View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20454_high_7 (Length: 348)

Name: NF20454_high_7
Description: NF20454
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20454_high_7
NF20454_high_7
[»] chr7 (25 HSPs)
chr7 (97-348)||(18873169-18873420)
chr7 (102-348)||(15167984-15168230)
chr7 (106-348)||(10895795-10896037)
chr7 (98-340)||(14422802-14423043)
chr7 (91-348)||(12709833-12710090)
chr7 (91-348)||(13122904-13123161)
chr7 (102-340)||(16009395-16009631)
chr7 (91-341)||(13743526-13743774)
chr7 (91-310)||(12590633-12590850)
chr7 (91-310)||(13007281-13007497)
chr7 (104-298)||(16677152-16677348)
chr7 (104-298)||(17651388-17651584)
chr7 (65-157)||(21230923-21231015)
chr7 (78-157)||(20311026-20311107)
chr7 (102-157)||(11382871-11382926)
chr7 (102-157)||(11389348-11389403)
chr7 (65-157)||(148619-148711)
chr7 (102-221)||(13679428-13679548)
chr7 (101-156)||(2971254-2971309)
chr7 (101-156)||(20906461-20906516)
chr7 (102-156)||(11311059-11311113)
chr7 (96-137)||(831628-831669)
chr7 (96-137)||(1196808-1196849)
chr7 (96-137)||(34958578-34958619)
chr7 (102-158)||(46625961-46626017)
[»] chr5 (15 HSPs)
chr5 (97-348)||(22750950-22751201)
chr5 (65-340)||(38144500-38144773)
chr5 (102-340)||(28370055-28370291)
chr5 (102-340)||(19512204-19512441)
chr5 (97-310)||(23528479-23528690)
chr5 (78-157)||(22438723-22438803)
chr5 (65-157)||(42961566-42961658)
chr5 (102-166)||(18407944-18408008)
chr5 (102-166)||(23111200-23111264)
chr5 (65-117)||(1856445-1856497)
chr5 (65-117)||(21674415-21674467)
chr5 (101-156)||(19236900-19236955)
chr5 (90-216)||(34830024-34830150)
chr5 (101-154)||(22461158-22461211)
chr5 (101-154)||(22467782-22467835)
[»] chr3 (24 HSPs)
chr3 (102-348)||(14762758-14763004)
chr3 (104-348)||(38310802-38311046)
chr3 (104-334)||(20247791-20248021)
chr3 (104-341)||(24192771-24193009)
chr3 (102-340)||(9534146-9534382)
chr3 (101-340)||(23370505-23370743)
chr3 (78-270)||(16801444-16801635)
chr3 (101-292)||(24933828-24934016)
chr3 (104-337)||(55499104-55499337)
chr3 (91-310)||(41455087-41455304)
chr3 (102-163)||(18929239-18929300)
chr3 (102-166)||(17240513-17240577)
chr3 (65-117)||(24122221-24122273)
chr3 (65-117)||(13967762-13967814)
chr3 (65-117)||(13973237-13973289)
chr3 (101-156)||(13302240-13302295)
chr3 (101-156)||(13323787-13323842)
chr3 (101-215)||(10389443-10389557)
chr3 (101-215)||(10414532-10414646)
chr3 (101-215)||(10421202-10421316)
chr3 (101-156)||(12033444-12033499)
chr3 (101-156)||(13312896-13312951)
chr3 (101-156)||(17131732-17131787)
chr3 (101-156)||(51301589-51301644)
[»] scaffold0026 (2 HSPs)
scaffold0026 (85-348)||(11834-12097)
scaffold0026 (101-340)||(111504-111741)
[»] chr6 (24 HSPs)
chr6 (102-335)||(23057760-23057993)
chr6 (91-348)||(29614136-29614393)
chr6 (102-340)||(23839016-23839253)
chr6 (65-340)||(18800255-18800529)
chr6 (91-340)||(10986170-10986418)
chr6 (102-337)||(4477678-4477912)
chr6 (91-236)||(930085-930229)
chr6 (104-340)||(21565214-21565449)
chr6 (91-310)||(12168212-12168428)
chr6 (91-310)||(19287121-19287337)
chr6 (91-310)||(19785859-19786075)
chr6 (91-310)||(19878305-19878521)
chr6 (91-310)||(19884081-19884297)
chr6 (101-290)||(34639986-34640173)
chr6 (101-290)||(34646660-34646847)
chr6 (65-157)||(24512807-24512899)
chr6 (101-215)||(25469704-25469816)
chr6 (102-298)||(9187352-9187550)
chr6 (102-158)||(25397172-25397228)
chr6 (102-158)||(19471335-19471391)
chr6 (102-158)||(25348486-25348542)
chr6 (101-185)||(31252394-31252478)
chr6 (104-158)||(25598643-25598697)
chr6 (65-116)||(933615-933666)
[»] scaffold1773 (1 HSPs)
scaffold1773 (94-348)||(988-1240)
[»] scaffold0006 (1 HSPs)
scaffold0006 (94-348)||(49989-50241)
[»] chr4 (13 HSPs)
chr4 (91-348)||(8045822-8046078)
chr4 (91-348)||(11847916-11848179)
chr4 (101-290)||(53483573-53483760)
chr4 (65-157)||(15408139-15408231)
chr4 (101-291)||(27906130-27906321)
chr4 (102-158)||(8834895-8834951)
chr4 (102-158)||(13888641-13888697)
chr4 (104-185)||(14486632-14486713)
chr4 (102-158)||(15245215-15245271)
chr4 (107-158)||(22724691-22724742)
chr4 (65-116)||(43284008-43284059)
chr4 (96-137)||(15747551-15747592)
chr4 (102-158)||(15308120-15308176)
[»] scaffold0029 (1 HSPs)
scaffold0029 (91-310)||(111728-111948)
[»] scaffold0924 (1 HSPs)
scaffold0924 (91-348)||(740-997)
[»] chr2 (19 HSPs)
chr2 (102-340)||(19661454-19661690)
chr2 (102-340)||(6483536-6483772)
chr2 (102-340)||(6487003-6487239)
chr2 (91-298)||(26583687-26583892)
chr2 (104-340)||(23089057-23089292)
chr2 (104-340)||(23878826-23879060)
chr2 (102-340)||(23101463-23101700)
chr2 (101-215)||(5706023-5706137)
chr2 (65-116)||(6260135-6260186)
chr2 (102-166)||(23265133-23265197)
chr2 (102-166)||(23280201-23280265)
chr2 (102-163)||(21908353-21908414)
chr2 (65-109)||(19665037-19665081)
chr2 (102-158)||(24661576-24661632)
chr2 (101-156)||(10577-10632)
chr2 (91-282)||(23168288-23168483)
chr2 (91-282)||(23579545-23579740)
chr2 (101-156)||(25180929-25180984)
chr2 (92-173)||(26885166-26885246)
[»] scaffold0025 (1 HSPs)
scaffold0025 (104-341)||(14398-14635)
[»] chr8 (17 HSPs)
chr8 (104-348)||(8727735-8727979)
chr8 (101-340)||(44477441-44477678)
chr8 (101-340)||(44492599-44492836)
chr8 (91-348)||(23866423-23866680)
chr8 (65-340)||(27940815-27941091)
chr8 (91-310)||(17054440-17054656)
chr8 (102-211)||(18614217-18614327)
chr8 (65-157)||(14056527-14056619)
chr8 (102-166)||(23482053-23482117)
chr8 (69-157)||(25111976-25112064)
chr8 (65-117)||(30765873-30765925)
chr8 (102-158)||(39364919-39364975)
chr8 (102-156)||(29643386-29643440)
chr8 (101-156)||(24320670-24320725)
chr8 (66-126)||(21325730-21325791)
chr8 (66-125)||(21321132-21321192)
chr8 (102-158)||(21931696-21931752)
[»] scaffold0247 (1 HSPs)
scaffold0247 (65-340)||(11159-11433)
[»] chr1 (12 HSPs)
chr1 (102-340)||(20437024-20437261)
chr1 (91-310)||(41111884-41112100)
chr1 (102-166)||(32651563-32651627)
chr1 (102-157)||(19663517-19663572)
chr1 (102-166)||(18712790-18712854)
chr1 (102-158)||(20805320-20805376)
chr1 (102-157)||(11158093-11158148)
chr1 (104-158)||(10811785-10811839)
chr1 (101-156)||(20851132-20851187)
chr1 (101-156)||(20857759-20857814)
chr1 (101-156)||(21706276-21706331)
chr1 (101-156)||(21710818-21710873)
[»] scaffold0553 (1 HSPs)
scaffold0553 (101-340)||(10195-10433)
[»] scaffold0544 (1 HSPs)
scaffold0544 (101-340)||(1525-1763)
[»] scaffold0117 (2 HSPs)
scaffold0117 (91-348)||(1887-2143)
scaffold0117 (91-348)||(8564-8820)
[»] scaffold0090 (1 HSPs)
scaffold0090 (65-341)||(17985-18261)
[»] scaffold0058 (1 HSPs)
scaffold0058 (91-341)||(109-356)
[»] scaffold0154 (1 HSPs)
scaffold0154 (65-298)||(30715-30949)
[»] scaffold0476 (1 HSPs)
scaffold0476 (104-340)||(3295-3531)
[»] scaffold0077 (1 HSPs)
scaffold0077 (104-340)||(3624-3859)
[»] scaffold0796 (2 HSPs)
scaffold0796 (96-292)||(1727-1920)
scaffold0796 (96-292)||(5750-5943)
[»] scaffold0456 (4 HSPs)
scaffold0456 (97-184)||(904-991)
scaffold0456 (97-184)||(8049-8136)
scaffold0456 (245-341)||(806-901)
scaffold0456 (245-341)||(7951-8046)
[»] scaffold0634 (1 HSPs)
scaffold0634 (261-348)||(3471-3558)
[»] scaffold0107 (1 HSPs)
scaffold0107 (65-157)||(40495-40587)
[»] scaffold0129 (1 HSPs)
scaffold0129 (95-213)||(45268-45386)
[»] scaffold0019 (1 HSPs)
scaffold0019 (68-157)||(135473-135562)
[»] scaffold0235 (1 HSPs)
scaffold0235 (65-155)||(22556-22646)
[»] scaffold0310 (1 HSPs)
scaffold0310 (78-157)||(17643-17723)
[»] scaffold0222 (1 HSPs)
scaffold0222 (102-166)||(16811-16875)
[»] scaffold0004 (1 HSPs)
scaffold0004 (102-166)||(116887-116951)
[»] scaffold0124 (1 HSPs)
scaffold0124 (102-157)||(34276-34331)
[»] scaffold0461 (1 HSPs)
scaffold0461 (102-166)||(8-72)
[»] scaffold0249 (1 HSPs)
scaffold0249 (65-109)||(2212-2256)
[»] scaffold0146 (1 HSPs)
scaffold0146 (102-166)||(13623-13687)
[»] scaffold0020 (1 HSPs)
scaffold0020 (102-166)||(101928-101992)
[»] scaffold0815 (1 HSPs)
scaffold0815 (91-153)||(1453-1515)
[»] scaffold0261 (1 HSPs)
scaffold0261 (91-291)||(23559-23760)
[»] scaffold2054 (1 HSPs)
scaffold2054 (91-190)||(680-780)
[»] scaffold0609 (1 HSPs)
scaffold0609 (101-185)||(5857-5941)
[»] scaffold0317 (1 HSPs)
scaffold0317 (102-221)||(1321-1441)
[»] scaffold0138 (1 HSPs)
scaffold0138 (102-158)||(12296-12352)
[»] scaffold0139 (1 HSPs)
scaffold0139 (102-157)||(14997-15052)
[»] scaffold0790 (1 HSPs)
scaffold0790 (90-123)||(5487-5520)
[»] scaffold0001 (1 HSPs)
scaffold0001 (92-173)||(493019-493099)
[»] scaffold0348 (2 HSPs)
scaffold0348 (68-116)||(14620-14668)
scaffold0348 (101-156)||(9336-9391)
[»] scaffold0096 (1 HSPs)
scaffold0096 (98-158)||(39503-39563)
[»] scaffold0034 (1 HSPs)
scaffold0034 (104-291)||(73149-73337)
[»] scaffold0127 (1 HSPs)
scaffold0127 (101-156)||(10239-10294)
[»] scaffold0023 (1 HSPs)
scaffold0023 (101-156)||(135438-135493)
[»] scaffold1318 (1 HSPs)
scaffold1318 (102-156)||(1913-1967)
[»] scaffold0453 (1 HSPs)
scaffold0453 (101-185)||(10550-10634)
[»] scaffold0335 (1 HSPs)
scaffold0335 (102-158)||(2628-2684)


Alignment Details
Target: chr7 (Bit Score: 224; Significance: 1e-123; HSPs: 25)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 97 - 348
Target Start/End: Complemental strand, 18873420 - 18873169
Alignment:
Q  97 aaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttag 196  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18873420 aaaactaaggtaagggtgagactttctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttag 18873321  T
Q  197 ggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgat 296  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||| ||||| |||||||||    
T  18873320 ggtttgatgatgattctgaagggaaatgggtaatgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgat 18873221  T
Q  297 cataaattgattgagaattatgagcgattggatgaattgatgaatttgtgta 348  Q
    |||||||||||||| ||||||||| |||||||||||||||||||||||||||    
T  18873220 cataaattgattgaaaattatgagtgattggatgaattgatgaatttgtgta 18873169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 102 - 348
Target Start/End: Complemental strand, 15168230 - 15167984
Alignment:
Q  102 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggttt 201  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15168230 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggttt 15168131  T
Q  202 gatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcataa 301  Q
