(16350685-16350732)
chr6 (19-85)||(31536176-31536242)
chr6 (19-88)||(3729584-3729653)
chr6 (28-93)||(30269816-30269880)
chr6 (19-92)||(30465838-30465911)
chr6 (20-60)||(12802802-12802842)
[»] chr5 (31 HSPs)
chr5 (19-93)||(39690353-39690427)
chr5 (19-93)||(25690520-25690594)
chr5 (19-93)||(27642665-27642739)
chr5 (19-92)||(3558895-3558968)
chr5 (19-93)||(36750643-36750717)
chr5 (19-73)||(9946244-9946298)
chr5 (19-89)||(21912283-21912353)
chr5 (21-93)||(12895047-12895118)
chr5 (19-93)||(15898329-15898403)
chr5 (19-93)||(27925436-27925510)
chr5 (19-93)||(35568872-35568946)
chr5 (19-73)||(36347488-36347542)
chr5 (28-93)||(8760910-8760974)
chr5 (19-90)||(3247141-3247213)
chr5 (19-90)||(10523143-10523212)
chr5 (21-93)||(31641057-31641129)
chr5 (19-93)||(4738792-4738866)
chr5 (22-93)||(7510705-7510776)
chr5 (19-82)||(18729756-18729818)
chr5 (19-73)||(129768-129822)
chr5 (19-73)||(5151088-5151142)
chr5 (28-90)||(18032767-18032829)
chr5 (19-73)||(34877829-34877883)
chr5 (43-93)||(36177480-36177530)
chr5 (34-88)||(43060087-43060141)
chr5 (28-73)||(6514307-6514351)
chr5 (28-93)||(35758258-35758322)
chr5 (28-93)||(36745673-36745737)
chr5 (28-93)||(38040856-38040920)
chr5 (28-93)||(40144137-40144201)
chr5 (25-93)||(25017538-25017606)
[»] chr8 (45 HSPs)
chr8 (19-96)||(57054-57131)
chr8 (21-94)||(7772676-7772749)
chr8 (19-89)||(38773221-38773291)
chr8 (19-93)||(43980452-43980526)
chr8 (21-93)||(26878597-26878669)
chr8 (19-93)||(1177024-1177098)
chr8 (19-93)||(10396099-10396173)
chr8 (19-93)||(25198452-25198525)
chr8 (19-93)||(31252524-31252598)
chr8 (19-93)||(37956277-37956351)
chr8 (19-92)||(38202862-38202935)
chr8 (22-93)||(31746275-31746346)
chr8 (19-93)||(24962234-24962308)
chr8 (19-93)||(43191350-43191424)
chr8 (28-93)||(16357159-16357224)
chr8 (19-91)||(37141889-37141961)
chr8 (21-88)||(885625-885692)
chr8 (19-82)||(5191429-5191492)
chr8 (19-94)||(38761224-38761299)
chr8 (22-93)||(40517906-40517977)
chr8 (19-73)||(1769338-1769392)
chr8 (19-93)||(24512035-24512109)
chr8 (19-93)||(39543529-39543603)
chr8 (19-73)||(40601929-40601983)
chr8 (19-93)||(45183731-45183805)
chr8 (21-86)||(3006000-3006065)
chr8 (28-93)||(5969809-5969873)
chr8 (28-89)||(23280820-23280881)
chr8 (28-93)||(31008341-31008405)
chr8 (28-93)||(41726164-41726228)
chr8 (48-96)||(40790980-40791028)
chr8 (22-93)||(2303258-2303329)
chr8 (22-93)||(2327852-2327923)
chr8 (43-90)||(34158103-34158150)
chr8 (19-73)||(12763005-12763058)
chr8 (22-60)||(22590541-22590579)
chr8 (19-93)||(40807880-40807954)
chr8 (28-93)||(19726519-19726583)
chr8 (40-89)||(23399652-23399701)
chr8 (19-96)||(25185196-25185273)
chr8 (28-73)||(27679100-27679144)
chr8 (19-60)||(36309497-36309538)
chr8 (28-93)||(38770056-38770121)
chr8 (56-92)||(14522226-14522262)
chr8 (45-73)||(17933892-17933920)
[»] scaffold1091 (1 HSPs)
scaffold1091 (19-92)||(1782-1855)
[»] scaffold0176 (1 HSPs)
scaffold0176 (30-93)||(20180-20243)
[»] scaffold0121 (1 HSPs)
scaffold0121 (19-93)||(24222-24296)
[»] scaffold0070 (1 HSPs)
scaffold0070 (28-93)||(12954-13018)
[»] scaffold0036 (1 HSPs)
scaffold0036 (35-90)||(54979-55034)


