View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20447_low_3 (Length: 251)
Name: NF20447_low_3
Description: NF20447
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20447_low_3 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 225; Significance: 1e-124; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 19 - 251
Target Start/End: Original strand, 33814050 - 33814282
Alignment:
| Q |
19 |
agtggtgcaagcaaaaccatattttacccaaagaaagaacaaccgatagttgaagggaaaacaagactacatatgtatcagttggttttagttaaaatta |
118 |
Q |
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| T |
33814050 |
agtggtgcaagcaaaaccatattttacccaaacaaagaacaaccgatagttgcagggaaaacaagactacatatgtatcagttggttttagttaaaatta |
33814149 |
T |
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| Q |
119 |
agtttgaaaaaagtgatgcaccatcctcaaaagaagacgcaagctcaaccgaagaatactaaatatgcatcattattattgaatcattaaaagagaaagt |
218 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33814150 |
agtttgaaaaaagtgatgcaccatcctcaaaagaagacgcaagctcaaccgaagaatactaaatatgcatcattattattgaatcattaaaagagaaagt |
33814249 |
T |
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| Q |
219 |
tacaaaggagaaaattggaatgctactcttgtc |
251 |
Q |
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||||||||||||||||||||||||||||||||| |
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| T |
33814250 |
tacaaaggagaaaattggaatgctactcttgtc |
33814282 |
T |
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