    ||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||| ||||| ||||||||||||||    
T  15168130 gatgatgattctgaagggaaatgggtaatgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcataa 15168031  T
Q  302 attgattgagaattatgagcgattggatgaattgatgaatttgtgta 348  Q
    ||||||||| ||||||||| |||||||||||||||||||||||||||    
T  15168030 attgattgaaaattatgagtgattggatgaattgatgaatttgtgta 15167984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 106 - 348
Target Start/End: Original strand, 10895795 - 10896037
Alignment:
Q  106 gtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagtttt-ggaagataaattgagggttagggtttgat 204  Q
    ||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||    
T  10895795 gtaagggtgagactatctctcaataatcataatctataatttttgaaaattgacctaattgcatagtttttggaagataaattgtgggttagggtttgat 10895894  T
Q  205 gatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcataaatt 304  Q
    ||||||||||| ||||| |||||| | |||||||||||||| |||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||    
T  10895895 gatgattctgaggggaa-tgggtattgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcataaatt 10895993  T
Q  305 gattgagaattatgagcgattggatgaattgatgaatttgtgta 348  Q
    |||||| ||||||||| |||||||||||||||||||||||||||    
T  10895994 gattgaaaattatgagtgattggatgaattgatgaatttgtgta 10896037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 180; E-Value: 4e-97
Query Start/End: Original strand, 98 - 340
Target Start/End: Complemental strand, 14423043 - 14422802
Alignment:
Q  98 aaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatag-ttttggaagataaattgagggttag 196  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  14423043 aaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgagggttag 14422944  T
Q  197 ggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgat 296  Q
    |||||||||||||||||| |||| |||||||| | |||||||||||||||||||||| ||||||| |||||||||||||||||||| |||||| ||||||    
T  14422943 ggtttgatgatgattctg-aggggaatgggtattgatcatgttaattctgttgtaatgtaatgtttagaatgaaaacttaatctatattgttgttgtgat 14422845  T
Q  297 cataaattgattgagaattatgagcgattggatgaattgatgaa 340  Q
    |||||||||||||| ||||||||  |||||||||||||||||||    
T  14422844 cataaattgattga-aattatgattgattggatgaattgatgaa 14422802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 168; E-Value: 5e-90
Query Start/End: Original strand, 91 - 348
Target Start/End: Original strand, 12709833 - 12710090
Alignment:
Q  91 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgag 190  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||| ||||||||||||||||||||||||| ||||||||||    
T  12709833 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatttataattcctgaaa-ttgacctaattgcatagttttggaaaataaattgag 12709931  T
Q  191 ggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattct-gttgtaatataatgttcagaatgaaaacttaatctatgttgttg 289  Q
    ||||||||||||||||||||| ||||| |||||||||||| ||||||||||||||  |||||||||||||||||||||  ||||||||||| ||||||||    
T  12709932 ggttagggtttgatgatgattatgaagagaaatgggtaatgatcatgttaattctatttgtaatataatgttcagaatataaacttaatct-tgttgttg 12710030  T
Q  290 ctgtgatcataaattgattgagaa-ttatgagcgattggatgaattgatgaatttgtgta 348  Q
    |||||||| |||| |||||  ||| ||||||| |||||||||||||||||||||||||||    
T  12710031 ctgtgatcgtaaactgatttggaatttatgagtgattggatgaattgatgaatttgtgta 12710090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 168; E-Value: 5e-90
Query Start/End: Original strand, 91 - 348
Target Start/End: Original strand, 13122904 - 13123161
Alignment:
Q  91 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgag 190  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||| ||||||||||||||||||||||||| ||||||||||    
T  13122904 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatttataattcctgaaa-ttgacctaattgcatagttttggaaaataaattgag 13123002  T
Q  191 ggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattct-gttgtaatataatgttcagaatgaaaacttaatctatgttgttg 289  Q
    ||||||||||||||||||||| ||||| |||||||||||| ||||||||||||||  |||||||||||||||||||||  ||||||||||| ||||||||    
T  13123003 ggttagggtttgatgatgattatgaagagaaatgggtaatgatcatgttaattctatttgtaatataatgttcagaatataaacttaatct-tgttgttg 13123101  T
Q  290 ctgtgatcataaattgattgagaa-ttatgagcgattggatgaattgatgaatttgtgta 348  Q
    |||||||| |||| |||||  ||| ||||||| |||||||||||||||||||||||||||    
T  13123102 ctgtgatcgtaaactgatttggaatttatgagtgattggatgaattgatgaatttgtgta 13123161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 163; E-Value: 5e-87
Query Start/End: Original strand, 102 - 340
Target Start/End: Complemental strand, 16009631 - 16009395
Alignment:
Q  102 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggttt 201  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||| |||||    
T  16009631 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatggttttggaagataaattgtgggttaaggttt 16009532  T
Q  202 gatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcataa 301  Q
    ||||||||||||| |||| |||||||| | |||||||||||||||||||||| ||||||| ||||||||||||||||||||  ||||| |||||||||||    
T  16009531 gatgatgattctg-aggggaatgggtattgatcatgttaattctgttgtaatgtaatgtttagaatgaaaacttaatctatactgttgttgtgatcataa 16009433  T
Q  302 attgattgagaattatgagcgattggatgaattgatgaa 340  Q
    | ||||||| ||||||||  |||||||||||||||||||    
T  16009432 actgattga-aattatgattgattggatgaattgatgaa 16009395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 151; E-Value: 7e-80
Query Start/End: Original strand, 91 - 341
Target Start/End: Complemental strand, 13743774 - 13743526
Alignment:
Q  91 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgag 190  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||| ||||||||||||||||||||||||| ||||||||||    
T  13743774 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatttataattcctgaaa-ttgacctaattgcatagttttggaaaataaattgag 13743676  T
Q  191 ggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgc 290  Q
    ||||||||||||||||||||| ||||| |||||||||||| |||||||||||| | ||||| |||  |||||||| |||| |||||||||||||| ||||    
T  13743675 ggttagggtttgatgatgattatgaagagaaatgggtaatgatcatgttaattttcttgtattatgctgttcagattgaagacttaatctatgttattgc 13743576  T
Q  291 tgtgatcataaattgattgagaattatgagcgattggatgaattgatgaat 341  Q
    ||||||||||||||| |||| |||||||   | |||||| |||||||||||    
T  13743575 tgtgatcataaattggttga-aattatgcttggttggataaattgatgaat 13743526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 91 - 310
Target Start/End: Original strand, 12590633 - 12590850
Alignment:
Q  91 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgag 190  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| |||||||||||| ||||  |||     
T  12590633 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttggaaaataatatgaa 12590731  T
Q  191 ggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgc 290  Q
     |||||||||||||||||||||||| ||  |||| ||||  || |||||| || | ||| ||| ||||||| ||||||||| ||||||| ||||||||||    
T  12590732 agttagggtttgatgatgattctgatgg--aatgagtaaagatgatgttagttttcttggaatttaatgttaagaatgaaagcttaatccatgttgttgc 12590829  T
Q  291 tgtgat-cataaattgattga 310  Q
    ||| || ||| ||||||||||    
T  12590830 tgtaatccattaattgattga 12590850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 91 - 310
Target Start/End: Complemental strand, 13007497 - 13007281
Alignment:
Q  91 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgag 190  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| |||||||||||| ||||  |||     
T  13007497 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttggaaaataagatgaa 13007399  T
Q  191 ggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgc 290  Q
     |||||||||||||||||||||||| ||  |||| ||||  || |||||| || | ||| ||| ||||||| |||| |||| ||||||| ||||||||||    
T  13007398 agttagggtttgatgatgattctgatgg--aatgagtaaagatgatgttagtt-tcttggaatttaatgttaagaacgaaatcttaatccatgttgttgc 13007302  T
Q  291 tgtgat-cataaattgattga 310  Q
    ||| || ||| ||||||||||    
T  13007301 tgtaatccatgaattgattga 13007281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 104 - 298
Target Start/End: Complemental strand, 16677348 - 16677152
Alignment:
Q  104 aggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatag-ttttggaagat-aaattgagggttagggttt 201  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| ||||| |||||||||||||    
T  16677348 aggtaagggtgagactatctctcaataatcataatctataatttctaaaaattgacctaattgcatagtttttggaagataaaattaagggttagggttt 16677249  T
Q  202 gatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatca 298  Q
    |||||||||| ||| | | |  | ||||| |||||||||| | ||||||||  | ||||||||||||||  | ||||||||  ||||||||||||||    
T  16677248 gatgatgattttgaggaggatggtgtaatgatcatgttaaatatgttgtaaagtgatgttcagaatgaattcctaatctataatgttgctgtgatca 16677152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 104 - 298
Target Start/End: Complemental strand, 17651584 - 17651388
Alignment:
Q  104 aggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatag-ttttggaagat-aaattgagggttagggttt 201  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| ||||| |||||||||||||    
T  17651584 aggtaagggtgagactatctctcaataatcataatctataatttctaaaaattgacctaattgcatagtttttggaagataaaattaagggttagggttt 17651485  T
Q  202 gatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatca 298  Q
    |||||||||| ||| | | |  | ||||| |||||||||| | ||||||||  | ||||||||||||||  | ||||||||  ||||||||||||||    
T  17651484 gatgatgattttgaggaggatggtgtaatgatcatgttaaatatgttgtaaagtgatgttcagaatgaattcctaatctataatgttgctgtgatca 17651388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 65 - 157
Target Start/End: Original strand, 21230923 - 21231015
Alignment:
Q  65 taggaaccgattgtgctgtgtaatcattctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattg 157  Q
    |||||||||||| ||||||| |||| ||||||||| |||||||||||||||||||||||||| ||||||||| | ||||||||||||||||||    
T  21230923 taggaaccgattttgctgtgcaatctttctgcaaatctaaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattg 21231015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 78 - 157
Target Start/End: Original strand, 20311026 - 20311107
Alignment:
Q  78 tgctgtgtaatcattctgcaaaa--ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattg 157  Q
    ||||||| |||| ||||||||||  |||||||||||||||||||||||||| ||||||||||  ||||||||||||||||||    