Alignment Details
Target: chr1 (Bit Score: 240; Significance: 1e-133; HSPs: 42)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 240; E-Value: 1e-133
Query Start/End: Original strand, 21 - 365
Target Start/End: Complemental strand, 29140596 - 29140235
Alignment:
Q  21 catctaataatttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtgcttacatatagggacagaaagaatagtaaggttttacacacc 120  Q
    ||||||||||||||||||| |||||| ||||| |||||||| |||||| |||| |||| || |||||||| |||||||||||||||||| ||||||||||    
T  29140596 catctaataatttaaaaaggggtttacatttaaggacaaaagtaaaattaaatgggtgtttgcatataggaacagaaagaatagtaaggatttacacacc 29140497  T
Q  121 taaatatttgttatggcttgtctttat--ttgccgatactcattt-cgtgccgtatgcatattttcaagagaaac--------------aaaacactatc 203  Q
    |||||||||||||||||||||||||||  |||||||||||||||| ||||||||||||| |||||||||||||||              |||||||||||    
T  29140496 taaatatttgttatggcttgtctttatatttgccgatactcattttcgtgccgtatgcaaattttcaagagaaactgatcaagagaaacaaaacactatc 29140397  T
Q  204 ttcaattccacttgctcttgtgtgtgtaaaagttttctacatagaaagcttagtatgtgagtaatgaaaaataaaggaaaattttatgcaatttgtttct 303  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  29140396 ttcaattccacttgctcttgtgtgtgtaaaagttttctacatagaaagcttagtctgtgagtaatgaaaaataaaggaaaattttatgcaatttgtttct 29140297  T
Q  304 ttcaaccaaagtttcattttttaggctttgtttatttattcaggataaatgagaataatcta 365  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  29140296 ttcagccaaagtttcattttttaggctttgtttatttattcaggataaatgagaatgatcta 29140235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 19 - 96
Target Start/End: Original strand, 34102525 - 34102601
Alignment:
Q  19 tgcatctaataatttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtgcttacatatagggacaga 96  Q
    ||||||||||||||| ||||| |||| ||||||||||||||||||||||||||||||||||||| ||| |||||||||    
T  34102525 tgcatctaataatttgaaaagtggtt-atatttagggacaaaaataaaatcaaattggtgcttaaatacagggacaga 34102601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 19 - 93
Target Start/End: Complemental strand, 5085030 - 5084956
Alignment:
Q  19 tgcatctaataatttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtgcttacatatagggac 93  Q
    |||||||| |||||| ||||| |||||| |||||||||||||||||||||||||| |||||||| ||||||||||    
T  5085030 tgcatctagtaatttgaaaaggggtttacatttagggacaaaaataaaatcaaatgggtgcttagatatagggac 5084956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 19 - 93
Target Start/End: Complemental strand, 15512722 - 15512648
Alignment:
Q  19 tgcatctaataatttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtgcttacatatagggac 93  Q
    |||||||| |||||| |||||  ||||| |||||||||||||||||||||||||| |||||||||||||||||||    
T  15512722 tgcatctagtaatttgaaaaggagtttacatttagggacaaaaataaaatcaaatgggtgcttacatatagggac 15512648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 19 - 93
Target Start/End: Complemental strand, 28948905 - 28948831
Alignment:
Q  19 tgcatctaataatttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtgcttacatatagggac 93  Q
    |||||||| |||||| |||||  ||||| |||||||||||||||||||||||||| |||||||||||||||||||    
T  28948905 tgcatctagtaatttgaaaaggagtttacatttagggacaaaaataaaatcaaatgggtgcttacatatagggac 28948831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 19 - 93
Target Start/End: Original strand, 49033835 - 49033909
Alignment:
Q  19 tgcatctaataatttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtgcttacatatagggac 93  Q
    |||||||| |||||||||||| ||||||| ||||||||||||| |||||||||||||||| ||||||| ||||||    
T  49033835 tgcatctagtaatttaaaaaggggtttatgtttagggacaaaagtaaaatcaaattggtggttacatacagggac 49033909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 19 - 90
Target Start/End: Original strand, 3831209 - 3831280
Alignment:
Q  19 tgcatctaataatttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtgcttacatatagg 90  Q
    |||||||| |||||| ||||| |||||| ||||||||||||||||||||||||||||| ||||| |||||||    
T  3831209 tgcatctagtaatttgaaaaggggtttacatttagggacaaaaataaaatcaaattggcgcttagatatagg 3831280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 19 - 93
Target Start/End: Original strand, 3143566 - 3143640
Alignment:
Q  19 tgcatctaataatttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtgcttacatatagggac 93  Q
    ||||||| ||||||| ||||| ||| || |||||||||||||||||||||||||| |||||||| ||||||||||    
T  3143566 tgcatctgataatttgaaaaggggtgtacatttagggacaaaaataaaatcaaatgggtgcttaaatatagggac 3143640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 19 - 93
Target Start/End: Complemental strand, 28334161 - 28334087
Alignment:
Q  19 tgcatctaataatttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtgcttacatatagggac 93  Q
    |||||||| |||||| ||||| |||||| |||||||||||||| ||||||||||| |||| ||||||||||||||    
T  28334161 tgcatctagtaatttgaaaaggggtttacatttagggacaaaagtaaaatcaaatgggtgtttacatatagggac 28334087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 19 - 93
Target Start/End: Complemental strand, 48721810 - 48721736
Alignment:
Q  19 tgcatctaataatttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtgcttacatatagggac 93  Q
    |||||||| |||||| |||||||| ||| |||||||||||||||||||||||||| |||| ||| ||||||||||    
T  48721810 tgcatctagtaatttgaaaagagggttacatttagggacaaaaataaaatcaaataggtgtttagatatagggac 48721736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 28 - 93
Target Start/End: Complemental strand, 12844075 - 12844010
Alignment:
Q  28 taatttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtgcttacatatagggac 93  Q
    |||||||||||| |||||| |||||||||||||||||||| ||||  |||| ||||||||||||||    
T  12844075 taatttaaaaaggggtttacatttagggacaaaaataaaaacaaaagggtggttacatatagggac 12844010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 19 - 96
Target Start/End: Original strand, 16582697 - 16582774
Alignment:
Q  19 tgcatctaataatttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtgcttacatatagggacaga 96  Q
    |||||||| |||||| ||||||  |||||||||||| |||||| ||||||||||| |||| |||||||||||| ||||    
T  16582697 tgcatctagtaatttgaaaagaaatttatatttaggaacaaaagtaaaatcaaatgggtgtttacatatagggtcaga 16582774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 20 - 93
Target Start/End: Original strand, 32715956 - 32716028
Alignment:
Q  20 gcatctaataatttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtgcttacatatagggac 93  Q
    ||||||| |||||| ||||| |||||| |||||| ||||||||||||||||||| |||||||| ||||||||||    
T  32715956 gcatctagtaatttgaaaag-ggtttacatttagagacaaaaataaaatcaaatgggtgcttagatatagggac 32716028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 19 - 92
Target Start/End: Complemental strand, 51390479 - 51390406
Alignment:
Q  19 tgcatctaataatttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtgcttacatataggga 92  Q
    |||||||| |||||||||||| |||||| |||||||||||||| |||| |||||| |||| ||| |||||||||    
T  51390479 tgcatctagtaatttaaaaaggggtttacatttagggacaaaattaaagtcaaatgggtgtttagatataggga 51390406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 22 - 93
Target Start/End: Complemental strand, 5321960 - 5321889
Alignment:
Q  22 atctaataatttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtgcttacatatagggac 93  Q
    ||||| |||||| ||||| |||||| |||||||||||||||||||||||||| |||| ||| | ||||||||    
T  5321960 atctagtaatttgaaaaggggtttacatttagggacaaaaataaaatcaaatgggtgtttagacatagggac 5321889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 21 - 92
Target Start/End: Complemental strand, 34696822 - 34696751
Alignment:
Q  21 catctaataatttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtgcttacatataggga 92  Q
    |||||| |||||| ||||| |||||| ||||||| |||||||||||||||||| | |||||| |||||||||    
T  34696822 catctagtaatttgaaaaggggtttacatttaggaacaaaaataaaatcaaatggatgcttagatataggga 34696751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 19 - 93
Target Start/End: Complemental strand, 9684657 - 9684583
Alignment:
Q  19 tgcatctaataatttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtgcttacatatagggac 93  Q
    ||||||||||||||||||||| |||||| |||||   |||||||||||||||||| | |||||| ||||| ||||    
T  9684657 tgcatctaataatttaaaaaggggtttacatttaataacaaaaataaaatcaaatggatgcttagatataaggac 9684583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 22 - 92
Target Start/End: Original strand, 25063377 - 25063447
Alignment:
Q  22 atctaataatttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtgcttacatataggga 92  Q
    ||||| |||||| |||||  ||||| ||||| |||||||||||||||||||| |||| |||||||||||||    
T  25063377 atctagtaatttgaaaaggagtttacatttaaggacaaaaataaaatcaaatgggtggttacatataggga 25063447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 28723591 - 28723537
Alignment:
Q  19 tgcatctaataatttaaaaagaggtttatatttagggacaaaaataaaatcaaat 73  Q
    |||||||| |||||| |||||| ||||||||||| ||||||||||||||||||||    
T  28723591 tgcatctagtaatttgaaaagatgtttatatttaaggacaaaaataaaatcaaat 28723537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 19 - 93
Target Start/End: Original strand, 36085132 - 36085206
Alignment:
Q  19 tgcatctaataatttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtgcttacatatagggac 93  Q
    |||||||| |||||| |||| || |||| ||||||||||||||||||||| ||||  ||||||| ||||||||||    
T  36085132 tgcatctagtaatttgaaaaaagatttacatttagggacaaaaataaaattaaatgagtgcttagatatagggac 36085206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 44395700 - 44395754
Alignment:
Q  19 tgcatctaataatttaaaaagaggtttatatttagggacaaaaataaaatcaaat 73  Q
    ||||| ||||||||||||||||| |||||||||| ||| ||||||||||||||||    
T  44395700 tgcatttaataatttaaaaagagatttatatttaaggataaaaataaaatcaaat 44395754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 28 - 96
Target Start/End: Complemental strand, 30898495 - 30898427
Alignment:
Q  28 taatttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtgcttacatatagggacaga 96  Q
    |||||| ||||  |||||| ||||||| |||||||||||||||||| ||| |||| |||||||||||||    
T  30898495 taatttgaaaaagggtttacatttaggaacaaaaataaaatcaaataggtacttagatatagggacaga 30898427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 29 - 92
Target Start/End: Complemental strand, 8984440 - 8984377
Alignment:
Q  29 aatttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtgcttacatataggga 92  Q
    ||||| ||||||| |||| |||| |||||||||||||| |||||| |||||||| |||||||||    
T  8984440 aatttgaaaagagttttaaatttcgggacaaaaataaagtcaaatgggtgcttagatataggga 8984377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 25269538 - 25269592
Alignment:
Q  19 tgcatctaataatttaaaaagaggtttatatttagggacaaaaataaaatcaaat 73  Q
    |||||||| |||||| ||||| |||||||||||||| |||||| |||||||||||    
T  25269538 tgcatctagtaatttgaaaaggggtttatatttaggaacaaaagtaaaatcaaat 25269592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 89
Target Start/End: Original strand, 34012648 - 34012718
Alignment:
Q  19 tgcatctaataatttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtgcttacatatag 89  Q
    |||||||| ||||||||||| | ||||| |||||  |||||||||||||||||||  ||||||| ||||||    
T  34012648 tgcatctagtaatttaaaaaaaagtttacatttaacgacaaaaataaaatcaaatatgtgcttagatatag 34012718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 93
Target Start/End: Complemental strand, 52141116 - 52141042
Alignment:
Q  19 tgcatctaataatttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtgcttacatatagggac 93  Q
    |||||||| | |||| |||||  ||||| |||||||||||||||||||||||||| | |||||| ||||| ||||    
T  52141116 tgcatctagtgatttgaaaaggagtttacatttagggacaaaaataaaatcaaatggatgcttaaatatatggac 52141042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 28 - 93
Target Start/End: Original strand, 9293855 - 9293919
Alignment:
Q  28 taatttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtgcttacatatagggac 93  Q
    ||||||||||| ||||||| ||||| |||||||||||||||||||| |||| ||| ||||| ||||    
T  9293855 taatttaaaaa-aggtttacatttaaggacaaaaataaaatcaaatgggtgtttaaatatatggac 9293919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 28 - 93
Target Start/End: Original strand, 44258003 - 44258067
Alignment:
Q  28 taatttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtgcttacatatagggac 93  Q
    ||||||||||| ||||||| ||||| |||||||||||||||||||| |||| ||| ||||| ||||    
T  44258003 taatttaaaaa-aggtttacatttaaggacaaaaataaaatcaaatgggtgtttaaatatatggac 44258067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 28 - 96
Target Start/End: Original strand, 51997127 - 51997195
Alignment:
Q  28 taatttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtgcttacatatagggacaga 96  Q
    |||||| ||||| || ||| |||||||||||||||||||||||||| ||||  |||||  |||||||||    
T  51997127 taatttgaaaaggggattacatttagggacaaaaataaaatcaaatgggtggctacattaagggacaga 51997195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 42 - 89
Target Start/End: Complemental strand, 4817824 - 4817777
Alignment:
Q  42 gtttatatttagggacaaaaataaaatcaaattggtgcttacatatag 89  Q
    ||||| ||||| |||||||||||||||||||| |||||||| ||||||    
T  4817824 gtttacatttaaggacaaaaataaaatcaaatgggtgcttagatatag 4817777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 42 - 89
Target Start/End: Complemental strand, 4829624 - 4829577
Alignment:
Q  42 gtttatatttagggacaaaaataaaatcaaattggtgcttacatatag 89  Q
    ||||| ||||| |||||||||||||||||||| |||||||| ||||||    
T  4829624 gtttacatttaaggacaaaaataaaatcaaatgggtgcttagatatag 4829577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 101 - 140
Target Start/End: Original strand, 29140989 - 29141028
Alignment:
Q  101 atagtaaggttttacacacctaaatatttgttatggcttg 140  Q
    |||||||||||| |||||||||||| ||||||||||||||    
T  29140989 atagtaaggtttcacacacctaaatgtttgttatggcttg 29141028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 19 - 78
Target Start/End: Original strand, 47643702 - 47643761
Alignment:
Q  19 tgcatctaataatttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtg 78  Q
    |||||||| ||||||  |||| |||||| ||||| |||||||||||||||||||| ||||    
T  47643702 tgcatctagtaatttggaaaggggtttacatttatggacaaaaataaaatcaaatgggtg 47643761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 59 - 93
Target Start/End: Original strand, 8877972 - 8878006
Alignment:
Q  59 aaaataaaatcaaattggtgcttacatatagggac 93  Q
    |||||||||||||||||||||||| ||||||||||    
T  8877972 aaaataaaatcaaattggtgcttagatatagggac 8878006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 93
Target Start/End: Original strand, 15179573 - 15179646
Alignment:
Q  19 tgcatctaataatttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtgcttacatatagggac 93  Q
    ||||||||||||||||||||| | |||| ||||| | ||||||||||||| |||| | || |||| |||||||||    
T  15179573 tgcatctaataatttaaaaag-gttttacatttatgaacaaaaataaaataaaatggatggttacgtatagggac 15179646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 73
Target Start/End: Original strand, 44335473 - 44335503
Alignment:
Q  43 tttatatttagggacaaaaataaaatcaaat 73  Q
    |||||||||||||||||||||||||||||||    
T  44335473 tttatatttagggacaaaaataaaatcaaat 44335503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 88
Target Start/End: Original strand, 33232026 - 33232071
Alignment:
Q  43 tttatatttagggacaaaaataaaatcaaattggtgcttacatata 88  Q
    ||||||||||||||||||| ||||||||||| |||  |||||||||    
T  33232026 tttatatttagggacaaaagtaaaatcaaatgggtatttacatata 33232071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 93
Target Start/End: Complemental strand, 46732893 - 46732828
Alignment:
Q  28 taatttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtgcttacatatagggac 93  Q
    |||||||||||  | |||| ||||||||||||||||||| |||||| | || ||| ||||||||||    
T  46732893 taatttaaaaaaggatttacatttagggacaaaaataaagtcaaatagatgtttagatatagggac 46732828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 96
Target Start/End: Complemental strand, 47753978 - 47753901
Alignment:
Q  19 tgcatctaataatttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtgcttacatatagggacaga 96  Q
    |||||||| ||| || ||||  ||||||  |||||||||||||||||| ||||||  ||| ||| |||||||||||||    
T  47753978 tgcatctagtaagttgaaaatgggtttacgtttagggacaaaaataaagtcaaatgagtgtttagatatagggacaga 47753901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 60
Target Start/End: Original strand, 50692539 - 50692580
Alignment:
Q  19 tgcatctaataatttaaaaagaggtttatatttagggacaaa 60  Q
    |||||||| |||||||||||| ||||| ||||||||||||||    
T  50692539 tgcatctagtaatttaaaaaggggtttgtatttagggacaaa 50692580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 59
Target Start/End: Complemental strand, 4813402 - 4813362
Alignment:
Q  19 tgcatctaataatttaaaaagaggtttatatttagggacaa 59  Q
    |||||||| |||||| ||||| |||||||||||||||||||    
T  4813402 tgcatctagtaatttgaaaaggggtttatatttagggacaa 4813362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 40 - 88
Target Start/End: Original strand, 12792906 - 12792954
Alignment:
Q  40 aggtttatatttagggacaaaaataaaatcaaattggtgcttacatata 88  Q
    ||||||| ||||| |||||||||||||||||||| |||| ||| |||||    
T  12792906 aggtttacatttaaggacaaaaataaaatcaaatgggtgtttaaatata 12792954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 55; Significance: 2e-22; HSPs: 43)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 19 - 93
Target Start/End: Original strand, 46729468 - 46729542
Alignment:
Q  19 tgcatctaataatttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtgcttacatatagggac 93  Q
    ||||||||||||||||||||||| |||| |||||||||||||||||||||||||| |||| ||| ||||||||||    
T  46729468 tgcatctaataatttaaaaagagatttacatttagggacaaaaataaaatcaaatgggtgtttagatatagggac 46729542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 19 - 90
Target Start/End: Complemental strand, 37625066 - 37624995
Alignment:
Q  19 tgcatctaataatttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtgcttacatatagg 90  Q
    ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||  ||||||| |||||||    
T  37625066 tgcatctaataatttgaaaagaggtttacatttagggacaaaaataaaatcaaatgagtgcttaaatatagg 37624995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 19 - 89
Target Start/End: Original strand, 5536647 - 5536717
Alignment:
Q  19 tgcatctaataatttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtgcttacatatag 89  Q
    |||||||| |||||| |||||||||||| |||||||||||||||||||||||||| ||| |||| ||||||    
T  5536647 tgcatctagtaatttgaaaagaggtttacatttagggacaaaaataaaatcaaatgggtacttagatatag 5536717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 19 - 93
Target Start/End: Original strand, 12624859 - 12624933
Alignment:
Q  19 tgcatctaataatttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtgcttacatatagggac 93  Q
    |||||||| |||||| |||||  ||||| ||||| |||||||||||||||||||| |||||||||||||||||||    
T  12624859 tgcatctagtaatttgaaaaggagtttacatttaaggacaaaaataaaatcaaatgggtgcttacatatagggac 12624933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 19 - 89
Target Start/End: Original strand, 24072930 - 24073000
Alignment:
Q  19 tgcatctaataatttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtgcttacatatag 89  Q
    |||||||| |||||| ||||| |||||||||||| |||||||||||||||||||| |||||||| ||||||    
T  24072930 tgcatctagtaatttgaaaaggggtttatatttatggacaaaaataaaatcaaatgggtgcttagatatag 24073000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 22 - 82
Target Start/End: Complemental strand, 52552451 - 52552391
Alignment:
Q  22 atctaataatttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtgctta 82  Q
    |||||||||||||||||| | |||||||||||||||||||||||| |||||| ||||||||    
T  52552451 atctaataatttaaaaagggatttatatttagggacaaaaataaagtcaaatgggtgctta 52552391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 19 - 94
Target Start/End: Original strand, 43509245 - 43509320
Alignment:
Q  19 tgcatctaataatttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtgcttacatatagggaca 94  Q
    ||||||||||||||| |||||  ||||| ||||||||||||||||||| |||||| | ||||||||| ||||||||    
T  43509245 tgcatctaataatttgaaaaggagtttacatttagggacaaaaataaagtcaaatggatgcttacatttagggaca 43509320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 19 - 93
Target Start/End: Original strand, 5168142 - 5168216
Alignment:
Q  19 tgcatctaataatttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtgcttacatatagggac 93  Q
    |||||||| |||| | ||||  |||||| |||||| |||||||||||||||||||||||||||| ||||||||||    
T  5168142 tgcatctagtaatatgaaaacgggtttacatttagagacaaaaataaaatcaaattggtgcttagatatagggac 5168216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 19 - 93
Target Start/End: Complemental strand, 22750784 - 22750710
Alignment:
Q  19 tgcatctaataatttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtgcttacatatagggac 93  Q
    |||||||| |||||| ||||  | |||| ||||||| ||||||||||||||||||||||| ||||||||||||||    
T  22750784 tgcatctactaatttgaaaaaggatttagatttaggaacaaaaataaaatcaaattggtggttacatatagggac 22750710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 31840258 - 31840312
Alignment:
Q  19 tgcatctaataatttaaaaagaggtttatatttagggacaaaaataaaatcaaat 73  Q
    ||||||||||||||| ||||| |||||||||||||||||||||||||| ||||||    
T  31840258 tgcatctaataatttgaaaaggggtttatatttagggacaaaaataaagtcaaat 31840312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 19 - 93
Target Start/End: Original strand, 50782935 - 50783008
Alignment:
Q  19 tgcatctaataatttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtgcttacatatagggac 93  Q
    |||||||| ||| |||||||| |||| ||||||||| |||||||||||||||||| |||||||| ||||||||||    
T  50782935 tgcatctagtaacttaaaaaggggtt-atatttaggaacaaaaataaaatcaaatgggtgcttagatatagggac 50783008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 22 - 103
Target Start/End: Complemental strand, 54701233 - 54701152
Alignment:
Q  22 atctaataatttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtgcttacatatagggacagaaagaata 103  Q
    ||||| |||||| |||||||||||| ||||| ||||||||||||| ||||||  ||||||| ||||| |||| |||||||||    
