View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20451_high_7 (Length: 203)
Name: NF20451_high_7
Description: NF20451
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20451_high_7 |
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Alignment Details
Target: chr4 (Bit Score: 172; Significance: 1e-92; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 172; E-Value: 1e-92
Query Start/End: Original strand, 1 - 188
Target Start/End: Complemental strand, 34030009 - 34029822
Alignment:
| Q |
1 |
tagtattttataacatttttaatatttaattttaaagaaaagttagactgacaatgagagttgggtgttacaacaataagttatgtcacttccacataaa |
100 |
Q |
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| T |
34030009 |
tagtattttatgacatttttaatatttaattttaaagaaaagttagactgacaatgagagttgggtgttacaacaataaatgatgtcacttccacataaa |
34029910 |
T |
|
| Q |
101 |
tttggagaaaaattgaaagagatctactaaatcacgacaaagaaaaaacatgaggatcaaaatcgctaaaaatgttggatgccaaaac |
188 |
Q |
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| T |
34029909 |
tttggagaaaaattgaaagaggtctactaaatcacgacaaagaaaaaacatgaggatcaaaatcgctaaaaatgttggatgccaaaac |
34029822 |
T |
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