T  20311026 tgctgtgcaatctttctgcaaaaatctaaggtaagggtgagactatctctcaataatcataacgtataatttctgaaaattg 20311107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 102 - 157
Target Start/End: Original strand, 11382871 - 11382926
Alignment:
Q  102 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattg 157  Q
    ||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  11382871 taaggtaagggtgagactatctctcaataatcataatatataatttctgaaaattg 11382926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 102 - 157
Target Start/End: Original strand, 11389348 - 11389403
Alignment:
Q  102 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattg 157  Q
    ||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  11389348 taaggtaagggtgagactatctctcaataatcataatatataatttctgaaaattg 11389403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 65 - 157
Target Start/End: Complemental strand, 148711 - 148619
Alignment:
Q  65 taggaaccgattgtgctgtgtaatcattctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattg 157  Q
    ||||||| ||||||| |||||||||||||||||||||||||||||||||||| ||| |  || || || ||||| |||  |||||||||||||    
T  148711 taggaactgattgtgttgtgtaatcattctgcaaaactaaggtaagggtgaggctaaccttcaatgattataatatatggtttctgaaaattg 148619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 102 - 221
Target Start/End: Complemental strand, 13679548 - 13679428
Alignment:
Q  102 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagat-aaattgagggttagggtt 200  Q
    |||||||||||||||||||||| || || ||||| || |||||||| |||||||||| ||||||  || ||| | || ||| ||| ||||  ||||||||    
T  13679548 taaggtaagggtgagactatctttcaatgatcatgatatataatttttgaaaattgatctaattaaattgttcttgatgataaaactgagaattagggtt 13679449  T
Q  201 tgatgatgattctgaagggaa 221  Q
    ||||| ||||| |||| ||||    
T  13679448 tgatgctgattttgaaaggaa 13679428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 101 - 156
Target Start/End: Complemental strand, 2971309 - 2971254
Alignment:
Q  101 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 156  Q
    |||||||||||||| || ||||| || ||| ||||||| |||||||||||||||||    
T  2971309 ctaaggtaagggtgggattatctttcaatagtcataatttataatttctgaaaatt 2971254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 101 - 156
Target Start/End: Original strand, 20906461 - 20906516
Alignment:
Q  101 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 156  Q
    |||||||||||||| || ||||| || ||| ||||||| |||||||||||||||||    
T  20906461 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 20906516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 102 - 156
Target Start/End: Complemental strand, 11311113 - 11311059
Alignment:
Q  102 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 156  Q
    ||||||||||||||||||||||||| ||||| ||| | || ||||||| ||||||    
T  11311113 taaggtaagggtgagactatctctcaataataatagtgtagaatttctaaaaatt 11311059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 96 - 137
Target Start/End: Original strand, 831628 - 831669
Alignment:
Q  96 caaaactaaggtaagggtgagactatctctcgataatcataa 137  Q
    ||||||||||||||||||||||||| ||||| ||||| ||||    
T  831628 caaaactaaggtaagggtgagactaactctcaataattataa 831669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 96 - 137
Target Start/End: Original strand, 1196808 - 1196849
Alignment:
Q  96 caaaactaaggtaagggtgagactatctctcgataatcataa 137  Q
    ||||||||||||||||||||||||| ||||| ||||| ||||    
T  1196808 caaaactaaggtaagggtgagactaactctcaataattataa 1196849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 96 - 137
Target Start/End: Complemental strand, 34958619 - 34958578
Alignment:
Q  96 caaaactaaggtaagggtgagactatctctcgataatcataa 137  Q
    ||||||||||||||||||||||||| ||||| ||||| ||||    
T  34958619 caaaactaaggtaagggtgagactaactctcaataattataa 34958578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 102 - 158
Target Start/End: Complemental strand, 46626017 - 46625961
Alignment:
Q  102 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattga 158  Q
    |||| |||||||||||||| ||||| || || ||||| ||||||||| |||||||||    
T  46626017 taagataagggtgagactaactctcaatgattataatatataatttcggaaaattga 46625961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 224; Significance: 1e-123; HSPs: 15)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 97 - 348
Target Start/End: Complemental strand, 22751201 - 22750950
Alignment:
Q  97 aaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttag 196  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22751201 aaaactaaggtaagggtgagactttctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttag 22751102  T
Q  197 ggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgat 296  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||| ||||| |||||||||    
T  22751101 ggtttgatgatgattctgaagggaaatgggtaatgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgat 22751002  T
Q  297 cataaattgattgagaattatgagcgattggatgaattgatgaatttgtgta 348  Q
    |||||||||||||| ||||||||| |||||||||||||||||||||||||||    
T  22751001 cataaattgattgaaaattatgagtgattggatgaattgatgaatttgtgta 22750950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 65 - 340
Target Start/End: Original strand, 38144500 - 38144773
Alignment:
Q  65 taggaaccgattgtgctgtgtaatcattctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaat 164  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  38144500 taggaaccgattgtgctgtgtaatcattctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaat 38144599  T
Q  165 tgcatagttttggaagataaattgagggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcag 264  Q
    |||||| |||||||| |||||||||||||||||||||||||||||||||| |||| |||||||| | |||||||||||||| ||||||| ||||||| ||    
T  38144600 tgcataattttggaaaataaattgagggttagggtttgatgatgattctg-aggggaatgggtattgatcatgttaattctattgtaatgtaatgtttag 38144698  T
Q  265 aatgaaaacttaatctatgttgttgctgtgatcataaattgattgagaattatgagcgattggatgaattgatgaa 340  Q
    ||||||||||||||||||  ||||| |||||||||||||||||||| ||||| ||  |||||||||||||||||||    
T  38144699 aatgaaaacttaatctatactgttgttgtgatcataaattgattga-aattacgattgattggatgaattgatgaa 38144773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 163; E-Value: 5e-87
Query Start/End: Original strand, 102 - 340
Target Start/End: Original strand, 28370055 - 28370291
Alignment:
Q  102 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggttt 201  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  28370055 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataaattgagggttagggttt 28370154  T
Q  202 gatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcataa 301  Q
    |||||||||| || |||| |||||||| | |||||||||||||||||||||  ||||||| ||||||||||||||||||||  ||||| |||||||||||    
T  28370155 gatgatgattttg-aggggaatgggtattgatcatgttaattctgttgtaacgtaatgtttagaatgaaaacttaatctatactgttgttgtgatcataa 28370253  T
Q  302 attgattgagaattatgagcgattggatgaattgatgaa 340  Q
    ||||||||| ||||||||  ||| |||||||||||||||    
T  28370254 attgattga-aattatgattgatgggatgaattgatgaa 28370291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 102 - 340
Target Start/End: Complemental strand, 19512441 - 19512204
Alignment:
Q  102 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatag-ttttggaagataaattgagggttagggtt 200  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  19512441 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgagggttagggtt 19512342  T
Q  201 tgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcata 300  Q
    ||||||||||| || |||| |||||||| | |||||||||||||| ||||||  ||||||| ||||||||||||||||||||  ||||| ||||||||||    
T  19512341 tgatgatgattttg-aggggaatgggtattgatcatgttaattctattgtaacgtaatgtttagaatgaaaacttaatctatactgttgttgtgatcata 19512243  T
Q  301 aattgattgagaattatgagcgattggatgaattgatgaa 340  Q
    |||||||||| ||||||||  |||||||||||||||||||    
T  19512242 aattgattga-aattatgattgattggatgaattgatgaa 19512204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 97 - 310
Target Start/End: Complemental strand, 23528690 - 23528479
Alignment:
Q  97 aaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttag 196  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| |||||||||||| ||||  |||  |||||    
T  23528690 aaaactaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttggaaaataagatgaaagttag 23528592  T
Q  197 ggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgat 296  Q
    ||||||||||||||||||| ||  |||| ||||  || |||||| || | ||| ||| ||||||| |||| |||| ||||||| ||||||||||||| ||    
T  23528591 ggtttgatgatgattctgatgg--aatgagtaaggatgatgttagttttcttggaatttaatgttaagaacgaaatcttaatccatgttgttgctgtaat 23528494  T
Q  297 -cataaattgattga 310  Q
     ||| ||||||||||    
T  23528493 ccatgaattgattga 23528479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 78 - 157
Target Start/End: Original strand, 22438723 - 22438803
Alignment:
Q  78 tgctgtgtaatcattctgcaaaa-ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattg 157  Q
    ||||||| |||| |||||||||| |||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  22438723 tgctgtgcaatctttctgcaaaatctaaggtaagggtgagactatctctcaataatcataatgtataatttctgaaaattg 22438803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 65 - 157
Target Start/End: Complemental strand, 42961658 - 42961566
Alignment:
Q  65 taggaaccgattgtgctgtgtaatcattctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattg 157  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |  || || || ||||| ||| ||||||||||||||    
T  42961658 taggaaccgattgtgctgtgtaatcattctgcaaaactaaggtaagggtgaggctaaccttcaatgattataatatatgatttctgaaaattg 42961566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 102 - 166
Target Start/End: Original strand, 18407944 - 18408008
Alignment:
Q  102 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattg 166  Q
    ||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||| |||||||    
T  18407944 taaggtaagggtgagactatctctcaataatcataatatataatttctgaaaattgatctaattg 18408008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 102 - 166
Target Start/End: Original strand, 23111200 - 23111264
Alignment:
Q  102 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattg 166  Q
    ||||||||||||||||||||||||| ||||||||| | ||||||||||||||||||| |||||||    
T  23111200 taaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattg 23111264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 65 - 117
Target Start/End: Original strand, 1856445 - 1856497