T  54701233 atctagtaatttgaaaagaggtttacatttatggacaaaaataaagtcaaatgagtgcttagatataaggacggaaagaata 54701152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 22 - 93
Target Start/End: Original strand, 20792157 - 20792228
Alignment:
Q  22 atctaataatttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtgcttacatatagggac 93  Q
    ||||| |||||||||||||| |||| |||||||  ||||||||||||||||| |||| ||| ||||||||||    
T  20792157 atctagtaatttaaaaagagatttacatttaggatcaaaaataaaatcaaatgggtgtttagatatagggac 20792228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 22 - 93
Target Start/End: Complemental strand, 52198667 - 52198597
Alignment:
Q  22 atctaataatttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtgcttacatatagggac 93  Q
    ||||| |||||| ||||| |||||| |||||||||||||| |||| |||||| |||||||||||||||||||    
T  52198667 atctagtaatttgaaaaggggtttacatttagggacaaaactaaa-tcaaatgggtgcttacatatagggac 52198597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 35 - 93
Target Start/End: Complemental strand, 45628014 - 45627956
Alignment:
Q  35 aaaagaggtttatatttagggacaaaaataaaatcaaattggtgcttacatatagggac 93  Q
    ||||||| |||||||||| |||||||||||||||||||| | |||||| ||||||||||    
T  45628014 aaaagagatttatatttaaggacaaaaataaaatcaaatagatgcttagatatagggac 45627956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 28 - 70
Target Start/End: Complemental strand, 56077238 - 56077196
Alignment:
Q  28 taatttaaaaagaggtttatatttagggacaaaaataaaatca 70  Q
    ||||||||||| |||||||||||||||||||||||||||||||    
T  56077238 taatttaaaaaaaggtttatatttagggacaaaaataaaatca 56077196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 73
Target Start/End: Original strand, 5933046 - 5933103
Alignment:
Q  16 aattgcatctaataatttaaaaagaggtttatatttagggacaaaaataaaatcaaat 73  Q
    ||||||||||| |||||| ||||||  |||||||||||||||||||||||| ||||||    
T  5933046 aattgcatctagtaatttgaaaagaaatttatatttagggacaaaaataaagtcaaat 5933103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 28 - 93
Target Start/End: Original strand, 21171895 - 21171960
Alignment:
Q  28 taatttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtgcttacatatagggac 93  Q
    |||||| |||||| ||||| |||||| |||| |||||||||||||| |||| ||||||||||||||    
T  21171895 taatttgaaaagaagtttacatttagagacataaataaaatcaaataggtggttacatatagggac 21171960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 21 - 73
Target Start/End: Original strand, 3113529 - 3113581
Alignment:
Q  21 catctaataatttaaaaagaggtttatatttagggacaaaaataaaatcaaat 73  Q
    ||||||||||||| |||  ||||||||||||||||||||||||||| ||||||    
T  3113529 catctaataatttgaaagaaggtttatatttagggacaaaaataaagtcaaat 3113581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 21 - 93
Target Start/End: Original strand, 5448824 - 5448895
Alignment:
Q  21 catctaataatttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtgcttacatatagggac 93  Q
    |||||||||||||| || | |||||| |||||||||||||||||||||||||  || ||||| ||||||||||    
T  5448824 catctaataatttagaagggggtttacatttagggacaaaaataaaatcaaa-cggggcttagatatagggac 5448895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 19 - 90
Target Start/End: Original strand, 25477388 - 25477459
Alignment:
Q  19 tgcatctaataatttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtgcttacatatagg 90  Q
    |||||||| |||||| |||| | || || ||||||||||||||||||||||||||  ||||||| |||||||    
T  25477388 tgcatctagtaatttgaaaataagtatacatttagggacaaaaataaaatcaaatgagtgcttagatatagg 25477459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 19 - 85
Target Start/End: Complemental strand, 33246440 - 33246374
Alignment:
Q  19 tgcatctaataattt-aaaaagaggtttatatttagggacaaaaataaaatcaaattggtgcttacat 85  Q
    |||||||| |||||| |||||||| |||| |||||||||||||||||||||||||| |||| ||||||    
T  33246440 tgcatctagtaatttgaaaaagag-tttacatttagggacaaaaataaaatcaaatgggtggttacat 33246374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 22 - 93
Target Start/End: Original strand, 43800974 - 43801045
Alignment:
Q  22 atctaataatttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtgcttacatatagggac 93  Q
    ||||| |||||| ||| | |||||| ||||||||||||||||||| |||||| || ||||| ||||||||||    
T  43800974 atctagtaatttgaaagggggtttacatttagggacaaaaataaagtcaaatgggggcttagatatagggac 43801045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 22 - 73
Target Start/End: Original strand, 51787936 - 51787987
Alignment:
Q  22 atctaataatttaaaaagaggtttatatttagggacaaaaataaaatcaaat 73  Q
    ||||| ||||||||||||  ||||||||||| ||||||||||||||||||||    
T  51787936 atctagtaatttaaaaaggagtttatatttaaggacaaaaataaaatcaaat 51787987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 93
Target Start/End: Complemental strand, 31937036 - 31936962
Alignment:
Q  19 tgcatctaataatttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtgcttacatatagggac 93  Q
    |||||||| |||||| ||||| | |||| ||||||||||||||||||| | |||| | |||||| ||||||||||    
T  31937036 tgcatctagtaatttgaaaagggatttacatttagggacaaaaataaagttaaatagatgcttagatatagggac 31936962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 93
Target Start/End: Complemental strand, 40411285 - 40411211
Alignment:
Q  19 tgcatctaataatttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtgcttacatatagggac 93  Q
    |||||||| |||||| |||||  ||||| | |||||||||||||||||||||||| | |||||| ||||| ||||    
T  40411285 tgcatctagtaatttgaaaaggagtttacaattagggacaaaaataaaatcaaatggatgcttaaatatatggac 40411211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 23 - 89
Target Start/End: Original strand, 54438677 - 54438743
Alignment:
Q  23 tctaataatttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtgcttacatatag 89  Q
    |||| |||||| ||||||| |||| ||||||||||||||||||||| |||| | |||||| ||||||    
T  54438677 tctactaatttgaaaagagatttacatttagggacaaaaataaaataaaatggatgcttagatatag 54438743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 19 - 88
Target Start/End: Complemental strand, 3684130 - 3684061
Alignment:
Q  19 tgcatctaataatttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtgcttacatata 88  Q
    ||||| |||||||||||||| |  |||||||||| ||||||||||||| ||||||  ||||||| |||||    
T  3684130 tgcatttaataatttaaaaataaatttatatttaaggacaaaaataaagtcaaatatgtgcttagatata 3684061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 28 - 93
Target Start/End: Original strand, 11792607 - 11792671
Alignment:
Q  28 taatttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtgcttacatatagggac 93  Q
    ||||||||||| ||||||| ||||| |||||||||||||||||||| |||| ||| ||||| ||||    
T  11792607 taatttaaaaa-aggtttacatttaaggacaaaaataaaatcaaatgggtgtttaaatatatggac 11792671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 28 - 93
Target Start/End: Original strand, 11861274 - 11861338
Alignment:
Q  28 taatttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtgcttacatatagggac 93  Q
    ||||||||||| ||||||| ||||| |||||||||||||||||||| |||| ||| ||||| ||||    
T  11861274 taatttaaaaa-aggtttacatttaaggacaaaaataaaatcaaatgggtgtttaaatatatggac 11861338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 19 - 88
Target Start/End: Original strand, 22651627 - 22651696
Alignment:
Q  19 tgcatctaataatttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtgcttacatata 88  Q
    |||||||| |||||| |||||  ||||| ||||| ||| |||||||||||||||| |||| |||||||||    
T  22651627 tgcatctagtaatttgaaaaggagtttacatttaaggataaaaataaaatcaaatgggtgattacatata 22651696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 28 - 93
Target Start/End: Complemental strand, 23611407 - 23611343
Alignment:
Q  28 taatttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtgcttacatatagggac 93  Q
    ||||||||||| ||||||| ||||| |||||||||||||||||||| |||| ||| ||||| ||||    
T  23611407 taatttaaaaa-aggtttacatttaaggacaaaaataaaatcaaatgggtgtttaaatatatggac 23611343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 28 - 93
Target Start/End: Complemental strand, 50438247 - 50438182
Alignment:
Q  28 taatttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtgcttacatatagggac 93  Q
    |||||| ||||| |||||| ||||||||||||||||||||  |||  |||| ||||||||||||||    
T  50438247 taatttgaaaaggggtttacatttagggacaaaaataaaaataaaagggtgattacatatagggac 50438182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 90
Target Start/End: Original strand, 26203297 - 26203365
Alignment:
Q  22 atctaataatttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtgcttacatatagg 90  Q
    |||||||||||| |||||  ||||| ||||| |||||||| ||||||||||| | || |||||||||||    
T  26203297 atctaataatttgaaaaggagtttacatttaaggacaaaagtaaaatcaaatggatgattacatatagg 26203365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 28 - 88
Target Start/End: Complemental strand, 39813891 - 39813831
Alignment:
Q  28 taatttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtgcttacatata 88  Q
    |||||| |||||  ||||| |||||||||||||||||||||||||| | || |||||||||    
T  39813891 taatttgaaaaggagtttacatttagggacaaaaataaaatcaaatggatggttacatata 39813831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 48 - 88
Target Start/End: Complemental strand, 51918568 - 51918528
Alignment:
Q  48 atttagggacaaaaataaaatcaaattggtgcttacatata 88  Q
    |||||||||||||||||||||||||| |||||||| |||||    
T  51918568 atttagggacaaaaataaaatcaaatgggtgcttagatata 51918528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 19 - 82
Target Start/End: Complemental strand, 10602152 - 10602089
Alignment:
Q  19 tgcatctaataatttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtgctta 82  Q
    |||||||| ||||||||||||  ||||| ||||| ||||||||||||| | |||| ||||||||    
T  10602152 tgcatctagtaatttaaaaaggagtttacatttatggacaaaaataaagtaaaatgggtgctta 10602089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 59
Target Start/End: Original strand, 7002347 - 7002385
Alignment:
Q  21 catctaataatttaaaaagaggtttatatttagggacaa 59  Q
    |||||| |||||| |||||||||||||||||||||||||    
T  7002347 catctagtaatttgaaaagaggtttatatttagggacaa 7002385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 30153166 - 30153112
Alignment:
Q  19 tgcatctaataatttaaaaagaggtttatatttagggacaaaaataaaatcaaat 73  Q
    ||||||||||||||||||||  | |||| |||||| |||||||||||| ||||||    
T  30153166 tgcatctaataatttaaaaatggatttacatttagagacaaaaataaagtcaaat 30153112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 93
Target Start/End: Original strand, 31917538 - 31917612
Alignment:
Q  19 tgcatctaataatttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtgcttacatatagggac 93  Q
    |||||||| |||||| ||||  |||||| ||||| ||| ||||||||||||||||  ||||||| ||||| ||||    
T  31917538 tgcatctagtaatttgaaaaagggtttacatttaaggataaaaataaaatcaaatgagtgcttaaatataaggac 31917612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 66
Target Start/End: Original strand, 32236998 - 32237043
Alignment:
Q  21 catctaataatttaaaaagaggtttatatttagggacaaaaataaa 66  Q
    |||||| |||||||||| | | ||||||||||||||||||||||||    
T  32236998 catctagtaatttaaaaggggatttatatttagggacaaaaataaa 32237043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 96
Target Start/End: Original strand, 54359845 - 54359922
Alignment:
Q  19 tgcatctaataatttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtgcttacatatagggacaga 96  Q
    |||||||| |||||| ||||| |||||| |||||  |||||||||||||| ||||  ||| ||| |||||| ||||||    
T  54359845 tgcatctagtaatttgaaaagtggtttacatttaaagacaaaaataaaattaaatgagtgtttagatatagagacaga 54359922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 43 - 87
Target Start/End: Complemental strand, 39196951 - 39196907
Alignment:
Q  43 tttatatttagggacaaaaataaaatcaaattggtgcttacatat 87  Q
    |||| ||||||||||||||||||| |||||| |||||||| ||||    
T  39196951 tttacatttagggacaaaaataaagtcaaatgggtgcttagatat 39196907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 55; Significance: 2e-22; HSPs: 38)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 19 - 89
Target Start/End: Original strand, 3475612 - 3475682
Alignment:
Q  19 tgcatctaataatttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtgcttacatatag 89  Q
    |||||||| ||| |||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||    
T  3475612 tgcatctagtaagttaaaaagaggtttatatttagggacaaaaataaaatcaaatgggtgcttagatatag 3475682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 19 - 93
Target Start/End: Complemental strand, 20945244 - 20945170
Alignment:
Q  19 tgcatctaataatttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtgcttacatatagggac 93  Q
    |||||||| |||||| ||||| |||||| ||||||||||||||||||| |||||| |||||||| ||||||||||    
T  20945244 tgcatctagtaatttgaaaaggggtttacatttagggacaaaaataaagtcaaatgggtgcttagatatagggac 20945170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 19 - 93
Target Start/End: Original strand, 35145394 - 35145467
Alignment:
Q  19 tgcatctaataatttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtgcttacatatagggac 93  Q
    |||||||| |||||| ||||||| ||||||||||||||||||||||||||||||| | |||||| ||||||||||    
T  35145394 tgcatctagtaatttgaaaagag-tttatatttagggacaaaaataaaatcaaatggttgcttatatatagggac 35145467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 19 - 93
Target Start/End: Original strand, 46048685 - 46048759
Alignment:
Q  19 tgcatctaataatttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtgcttacatatagggac 93  Q
    |||||||| |||||| ||||| |||||| ||||||||||||||||||||||||||  ||||||| ||||||||||    
T  46048685 tgcatctattaatttgaaaaggggtttacatttagggacaaaaataaaatcaaatgagtgcttagatatagggac 46048759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 19 - 92
Target Start/End: Original strand, 31819568 - 31819641
Alignment:
Q  19 tgcatctaataatttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtgcttacatataggga 92  Q
    |||||||| |||||| ||||  || |||||||||||||||||||||||||||||| |||||||| |||||||||    
T  31819568 tgcatctagtaatttgaaaattgggttatatttagggacaaaaataaaatcaaataggtgcttagatataggga 31819641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 21 - 93
Target Start/End: Original strand, 11345484 - 11345556
Alignment:
Q  21 catctaataatttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtgcttacatatagggac 93  Q
    |||||| |||||| ||||| |||||| |||||||| ||||||||||||||||| |||||||| ||||||||||    
T  11345484 catctagtaatttgaaaaggggtttaaatttaggggcaaaaataaaatcaaatgggtgcttagatatagggac 11345556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 28 - 93
Target Start/End: Complemental strand, 29676676 - 29676611
Alignment:
Q  28 taatttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtgcttacatatagggac 93  Q
    |||||| ||| |||||||| ||||||||||||||||||||||||||  ||||||| ||||||||||    
T  29676676 taatttgaaatgaggtttacatttagggacaaaaataaaatcaaatgagtgcttagatatagggac 29676611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 19 - 82
Target Start/End: Original strand, 11140858 - 11140921
Alignment:
Q  19 tgcatctaataatttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtgctta 82  Q
    |||||||| |||||| |||||||||||| ||| ||||| |||||||||||||||| ||||||||    
T  11140858 tgcatctagtaatttgaaaagaggtttacattcagggataaaaataaaatcaaataggtgctta 11140921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 19 - 106
Target Start/End: Complemental strand, 12077685 - 12077598
Alignment:
Q  19 tgcatctaataatttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtgcttacatatagggacagaaagaatagta 106  Q
    |||||||| |||||| ||||| |||||| ||||| ||||||||||||||||||||  ||| ||| |||||||||| ||| || |||||    
T  12077685 tgcatctagtaatttgaaaaggggtttacatttaaggacaaaaataaaatcaaatgagtgattagatatagggacggaaggagtagta 12077598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 26999205 - 26999259
Alignment:
Q  19 tgcatctaataatttaaaaagaggtttatatttagggacaaaaataaaatcaaat 73  Q
    ||||||||||||||||||||| |||||| ||||  ||||||||||||||||||||    
T  26999205 tgcatctaataatttaaaaaggggtttacatttgaggacaaaaataaaatcaaat 26999259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 19 - 93
Target Start/End: Original strand, 28477546 - 28477620
Alignment:
Q  19 tgcatctaataatttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtgcttacatatagggac 93  Q
    |||||||| |||||| |||||||||||| |||||||| |||||||||| |||||| |  ||||| ||||||||||    
T  28477546 tgcatctagtaatttgaaaagaggtttacatttaggggcaaaaataaagtcaaatggaggcttagatatagggac 28477620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 29645486 - 29645540
Alignment:
Q  19 tgcatctaataatttaaaaagaggtttatatttagggacaaaaataaaatcaaat 73  Q
    |||||||| |||||| ||||| |||||| ||||||||||||||||||||||||||    
T  29645486 tgcatctagtaatttgaaaagtggtttacatttagggacaaaaataaaatcaaat 29645540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 19 - 93
Target Start/End: Original strand, 42891580 - 42891654
Alignment:
Q  19 tgcatctaataatttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtgcttacatatagggac 93  Q
    |||||||| |||||| || || |||||| ||||||||||||||||||| |||||| |||| |||| |||||||||    
T  42891580 tgcatctagtaatttgaagaggggtttacatttagggacaaaaataaagtcaaatgggtgtttacgtatagggac 42891654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 19 - 93
Target Start/End: Complemental strand, 43187045 - 43186971
Alignment:
Q  19 tgcatctaataatttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtgcttacatatagggac 93  Q
    |||||||| ||| || ||||| |||||||||||| |||||||| ||||||||||| | || ||||||||||||||    
T  43187045 tgcatctagtaaattgaaaaggggtttatatttaaggacaaaagtaaaatcaaatggatgtttacatatagggac 43186971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 21 - 94
Target Start/End: Original strand, 31474587 - 31474660
Alignment:
Q  21 catctaataatttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtgcttacatatagggaca 94  Q
    ||||||||||||||||||   |||||||||||| |||||||||||| |||||| | || ||| |||||||||||    
T  31474587 catctaataatttaaaaatgagtttatatttagagacaaaaataaagtcaaatagatgtttaaatatagggaca 31474660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 72
Target Start/End: Original strand, 40645834 - 40645887
Alignment:
Q  19 tgcatctaataatttaaaaagaggtttatatttagggacaaaaataaaatcaaa 72  Q
    ||||||||||||||| ||| |||||||||||||||||| ||||||||| |||||    
T  40645834 tgcatctaataatttgaaaggaggtttatatttagggataaaaataaagtcaaa 40645887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 42 - 93
Target Start/End: Complemental strand, 26517136 - 26517085
Alignment:
Q  42 gtttatatttagggacaaaaataaaatcaaattggtgcttacatatagggac 93  Q
    ||||| |||||||||||||||||||||||||| |||||||| ||||| ||||    
T  26517136 gtttacatttagggacaaaaataaaatcaaatgggtgcttagatatatggac 26517085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 19 - 94
Target Start/End: Complemental strand, 41727182 - 41727107
Alignment:
Q  19 tgcatctaataatttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtgcttacatatagggaca 94  Q
    ||||| || |||||||||||| |||||| ||||| | |||||| |||||||||||  ||| |||||||||||||||    
T  41727182 tgcatttagtaatttaaaaaggggtttacatttaagaacaaaagtaaaatcaaatgagtgtttacatatagggaca 41727107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 22 - 93
Target Start/End: Original strand, 44083792 - 44083863
Alignment:
Q  22 atctaataatttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtgcttacatatagggac 93  Q
    ||||| |||||| ||||  |||||| ||||||||||||||||||| |||||| | |||||| ||||||||||    
T  44083792 atctagtaatttgaaaatgggtttacatttagggacaaaaataaagtcaaatggatgcttagatatagggac 44083863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 19 - 82
Target Start/End: Original strand, 50092831 - 50092894
Alignment:
Q  19 tgcatctaataatttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtgctta 82  Q
    |||||||| |||||| |||| || |||||||||| ||||||||||||||| |||| ||||||||    
T  50092831 tgcatctattaatttgaaaatagatttatatttatggacaaaaataaaattaaatgggtgctta 50092894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 93
Target Start/End: Complemental strand, 14645833 - 14645759
Alignment:
Q  19 tgcatctaataatttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtgcttacatatagggac 93  Q
    ||||| || |||||||||||| |||||| ||||| | ||||||||||| |||||| |||||||| ||||| ||||    
T  14645833 tgcatatagtaatttaaaaaggggtttacatttaagaacaaaaataaagtcaaatgggtgcttagatataaggac 14645759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 93
Target Start/End: Complemental strand, 31531071 - 31530998
Alignment:
Q  19 tgcatctaataatttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtgcttacatatagggac 93  Q
    |||||||| |||||| |||||  ||||| |||||||||| |||||||| |||||| |||||||| ||||||||||    
T  31531071 tgcatctagtaatttgaaaaggagtttacatttagggac-aaaataaagtcaaatgggtgcttagatatagggac 31530998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 22 - 88
Target Start/End: Complemental strand, 34055806 - 34055740
Alignment:
Q  22 atctaataatttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtgcttacatata 88  Q
    ||||| |||||||||||| ||| || |||||| || |||||||||||||||| |||||||| |||||    
T  34055806 atctagtaatttaaaaaggggtatacatttagagaaaaaaataaaatcaaataggtgcttagatata 34055740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 39617196 - 39617142
Alignment:
Q  19 tgcatctaataatttaaaaagaggtttatatttagggacaaaaataaaatcaaat 73  Q
    |||||||||| ||||||||| ||||||| |||||| |||||||||||||| ||||    
T  39617196 tgcatctaatcatttaaaaaaaggtttacatttagtgacaaaaataaaatgaaat 39617142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 28 - 93
Target Start/End: Complemental strand, 11676130 - 11676066
Alignment:
Q  28 taatttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtgcttacatatagggac 93  Q
    ||||||||||| ||||||| ||||| |||||||||||||||||||| |||| ||| ||||| ||||    
T  11676130 taatttaaaaa-aggtttacatttaaggacaaaaataaaatcaaatgggtgtttaaatatatggac 11676066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 28 - 93
Target Start/End: Complemental strand, 30464956 - 30464892
