View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20453_low_11 (Length: 203)
Name: NF20453_low_11
Description: NF20453
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20453_low_11 |
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Alignment Details
Target: chr7 (Bit Score: 86; Significance: 3e-41; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 13 - 106
Target Start/End: Complemental strand, 44953472 - 44953379
Alignment:
| Q |
13 |
attattctaaattaaagtctgtgattgtttagctttctaagtgaatatgtgactatattatgttgatgtgaattatttaagtgtaatttacata |
106 |
Q |
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| T |
44953472 |
attattctaaattaaagtatgtgattgtttagctttctaagtgaatatgtgactatattatgttgatgtgaattctttaagtgtaatttacata |
44953379 |
T |
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Target: chr7; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 98 - 187
Target Start/End: Complemental strand, 44952647 - 44952558
Alignment:
| Q |
98 |
atttacatatttgaagtaaagtatcatctgtatgaaaatgtatgtgcgtcgagtcgtgtccaagtgagacgttatctaatctcgagcatg |
187 |
Q |
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| T |
44952647 |
atttacatatttgaagtaaagtatcatctttgtcaaaatgtatgtgcgtcgagtcgtgtccaagtgagacgttatctaatctcgagcatg |
44952558 |
T |
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