Alignment:
Q  65 taggaaccgattgtgctgtgtaatcattctgcaaaactaaggtaagggtgaga 117  Q
    ||||||||||||||||||| ||||| |||||||||||||||||||||||||||    
T  1856445 taggaaccgattgtgctgtttaatctttctgcaaaactaaggtaagggtgaga 1856497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 65 - 117
Target Start/End: Original strand, 21674415 - 21674467
Alignment:
Q  65 taggaaccgattgtgctgtgtaatcattctgcaaaactaaggtaagggtgaga 117  Q
    ||||||||||||||||||| ||||| |||||||||||||||||||||||||||    
T  21674415 taggaaccgattgtgctgtttaatctttctgcaaaactaaggtaagggtgaga 21674467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 101 - 156
Target Start/End: Complemental strand, 19236955 - 19236900
Alignment:
Q  101 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 156  Q
    |||||||||||||| || ||||| || ||| ||||||| |||||||||||||||||    
T  19236955 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 19236900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 90 - 216
Target Start/End: Complemental strand, 34830150 - 34830024
Alignment:
Q  90 attctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagat-aaattg 188  Q
    |||||||||  |||||||||||||| || ||||| || |||||  |||| ||||||||||||||||  | ||||| | |||||| | |||||| ||||||    
T  34830150 attctgcaattctaaggtaagggtgggattatctttcaataatt-taatgtataatttctgaaaatcaatctaatagaatagttcttgaagataaaattg 34830052  T
Q  189 agggttagggtttgatgatgattctgaa 216  Q
    ||  ||||||| ||||| ||||| ||||    
T  34830051 agaattagggtatgatgctgattttgaa 34830024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 101 - 154
Target Start/End: Complemental strand, 22461211 - 22461158
Alignment:
Q  101 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaa 154  Q
    |||||||||||||| || ||||| || ||| ||||||| |||||||||||||||    
T  22461211 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaa 22461158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 101 - 154
Target Start/End: Complemental strand, 22467835 - 22467782
Alignment:
Q  101 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaa 154  Q
    |||||||||||||| || ||||| || ||| ||||||| |||||||||||||||    
T  22467835 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaa 22467782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 223; Significance: 1e-123; HSPs: 24)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 102 - 348
Target Start/End: Original strand, 14762758 - 14763004
Alignment:
Q  102 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggttt 201  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14762758 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggttt 14762857  T
Q  202 gatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcataa 301  Q
    ||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||| ||||| ||||||||||||||    
T  14762858 gatgatgattctgaagggaaatgggtaatgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcataa 14762957  T
Q  302 attgattgagaattatgagcgattggatgaattgatgaatttgtgta 348  Q
    ||||||||| ||||||||| |||||||||||||||||||||||||||    
T  14762958 attgattgaaaattatgagtgattggatgaattgatgaatttgtgta 14763004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 104 - 348
Target Start/End: Original strand, 38310802 - 38311046
Alignment:
Q  104 aggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggtttga 203  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38310802 aggtaagggtgagactatctctcgataatcataatctataatttctgaatattgacctaattgcatagttttggaagataaattgagggttagggtttga 38310901  T
Q  204 tgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcataaat 303  Q
    ||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||    
T  38310902 tgatgattctgaagggaaatgggtaatgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcataaat 38311001  T
Q  304 tgattgagaattatgagcgattggatgaattgatgaatttgtgta 348  Q
    ||||||| ||||||||| |||||||||||| ||||||||||||||    
T  38311002 tgattgaaaattatgagtgattggatgaatggatgaatttgtgta 38311046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 104 - 334
Target Start/End: Original strand, 20247791 - 20248021
Alignment:
Q  104 aggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggtttga 203  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20247791 aggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggtttga 20247890  T
Q  204 tgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcataaat 303  Q
    ||||||||||||||||||||||||||| |||||||||||| | |||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||    
T  20247891 tgatgattctgaagggaaatgggtaatgatcatgttaattttcttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcataaat 20247990  T
Q  304 tgattgagaattatgagcgattggatgaatt 334  Q
    ||||||| ||||||||| |||||||||||||    
T  20247991 tgattgaaaattatgagtgattggatgaatt 20248021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 176; E-Value: 9e-95
Query Start/End: Original strand, 104 - 341
Target Start/End: Complemental strand, 24193009 - 24192771
Alignment:
Q  104 aggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagtttt-ggaagataaattgagggttagggtttg 202  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  24193009 aggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgagggttagggtttg 24192910  T
Q  203 atgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtg-atcataa 301  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||| | ||||||||||||||||||||||||||| |||||||||| |||||||    
T  24192909 atgatgattctgaagggaaatgggtaatgatcatgttaattctgttgtaatgtgatgttcagaatgaaaacttaatctatgctgttgctgtgaatcataa 24192810  T
Q  302 attgattgagaattatgagcgattggatgaattgatgaat 341  Q
    | ||||||| || |||||  |||||||| |||||||||||    
T  24192809 actgattga-aaatatgattgattggataaattgatgaat 24192771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 102 - 340
Target Start/End: Complemental strand, 9534382 - 9534146
Alignment:
Q  102 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggttt 201  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  9534382 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataaattgagggttagggttt 9534283  T
Q  202 gatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcataa 301  Q
    ||||||||||||| || | |||||||| | |||||||||||||||||||||| ||||||| ||||||||||||||||||||  |||||  ||||||||||    
T  9534282 gatgatgattctg-agtggaatgggtattgatcatgttaattctgttgtaatgtaatgtttagaatgaaaacttaatctatactgttgtcgtgatcataa 9534184  T
Q  302 attgattgagaattatgagcgattggatgaattgatgaa 340  Q
    ||||||||| ||||||||  |||||||||||||||||||    
T  9534183 attgattga-aattatgattgattggatgaattgatgaa 9534146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 101 - 340
Target Start/End: Original strand, 23370505 - 23370743
Alignment:
Q  101 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatag-ttttggaagataaattgagggttagggt 199  Q
    |||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||    
T  23370505 ctaaggtaagggtgggactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgtgggttagggt 23370604  T
Q  200 ttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcat 299  Q
    ||||||||||||||| |||| |||||||| | |||||||||||||||||||||| ||||||| ||||||||||||||||||||  ||||| |||||||||    
T  23370605 ttgatgatgattctg-aggggaatgggtattgatcatgttaattctgttgtaatgtaatgtttagaatgaaaacttaatctatactgttgttgtgatcat 23370703  T
Q  300 aaattgattgagaattatgagcgattggatgaattgatgaa 340  Q
    ||||||||||| ||||||||  |||||||||||||||||||    
T  23370704 aaattgattga-aattatgattgattggatgaattgatgaa 23370743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 78 - 270
Target Start/End: Original strand, 16801444 - 16801635
Alignment:
Q  78 tgctgtgtaatcattctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttgg 177  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||| |||||||| || |||||||||||||||||||||| ||||| ||| ||| |    
T  16801444 tgctgtgtaatccttctgcaaaactaaggtaagggtgagactatctctcaataatcat-atatataatttctgaaaattgacctgattgcttagcttttg 16801542  T
Q  178 aagat-aaattgagggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaa 270  Q
    ||||| ||||||| |||||||| |||||||||||| ||| | |||  | ||||| |||||||||| | || |||||| | ||||| ||||||||    
T  16801543 aagataaaattgaaggttaggg-ttgatgatgattttgaggagaatggtgtaatgatcatgttaaatatgctgtaatgtgatgtttagaatgaa 16801635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 101 - 292
Target Start/End: Original strand, 24933828 - 24934016
Alignment:
Q  101 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggtt 200  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| |||||||||||| ||||  |||   ||||||||    
T  24933828 ctaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttggaaaataatatgaaaattagggtt 24933926  T
Q  201 tgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctg 292  Q
    ||||||||||||||| ||  |||| ||||  || |||||| || | | | ||| ||||||| ||||||||| ||||||| ||||||||||||    
T  24933927 tgatgatgattctgatgg--aatgagtaaagatgatgttagttttctcggaatttaatgttaagaatgaaagcttaatccatgttgttgctg 24934016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 104 - 337
Target Start/End: Original strand, 55499104 - 55499337
Alignment:
Q  104 aggtaagggtgagactatctctcgataatc-ataatctataatttctg-aaaattgacctaattgcatagttttggaagataaa-ttgagggttagggtt 200  Q
    |||||||||||||||||||||||  ||||  ||||| | ||||||| | ||||||||||||| ||| ||   ||| | |||||| |||||||||||||||    
T  55499104 aggtaagggtgagactatctctcattaatagataatatgtaatttcgggaaaattgacctaactgcttaaccttg-aggataaaattgagggttagggtt 55499202  T
Q  201 tgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcata 300  Q
    ||||||||||||||| ||||| |||||||| |||||||||||| ||||||||| | |||||| |||||||| ||||||||||   |||||||||||||||    
T  55499203 tgatgatgattctgaggggaa-tgggtaatgatcatgttaattatgttgtaatgtgatgttcggaatgaaatcttaatctatacagttgctgtgatcata 55499301  T
Q  301 aattgattgagaattatgagcgattggatgaattgat 337  Q
    |||||||||| || ||| |  ||||||||||||||||    
T  55499302 aattgattga-aaatataattgattggatgaattgat 55499337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 91 - 310
Target Start/End: Original strand, 41455087 - 41455304
Alignment:
Q  91 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgag 190  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| |||||||||||| |||   |||     
T  41455087 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttggaaaataggatgaa 41455185  T
Q  191 ggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgc 290  Q