Alignment:
Q  28 taatttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtgcttacatatagggac 93  Q
    ||||||||||| ||||||| ||||| |||||||||||||||||||| |||| ||| ||||| ||||    
T  30464956 taatttaaaaa-aggtttacatttaaggacaaaaataaaatcaaatgggtgtttaaatatatggac 30464892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 28 - 93
Target Start/End: Original strand, 33635116 - 33635180
Alignment:
Q  28 taatttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtgcttacatatagggac 93  Q
    ||||||||||| ||||||| ||||| |||||||||||||||||||| |||| ||| ||||| ||||    
T  33635116 taatttaaaaa-aggtttacatttaaggacaaaaataaaatcaaatgggtgtttaaatatatggac 33635180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 28 - 93
Target Start/End: Complemental strand, 37599756 - 37599692
Alignment:
Q  28 taatttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtgcttacatatagggac 93  Q
    ||||||||||| ||||||| ||||| |||||||||||||||||||| |||| ||| ||||| ||||    
T  37599756 taatttaaaaa-aggtttacatttaaggacaaaaataaaatcaaatgggtgtttaaatatatggac 37599692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 53 - 93
Target Start/End: Original strand, 30476221 - 30476261
Alignment:
Q  53 gggacaaaaataaaatcaaattggtgcttacatatagggac 93  Q
    ||||||||||||||||||||| |||||||| ||||||||||    
T  30476221 gggacaaaaataaaatcaaatgggtgcttagatatagggac 30476261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 22659742 - 22659796
Alignment:
Q  19 tgcatctaataatttaaaaagaggtttatatttagggacaaaaataaaatcaaat 73  Q
    |||||||| |||||||||||||| |||| |||| | |||||||||||| ||||||    
T  22659742 tgcatctagtaatttaaaaagagatttacatttggagacaaaaataaagtcaaat 22659796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 93
Target Start/End: Complemental strand, 27638017 - 27637967
Alignment:
Q  43 tttatatttagggacaaaaataaaatcaaattggtgcttacatatagggac 93  Q
    |||| ||||||||||||||| |||||||||| |||||||| || |||||||    
T  27638017 tttacatttagggacaaaaacaaaatcaaataggtgcttagatgtagggac 27637967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 93
Target Start/End: Complemental strand, 10259084 - 10259020
Alignment:
Q  28 taatttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtgcttacatatagggac 93  Q
    ||||||||||| | ||||| ||||| |||||||||||||||||||| |||| ||| ||||| ||||    
T  10259084 taatttaaaaa-atgtttacatttaaggacaaaaataaaatcaaatgggtgtttaaatatatggac 10259020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 93
Target Start/End: Complemental strand, 11335532 - 11335468
Alignment:
Q  28 taatttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtgcttacatatagggac 93  Q
    ||||||||||| ||||||| ||||| |||||||||||||| ||||| |||| ||| ||||| ||||    
T  11335532 taatttaaaaa-aggtttacatttaaggacaaaaataaaaccaaatgggtgtttaaatatatggac 11335468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 93
Target Start/End: Complemental strand, 23241732 - 23241668
Alignment:
Q  28 taatttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtgcttacatatagggac 93  Q
    ||||||||||| || |||| ||||| |||||||||||||||||||| |||| ||| ||||| ||||    
T  23241732 taatttaaaaaaag-tttacatttaaggacaaaaataaaatcaaatgggtgtttaaatatatggac 23241668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 93
Target Start/End: Original strand, 26725776 - 26725840
Alignment:
Q  28 taatttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtgcttacatatagggac 93  Q
    ||||||||||| ||||||| ||||| ||||||||||||||| |||| |||| ||| ||||| ||||    
T  26725776 taatttaaaaa-aggtttacatttaaggacaaaaataaaattaaatgggtgtttaaatatatggac 26725840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 73
Target Start/End: Complemental strand, 33987107 - 33987063
Alignment:
Q  28 taatttaaaaagaggtttatatttagggacaaaaataaaatcaaat 73  Q
    ||||||||||| ||||||| ||||| ||||||||||||||||||||    
T  33987107 taatttaaaaa-aggtttacatttaaggacaaaaataaaatcaaat 33987063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 88
Target Start/End: Complemental strand, 50524920 - 50524851
Alignment:
Q  19 tgcatctaataatttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtgcttacatata 88  Q
    |||||||  |||||| ||||  |||||| ||||| ||||||||||||| |||||| |||||||| |||||    
T  50524920 tgcatcttgtaatttgaaaaagggtttagatttaaggacaaaaataaagtcaaatgggtgcttagatata 50524851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 93
Target Start/End: Complemental strand, 55257972 - 55257908
Alignment:
Q  28 taatttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtgcttacatatagggac 93  Q
    ||||||||||| || |||| ||||| |||||||||||||||||||| |||| ||| ||||| ||||    
T  55257972 taatttaaaaaaag-tttacatttaaggacaaaaataaaatcaaatgggtgtttaaatatatggac 55257908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 54; Significance: 6e-22; HSPs: 36)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 19 - 96
Target Start/End: Original strand, 37355200 - 37355277
Alignment:
Q  19 tgcatctaataatttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtgcttacatatagggacaga 96  Q
    |||||||| |||||| ||||| ||||||||||||| ||||||||||||||||||| |||||||| |||||||||||||    
T  37355200 tgcatctagtaatttgaaaaggggtttatatttagagacaaaaataaaatcaaatgggtgcttagatatagggacaga 37355277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 19 - 93
Target Start/End: Original strand, 17663787 - 17663861
Alignment:
Q  19 tgcatctaataatttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtgcttacatatagggac 93  Q
    |||||||| |||||| |||||  ||||| |||||||||||||||||||||||||| |||||||||||||||||||    
T  17663787 tgcatctagtaatttgaaaaggagtttacatttagggacaaaaataaaatcaaatgggtgcttacatatagggac 17663861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 19 - 93
Target Start/End: Original strand, 20362145 - 20362219
Alignment:
Q  19 tgcatctaataatttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtgcttacatatagggac 93  Q
    |||||||| |||||| |||||  ||||| |||||||||||||||||||||||||| |||||||||||||||||||    
T  20362145 tgcatctagtaatttgaaaaggagtttacatttagggacaaaaataaaatcaaatgggtgcttacatatagggac 20362219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 19 - 92
Target Start/End: Original strand, 44421896 - 44421969
Alignment:
Q  19 tgcatctaataatttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtgcttacatataggga 92  Q
    |||||||||||||||| |||| |||||| |||||| ||||||||||||||||||| |||||||| |||||||||    
T  44421896 tgcatctaataatttagaaaggggtttacatttagagacaaaaataaaatcaaataggtgcttagatataggga 44421969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 19 - 93
Target Start/End: Original strand, 3237878 - 3237952
Alignment:
Q  19 tgcatctaataatttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtgcttacatatagggac 93  Q
    |||||||| ||||||||||||  ||||| |||||||||||||||||||||||||| | |||||| ||||||||||    
T  3237878 tgcatctagtaatttaaaaaggagtttacatttagggacaaaaataaaatcaaatggatgcttagatatagggac 3237952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 19 - 93
Target Start/End: Original strand, 28733986 - 28734060
Alignment:
Q  19 tgcatctaataatttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtgcttacatatagggac 93  Q
    ||||| || |||||| |||||||||||| ||||||||||||||||||| |||||| |||||||| ||||||||||    
T  28733986 tgcatatagtaatttgaaaagaggtttagatttagggacaaaaataaagtcaaatgggtgcttagatatagggac 28734060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 19 - 89
Target Start/End: Original strand, 534628 - 534698
Alignment:
Q  19 tgcatctaataatttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtgcttacatatag 89  Q
    |||||||| |||||| |||||||||||| ||||| |||||||||||||||||||| | |||||| ||||||    
T  534628 tgcatctagtaatttgaaaagaggtttacatttaaggacaaaaataaaatcaaatggatgcttaaatatag 534698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 19 - 93
Target Start/End: Original strand, 41865878 - 41865952
Alignment:
Q  19 tgcatctaataatttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtgcttacatatagggac 93  Q
    ||||||||||||||| |||||  ||||| ||||||| ||||||||||||||||||  ||||||| ||||||||||    
T  41865878 tgcatctaataatttgaaaaggtgtttacatttaggaacaaaaataaaatcaaatgagtgcttaaatatagggac 41865952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 19 - 92
Target Start/End: Original strand, 27297740 - 27297813
Alignment:
Q  19 tgcatctaataatttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtgcttacatataggga 92  Q
    |||||||| |||||| |||||  ||||| ||||| |||||||||||||||||||||||| |||| |||||||||    
T  27297740 tgcatctactaatttgaaaaggagtttacatttaaggacaaaaataaaatcaaattggtacttagatataggga 27297813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 19 - 96
Target Start/End: Complemental strand, 31644385 - 31644308
Alignment:
Q  19 tgcatctaataatttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtgcttacatatagggacaga 96  Q
    |||||||| |||||| ||||   ||||| |||||||||||||||||||||||||| |||||||| ||||| |||||||    
T  31644385 tgcatctagtaatttgaaaatgagtttacatttagggacaaaaataaaatcaaatgggtgcttagatataaggacaga 31644308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 38982013 - 38981961
Alignment:
Q  19 tgcatctaataatttaaaaagaggtttatatttagggacaaaaataaaatcaa 71  Q
    ||||||||||||||||||||  |||||| ||||||||||||||||||||||||    
T  38982013 tgcatctaataatttaaaaatgggtttagatttagggacaaaaataaaatcaa 38981961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 22 - 93
Target Start/End: Original strand, 24775031 - 24775102
Alignment:
Q  22 atctaataatttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtgcttacatatagggac 93  Q
    ||||| |||||  ||||||| |||| |||||||||||||||||||||||||| | |||||| ||||||||||    
T  24775031 atctagtaattcgaaaagagatttaaatttagggacaaaaataaaatcaaatggatgcttaaatatagggac 24775102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 19 - 93
Target Start/End: Complemental strand, 7278555 - 7278481
Alignment:
Q  19 tgcatctaataatttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtgcttacatatagggac 93  Q
    |||||||| |||||| ||||| | |||| |||||| || ||||||||||||||||||||||||| ||||| ||||    
T  7278555 tgcatctagtaatttgaaaagggatttacatttagagataaaaataaaatcaaattggtgcttagatatatggac 7278481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 19 - 93
Target Start/End: Original strand, 27749630 - 27749704
Alignment:
Q  19 tgcatctaataatttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtgcttacatatagggac 93  Q
    |||||||  |||||| |||||  ||||| |||||||||||||||||||||||||| |||||||| ||||| ||||    
T  27749630 tgcatcttgtaatttgaaaaggagtttacatttagggacaaaaataaaatcaaatgggtgcttagatataaggac 27749704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 19 - 93
Target Start/End: Complemental strand, 41327746 - 41327672
Alignment:
Q  19 tgcatctaataatttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtgcttacatatagggac 93  Q
    |||||||| |||||| ||||||| |||| ||||| ||||||||||||| |||||| |||||||| ||||| ||||    
T  41327746 tgcatctagtaatttgaaaagagatttacatttatggacaaaaataaagtcaaatgggtgcttagatatatggac 41327672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 88
Target Start/End: Original strand, 44424756 - 44424825
Alignment:
Q  19 tgcatctaataatttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtgcttacatata 88  Q
    |||||||| |||||| ||||  |||||| |||||||||||||||||||||||||| | |||||| |||||    
T  44424756 tgcatctagtaatttgaaaaagggtttacatttagggacaaaaataaaatcaaatggatgcttagatata 44424825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 21 - 69
Target Start/End: Original strand, 11459319 - 11459367
Alignment:
Q  21 catctaataatttaaaaagaggtttatatttagggacaaaaataaaatc 69  Q
    ||||||||||||||||||||| |||||||||| ||| ||||||||||||    
T  11459319 catctaataatttaaaaagagatttatatttaaggataaaaataaaatc 11459367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 89
Target Start/End: Complemental strand, 2048772 - 2048702
Alignment:
Q  19 tgcatctaataatttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtgcttacatatag 89  Q
    ||||||||||||||| |||| || |||| ||||||  |||||||||||||||||| | |||||| ||||||    
T  2048772 tgcatctaataatttgaaaaaagatttacatttagaaacaaaaataaaatcaaatggatgcttaaatatag 2048702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 93
Target Start/End: Original strand, 15851695 - 15851768
Alignment:
Q  19 tgcatctaataatttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtgcttacatatagggac 93  Q
    |||||||| |||||| |||||  ||||| ||||||||| ||||||||||||||| ||| ||||| ||||||||||    
T  15851695 tgcatctagtaatttgaaaaggagtttacatttagggagaaaaataaaatcaaa-tggggcttagatatagggac 15851768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 28 - 78
Target Start/End: Complemental strand, 37314812 - 37314763
Alignment:
Q  28 taatttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtg 78  Q
    ||||||||||| ||||||||||||| |||||||||||||||||||| ||||    
T  37314812 taatttaaaaa-aggtttatatttaaggacaaaaataaaatcaaatgggtg 37314763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 16 - 93
Target Start/End: Original strand, 247820 - 247897
Alignment:
Q  16 aattgcatctaataatttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtgcttacatatagggac 93  Q
    ||||||||||| |||||| |||||  ||||| |||||| || |||| |||| |||||| |||||||| ||||||||||    
T  247820 aattgcatctactaatttgaaaaggagtttacatttagagataaaactaaagtcaaatgggtgcttagatatagggac 247897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 93
Target Start/End: Complemental strand, 43119306 - 43119234
Alignment:
Q  21 catctaataatttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtgcttacatatagggac 93  Q
    |||||| |||||| ||||||| ||||||||||||||||||  |  | |||||| | |||||||||||||||||    
T  43119306 catctagtaatttgaaaagagatttatatttagggacaaatttttagtcaaatagatgcttacatatagggac 43119234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 29 - 93
Target Start/End: Complemental strand, 45150674 - 45150610
Alignment:
Q  29 aatttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtgcttacatatagggac 93  Q
    ||||| |||||  ||||| ||||||||||||||||||||||||||  ||| ||| ||||||||||    
T  45150674 aatttgaaaaggagtttacatttagggacaaaaataaaatcaaatgagtgattaaatatagggac 45150610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 22 - 93
Target Start/End: Original strand, 3645485 - 3645556
Alignment:
Q  22 atctaataatttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtgcttacatatagggac 93  Q
    |||||||||||| ||||| |  ||| ||||||||| ||||| |||||||||| |||||||| ||||| ||||    
T  3645485 atctaataatttgaaaagggacttacatttagggataaaaagaaaatcaaatgggtgcttagatataaggac 3645556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 22 - 93
Target Start/End: Complemental strand, 8065012 - 8064941
Alignment:
Q  22 atctaataatttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtgcttacatatagggac 93  Q
    ||||| |||||| ||| | |||||| |||||||||||| |||||| |||||| || ||||| ||||||||||    
T  8065012 atctagtaatttgaaagggggtttacatttagggacaataataaagtcaaatgggggcttaaatatagggac 8064941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 19 - 70
Target Start/End: Complemental strand, 28264895 - 28264844
Alignment:
Q  19 tgcatctaataatttaaaaagaggtttatatttagggacaaaaataaaatca 70  Q
    |||||||| |||||| |||||||||||| ||| | |||||||||||||||||    
T  28264895 tgcatctagtaatttgaaaagaggtttacattaaaggacaaaaataaaatca 28264844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 28 - 91
Target Start/End: Original strand, 31900638 - 31900700
Alignment:
Q  28 taatttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtgcttacatataggg 91  Q
    ||||||||||| | ||||| ||||| |||||||||||||||||||| |||| ||| ||||||||    
T  31900638 taatttaaaaa-atgtttacatttaaggacaaaaataaaatcaaatgggtgtttaaatataggg 31900700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 42 - 93
Target Start/End: Original strand, 41665894 - 41665945
Alignment:
Q  42 gtttatatttagggacaaaaataaaatcaaattggtgcttacatatagggac 93  Q
    ||||| ||||||||||||||||||| |||||| || ||||| ||||||||||    
T  41665894 gtttacatttagggacaaaaataaagtcaaatgggagcttagatatagggac 41665945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 89
Target Start/End: Original strand, 4758189 - 4758259
Alignment:
Q  19 tgcatctaataatttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtgcttacatatag 89  Q
    ||||||||||||| | ||||||  |||| ||||||  |||||||||||||||||  |||| ||||||||||    
T  4758189 tgcatctaataatctgaaaagaaatttacatttagaaacaaaaataaaatcaaacgggtggttacatatag 4758259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 11071832 - 11071886
Alignment:
Q  19 tgcatctaataatttaaaaagaggtttatatttagggacaaaaataaaatcaaat 73  Q
    |||||||| |||||| |||||  ||||| ||||||||||||||||||| ||||||    
T  11071832 tgcatctagtaatttgaaaaggagtttagatttagggacaaaaataaagtcaaat 11071886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 12417611 - 12417557
Alignment:
Q  19 tgcatctaataatttaaaaagaggtttatatttagggacaaaaataaaatcaaat 73  Q
    ||||||||||||||| |||| | |||||||||||  |||||||||||| ||||||    
T  12417611 tgcatctaataatttgaaaaaatgtttatatttaaagacaaaaataaagtcaaat 12417557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 12429671 - 12429617
Alignment:
Q  19 tgcatctaataatttaaaaagaggtttatatttagggacaaaaataaaatcaaat 73  Q
    ||||||||||||||| |||| | |||||||||||  |||||||||||| ||||||    
T  12429671 tgcatctaataatttgaaaaaatgtttatatttaaagacaaaaataaagtcaaat 12429617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 89
Target Start/End: Original strand, 23464845 - 23464914
Alignment:
Q  19 tgcatctaataatttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtgcttacatatag 89  Q
    |||||||| |||||||||| ||| |||| ||||||||||||||||||| | ||||  ||| ||||||||||    
T  23464845 tgcatctagtaatttaaaa-gagatttacatttagggacaaaaataaagttaaatgagtgtttacatatag 23464914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 96
Target Start/End: Complemental strand, 17250902 - 17250826
Alignment:
Q  19 tgcatctaataatttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtgcttacatatagggacaga 96  Q
    ||||| || ||||||||||||  ||||| |||||| |||||||||||||| ||||  ||| |||||||| ||||||||    
T  17250902 tgcatatagtaatttaaaaaggagtttacatttagagacaaaaataaaattaaatgagtgtttacatat-gggacaga 17250826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 93
Target Start/End: Original strand, 17513253 - 17513317
Alignment:
Q  28 taatttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtgcttacatatagggac 93  Q
    ||||||||||| ||||||| |||||  ||||||||||||||||||| |||| ||| ||||| ||||    
T  17513253 taatttaaaaa-aggtttacatttaaagacaaaaataaaatcaaatgggtgtttaaatatatggac 17513317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 73
Target Start/End: Original strand, 24128986 - 24129030
Alignment:
Q  28 taatttaaaaagaggtttatatttagggacaaaaataaaatcaaat 73  Q
    ||||||||||| ||||||| ||||| ||||||||||||||||||||    
T  24128986 taatttaaaaa-aggtttacatttaaggacaaaaataaaatcaaat 24129030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 22 - 96
Target Start/End: Original strand, 25865 - 25939
Alignment:
Q  22 atctaataatttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtgcttacatatagggacaga 96  Q
    ||||| |||||| |||||||||||| |||||||||||||| ||||||||||| |||||||||||||||| |||||    
T  25865 atctagtaatttgaaaagaggtttacatttagggacaaaactaaaatcaaataggtgcttacatataggaacaga 25939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 51; Significance: 4e-20; HSPs: 33)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 19 - 93
Target Start/End: Original strand, 26633009 - 26633083
Alignment:
Q  19 tgcatctaataatttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtgcttacatatagggac 93  Q
    |||||||| |||||| |||||| || || |||||||||||||||||||||||||| |||||||||||||||||||    
T  26633009 tgcatctagtaatttgaaaagaagtctacatttagggacaaaaataaaatcaaatgggtgcttacatatagggac 26633083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 19 - 93
Target Start/End: Complemental strand, 18121985 - 18121912
Alignment:
Q  19 tgcatctaataatttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtgcttacatatagggac 93  Q
    |||||||| |||||||||||| |||||| ||||||||||||||||||| ||||||  ||||||||||||||||||    
T  18121985 tgcatctagtaatttaaaaag-ggtttacatttagggacaaaaataaagtcaaatgcgtgcttacatatagggac 18121912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 19 - 88
Target Start/End: Original strand, 35128548 - 35128617
Alignment:
Q  19 tgcatctaataatttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtgcttacatata 88  Q
    |||||||| |||||| |||||||||||| ||||||||||||||||||||||||||  ||||||| |||||    
T  35128548 tgcatctagtaatttgaaaagaggtttacatttagggacaaaaataaaatcaaatgagtgcttaaatata 35128617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 23 - 93
Target Start/End: Complemental strand, 2276517 - 2276447
Alignment:
Q  23 tctaataatttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtgcttacatatagggac 93  Q
    |||| |||||| ||||| | |||| |||||||||||||||||||||||||| |||||||| ||||||||||    
T  2276517 tctagtaatttgaaaagcgatttacatttagggacaaaaataaaatcaaatgggtgcttatatatagggac 2276447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 19 - 93
Target Start/End: Original strand, 10685247 - 10685321
Alignment:
Q  19 tgcatctaataatttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtgcttacatatagggac 93  Q
    |||||||| |||||| ||||| |||||| ||||||||||||||||||||||||||  ||||||| ||||| ||||    
T  10685247 tgcatctagtaatttgaaaaggggtttacatttagggacaaaaataaaatcaaatgagtgcttagatataaggac 10685321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 19 - 93
Target Start/End: Original strand, 21388405 - 21388479
Alignment:
Q  19 tgcatctaataatttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtgcttacatatagggac 93  Q
    |||||||| ||||||  |||| |||||| |||||| ||||||||||||||||||| |||||||| ||||||||||    
T  21388405 tgcatctagtaatttggaaaggggtttacatttagagacaaaaataaaatcaaatgggtgcttaaatatagggac 21388479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 19 - 93
Target Start/End: Original strand, 48767728 - 48767802
Alignment:
Q  19 tgcatctaataatttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtgcttacatatagggac 93  Q
    |||||||| |||||| ||| | |||||| |||||||||||||||||||||||||| || ||||| ||||||||||    
T  48767728 tgcatctagtaatttgaaagggggtttacatttagggacaaaaataaaatcaaatgggggcttagatatagggac 48767802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 19 - 88
Target Start/End: Original strand, 34118173 - 34118242
Alignment:
Q  19 tgcatctaataatttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtgcttacatata 88  Q
    |||||||| ||||||||||| | ||||| |||||| |||||||||||| |||||| ||||||||||||||    
T  34118173 tgcatctagtaatttaaaaaaaagtttacatttagagacaaaaataaagtcaaataggtgcttacatata 34118242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 21 - 93
Target Start/End: Complemental strand, 5333839 - 5333767
Alignment:
Q  21 catctaataatttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtgcttacatatagggac 93  Q
    |||||| |||||||||||| |||||| ||||||||||||||||||| ||||||   || ||||||||||||||    
T  5333839 catctagtaatttaaaaaggggtttacatttagggacaaaaataaagtcaaatgtatgtttacatatagggac 5333767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 21 - 96
Target Start/End: Original strand, 1324872 - 1324947
Alignment:
Q  21 catctaataatttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtgcttacatatagggacaga 96  Q
    |||||| |||||| ||| | |||||| ||||||||||||||||||||| |||| || ||||| |||||||||||||    
T  1324872 catctagtaatttgaaagggggtttacatttagggacaaaaataaaataaaatgggggcttagatatagggacaga 1324947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 19 - 93
Target Start/End: Complemental strand, 4089443 - 4089369
Alignment:
Q  19 tgcatctaataattt-aaaaagaggtttatatttagggacaaaaataaaatcaaattggtgcttacatatagggac 93  Q
    |||||||| |||||| |||||||| |||| |||||||||||||||||||||||||| |||| ||| ||||||||||    
T  4089443 tgcatctagtaattttaaaaagag-tttacatttagggacaaaaataaaatcaaatgggtgtttagatatagggac 4089369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 19 - 93
Target Start/End: Complemental strand, 19236007 - 19235933
Alignment:
Q  19 tgcatctaataatttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtgcttacatatagggac 93  Q
    |||||||| |||||| |||||  ||||| ||||||||||||||||||| ||||||  ||||||| ||||||||||    
T  19236007 tgcatctagtaatttgaaaaggagtttacatttagggacaaaaataaagtcaaatgagtgcttagatatagggac 19235933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 195 - 256
Target Start/End: Original strand, 10396106 - 10396167
Alignment:
Q  195 aacactatcttcaattccacttgctcttgtgtgtgtaaaagttttctacatagaaagcttag 256  Q
    ||||||||| |||| |||||||||||||||  ||| |||||||| |||||||||||||||||    
T  10396106 aacactatcatcaagtccacttgctcttgttggtgaaaaagtttcctacatagaaagcttag 10396167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 96
Target Start/End: Complemental strand, 29635983 - 29635906
Alignment:
Q  19 tgcatctaataatttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtgcttacatatagggacaga 96  Q
    ||||||||||||||| ||||  | |||| ||||||||||||||||||| ||| || |||||||| ||||| |||||||    
T  29635983 tgcatctaataatttgaaaatggatttacatttagggacaaaaataaagtcacatgggtgcttagatataaggacaga 29635906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 22 - 93
Target Start/End: Complemental strand, 43601107 - 43601036
Alignment:
Q  22 atctaataatttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtgcttacatatagggac 93  Q
    ||||| |||||| ||||| |||||| ||||| ||||||||||||| ||||||  ||||||| ||||||||||    
T  43601107 atctagtaatttgaaaagtggtttacatttatggacaaaaataaagtcaaatgagtgcttaaatatagggac 43601036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 19 - 93
Target Start/End: Original strand, 49100837 - 49100912
Alignment:
Q  19 tgcatctaataatttaaaaagagg-tttatatttagggacaaaaataaaatcaaattggtgcttacatatagggac 93  Q
    ||||| || |||||||||||| || |||| | |||||||||||||||||||||||| |||||||| ||||| ||||    
T  49100837 tgcatatagtaatttaaaaagggggtttacaattagggacaaaaataaaatcaaatgggtgcttagatatatggac 49100912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 21 - 94
Target Start/End: Complemental strand, 6376072 - 6375999
Alignment:
Q  21 catctaataatttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtgcttacatatagggaca 94  Q
    |||||||||||||||||| |  |||| | ||||||||||||||||||||||||  ||| ||| |||||| ||||    
T  6376072 catctaataatttaaaaaaaaatttagagttagggacaaaaataaaatcaaatcagtgtttaaatatagagaca 6375999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 48 - 93
Target Start/End: Original strand, 20124364 - 20124409
Alignment:
Q  48 atttagggacaaaaataaaatcaaattggtgcttacatatagggac 93  Q
    ||||||||||||||||||||||||||  ||||||| ||||||||||    
T  20124364 atttagggacaaaaataaaatcaaatgagtgcttaaatatagggac 20124409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 19 - 92
Target Start/End: Complemental strand, 36726114 - 36726041
Alignment:
Q  19 tgcatctaataatttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtgcttacatataggga 92  Q
    |||||||| |||||| |||   |||||| |||||| ||||||||||||||||||| || ||||| |||||||||    
T  36726114 tgcatctagtaatttgaaagtgggtttacatttagagacaaaaataaaatcaaatgggggcttagatataggga 36726041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 19 - 82
Target Start/End: Original strand, 8318694 - 8318757
Alignment:
Q  19 tgcatctaataatttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtgctta 82  Q
    |||||||| |||||| ||||| |||||| ||||||||||||||||||  |||||| | ||||||    
T  8318694 tgcatctagtaatttgaaaaggggtttacatttagggacaaaaataacgtcaaatggatgctta 8318757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 42 - 93
Target Start/End: Original strand, 21759906 - 21759957
Alignment:
Q  42 gtttatatttagggacaaaaataaaatcaaattggtgcttacatatagggac 93  Q
    ||||| ||||||||||||| |||||||||||| | | |||||||||||||||    
T  21759906 gtttacatttagggacaaacataaaatcaaatggattcttacatatagggac 21759957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 42 - 89
Target Start/End: Original strand, 25750552 - 25750599
Alignment:
Q  42 gtttatatttagggacaaaaataaaatcaaattggtgcttacatatag 89  Q
    |||||||||||| |||||||||||| |||||| |||||||| ||||||    
T  25750552 gtttatatttagagacaaaaataaagtcaaatcggtgcttagatatag 25750599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 21 - 72
Target Start/End: Original strand, 37673902 - 37673953
Alignment:
Q  21 catctaataatttaaaaagaggtttatatttagggacaaaaataaaatcaaa 72  Q
    |||||| ||||||||||||  ||||| |||||| ||||||||||||||||||    
T  37673902 catctagtaatttaaaaaggagtttacatttagagacaaaaataaaatcaaa 37673953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 42 - 93
Target Start/End: Complemental strand, 42983533 - 42983482
Alignment:
Q  42 gtttatatttagggacaaaaataaaatcaaattggtgcttacatatagggac 93  Q
    |||||||||||  ||||||||||||||||||||| |||||| ||||| ||||    
T  42983533 gtttatatttaaagacaaaaataaaatcaaattgatgcttagatatatggac 42983482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 36 - 78
Target Start/End: Original strand, 20123625 - 20123667
Alignment:
Q  36 aaagaggtttatatttagggacaaaaataaaatcaaattggtg 78  Q
    |||| |||||| |||||||||||||||||||||||||| ||||    
T  20123625 aaaggggtttacatttagggacaaaaataaaatcaaatgggtg 20123667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 93
Target Start/End: Complemental strand, 14801862 - 14801798
Alignment:
Q  28 taatttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtgcttacatatagggac 93  Q
    ||||||||||| ||||||| ||||| |||||||||||||||||||  |||| ||| ||||| ||||    
T  14801862 taatttaaaaa-aggtttacatttaaggacaaaaataaaatcaaacgggtgtttaaatatatggac 14801798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 93
Target Start/End: Complemental strand, 15248854 - 15248790
Alignment:
Q  28 taatttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtgcttacatatagggac 93  Q
    ||||||||||| ||||||| ||||| |||||||||||||||||||  |||| ||| ||||| ||||    
T  15248854 taatttaaaaa-aggtttacatttaaggacaaaaataaaatcaaacgggtgtttaaatatatggac 15248790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 93
Target Start/End: Original strand, 29983468 - 29983532
Alignment:
Q  28 taatttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtgcttacatatagggac 93  Q
    ||||||||||| || |||| ||||| |||||||||||||||||||| |||| ||| ||||| ||||    
T  29983468 taatttaaaaa-agatttacatttaaggacaaaaataaaatcaaatgggtgtttaaatatatggac 29983532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 73
Target Start/End: Original strand, 36858366 - 36858410
Alignment:
Q  28 taatttaaaaagaggtttatatttagggacaaaaataaaatcaaat 73  Q
    ||||||||||| ||||||| ||||| ||||||||||||||||||||    
T  36858366 taatttaaaaa-aggtttacatttaaggacaaaaataaaatcaaat 36858410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 91
Target Start/End: Complemental strand, 21800998 - 21800927
Alignment:
Q  19 tgcatctaataatttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtgcttacatataggg 91  Q
    |||||||| ||||||| ||| || ||||||||||| |||||||||||||| ||||  ||||||  ||||||||    
T  21800998 tgcatctagtaatttagaaa-agatttatatttagagacaaaaataaaatgaaatgtgtgcttggatataggg 21800927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 20 - 68
Target Start/End: Original strand, 36116481 - 36116529
Alignment:
Q  20 gcatctaataatttaaaaagaggtttatatttagggacaaaaataaaat 68  Q
    ||||||| |||||||||||||| |||| | |||| ||||||||||||||    
T  36116481 gcatctagtaatttaaaaagagatttacaattagagacaaaaataaaat 36116529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 23 - 59
Target Start/End: Original strand, 37136349 - 37136385
Alignment:
Q  23 tctaataatttaaaaagaggtttatatttagggacaa 59  Q
    |||| |||||| |||||||||||||||||||||||||    
T  37136349 tctagtaatttgaaaagaggtttatatttagggacaa 37136385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 22 - 70
Target Start/End: Original strand, 40263878 - 40263926
Alignment:
Q  22 atctaataatttaaaaagaggtttatatttagggacaaaaataaaatca 70  Q
    |||||||||||||||||| | |||  ||||||||| |||||||||||||    
T  40263878 atctaataatttaaaaagtgatttgcatttagggataaaaataaaatca 40263926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 51; Significance: 4e-20; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 19 - 93
Target Start/End: Original strand, 19839094 - 19839168
Alignment:
Q  19 tgcatctaataatttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtgcttacatatagggac 93  Q
    |||||||| |||||| |||||  ||||| |||||||||||||||||||||||||| |||||||||||||||||||    
T  19839094 tgcatctagtaatttgaaaaggagtttacatttagggacaaaaataaaatcaaatgggtgcttacatatagggac 19839168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 19 - 93
Target Start/End: Original strand, 1763976 - 1764050
Alignment:
Q  19 tgcatctaataatttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtgcttacatatagggac 93  Q
    |||||||||||||||  ||||  |||||||||||| |||||||||||||||||||  ||||||| ||||||||||    
T  1763976 tgcatctaataatttggaaaggtgtttatatttagagacaaaaataaaatcaaatgagtgcttagatatagggac 1764050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 19 - 97
Target Start/End: Original strand, 6791539 - 6791617
Alignment:
Q  19 tgcatctaataatttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtgcttacatatagggacagaa 97  Q
    |||||||| ||| || ||||| |||||| |||||  ||||||||||||||||||| |||||||| ||||||||||||||    
T  6791539 tgcatctagtaagttgaaaaggggtttacatttaaagacaaaaataaaatcaaatgggtgcttagatatagggacagaa 6791617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 22 - 90
Target Start/End: Original strand, 30249027 - 30249095
Alignment:
Q  22 atctaataatttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtgcttacatatagg 90  Q
    ||||| |||||| |||| ||||||| ||||||||||||||||||| |||||| |||||||| |||||||    
T  30249027 atctagtaatttgaaaataggtttacatttagggacaaaaataaagtcaaatgggtgcttagatatagg 30249095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 19 - 93
Target Start/End: Complemental strand, 31945855 - 31945781
Alignment:
Q  19 tgcatctaataatttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtgcttacatatagggac 93  Q
    |||||||| |||||| |||||| ||||| |||||| |||||||||||||||||||  ||| ||||||||| ||||    
T  31945855 tgcatctagtaatttgaaaagaagtttacatttagagacaaaaataaaatcaaatgagtggttacatataaggac 31945781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 93
Target Start/End: Original strand, 11303021 - 11303094
Alignment:
Q  20 gcatctaataatttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtgcttacatatagggac 93  Q
    ||||||| | |||| |||||| ||||| ||||| |||||||||||||||||||| ||| |||| ||||||||||    
T  11303021 gcatctagttatttgaaaagaagtttacatttaaggacaaaaataaaatcaaatgggttcttagatatagggac 11303094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 19 - 82
Target Start/End: Original strand, 15981957 - 15982020
Alignment:
Q  19 tgcatctaataatttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtgctta 82  Q
    |||||||| |||||| |||| ||||||| ||||||||||||||||||| | |||| ||||||||    
T  15981957 tgcatctagtaatttgaaaaaaggtttacatttagggacaaaaataaagttaaatgggtgctta 15982020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 20 - 73
Target Start/End: Complemental strand, 197391 - 197338
Alignment:
Q  20 gcatctaataatttaaaaagaggtttatatttagggacaaaaataaaatcaaat 73  Q
    ||||||| ||||||||||||| ||||| ||||| ||||||||||||| ||||||    
T  197391 gcatctagtaatttaaaaagaagtttacatttaaggacaaaaataaagtcaaat 197338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 19 - 52
Target Start/End: Original strand, 6419212 - 6419245
Alignment:
Q  19 tgcatctaataatttaaaaagaggtttatattta 52  Q
    ||||||||||||||||||||||||||||||||||    
T  6419212 tgcatctaataatttaaaaagaggtttatattta 6419245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 195 - 256
Target Start/End: Complemental strand, 8353788 - 8353727
Alignment:
Q  195 aacactatcttcaattccacttgctcttgtgtgtgtaaaagttttctacatagaaagcttag 256  Q
    |||||| ||||||| |||||||||||||||  | | |||||||| |||||||||||||||||    
T  8353788 aacactttcttcaaatccacttgctcttgttggagcaaaagtttcctacatagaaagcttag 8353727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 28 - 93
Target Start/End: Complemental strand, 24068067 - 24068003
Alignment:
Q  28 taatttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtgcttacatatagggac 93  Q
    ||||||||||| ||||||| ||||| |||||||||||||||||||| |||| ||| ||||| ||||    
T  24068067 taatttaaaaa-aggtttacatttaaggacaaaaataaaatcaaatgggtgtttaaatatatggac 24068003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 19 - 78
Target Start/End: Original strand, 16186733 - 16186792
Alignment:
Q  19 tgcatctaataatttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtg 78  Q
    |||||||| |||||| ||||  |||||||||||| |||||||| ||||||||||| ||||    
T  16186733 tgcatctagtaatttgaaaaagggtttatatttaaggacaaaagtaaaatcaaatgggtg 16186792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 19 - 66
Target Start/End: Original strand, 16327287 - 16327334
Alignment:
Q  19 tgcatctaataatttaaaaagaggtttatatttagggacaaaaataaa 66  Q
    |||||||| |||||| ||||| ||||||||||||| ||||||||||||    
T  16327287 tgcatctagtaatttgaaaaggggtttatatttagagacaaaaataaa 16327334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 19 - 66
Target Start/End: Original strand, 16350685 - 16350732
Alignment:
Q  19 tgcatctaataatttaaaaagaggtttatatttagggacaaaaataaa 66  Q
    |||||||| |||||| ||||| ||||||||||||| ||||||||||||    
T  16350685 tgcatctagtaatttgaaaaggggtttatatttagagacaaaaataaa 16350732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 85
Target Start/End: Original strand, 31536176 - 31536242
Alignment:
Q  19 tgcatctaataatttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtgcttacat 85  Q
    |||| ||| |||||| ||||| |||||| ||| || |||||| |||||||||||| |||||||||||    
T  31536176 tgcaactagtaatttgaaaaggggtttacattcagtgacaaatataaaatcaaatgggtgcttacat 31536242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 88
Target Start/End: Original strand, 3729584 - 3729653
Alignment:
Q  19 tgcatctaataatttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtgcttacatata 88  Q
    |||||||||||||||||||||| | ||| || ||  || |||||||||||||||| |||| | |||||||    
T  3729584 tgcatctaataatttaaaaagaagattacatataaagataaaaataaaatcaaatgggtgatcacatata 3729653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 93
Target Start/End: Original strand, 30269816 - 30269880
Alignment:
Q  28 taatttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtgcttacatatagggac 93  Q
    ||||||||||| ||||||| |||||   ||||||||||||||||||||||| ||| ||||| ||||    
T  30269816 taatttaaaaa-aggtttacatttaaaaacaaaaataaaatcaaattggtgtttaaatatatggac 30269880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 92
Target Start/End: Complemental strand, 30465911 - 30465838
Alignment:
Q  19 tgcatctaataatttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtgcttacatataggga 92  Q
    |||||||| |||||| |||||| ||||| ||||| | ||||||||||| |||||| | || ||| |||||||||    
T  30465911 tgcatctagtaatttgaaaagaagtttacatttatgaacaaaaataaagtcaaatagatgtttagatataggga 30465838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 20 - 60
Target Start/End: Complemental strand, 12802842 - 12802802
Alignment:
Q  20 gcatctaataatttaaaaagaggtttatatttagggacaaa 60  Q
    ||||||| |||||| ||||||||||||||||||| ||||||    
T  12802842 gcatctagtaatttgaaaagaggtttatatttagagacaaa 12802802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 51; Significance: 4e-20; HSPs: 31)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 19 - 93
Target Start/End: Complemental strand, 39690427 - 39690353
Alignment:
Q  19 tgcatctaataatttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtgcttacatatagggac 93  Q
    |||||||| |||||| |||||  ||||| |||||||||||||||||||||||||| |||||||||||||||||||    
T  39690427 tgcatctagtaatttgaaaaggagtttacatttagggacaaaaataaaatcaaatgggtgcttacatatagggac 39690353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 19 - 93
Target Start/End: Complemental strand, 25690594 - 25690520
Alignment:
Q  19 tgcatctaataatttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtgcttacatatagggac 93  Q
    |||||||| ||| || ||||| |||||| |||||||||||||||||||||||||| |||||||| ||||||||||    
T  25690594 tgcatctagtaagttgaaaaggggtttacatttagggacaaaaataaaatcaaatgggtgcttagatatagggac 25690520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 19 - 93
Target Start/End: Original strand, 27642665 - 27642739
Alignment:
Q  19 tgcatctaataatttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtgcttacatatagggac 93  Q
    |||||||| |||||| |||||  ||||||||||| ||||||||||||||||||||  ||||||||||||||||||    
T  27642665 tgcatctagtaatttgaaaaggagtttatatttatggacaaaaataaaatcaaatgagtgcttacatatagggac 27642739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 19 - 92
Target Start/End: Complemental strand, 3558968 - 3558895
Alignment:
Q  19 tgcatctaataatttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtgcttacatataggga 92  Q
    |||||||| |||||| |||||||| ||||||||||||||||||||||||| |||| ||||| || |||||||||    
T  3558968 tgcatctagtaatttgaaaagagggttatatttagggacaaaaataaaataaaataggtgcctagatataggga 3558895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 19 - 93
Target Start/End: Complemental strand, 36750717 - 36750643
Alignment:
Q  19 tgcatctaataatttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtgcttacatatagggac 93  Q
    |||||||| |||||| |||||  |||||||||||||||||||||||||||||||| | ||| || ||||||||||    
T  36750717 tgcatctagtaatttgaaaaggcgtttatatttagggacaaaaataaaatcaaatggatgcctaaatatagggac 36750643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 9946298 - 9946244
Alignment:
Q  19 tgcatctaataatttaaaaagaggtttatatttagggacaaaaataaaatcaaat 73  Q
    ||||||||||||||| |||||||  ||| ||||||||||||||||||||||||||    
T  9946298 tgcatctaataatttgaaaagagaattacatttagggacaaaaataaaatcaaat 9946244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 19 - 89
Target Start/End: Original strand, 21912283 - 21912353
Alignment:
Q  19 tgcatctaataatttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtgcttacatatag 89  Q
    |||||||  |||||| |||||  ||||| |||||||||||||||||||||||||| |||||||| ||||||    
T  21912283 tgcatcttgtaatttgaaaaggagtttacatttagggacaaaaataaaatcaaatgggtgcttatatatag 21912353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 21 - 93
Target Start/End: Complemental strand, 12895118 - 12895047
Alignment:
Q  21 catctaataatttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtgcttacatatagggac 93  Q
    |||||||||| || |||||||||||| ||||| ||||||||||||||| ||| || |||||| ||||||||||    
T  12895118 catctaataagttgaaaagaggtttacatttaaggacaaaaataaaattaaa-tgatgcttagatatagggac 12895047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 19 - 93
Target Start/End: Complemental strand, 15898403 - 15898329
Alignment:
Q  19 tgcatctaataattt-aaaaagaggtttatatttagggacaaaaataaaatcaaattggtgcttacatatagggac 93  Q
    |||||||| |||||| |||||||| |||||||||||||||||||||||| |||||  | |||||| ||||||||||    
T  15898403 tgcatctagtaatttgaaaaagag-tttatatttagggacaaaaataaagtcaaacggatgcttagatatagggac 15898329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 93
Target Start/End: Original strand, 27925436 - 27925510
Alignment:
Q  19 tgcatctaataatttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtgcttacatatagggac 93  Q
    |||||||| |||||| ||||| | |||| ||||||||||||||||||| |||||| || ||||| ||| ||||||    
T  27925436 tgcatctagtaatttgaaaagggatttacatttagggacaaaaataaagtcaaatgggggcttagatacagggac 27925510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 93
Target Start/End: Complemental strand, 35568946 - 35568872
Alignment:
Q  19 tgcatctaataatttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtgcttacatatagggac 93  Q
    ||||| || |||||| ||||| |||||| | ||||||||||||||||||| |||| | |||||| ||||||||||    
T  35568946 tgcatttagtaatttgaaaaggggtttacaattagggacaaaaataaaattaaatggatgcttagatatagggac 35568872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 36347542 - 36347488
Alignment:
Q  19 tgcatctaataatttaaaaagaggtttatatttagggacaaaaataaaatcaaat 73  Q
    ||||||||||||||| ||||||  |||| ||||| ||||||||||||||||||||    
T  36347542 tgcatctaataatttgaaaagaaatttacatttatggacaaaaataaaatcaaat 36347488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 28 - 93
Target Start/End: Complemental strand, 8760974 - 8760910
Alignment:
Q  28 taatttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtgcttacatatagggac 93  Q
    ||||||||||| ||||||| ||||| |||||||||||||||||||| |||| ||| ||||| ||||    
T  8760974 taatttaaaaa-aggtttacatttaaggacaaaaataaaatcaaatgggtgtttaaatatatggac 8760910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 90
Target Start/End: Complemental strand, 3247213 - 3247141
Alignment:
Q  19 tgcatctaataatttaaaaagaggtttatatttagggacaaaaataaaatc-aaattggtgcttacatatagg 90  Q
    ||||| ||||||||| ||||| | ||||||||| |||| |||||||||||| |||| |||||||| |||||||    
T  3247213 tgcatataataatttgaaaagggatttatatttggggataaaaataaaatcaaaatgggtgcttatatatagg 3247141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 90
Target Start/End: Complemental strand, 10523212 - 10523143
Alignment:
Q  19 tgcatctaataatttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtgcttacatatagg 90  Q
    ||||||||||||||| ||||   ||||| ||||| ||||||||||||| |||||| |||||||| |||||||    
T  10523212 tgcatctaataatttgaaaaa--gtttacatttatggacaaaaataaagtcaaatgggtgcttagatatagg 10523143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 93
Target Start/End: Complemental strand, 31641129 - 31641057
Alignment:
Q  21 catctaataatttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtgcttacatatagggac 93  Q
    |||||| |||||| ||||||| |||| ||||||||||||||||||| |||||   ||| ||||||||| ||||    
T  31641129 catctagtaatttgaaaagagatttaaatttagggacaaaaataaagtcaaacgagtgtttacatataaggac 31641057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 19 - 93
Target Start/End: Original strand, 4738792 - 4738866
Alignment:
Q  19 tgcatctaataatttaaaaagag-gtttatatttagggacaaaaataaaatcaaattggtgcttacatatagggac 93  Q
    |||||||| |||||||||| ||| ||||| ||||||||||||||||||| ||| || || ||||| ||||||||||    
T  4738792 tgcatctagtaatttaaaa-gagagtttacatttagggacaaaaataaactcagatgggggcttagatatagggac 4738866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 22 - 93
Target Start/End: Original strand, 7510705 - 7510776
Alignment:
Q  22 atctaataatttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtgcttacatatagggac 93  Q
    ||||| |||||| |||||  ||||| |||||||||||| |||||| ||||||  ||| ||||||||||||||    
T  7510705 atctagtaatttgaaaaggcgtttacatttagggacaataataaagtcaaatgagtgtttacatatagggac 7510776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 19 - 82
Target Start/End: Original strand, 18729756 - 18729818
Alignment:
Q  19 tgcatctaataatttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtgctta 82  Q
    ||||||||||||||| ||||| |||||| |||||||||  ||||||||||||||| | ||||||    
T  18729756 tgcatctaataatttgaaaaggggtttagatttaggga-taaaataaaatcaaatggatgctta 18729818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 129768 - 129822
Alignment:
Q  19 tgcatctaataatttaaaaagaggtttatatttagggacaaaaataaaatcaaat 73  Q
    |||||||| |||||||||||  ||||||||| ||| |||||||||||| ||||||    
T  129768 tgcatctagtaatttaaaaaatggtttatatgtagagacaaaaataaagtcaaat 129822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 5151142 - 5151088
Alignment:
Q  19 tgcatctaataatttaaaaagaggtttatatttagggacaaaaataaaatcaaat 73  Q
    |||||||| |||||| ||| |  ||||| ||||||||||||||||||||||||||    
T  5151142 tgcatctagtaatttcaaagggagtttacatttagggacaaaaataaaatcaaat 5151088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 28 - 90
Target Start/End: Original strand, 18032767 - 18032829
Alignment:
Q  28 taatttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtgcttacatatagg 90  Q
    |||||| ||||| | |||| ||||| |||||||||||||||||||  |||| |||||||||||    
T  18032767 taatttgaaaagggctttacatttaaggacaaaaataaaatcaaaagggtggttacatatagg 18032829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 34877829 - 34877883
Alignment:
Q  19 tgcatctaataatttaaaaagaggtttatatttagggacaaaaataaaatcaaat 73  Q
    ||||| ||||||||||||| | | |||| ||||| ||||||||||||||||||||    
T  34877829 tgcatataataatttaaaaggggatttacatttatggacaaaaataaaatcaaat 34877883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 93
Target Start/End: Original strand, 36177480 - 36177530
Alignment:
Q  43 tttatatttagggacaaaaataaaatcaaattggtgcttacatatagggac 93  Q
    |||| |||||||||||||||||||||||||| | |||||| ||||| ||||    
T  36177480 tttacatttagggacaaaaataaaatcaaatggatgcttagatatatggac 36177530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 88
Target Start/End: Complemental strand, 43060141 - 43060087
Alignment:
Q  34 aaaaagaggtttatatttagggacaaaaataaaatcaaattggtgcttacatata 88  Q
    |||| ||| |||| |||||||||||||||||||||||||| | |||||| |||||    
T  43060141 aaaaggagttttacatttagggacaaaaataaaatcaaatggatgcttagatata 43060087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 73
Target Start/End: Complemental strand, 6514351 - 6514307
Alignment:
Q  28 taatttaaaaagaggtttatatttagggacaaaaataaaatcaaat 73  Q
    ||||||||||| ||||||| ||||| ||||||||||||||||||||    
T  6514351 taatttaaaaa-aggtttacatttaaggacaaaaataaaatcaaat 6514307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 93
Target Start/End: Original strand, 35758258 - 35758322
Alignment:
Q  28 taatttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtgcttacatatagggac 93  Q
    ||||||||||| | ||||| ||||| |||||||||||||||||||| |||| ||| ||||| ||||    
T  35758258 taatttaaaaa-atgtttacatttaaggacaaaaataaaatcaaataggtgtttaaatatatggac 35758322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 93
Target Start/End: Complemental strand, 36745737 - 36745673
Alignment:
Q  28 taatttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtgcttacatatagggac 93  Q
    ||||||||||| || |||| ||||| |||||||||||||||||||| |||| ||| ||||| ||||    
T  36745737 taatttaaaaaaag-tttacatttaaggacaaaaataaaatcaaatgggtgtttaaatatatggac 36745673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 93
Target Start/End: Original strand, 38040856 - 38040920
Alignment:
Q  28 taatttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtgcttacatatagggac 93  Q
    ||||||||||| || |||| ||||| |||||||||||||||||||| |||| ||| ||||| ||||    
T  38040856 taatttaaaaaaag-tttacatttaaggacaaaaataaaatcaaatgggtgtttaaatatatggac 38040920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 93
Target Start/End: Original strand, 40144137 - 40144201
Alignment:
Q  28 taatttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtgcttacatatagggac 93  Q
    ||||||||||| || |||| ||||| |||||||||||||||||||| |||| ||| ||||| ||||    
T  40144137 taatttaaaaaaag-tttacatttaaggacaaaaataaaatcaaatgggtgtttaaatatatggac 40144201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 25 - 93
Target Start/End: Complemental strand, 25017606 - 25017538
Alignment:
Q  25 taataatttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtgcttacatatagggac 93  Q
    ||||||||| ||| | |||||| ||||| ||||||||||||| ||||||   |||||| ||||||||||    
T  25017606 taataatttgaaagggggtttacatttaaggacaaaaataaagtcaaatgaatgcttagatatagggac 25017538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 50; Significance: 1e-19; HSPs: 45)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 19 - 96
Target Start/End: Complemental strand, 57131 - 57054
Alignment:
Q  19 tgcatctaataatttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtgcttacatatagggacaga 96  Q
    |||||||| |||||| ||||| |||||| ||||||||||||||||||||||||||  ||||||| |||||||||||||    
T  57131 tgcatctagtaatttgaaaaggggtttacatttagggacaaaaataaaatcaaatgagtgcttagatatagggacaga 57054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 21 - 94
Target Start/End: Original strand, 7772676 - 7772749
Alignment:
Q  21 catctaataatttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtgcttacatatagggaca 94  Q
    |||||| |||||| |||||| |||||||||||||||||||| ||||||||||| |||| |||||||||||||||    
T  7772676 catctagtaatttgaaaagatgtttatatttagggacaaaagtaaaatcaaatgggtgtttacatatagggaca 7772749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 19 - 89
Target Start/End: Complemental strand, 38773291 - 38773221
Alignment:
Q  19 tgcatctaataatttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtgcttacatatag 89  Q
    ||||||||||||||| |||||||||||| ||||||||| ||||||||||||||||  ||||||| ||||||    
T  38773291 tgcatctaataatttgaaaagaggtttaaatttagggataaaaataaaatcaaatgagtgcttagatatag 38773221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 19 - 93
Target Start/End: Complemental strand, 43980526 - 43980452
Alignment:
Q  19 tgcatctaataatttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtgcttacatatagggac 93  Q
    |||||||| |||||| |||||  ||||| ||||| |||||||||||||||||||| |||||||||||||||||||    
T  43980526 tgcatctagtaatttgaaaaggagtttacatttaaggacaaaaataaaatcaaatgggtgcttacatatagggac 43980452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 21 - 93
Target Start/End: Complemental strand, 26878669 - 26878597
Alignment:
Q  21 catctaataatttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtgcttacatatagggac 93  Q
    |||||| ||||||||||| | ||||| |||||||||||||||||||||||||| |||  ||||||||||||||    
T  26878669 catctagtaatttaaaaaaaagtttacatttagggacaaaaataaaatcaaatgggttgttacatatagggac 26878597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 19 - 93
Target Start/End: Complemental strand, 1177098 - 1177024
Alignment:
Q  19 tgcatctaataatttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtgcttacatatagggac 93  Q
    |||||||| |||||||||||| ||||||||||||| ||||||| |||||| ||||  ||| ||||||||||||||    
T  1177098 tgcatctagtaatttaaaaaggggtttatatttagagacaaaagtaaaattaaatgagtgtttacatatagggac 1177024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 19 - 93
Target Start/End: Complemental strand, 10396173 - 10396099
Alignment:
Q  19 tgcatctaataatttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtgcttacatatagggac 93  Q
    |||||||| |||||| ||||| |||||||||| ||||||||||| |||||||||  |||||||| ||||||||||    
T  10396173 tgcatctagtaatttgaaaaggggtttatattaagggacaaaaacaaaatcaaacgggtgcttagatatagggac 10396099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 19 - 93
Target Start/End: Original strand, 25198452 - 25198525
Alignment:
Q  19 tgcatctaataatttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtgcttacatatagggac 93  Q
    |||||||| |||||| ||||||| |||| ||||||||||||||||||| |||||| |||||||| ||||||||||    
T  25198452 tgcatctagtaatttgaaaagag-tttacatttagggacaaaaataaagtcaaataggtgcttagatatagggac 25198525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 19 - 93
Target Start/End: Complemental strand, 31252598 - 31252524
Alignment:
Q  19 tgcatctaataatttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtgcttacatatagggac 93  Q
    |||||||| |||||| |||||||||||| ||||||| |||||||||||||||||| | |||||| ||||| ||||    
T  31252598 tgcatctagtaatttgaaaagaggtttacatttaggaacaaaaataaaatcaaatggatgcttagatataaggac 31252524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 19 - 93
Target Start/End: Original strand, 37956277 - 37956351
Alignment:
Q  19 tgcatctaataatttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtgcttacatatagggac 93  Q
    ||||| || |||||||||||| |||||| |||||||||||||||||||||||||| | | |||| ||||||||||    
T  37956277 tgcatttagtaatttaaaaaggggtttacatttagggacaaaaataaaatcaaatagatacttagatatagggac 37956351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 19 - 92
Target Start/End: Complemental strand, 38202935 - 38202862
Alignment:
Q  19 tgcatctaataatttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtgcttacatataggga 92  Q
    |||||||| |||||| ||||| ||||||||| ||| ||||||||||||||||||| |||| ||| |||||||||    
T  38202935 tgcatctagtaatttgaaaaggggtttatatgtagagacaaaaataaaatcaaatgggtgtttagatataggga 38202862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 22 - 93
Target Start/End: Complemental strand, 31746346 - 31746275
Alignment:
Q  22 atctaataatttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtgcttacatatagggac 93  Q
    ||||| |||||| ||||| |||||| ||||||||||||||||||| |||||| ||||||||  |||||||||    
T  31746346 atctagtaatttgaaaaggggtttacatttagggacaaaaataaagtcaaatgggtgcttagttatagggac 31746275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 19 - 93
Target Start/End: Complemental strand, 24962308 - 24962234
Alignment:
Q  19 tgcatctaataatttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtgcttacatatagggac 93  Q
    |||||||| |||||| |||||  ||||| ||||| |||||||||||||||||||| | ||| |||||||||||||    
T  24962308 tgcatctagtaatttgaaaaggagtttacatttaaggacaaaaataaaatcaaatggatgcctacatatagggac 24962234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 19 - 93
Target Start/End: Complemental strand, 43191424 - 43191350
Alignment:
Q  19 tgcatctaataatttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtgcttacatatagggac 93  Q
    |||||||| |||||| |||||  ||||| |||||| ||||||||||||||||||| | |||||||||||| ||||    
T  43191424 tgcatctagtaatttgaaaaggagtttacatttagagacaaaaataaaatcaaatggatgcttacatataaggac 43191350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 28 - 93
Target Start/End: Original strand, 16357159 - 16357224
Alignment:
Q  28 taatttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtgcttacatatagggac 93  Q
    |||||| ||||| |||||| |||||||||||||||||||| ||||  |||| ||||||||||||||    
T  16357159 taatttgaaaaggggtttacatttagggacaaaaataaaaacaaaggggtggttacatatagggac 16357224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 19 - 91
Target Start/End: Original strand, 37141889 - 37141961
Alignment:
Q  19 tgcatctaataatttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtgcttacatataggg 91  Q
    |||||||| |||| | ||||  |||||| | |||||||||||||||||||||||| |||||||| ||||||||    
T  37141889 tgcatctagtaatgtgaaaaagggtttacaattagggacaaaaataaaatcaaatcggtgcttagatataggg 37141961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 21 - 88
Target Start/End: Original strand, 885625 - 885692
Alignment:
Q  21 catctaataatttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtgcttacatata 88  Q
    |||||| |||||| ||||| |||||| |||||||  ||||||||||||||||| |||||||| |||||    
T  885625 catctagtaatttgaaaaggggtttaaatttaggaccaaaaataaaatcaaatgggtgcttagatata 885692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 19 - 82
Target Start/End: Complemental strand, 5191492 - 5191429
Alignment:
Q  19 tgcatctaataatttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtgctta 82  Q
    |||||||| |||||| ||||| |||||| ||||||| ||||||||||||| |||| ||||||||    
T  5191492 tgcatctagtaatttgaaaaggggtttacatttaggaacaaaaataaaataaaataggtgctta 5191429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 19 - 94
Target Start/End: Complemental strand, 38761299 - 38761224
Alignment:
Q  19 tgcatctaataatttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtgcttacatatagggaca 94  Q
    |||||||| |||||| ||||| |||||| || |||||||||||||||||||||||   |||||| ||||| |||||    
T  38761299 tgcatctagtaatttgaaaaggggtttacatatagggacaaaaataaaatcaaatgaatgcttagatataaggaca 38761224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 22 - 93
Target Start/End: Original strand, 40517906 - 40517977
Alignment:
Q  22 atctaataatttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtgcttacatatagggac 93  Q
    |||||||||||| |||||  ||||| ||||||||||||||||||| |||||| | || ||| ||||||||||    
T  40517906 atctaataatttgaaaaggagtttacatttagggacaaaaataaagtcaaatggatgtttagatatagggac 40517977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 1769392 - 1769338
Alignment:
Q  19 tgcatctaataatttaaaaagaggtttatatttagggacaaaaataaaatcaaat 73  Q
    ||||||||||||||| ||| |||||||| ||||||  ||||||||||||||||||    
T  1769392 tgcatctaataatttgaaatgaggtttacatttagtaacaaaaataaaatcaaat 1769338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 93
Target Start/End: Complemental strand, 24512109 - 24512035
Alignment:
Q  19 tgcatctaataatttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtgcttacatatagggac 93  Q
    ||||||||| ||||| ||||  | |||| ||||||||||||||||||||||||||  ||||||| ||||| ||||    
T  24512109 tgcatctaagaatttgaaaaaggatttacatttagggacaaaaataaaatcaaatgagtgcttagatatatggac 24512035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 93
Target Start/End: Complemental strand, 39543603 - 39543529
Alignment:
Q  19 tgcatctaataatttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtgcttacatatagggac 93  Q
    |||||||| |||||| ||||  |||||| ||||||||||||||||||| |||||| ||  |||| ||||||||||    
T  39543603 tgcatctagtaatttgaaaaagggtttacatttagggacaaaaataaagtcaaatgggaacttagatatagggac 39543529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 40601983 - 40601929
Alignment:
Q  19 tgcatctaataatttaaaaagaggtttatatttagggacaaaaataaaatcaaat 73  Q
    |||||||| |||||| |||||||||||| ||||| ||||||||||||| ||||||    
T  40601983 tgcatctagtaatttgaaaagaggtttacatttaaggacaaaaataaagtcaaat 40601929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 93
Target Start/End: Complemental strand, 45183805 - 45183731
Alignment:
Q  19 tgcatctaataatttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtgcttacatatagggac 93  Q
    |||||||| ||||||||||||  ||||| |||||| ||||||||||||||||||   ||| ||| ||||||||||    
T  45183805 tgcatctagtaatttaaaaaggagtttacatttagagacaaaaataaaatcaaacgtgtgtttagatatagggac 45183731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 21 - 86
Target Start/End: Complemental strand, 3006065 - 3006000
Alignment:
Q  21 catctaataatttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtgcttacata 86  Q
    |||||| |||||| ||||||| |||| ||||||| ||||||||||| |||||| |||| |||||||    
T  3006065 catctagtaatttgaaaagagatttacatttaggaacaaaaataaagtcaaataggtgtttacata 3006000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 28 - 93
Target Start/End: Complemental strand, 5969873 - 5969809
Alignment:
Q  28 taatttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtgcttacatatagggac 93  Q
    ||||||||||| ||||||| ||||| |||||||||||||||||||| |||| ||| ||||| ||||    
T  5969873 taatttaaaaa-aggtttacatttaaggacaaaaataaaatcaaatgggtgtttaaatatatggac 5969809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 28 - 89
Target Start/End: Original strand, 23280820 - 23280881
Alignment:
Q  28 taatttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtgcttacatatag 89  Q
    |||||| |||| || |||| ||||||| ||||||||||||| ||||||||||||| ||||||    
T  23280820 taatttgaaaatagatttacatttaggaacaaaaataaaataaaattggtgcttatatatag 23280881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 28 - 93
Target Start/End: Complemental strand, 31008405 - 31008341
Alignment:
Q  28 taatttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtgcttacatatagggac 93  Q
    ||||||||||| ||||||| ||||| |||||||||||||||||||| |||| ||| ||||| ||||    
T  31008405 taatttaaaaa-aggtttacatttaaggacaaaaataaaatcaaatgggtgtttaaatatatggac 31008341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 28 - 93
Target Start/End: Complemental strand, 41726228 - 41726164
Alignment:
Q  28 taatttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtgcttacatatagggac 93  Q
    ||||||||||| ||||||| ||||| |||||||||||||||||||| |||| ||| ||||| ||||    
T  41726228 taatttaaaaa-aggtttacatttaaggacaaaaataaaatcaaatgggtgtttaaatatatggac 41726164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 48 - 96
Target Start/End: Original strand, 40790980 - 40791028
Alignment:
Q  48 atttagggacaaaaataaaatcaaattggtgcttacatatagggacaga 96  Q
    |||||||||||||||||||||||||| |||| ||| | |||||||||||    
T  40790980 atttagggacaaaaataaaatcaaatgggtgtttagacatagggacaga 40791028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 22 - 93
Target Start/End: Original strand, 2303258 - 2303329
Alignment:
Q  22 atctaataatttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtgcttacatatagggac 93  Q
    ||||| |||||| |||||  ||||| |||| |||||||||||||| |||||| | |||||| ||||||||||    
T  2303258 atctagtaatttgaaaaggagtttacatttcgggacaaaaataaattcaaatggttgcttagatatagggac 2303329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 22 - 93
Target Start/End: Original strand, 2327852 - 2327923
Alignment:
Q  22 atctaataatttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtgcttacatatagggac 93  Q
    ||||| |||||| |||||  ||||| |||| |||||||||||||| |||||| | |||||| ||||||||||    
T  2327852 atctagtaatttgaaaaggagtttacatttcgggacaaaaataaattcaaatggttgcttagatatagggac 2327923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 43 - 90
Target Start/End: Original strand, 34158103 - 34158150
Alignment:
Q  43 tttatatttagggacaaaaataaaatcaaattggtgcttacatatagg 90  Q
    |||| ||||||||||||||||||||||||||  ||||||| |||||||    
T  34158103 tttacatttagggacaaaaataaaatcaaatgagtgcttaaatatagg 34158150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 12763005 - 12763058
Alignment:
Q  19 tgcatctaataatttaaaaagaggtttatatttagggacaaaaataaaatcaaat 73  Q
    |||||||| ||||||  |||| |||||| ||||||||||||||||||||||||||    
T  12763005 tgcatctagtaatttggaaag-ggtttagatttagggacaaaaataaaatcaaat 12763058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 60
Target Start/End: Original strand, 22590541 - 22590579
Alignment:
Q  22 atctaataatttaaaaagaggtttatatttagggacaaa 60  Q
    ||||| |||||| ||||||||||||||||||||||||||    
T  22590541 atctagtaatttgaaaagaggtttatatttagggacaaa 22590579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 93
Target Start/End: Complemental strand, 40807954 - 40807880
Alignment:
Q  19 tgcatctaataatttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtgcttacatatagggac 93  Q
    ||||| || |||||| ||| |||||||| ||||| ||||||||||||| |||||| || | |||||| |||||||    
T  40807954 tgcatgtagtaatttgaaatgaggtttacatttaaggacaaaaataaagtcaaatgggggtttacatgtagggac 40807880  T

