View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20439_high_3 (Length: 230)
Name: NF20439_high_3
Description: NF20439
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20439_high_3 |
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Alignment Details
Target: chr7 (Bit Score: 205; Significance: 1e-112; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 7187593 - 7187377
Alignment:
| Q |
1 |
atatttttattttacttgagagattcattcataaccaagtgtatcttgaaaagtggaaagtggaaatgcaacagggccatgtcgtagcctgattaaggta |
100 |
Q |
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| T |
7187593 |
atatttttattttacttgagagattcattcttaaccaagtgtatcttgaaaagtggaaagtggaaatgcaacagggccatgtcgtagcctgattaaggta |
7187494 |
T |
|
| Q |
101 |
tactaacgttgtggcattactcaatcaatagagggtccacaatgtgttgcatcacttgctaattaggaatttgccatacatatggtgttccaaatttagt |
200 |
Q |
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| T |
7187493 |
tagtaacgttgtggcattactcaatcaatagagggtccacaatgtgttgcatcaattgctaattaggaatttgccatacatatggtgttccaaatttagt |
7187394 |
T |
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| Q |
201 |
agtcagtactttataat |
217 |
Q |
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||||||||||||||||| |
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| T |
7187393 |
agtcagtactttataat |
7187377 |
T |
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