      |||||| |||||||||||||||| ||  |||| ||||  || |||||| || | ||| ||| ||||||  ||||||||| ||||||| || | |||||    
T  41455186 aattagggattgatgatgattctgatgg--aatgagtaaagatgatgttagttttcttgaaatttaatgtcaagaatgaaatcttaatccatatggttgc 41455283  T
Q  291 tgtgat-cataaattgattga 310  Q
    ||| || ||| ||||||||||    
T  41455284 tgtaatccatgaattgattga 41455304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 102 - 163
Target Start/End: Complemental strand, 18929300 - 18929239
Alignment:
Q  102 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaa 163  Q
    ||||||||||||||||||||||||| |||||||| || ||||||||||||||||||| ||||    
T  18929300 taaggtaagggtgagactatctctcaataatcatgatatataatttctgaaaattgatctaa 18929239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 102 - 166
Target Start/End: Original strand, 17240513 - 17240577
Alignment:
Q  102 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattg 166  Q
    ||||||||||||||||||||||||| |||||| ||||  |||||||||||||||||| |||||||    
T  17240513 taaggtaagggtgagactatctctcaataatcttaatacataatttctgaaaattgatctaattg 17240577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 65 - 117
Target Start/End: Original strand, 24122221 - 24122273
Alignment:
Q  65 taggaaccgattgtgctgtgtaatcattctgcaaaactaaggtaagggtgaga 117  Q
    ||||||||||||||||||| ||||| |||||||||||||||||||||||||||    
T  24122221 taggaaccgattgtgctgtttaatctttctgcaaaactaaggtaagggtgaga 24122273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 65 - 117
Target Start/End: Original strand, 13967762 - 13967814
Alignment:
Q  65 taggaaccgattgtgctgtgtaatcattctgcaaaactaaggtaagggtgaga 117  Q
    ||||||||||||||||||| | ||| |||||||||||||||||||||||||||    
T  13967762 taggaaccgattgtgctgttttatctttctgcaaaactaaggtaagggtgaga 13967814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 65 - 117
Target Start/End: Original strand, 13973237 - 13973289
Alignment:
Q  65 taggaaccgattgtgctgtgtaatcattctgcaaaactaaggtaagggtgaga 117  Q
    ||||||||||||||||||| | ||| |||||||||||||||||||||||||||    
T  13973237 taggaaccgattgtgctgttttatctttctgcaaaactaaggtaagggtgaga 13973289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 101 - 156
Target Start/End: Original strand, 13302240 - 13302295
Alignment:
Q  101 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 156  Q
    ||||||||||||||||| ||||| || ||||||||||| | |||||||||||||||    
T  13302240 ctaaggtaagggtgagattatctttcaataatcataatatgtaatttctgaaaatt 13302295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 101 - 156
Target Start/End: Original strand, 13323787 - 13323842
Alignment:
Q  101 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 156  Q
    ||||||||||||||||| ||||| || ||||||||||| | |||||||||||||||    
T  13323787 ctaaggtaagggtgagattatctttcaataatcataatatgtaatttctgaaaatt 13323842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 101 - 215
Target Start/End: Original strand, 10389443 - 10389557
Alignment:
Q  101 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggtt 200  Q
    |||||||||||||| || ||||| || || || ||||| ||||||||||||||| | | ||||||| ||||||||  |  ||||  |||   ||||||||    
T  10389443 ctaaggtaagggtgggattatctttcaatgattataatgtataatttctgaaaagtaatctaattgaatagtttttaagaataatatgaaaattagggtt 10389542  T
Q  201 tgatgatgattctga 215  Q
    |||||||||||||||    
T  10389543 tgatgatgattctga 10389557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 101 - 215
Target Start/End: Original strand, 10414532 - 10414646
Alignment:
Q  101 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggtt 200  Q
    |||||||||||||| || ||||| || || || ||||| ||||||||||||||| | | ||||||| ||||||||  |  ||||  |||   ||||||||    
T  10414532 ctaaggtaagggtgggattatctttcaatgattataatgtataatttctgaaaagtaatctaattgaatagtttttaagaataatatgaaaattagggtt 10414631  T
Q  201 tgatgatgattctga 215  Q
    |||||||||||||||    
T  10414632 tgatgatgattctga 10414646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 101 - 215
Target Start/End: Original strand, 10421202 - 10421316
Alignment:
Q  101 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggtt 200  Q
    |||||||||||||| || ||||| || || || ||||| ||||||||||||||| | | ||||||| ||||||||  |  ||||  |||   ||||||||    
T  10421202 ctaaggtaagggtgggattatctttcaatgattataatgtataatttctgaaaagtaatctaattgaatagtttttaagaataatatgaaaattagggtt 10421301  T
Q  201 tgatgatgattctga 215  Q
    |||||||||||||||    
T  10421302 tgatgatgattctga 10421316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 101 - 156
Target Start/End: Original strand, 12033444 - 12033499
Alignment:
Q  101 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 156  Q
    |||||||||||||| || ||||| || ||| ||||||| |||||||||||||||||    
T  12033444 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 12033499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 101 - 156
Target Start/End: Original strand, 13312896 - 13312951
Alignment:
Q  101 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 156  Q
    ||||||||||||||||| ||||| || ||||||||||| | |||||| ||||||||    
T  13312896 ctaaggtaagggtgagattatctttcaataatcataatatgtaatttttgaaaatt 13312951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 101 - 156
Target Start/End: Complemental strand, 17131787 - 17131732
Alignment:
Q  101 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 156  Q
    |||||||||||||| || ||||| || ||| ||||||| |||||||||||||||||    
T  17131787 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 17131732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 101 - 156
Target Start/End: Complemental strand, 51301644 - 51301589
Alignment:
Q  101 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 156  Q
    ||||||||||||||||| |||||  | ||||||||||| | |||||||||||||||    
T  51301644 ctaaggtaagggtgagattatcttccaataatcataatatgtaatttctgaaaatt 51301589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 216; Significance: 1e-118; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 85 - 348
Target Start/End: Original strand, 11834 - 12097
Alignment:
Q  85 taatcattctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataa 184  Q
    ||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  11834 taatctttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataa 11933  T
Q  185 attgagggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgt 284  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| ||||||||||||||||||||| |||    
T  11934 attgagagttagggtttgatgatgattctgaagggaaatgggtaatgatcatgttaattctcttgtaatataatcttcagaatgaaaacttaatctttgt 12033  T
Q  285 tgttgctgtgatcataaattgattgagaattatgagcgattggatgaattgatgaatttgtgta 348  Q
    ||||||||||||||||| |||||||| | ||||||| |||||||||||||||||||||||||||    
T  12034 tgttgctgtgatcataagttgattgaaatttatgagtgattggatgaattgatgaatttgtgta 12097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 176; E-Value: 9e-95
Query Start/End: Original strand, 101 - 340
Target Start/End: Complemental strand, 111741 - 111504
Alignment:
Q  101 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggtt 200  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  111741 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataaattgagggttagggtt 111642  T
Q  201 tgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcata 300  Q
    |||||||||||||| |||| |||||||| | |||||||||||||||||||||| ||||||| ||||||||||||||||||||  ||||| ||||||||||    
T  111641 tgatgatgattctg-aggggaatgggtattgatcatgttaattctgttgtaatgtaatgtttagaatgaaaacttaatctatactgttgttgtgatcata 111543  T
Q  301 aattgattgagaattatgagcgattggatgaattgatgaa 340  Q
    |||||||||| ||||||||  |||||||||||||||||||    
T  111542 aattgattga-aattatgattgattggatgaattgatgaa 111504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 206; Significance: 1e-112; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 102 - 335
Target Start/End: Complemental strand, 23057993 - 23057760
Alignment:
Q  102 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggttt 201  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23057993 taaggtaagggtgagactatctctcgataatcataatctataattcctgaaaattgacctaattgcatagttttggaagataaattgagggttagggttt 23057894  T
Q  202 gatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcataa 301  Q
    ||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||| ||||| ||||||||||||||    
T  23057893 gatgatgattctgaagggaaatgggtaatgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcataa 23057794  T
Q  302 attgattgagaattatgagcgattggatgaattg 335  Q
    ||||||||| ||||||||| ||||||||||||||    
T  23057793 attgattgaaaattatgagtgattggatgaattg 23057760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 91 - 348
Target Start/End: Original strand, 29614136 - 29614393
Alignment:
Q  91 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttgg-aagataaattga 189  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| |||||| || |||||||||    
T  29614136 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctagttgcataattttggaaaaataaattga 29614235  T
Q  190 gggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttg 289  Q
    |||||||||||||||||||||| |||||||||||||||||| |||||||||||||| |||| ||  |||||| |||||||||||||||||| ||||||||    
T  29614236 gggttagggtttgatgatgattatgaagggaaatgggtaatgatcatgttaattctcttgt-attgaatgtttagaatgaaaacttaatctttgttgttg 29614334  T
Q  290 ctgtgatcataaattgattgagaattatgagcgattggatgaattgatgaatttgtgta 348  Q
    |||||||||||| |||||||| | ||||||  |||||||||||||||||||||||||||    
T  29614335 ctgtgatcataacttgattgaaatttatgaatgattggatgaattgatgaatttgtgta 29614393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 176; E-Value: 9e-95
Query Start/End: Original strand, 102 - 340
Target Start/End: Complemental strand, 23839253 - 23839016
Alignment:
Q  102 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagt-tttggaagataaattgagggttagggtt 200  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  23839253 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtgtttggaagataaattgagggttagggtt 23839154  T
Q  201 tgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcata 300  Q
    ||||||||||||| ||||| |||||||| | |||||||||||||||||||||| ||||||||||||||||||||||||||||  ||||| ||||||||||    
T  23839153 tgatgatgattct-aaggggaatgggtattgatcatgttaattctgttgtaatgtaatgttcagaatgaaaacttaatctatactgttgttgtgatcata 23839055  T
Q  301 aattgattgagaattatgagcgattggatgaattgatgaa 340  Q