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Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 93
Target Start/End: Complemental strand, 19726583 - 19726519
Alignment:
Q  28 taatttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtgcttacatatagggac 93  Q
    ||||||||||| ||||||  ||||| |||||||||||||||||||| |||| ||| ||||| ||||    
T  19726583 taatttaaaaa-aggtttgcatttaaggacaaaaataaaatcaaatgggtgtttaaatatatggac 19726519  T

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Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 89
Target Start/End: Complemental strand, 23399701 - 23399652
Alignment:
Q  40 aggtttatatttagggacaaaaataaaatcaaattggtgcttacatatag 89  Q
    ||||||| ||||||| ||||||||||||| | ||||||||||| ||||||    
T  23399701 aggtttacatttaggaacaaaaataaaataatattggtgcttatatatag 23399652  T

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Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 96
Target Start/End: Original strand, 25185196 - 25185273
Alignment:
Q  19 tgcatctaataatttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtgcttacatatagggacaga 96  Q
    |||||||| |||||| |||||  ||||| ||||| ||||||||||| ||| ||||  ||||||| ||||| |||||||    
T  25185196 tgcatctagtaatttgaaaaggtgtttacatttatggacaaaaatagaattaaatgagtgcttagatataaggacaga 25185273  T

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Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 73
Target Start/End: Complemental strand, 27679144 - 27679100
Alignment:
Q  28 taatttaaaaagaggtttatatttagggacaaaaataaaatcaaat 73  Q
    ||||||||||| ||||||| ||||| ||||||||||||||||||||    
T  27679144 taatttaaaaa-aggtttacatttaaggacaaaaataaaatcaaat 27679100  T

