View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20453_low_6 (Length: 350)
Name: NF20453_low_6
Description: NF20453
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20453_low_6 |
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Alignment Details
Target: chr7 (Bit Score: 211; Significance: 1e-115; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 20 - 294
Target Start/End: Original strand, 37853495 - 37853769
Alignment:
| Q |
20 |
atatataaaagagacagagaaagccatggtgactttttctcacaaaatcacccaatcctaattagtctatgtttgatatcacggtagatatatcaaaatc |
119 |
Q |
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| T |
37853495 |
atatataaaagagacagagaaagccatggtgactttttctcacaaaatcattaaatcctaattagtctatgtttgatatcacggtagatatattagaatc |
37853594 |
T |
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| Q |
120 |
acgacgacctaacgtcattttaatgaagttacaaattgcagcttttagtgattctgacatactcatcatattaccaaatacatgttatacagagaggaat |
219 |
Q |
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| T |
37853595 |
acgacgacccaacgtgattttaaagaagttataaattacagcttttagtgattctgacacactcatcgtattatcaaatacatgttatacggagaggaat |
37853694 |
T |
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| Q |
220 |
atgagagtttgagaggtaatagatggtaaatttgaatccccttctaaatatttccaagaacattagatgatttgt |
294 |
Q |
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|||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
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| T |
37853695 |
atgatagtttgagaggtaatagatggtaaatttgaatccccgtctaaatatttccaagaacattagatgatttgt |
37853769 |
T |
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