View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20446_low_17 (Length: 309)
Name: NF20446_low_17
Description: NF20446
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20446_low_17 |
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Alignment Details
Target: chr7 (Bit Score: 285; Significance: 1e-160; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 285; E-Value: 1e-160
Query Start/End: Original strand, 4 - 304
Target Start/End: Complemental strand, 47591031 - 47590731
Alignment:
| Q |
4 |
attttcgtgaactcgactcagctgattccaacttggacaccaccaaaaatgacaattgttacaaccctctaagcaatgttttttcaccattcttaccaat |
103 |
Q |
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| T |
47591031 |
attttcgtgaactcgactcagttgattcgaacttagacaccaccaaaaatgacaattgttacaaccctctaagcaatgttttttcaccattcttaccaat |
47590932 |
T |
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| Q |
104 |
cattcaaaattagtggtattaattatcagaacaattaataaaataaaattgaaagttactgttgtctttatggagagactttctggatacgcgacattta |
203 |
Q |
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| T |
47590931 |
cattcaaaattagtggtattaattatcagaacaattaataaaataaaattgaaagttactgttgtctttatggagagactttctggatacgcgacattta |
47590832 |
T |
|
| Q |
204 |
agtttaatgacttgttaaaactgttttggttttaaccacttgctttgcaacttcatgacatatacacgcgttcaatatgctcctacatctatccacctat |
303 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
47590831 |
agtttaatgacttgttaaaactgttttggttttaaccacttgctttgcaacttcatgacatatacacgcgttcaatatgctcctacatctatccatctat |
47590732 |
T |
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| Q |
304 |
g |
304 |
Q |
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| T |
47590731 |
g |
47590731 |
T |
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