    |||||||||| ||||||||  |||||||||||||||||||    
T  23839054 aattgattga-aattatgattgattggatgaattgatgaa 23839016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 173; E-Value: 6e-93
Query Start/End: Original strand, 65 - 340
Target Start/End: Complemental strand, 18800529 - 18800255
Alignment:
Q  65 taggaaccgattgtgctgtgtaatcattctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaat 164  Q
    |||||||||||| |||||||||||| |||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  18800529 taggaaccgattttgctgtgtaatccttctgcaaaactaatgtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaat 18800430  T
Q  165 tgcatagttttggaagata-aattgagggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttca 263  Q
    ||| ||||||||||| ||| ||||||||||||||||||||||||||||||| |||| |||| ||||| |||||||||||||||||||||| | |||||||    
T  18800429 tgcttagttttggaaaatagaattgagggttagggtttgatgatgattctggaggg-aatgagtaatgatcatgttaattctgttgtaatgtgatgttca 18800331  T
Q  264 gaatgaaaacttaatctatgttgttgctgtgatcataaattgattgagaattatgagcgattggatgaattgatgaa 340  Q
     ||||||| |||||||||| |||||| |||||||| ||||||||||| || ||| |  |||||||||||||||||||    
T  18800330 aaatgaaatcttaatctatattgttgttgtgatcacaaattgattga-aaatataattgattggatgaattgatgaa 18800255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 91 - 340
Target Start/End: Original strand, 10986170 - 10986418
Alignment:
Q  91 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagtttt-ggaagataaattga 189  Q
    ||||||||  ||||||||||||||||||||||| || |||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||    
T  10986170 ttctgcaattctaaggtaagggtgagactatctttcaataatcataatctataatttctaaaaattgacctaattgcatagtttttggaagataaattga 10986269  T
Q  190 gggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttg 289  Q
    |||||||||||||||||||||||||| ||||| |||||| | |||||||||||||||||||||| ||||||||||||||||||||||||||||  |||||    
T  10986270 gggttagggtttgatgatgattctgaggggaa-tgggtattgatcatgttaattctgttgtaatgtaatgttcagaatgaaaacttaatctatactgttg 10986368  T
Q  290 ctgtgatcataaattgattgagaattatgagcgattggatgaattgatgaa 340  Q
     |||||||||||||||||||| ||||| ||  |||||||||||||||||||    
T  10986369 ttgtgatcataaattgattga-aattacgattgattggatgaattgatgaa 10986418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 161; E-Value: 8e-86
Query Start/End: Original strand, 102 - 337
Target Start/End: Complemental strand, 4477912 - 4477678
Alignment:
Q  102 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatag-ttttggaagataaattgagggttagggtt 200  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||    
T  4477912 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgtgggttagggtt 4477813  T
Q  201 tgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcata 300  Q
    |||||||||||||| |||| |||||||| | |||||| ||||||||||||||| ||||||| |||||||||||||||||||| |||||| ||||||||||    
T  4477812 tgatgatgattctg-aggggaatgggtattgatcatgctaattctgttgtaatgtaatgtttagaatgaaaacttaatctatattgttgttgtgatcata 4477714  T
Q  301 aattgattgagaattatgagcgattggatgaattgat 337  Q
    |||||||||| ||||||||  |||||||||| |||||    
T  4477713 aattgattga-aattatgattgattggatgatttgat 4477678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 91 - 236
Target Start/End: Original strand, 930085 - 930229
Alignment:
Q  91 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgag 190  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||| ||||||||| || ||||||||||    
T  930085 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctatagtttctgaaaattgacctaattgtatagttttgaaaaataaattgag 930184  T
Q  191 ggttagggtttgatgatgattctgaagggaaatgggtaataatcat 236  Q
    |||||||||||||||||| |||||||||| |||||||||| |||||    
T  930185 ggttagggtttgatgatgtttctgaaggg-aatgggtaatgatcat 930229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 104 - 340
Target Start/End: Original strand, 21565214 - 21565449
Alignment:
Q  104 aggtaagggtgagactatctctcgataatc-ataatctataatttctgaaaattgacctaattgcatagttttggaagataaa-ttgagggttagggttt 201  Q
    |||||||||||||||||||||||  ||||  ||||| | ||||||| |||||||||||||||||| ||   ||| | |||||| ||||||||||||||||    
T  21565214 aggtaagggtgagactatctctcattaatagataatatttaatttcggaaaattgacctaattgcttaaccttg-aggataaaattgagggttagggttt 21565312  T
Q  202 gatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcataa 301  Q
    |||||||||||| ||||| |||||||||| |||||||||||| ||||||||| | | |||| |||||||| ||||||||||  |||||||||||||||||    
T  21565313 gatgatgattct-aaggggaatgggtaatgatcatgttaattatgttgtaatgtgacgttcggaatgaaatcttaatctatactgttgctgtgatcataa 21565411  T
Q  302 attgattgagaattatgagcgattggatgaattgatgaa 340  Q
    ||||||||| || ||| |  |||||||||||||||||||    
T  21565412 attgattga-aaatataattgattggatgaattgatgaa 21565449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 91 - 310
Target Start/End: Complemental strand, 12168428 - 12168212
Alignment:
Q  91 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgag 190  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| |||||||||||| ||||  |||     
T  12168428 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttggaaaataagatgaa 12168330  T
Q  191 ggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgc 290  Q
     |||||||||||||||||||||||| ||  |||| ||||  || |||||| || | ||| ||| ||||||| |||| |||| ||||||| ||||||||||    
T  12168329 agttagggtttgatgatgattctgatgg--aatgagtaaagatgatgttagtt-tcttggaatttaatgttaagaacgaaatcttaatccatgttgttgc 12168233  T
Q  291 tgtgat-cataaattgattga 310  Q
    ||| || ||| ||||||||||    
T  12168232 tgtaatccatgaattgattga 12168212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 91 - 310
Target Start/End: Complemental strand, 19287337 - 19287121
Alignment:
Q  91 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgag 190  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| |||||||||||| ||||  |||     
T  19287337 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttggaaaataagatgaa 19287239  T
Q  191 ggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgc 290  Q
     |||||||||||||||||||||||| ||  |||| ||||  || |||||| || | ||| ||| ||||||| |||| |||| ||||||| ||||||||||    
T  19287238 agttagggtttgatgatgattctgatgg--aatgagtaaagatgatgttagtt-tcttggaatttaatgttaagaacgaaatcttaatccatgttgttgc 19287142  T
Q  291 tgtgat-cataaattgattga 310  Q
    ||| || ||| ||||||||||    
T  19287141 tgtaatccatgaattgattga 19287121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 91 - 310
Target Start/End: Original strand, 19785859 - 19786075
Alignment:
Q  91 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgag 190  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||| ||| |||||||||||| ||||| |||     
T  19785859 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctagttgaatagttttggaaaataaaatgaa 19785957  T
Q  191 ggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgc 290  Q
     |||||||||||||||||||||||| ||  |||| ||||  || |||||| || | ||| ||| ||||||| |||| |||| ||||||| ||||||||||    
T  19785958 agttagggtttgatgatgattctgatgg--aatgagtaaagatgatgttagtt-tcttggaatttaatgttaagaacgaaatcttaatccatgttgttgc 19786054  T
Q  291 tgtgat-cataaattgattga 310  Q
    ||| || ||| ||||||||||    
T  19786055 tgtaatccatgaattgattga 19786075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 91 - 310
Target Start/End: Complemental strand, 19878521 - 19878305
Alignment:
Q  91 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgag 190  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| |||||||||||| ||||  |||     
T  19878521 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttggaaaataagatgaa 19878423  T
Q  191 ggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgc 290  Q
     |||||||||||||||||||||||| ||  |||| ||||  || |||||| || | ||| ||| ||||||| |||| |||| ||||||| ||||||||||    
T  19878422 agttagggtttgatgatgattctgatgg--aatgagtaaagatgatgttagtt-tcttggaatttaatgttaagaacgaaatcttaatccatgttgttgc 19878326  T
Q  291 tgtgat-cataaattgattga 310  Q
    ||| || ||| ||||||||||    
T  19878325 tgtaatccatgaattgattga 19878305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 91 - 310
Target Start/End: Complemental strand, 19884297 - 19884081
Alignment:
Q  91 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgag 190  Q
    ||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| |||||||||||| ||||  |||     
T  19884297 ttctgcaaaactaaggttagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttggaaaataagatgaa 19884199  T
Q  191 ggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgc 290  Q
     |||||||||||||||||||||||| ||  |||| ||||  || |||||| || | ||| ||| ||||||| |||| |||| ||||||| ||||||||||    
T  19884198 agttagggtttgatgatgattctgatgg--aatgagtaaagatgatgttagtt-tcttggaatttaatgttaagaacgaaatcttaatccatgttgttgc 19884102  T
Q  291 tgtgat-cataaattgattga 310  Q
    ||| || ||| ||||||||||    
T  19884101 tgtaatccatgaattgattga 19884081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 101 - 290
Target Start/End: Original strand, 34639986 - 34640173
Alignment:
Q  101 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggtt 200  Q
    |||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||| |||||||||||| ||||   ||   ||||||||    
T  34639986 ctaaggtaagggtgagactatctctcaataatcttaatctataatttctgaaaattgacctaattgaatagttttggaaaataataagaaaattagggtt 34640085  T
Q  201 tgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgc 290  Q
    |||||||| |||||| ||  |||| ||||  || |||||| || | |   ||| ||| ||| ||||||||||||||||| ||||||||||    
T  34640086 tgatgatggttctgatgg--aatgagtaaagatgatgttagttttctctgaatttaacgttaagaatgaaaacttaatccatgttgttgc 34640173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 101 - 290
Target Start/End: Original strand, 34646660 - 34646847
Alignment:
Q  101 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggtt 200  Q
    |||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||| ||| |||||||| ||||   ||   ||||||||    
T  34646660 ctaaggtaagggtgagactatctctcaataatcttaatctataatttctgaaaattgacctaattgaataattttggaaaataataagaaaattagggtt 34646759  T
Q  201 tgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgc 290  Q
    |||||||| |||||| ||  |||| ||||  || |||||| || | |   ||| ||| ||| ||||||||||||||||| ||||||||||    
T  34646760 tgatgatggttctgatgg--aatgagtaaagatgatgttagttttctctgaatttaacgttaagaatgaaaacttaatccatgttgttgc 34646847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 65 - 157