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Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 60
Target Start/End: Complemental strand, 36309538 - 36309497
Alignment:
Q  19 tgcatctaataatttaaaaagaggtttatatttagggacaaa 60  Q
    ||||||||| ||||||||||||| ||||||||||| ||||||    
T  36309538 tgcatctaagaatttaaaaagagatttatatttagagacaaa 36309497  T

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Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 93
Target Start/End: Complemental strand, 38770121 - 38770056
Alignment:
Q  28 taatttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtgcttacatatagggac 93  Q
    |||||| ||||| ||||||||| | |  |||||||||||||||||| |||||||| ||||| ||||    
T  38770121 taatttgaaaaggggtttatatctggaaacaaaaataaaatcaaatgggtgcttagatataaggac 38770056  T

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Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 56 - 92
Target Start/End: Complemental strand, 14522262 - 14522226
Alignment:
Q  56 acaaaaataaaatcaaattggtgcttacatataggga 92  Q
    |||||||||||||||||| |||||||| |||||||||    
T  14522262 acaaaaataaaatcaaatgggtgcttagatataggga 14522226  T

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Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 45 - 73
Target Start/End: Original strand, 17933892 - 17933920
Alignment:
Q  45 tatatttagggacaaaaataaaatcaaat 73  Q
    |||||||||||||||||||||||||||||    
T  17933892 tatatttagggacaaaaataaaatcaaat 17933920  T

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Target: scaffold1091 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 1)
Name: scaffold1091
Description:

Target: scaffold1091; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 19 - 92
Target Start/End: Complemental strand, 1855 - 1782
Alignment:
Q  19 tgcatctaataatttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtgcttacatataggga 92  Q
    |||||||| |||||| ||||| |||||| ||| ||||||||||||||| |||||| |||||||| |||||||||    
T  1855 tgcatctagtaatttgaaaaggggtttacattgagggacaaaaataaagtcaaatgggtgcttagatataggga 1782  T

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Target: scaffold0176 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 30 - 93
Target Start/End: Original strand, 20180 - 20243
Alignment:
Q  30 atttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtgcttacatatagggac 93  Q
    |||||||||||| |||| |||||||  ||||||||||||||||| | |||||||||||| ||||    
T  20180 atttaaaaagagatttacatttaggatcaaaaataaaatcaaatggatgcttacatataaggac 20243  T

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Target: scaffold0121 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 93
Target Start/End: Original strand, 24222 - 24296
Alignment:
Q  19 tgcatctaataatttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtgcttacatatagggac 93  Q
    |||||||| |||||| |||  || |||| |||||||||||||||||||||||||| || | ||| ||||||||||    
T  24222 tgcatctagtaatttgaaagaagatttacatttagggacaaaaataaaatcaaataggagtttagatatagggac 24296  T

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Target: scaffold0070 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 28 - 93
Target Start/End: Original strand, 12954 - 13018
Alignment:
Q  28 taatttaaaaagaggtttatatttagggacaaaaataaaatcaaattggtgcttacatatagggac 93  Q
    ||||||||||| ||||||| ||||| |||||||||||||||||||| |||| ||| ||||| ||||    
T  12954 taatttaaaaa-aggtttacatttaaggacaaaaataaaatcaaatgggtgtttaaatatatggac 13018  T

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Target: scaffold0036 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 35 - 90
Target Start/End: Original strand, 54979 - 55034
Alignment:
Q  35 aaaagaggtttatatttagggacaaaaataaaatcaaattggtgcttacatatagg 90  Q
    ||||| |||||| |||||| || |||||||||||||||| |||||||| |||||||    
T  54979 aaaaggggtttacatttagagataaaaataaaatcaaataggtgcttaaatatagg 55034  T

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