View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20442_low_9 (Length: 274)
Name: NF20442_low_9
Description: NF20442
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20442_low_9 |
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Alignment Details
Target: chr3 (Bit Score: 241; Significance: 1e-133; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 8 - 256
Target Start/End: Original strand, 2564008 - 2564256
Alignment:
| Q |
8 |
agattattctcggtatctgcatagcgcgtaacaatcatacatatctagtgtgtatatactctatatttgcactgcaagaggtgatagattttctctctaa |
107 |
Q |
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| T |
2564008 |
agattattctctgtatctgcatagcgcgtaagaatcatacatatctagtgtgtatatactctatatttgcactgcaagaggtgatagattttctctctaa |
2564107 |
T |
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| Q |
108 |
ttctaaagacacttgacgagctttggtttgaaaaatgaacaaattgtgggcaacacatgtatacctacctagtggttagttgcccagtcgagaaagatat |
207 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2564108 |
ttctaaagacacttgacgagctttggtttgaaaaatgaacaaattgtgggcaacacatgtatacctacctagtggttagttgcccagtcgagaaagatat |
2564207 |
T |
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| Q |
208 |
atcttttcttgggaccacgggcaatgatttgtgaggctagtgcacaatg |
256 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2564208 |
atcttttcttgggaccacgggcaatgatttgtgaggctagtgcacaatg |
2564256 |
T |
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