Target Start/End: Original strand, 24512807 - 24512899
Alignment:
Q  65 taggaaccgattgtgctgtgtaatcattctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattg 157  Q
    |||||||||||| ||||||| |||| ||||||||| ||||||| |||||||||||||||||| ||||||||| | ||||||||||||||||||    
T  24512807 taggaaccgattttgctgtgcaatctttctgcaaatctaaggtgagggtgagactatctctcaataatcatagtatataatttctgaaaattg 24512899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 101 - 215
Target Start/End: Original strand, 25469704 - 25469816
Alignment:
Q  101 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggtt 200  Q
    |||||||||||||||||||||||||| ||||||||||||||||| ||||| ||||||||||||||| || ||||||||| ||||  |||   ||||||||    
T  25469704 ctaaggtaagggtgagactatctctcaataatcataatctataa-ttctg-aaattgacctaattgaatggttttggaaaataatatgaaaattagggtt 25469801  T
Q  201 tgatgatgattctga 215  Q
    ||||||| |||||||    
T  25469802 tgatgataattctga 25469816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 102 - 298
Target Start/End: Complemental strand, 9187550 - 9187352
Alignment:
Q  102 taaggtaagggtgagactatctctcgataatcataatctataatttctg-aaaattgacctaattgcatagttttggaagat--aaattgagggttaggg 198  Q
    ||||||||||||||||||||||||| |||||| ||||  |||||||||| ||||| || ||||||| || ||| | ||| ||  |||||| |  ||||||    
T  9187550 taaggtaagggtgagactatctctcaataatcttaatacataatttctgaaaaatagatctaattgaattgttcttgaatataaaaattgggaattaggg 9187451  T
Q  199 tttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatca 298  Q
     |||||| ||||| |||| ||||    |||| ||||||||| | | ||||||||| || ||||||||||||   ||||||||||  ||||| ||||||||    
T  9187450 -ttgatgctgattttgaaaggaatgatgtaagaatcatgtttaatgtgttgtaatttagtgttcagaatgatttcttaatctataatgttgttgtgatca 9187352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 102 - 158
Target Start/End: Complemental strand, 25397228 - 25397172
Alignment:
Q  102 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattga 158  Q
    ||||||||||||||| ||| |||||||| |||||||| |||||||||||||||||||    
T  25397228 taaggtaagggtgaggctaactctcgatgatcataatatataatttctgaaaattga 25397172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 102 - 158
Target Start/End: Original strand, 19471335 - 19471391
Alignment:
Q  102 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattga 158  Q
    ||||||||||||||| ||| |||||||| |||||||| ||||||||||| |||||||    
T  19471335 taaggtaagggtgaggctacctctcgatgatcataatatataatttctggaaattga 19471391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 102 - 158
Target Start/End: Complemental strand, 25348542 - 25348486
Alignment:
Q  102 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattga 158  Q
    ||||||||||||||||||||||||| ||||| ||| | || ||||||||||||||||    
T  25348542 taaggtaagggtgagactatctctcaataataatagtatagaatttctgaaaattga 25348486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 101 - 185
Target Start/End: Complemental strand, 31252478 - 31252394
Alignment:
Q  101 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaa 185  Q
    ||||||||||||||||| ||||| |  || || ||||| ||||||||||||||||| | ||||||| |||||| | |||||||||    
T  31252478 ctaaggtaagggtgagattatcttttaatgattataatatataatttctgaaaattaatctaattgaatagttcttgaagataaa 31252394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 104 - 158
Target Start/End: Complemental strand, 25598697 - 25598643
Alignment:
Q  104 aggtaagggtgagactatctctcgataatcataatctataatttctgaaaattga 158  Q
    ||||||||||||||||| ||||| || |||||||| |||| ||||||||||||||    
T  25598697 aggtaagggtgagactaactctcaatgatcataatatatattttctgaaaattga 25598643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 65 - 116
Target Start/End: Original strand, 933615 - 933666
Alignment:
Q  65 taggaaccgattgtgctgtgtaatcattctgcaaaactaaggtaagggtgag 116  Q
    |||||||||||| |||| || |||| ||||||||| ||||||||||||||||    
T  933615 taggaaccgattttgctatgcaatctttctgcaaatctaaggtaagggtgag 933666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1773 (Bit Score: 199; Significance: 1e-108; HSPs: 1)
Name: scaffold1773
Description:

Target: scaffold1773; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 94 - 348
Target Start/End: Complemental strand, 1240 - 988
Alignment:
Q  94 tgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggt 193  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||| ||||||||||||||||||||||||| |||||||||||||    
T  1240 tgcaaaactaaggtaagggtgagactatctctcaataatcataatctataattcctgaaa-ttgacctaattgcatagttttggaaaataaattgagggt 1142  T
Q  194 tagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgt 293  Q
    ||||||||||||| |||| |||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||    
T  1141 tagggtttgatgaggattatgaagggaaatgggtaatgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatct-tgttgttgctgt 1043  T
Q  294 gatcataaattgattgagaattatgagcgattggatgaattgatgaatttgtgta 348  Q
    ||||||||||||||||| | ||||||| |||||||||||||||||||||||||||    
T  1042 gatcataaattgattgaaatttatgagtgattggatgaattgatgaatttgtgta 988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 199; Significance: 1e-108; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 94 - 348
Target Start/End: Complemental strand, 50241 - 49989
Alignment:
Q  94 tgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggt 193  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||| ||||||||||||||||||||||||| |||||||||||||    
T  50241 tgcaaaactaaggtaagggtgagactatctctcaataatcataatctataattcctgaaa-ttgacctaattgcatagttttggaaaataaattgagggt 50143  T
Q  194 tagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgt 293  Q
    ||||||||||||| |||| |||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||    
T  50142 tagggtttgatgaggattatgaagggaaatgggtaatgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatct-tgttgttgctgt 50044  T
Q  294 gatcataaattgattgagaattatgagcgattggatgaattgatgaatttgtgta 348  Q
    ||||||||||||||||| | ||||||| |||||||||||||||||||||||||||    
T  50043 gatcataaattgattgaaatttatgagtgattggatgaattgatgaatttgtgta 49989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 198; Significance: 1e-108; HSPs: 13)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 91 - 348
Target Start/End: Original strand, 8045822 - 8046078
Alignment:
Q  91 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgag 190  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||    
T  8045822 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaa-ttgacctaattgcatagttttggaaaataaattgag 8045920  T
Q  191 ggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgc 290  Q
    ||||||||||||| ||  |||||||||||||||||||||  || ||||||||||| |||||||||||||||||||||||||||||||||  |||||||||    
T  8045921 ggttagggtttgacgagaattctgaagggaaatgggtaaagataatgttaattctcttgtaatataatgttcagaatgaaaacttaatccttgttgttgc 8046020  T
Q  291 tgtgatcataaattgattgagaattatgagcgattggatgaattgatgaatttgtgta 348  Q
    |||||||||||||||||||| | ||||||| |||||||||||||||||||||||||||    
T  8046021 tgtgatcataaattgattgaaatttatgagtgattggatgaattgatgaatttgtgta 8046078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 173; E-Value: 6e-93
Query Start/End: Original strand, 91 - 348
Target Start/End: Complemental strand, 11848179 - 11847916
Alignment:
Q  91 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaa----- 185  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| | ||||||||||| || || ||         
T  11848179 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataattcctgaaaattgacctagtggcatagttttgaaaaattaaaatca 11848080  T
Q  186 -ttgagggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgt 284  Q
     ||||||||||||||||||||| |||||||||| | |||||||||| ||||||||||| || || ||||||||||||||||||||||||||||||| |||    
T  11848079 attgagggttagggtttgatgacgattctgaagaggaatgggtaatgatcatgttaatccttttataatataatgttcagaatgaaaacttaatctttgt 11847980  T
Q  285 tgttgctgtgatcataaattgattgagaattatgagcgattggatgaattgatgaatttgtgta 348  Q
    |||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||    
T  11847979 tgttgctgtgatcataaattgattgaaaattatgagtgattggatgaattgatgaatttgtgta 11847916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 101 - 290
Target Start/End: Complemental strand, 53483760 - 53483573
Alignment:
Q  101 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaat-tgagggttagggt 199  Q
    |||||||||||||||||||||||||| ||||||||||||||||||| |||||| |||||||||||| |||||||| ||| |  ||| |||   |||||||    
T  53483760 ctaaggtaagggtgagactatctctcaataatcataatctataattcctgaaa-ttgacctaattgaatagtttttgaaaaataatatgaaaattagggt 53483662  T
Q  200 ttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgc 290  Q
    |||||||||||||||| ||  |||| ||||  || |||||| || | |   ||| ||| ||| ||||||||||||||||| ||||||||||    
T  53483661 ttgatgatgattctgatgg--aatgagtaaagatgatgttagttttctctgaatttaacgttaagaatgaaaacttaatccatgttgttgc 53483573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 65 - 157
Target Start/End: Complemental strand, 15408231 - 15408139
Alignment:
Q  65 taggaaccgattgtgctgtgtaatcattctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattg 157  Q
    |||||||||||| | ||||| |||| ||||||| | |||||||||||||||||||||||||| ||||||||| | ||||||||||||||||||    
T  15408231 taggaaccgatttttctgtgcaatctttctgcagatctaaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattg 15408139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 101 - 291
Target Start/End: Complemental strand, 27906321 - 27906130
Alignment:
Q  101 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagat-aaattgagggttagggt 199  Q
    ||||| |||||||| || ||||| || || |||||||| ||||||||||||||||| |  |||| | |||||| | |||||| ||||||||  |||||||    
T  27906321 ctaagataagggtgggattatctttcaatgatcataatgtataatttctgaaaattaatataatagaatagttcttgaagataaaattgagaattagggt 27906222  T
Q  200 ttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgct 291  Q
     ||||| ||||| |||| | ||| | |||| ||||||||| | | ||||||||| | |||||| | ||||   ||||||||||  |||||||    
T  27906221 gtgatgttgattttgaaagaaaaggtgtaagaatcatgtttaatgtgttgtaatttgatgttccgtatgatttcttaatctataatgttgct 27906130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 102 - 158
Target Start/End: Complemental strand, 8834951 - 8834895
Alignment:
Q  102 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattga 158  Q
    ||||||||||||||| ||| ||||| || |||||||| |||||||||||||||||||    
T  8834951 taaggtaagggtgaggctaactctcaatgatcataatatataatttctgaaaattga 8834895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 102 - 158
