View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20448_low_12 (Length: 290)
Name: NF20448_low_12
Description: NF20448
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20448_low_12 |
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Alignment Details
Target: chr8 (Bit Score: 134; Significance: 9e-70; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 134; E-Value: 9e-70
Query Start/End: Original strand, 37 - 191
Target Start/End: Original strand, 29925023 - 29925179
Alignment:
| Q |
37 |
acaaaagaaatatatatcgataagttgagatgatttgcatatataagaagttaaatatgatattatccaataaattgttatataattatccat--aaaaa |
134 |
Q |
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| T |
29925023 |
acaaaagaaatatatatcgataagttgatatgatttgcatatgtaagaagttaaatatgatattatccaataaattgttatataattatccataaaaaaa |
29925122 |
T |
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| Q |
135 |
agtgcttgtgtaacaaaatagtttatgcaagtatattaatttatttatgaaaacgac |
191 |
Q |
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| T |
29925123 |
agtgcttgtgtaacaaaatagtttatgcaagtatattaatttatttaagaaaacgac |
29925179 |
T |
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