View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20448_low_17 (Length: 263)
Name: NF20448_low_17
Description: NF20448
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20448_low_17 |
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Alignment Details
Target: chr7 (Bit Score: 163; Significance: 4e-87; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 1 - 247
Target Start/End: Original strand, 34329874 - 34330117
Alignment:
| Q |
1 |
ttaacactggaaatgtgaatccatcggtgtaaggcactcttacagttgttgttaccactggttgaaacctttgagatttcgttacaacatgattctgtgt |
100 |
Q |
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| T |
34329874 |
ttaacactggaaatgtgaatccatcggtgtaaggcactcttacagttgttgttaccactggttgaaacctttgagatttcgttacaacatgattctgtgt |
34329973 |
T |
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| Q |
101 |
ttgatcaatgttatttttaatccaattgttgttcatnnnnnnnnnnnnnnnnnaaattggtgaaggaattttgatattgtttttgggtaattctgttaan |
200 |
Q |
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| T |
34329974 |
ttgatcaatgttattgttaatccaattgttgttcat---tggtggtggtggtgaaattggtgaaggaattttgatattgtttttgggtaattctgttaat |
34330070 |
T |
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| Q |
201 |
nnnnnnncattgacttgaactgattttttacctgtgcagggacattt |
247 |
Q |
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| T |
34330071 |
tttttttcattgacttgaactgattttttacctgtgcagggacattt |
34330117 |
T |
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