Target Start/End: Complemental strand, 13888697 - 13888641
Alignment:
Q  102 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattga 158  Q
    ||||||||||||||| ||| ||||| || |||||||| |||||||||||||||||||    
T  13888697 taaggtaagggtgaggctaactctcaatgatcataatgtataatttctgaaaattga 13888641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 104 - 185
Target Start/End: Complemental strand, 14486713 - 14486632
Alignment:
Q  104 aggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaa 185  Q
    |||||||||||||||||||  || || |||||||| ||||||||||||||||| | | ||||| || ||| | |||||||||    
T  14486713 aggtaagggtgagactatccttcaatgatcataatatataatttctgaaaattaatcgaattgaattgttcttgaagataaa 14486632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 102 - 158
Target Start/End: Complemental strand, 15245271 - 15245215
Alignment:
Q  102 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattga 158  Q
    ||||||||||||||| ||| ||||| || ||| |||| |||||||||||||||||||    
T  15245271 taaggtaagggtgaggctaactctcaatgatcgtaatatataatttctgaaaattga 15245215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 107 - 158
Target Start/End: Original strand, 22724691 - 22724742
Alignment:
Q  107 taagggtgagactatctctcgataatcataatctataatttctgaaaattga 158  Q
    |||||||||||||||||||| ||||| ||| | || ||||||||||||||||    
T  22724691 taagggtgagactatctctcaataataatagtatagaatttctgaaaattga 22724742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 65 - 116
Target Start/End: Original strand, 43284008 - 43284059
Alignment:
Q  65 taggaaccgattgtgctgtgtaatcattctgcaaaactaaggtaagggtgag 116  Q
    ||||||||||||  |||||| |||| ||||||||| ||||||||||||||||    
T  43284008 taggaaccgatttcgctgtgcaatctttctgcaaatctaaggtaagggtgag 43284059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 96 - 137
Target Start/End: Original strand, 15747551 - 15747592
Alignment:
Q  96 caaaactaaggtaagggtgagactatctctcgataatcataa 137  Q
    ||||||||||||||||||||||||| ||||| ||||| ||||    
T  15747551 caaaactaaggtaagggtgagactaactctcaataattataa 15747592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 102 - 158
Target Start/End: Complemental strand, 15308176 - 15308120
Alignment:
Q  102 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattga 158  Q
    |||| |||||||||| ||| ||||| || ||| |||| |||||||||||||||||||    
T  15308176 taagttaagggtgaggctaactctcaatgatcgtaatatataatttctgaaaattga 15308120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 193; Significance: 1e-105; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 91 - 310
Target Start/End: Complemental strand, 111948 - 111728
Alignment:
Q  91 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaa-ttgacctaattgcatagttttggaagataaattga 189  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  111948 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaaattgacctaattgcatagttttggaagataaattga 111849  T
Q  190 gggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttg 289  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||| ||||| ||    
T  111848 gggttagggtttgatgatgattctgaagggaaatgggtaatgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatctttgttgctg 111749  T
Q  290 ctgtgatcataaattgattga 310  Q
    |||||||||||||||||||||    
T  111748 ctgtgatcataaattgattga 111728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0924 (Bit Score: 183; Significance: 6e-99; HSPs: 1)
Name: scaffold0924
Description:

Target: scaffold0924; HSP #1
Raw Score: 183; E-Value: 6e-99
Query Start/End: Original strand, 91 - 348
Target Start/End: Original strand, 740 - 997
Alignment:
Q  91 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatag-ttttggaagataaattga 189  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||    
T  740 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaaaataaattga 839  T
Q  190 gggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttg 289  Q
    ||||||||||||||||| |||| |||||||||||||||||| |||||| |||| || |||||||||||||||||| || |||||||||||| ||||||||    
T  840 gggttagggtttgatgaggattatgaagggaaatgggtaatgatcatgataatactcttgtaatataatgttcaggataaaaacttaatct-tgttgttg 938  T
Q  290 ctgtgatcataaattgattgagaattatgagcgattggatgaattgatgaatttgtgta 348  Q
     |||||||||||| ||||||| | ||||||| |||||||||||||||||||||||||||    
T  939 atgtgatcataaactgattgaaatttatgagtgattggatgaattgatgaatttgtgta 997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 183; Significance: 6e-99; HSPs: 19)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 183; E-Value: 6e-99
Query Start/End: Original strand, 102 - 340
Target Start/End: Original strand, 19661454 - 19661690
Alignment:
Q  102 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggttt 201  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19661454 taaggtaagggtgagactttctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggttt 19661553  T
Q  202 gatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcataa 301  Q
    ||||||||||||| |||| |||||||| | |||||||||||||||||||||| ||||||| |||||||||||||||||||| |||||| |||||||||||    
T  19661554 gatgatgattctg-aggggaatgggtattgatcatgttaattctgttgtaatgtaatgtttagaatgaaaacttaatctatattgttgttgtgatcataa 19661652  T
Q  302 attgattgagaattatgagcgattggatgaattgatgaa 340  Q
    ||||||||| ||||||||  |||||||||||||||||||    
T  19661653 attgattga-aattatgattgattggatgaattgatgaa 19661690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 163; E-Value: 5e-87
Query Start/End: Original strand, 102 - 340
Target Start/End: Complemental strand, 6483772 - 6483536
Alignment:
Q  102 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggttt 201  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  6483772 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataaattgagggttagggttt 6483673  T
Q  202 gatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcataa 301  Q
    |||||||||| || |||| |||||||| | |||||||||||||||||||||  ||||||| ||||||||||||||||||||  ||||| |||||||||||    
T  6483672 gatgatgattttg-aggggaatgggtattgatcatgttaattctgttgtaacgtaatgtttagaatgaaaacttaatctatactgttgttgtgatcataa 6483574  T
Q  302 attgattgagaattatgagcgattggatgaattgatgaa 340  Q
    ||||||||| ||||||||  ||| |||||||||||||||    
T  6483573 attgattga-aattatgattgatgggatgaattgatgaa 6483536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 163; E-Value: 5e-87
Query Start/End: Original strand, 102 - 340
Target Start/End: Complemental strand, 6487239 - 6487003
Alignment:
Q  102 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggttt 201  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  6487239 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataaattgagggttagggttt 6487140  T
Q  202 gatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcataa 301  Q
    |||||||||| || |||| |||||||| | |||||||||||||||||||||  ||||||| ||||||||||||||||||||  ||||| |||||||||||    
T  6487139 gatgatgattttg-aggggaatgggtattgatcatgttaattctgttgtaacgtaatgtttagaatgaaaacttaatctatactgttgttgtgatcataa 6487041  T
Q  302 attgattgagaattatgagcgattggatgaattgatgaa 340  Q
    ||||||||| ||||||||  ||| |||||||||||||||    
T  6487040 attgattga-aattatgattgatgggatgaattgatgaa 6487003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 91 - 298
Target Start/End: Complemental strand, 26583892 - 26583687
Alignment:
Q  91 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgag 190  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||    
T  26583892 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaa-ttgacctaattgcatagttttggaaaataaattgag 26583794  T
Q  191 ggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgc 290  Q
    |||||||| |||||||||||||||| |||||| ||||||| |||||||||| | ||||||||  | ||||||||||||||  | ||||||||  ||||||    
T  26583793 ggttagggcttgatgatgattctgaggggaaa-gggtaatgatcatgttaaatatgttgtaaagtgatgttcagaatgaattcctaatctataatgttgc 26583695  T
Q  291 tgtgatca 298  Q
    ||||||||    
T  26583694 tgtgatca 26583687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 104 - 340
Target Start/End: Original strand, 23089057 - 23089292
Alignment:
Q  104 aggtaagggtgagactatctctcgataatc-ataatctataatttctgaaaattgacctaattgcatagttttggaagataaa-ttgagggttagggttt 201  Q
    |||||||||||||||||||||||  ||||  ||||| | ||||||| |||||||||||||||||| ||   ||| | |||||| ||||||||||||||||    
T  23089057 aggtaagggtgagactatctctcattaatagataatatttaatttcggaaaattgacctaattgcttaaccttg-aggataaaattgagggttagggttt 23089155  T
Q  202 gatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcataa 301  Q
    |||||||||||| ||||| |||||||||| |||||||||||| ||||||||| | | |||| |||||||| ||||||||||  |||||||||||||||||    
T  23089156 gatgatgattct-aaggggaatgggtaatgatcatgttaattatgttgtaatgtgacgttcggaatgaaatcttaatctatactgttgctgtgatcataa 23089254  T
Q  302 attgattgagaattatgagcgattggatgaattgatgaa 340  Q
    ||||||||| || ||| |  |||||||||||||||||||    
T  23089255 attgattga-aaatataattgattggatgaattgatgaa 23089292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 104 - 340
Target Start/End: Complemental strand, 23879060 - 23878826
Alignment:
Q  104 aggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagat-aaattgagggttagggtttg 202  Q
    |||||||||||||||||||||||  |||| || || |||||||||  ||||||||||||||||| ||   ||| | ||| |||||||||||||||||| |    
T  23879060 aggtaagggtgagactatctctcattaataattatatataatttcgaaaaattgacctaattgcttaaccttg-aggattaaattgagggttagggtt-g 23878963  T
Q  203 atgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcataaa 302  Q
     |||||||||||| |||||  ||||||| |||||||||||| ||||||||| | ||||||||||||||| ||||||||||  ||||| ||||||||||||    
T  23878962 ttgatgattctgaggggaatggggtaatgatcatgttaattatgttgtaatgtgatgttcagaatgaaatcttaatctatactgttgttgtgatcataaa 23878863  T
Q  303 ttgattgagaattatgagcgattggatgaattgatgaa 340  Q
    |||||||| || ||  |  |||||||||||||||||||    
T  23878862 ttgattga-aaatagaattgattggatgaattgatgaa 23878826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 102 - 340
Target Start/End: Original strand, 23101463 - 23101700
Alignment:
Q  102 taaggtaagggtgagactatctctcgataatc-ataatctataatttctgaaaattgacctaattgcatagttttggaagataaa-ttgagggttagggt 199  Q
    |||||||||||||||||||||||||  ||||  ||||| | ||||||| |||||||||||||||||  ||   ||| | |||||| ||||||||||||||    
T  23101463 taaggtaagggtgagactatctctcattaatagataatatgtaatttcggaaaattgacctaattgtttaaccttg-aggataaaattgagggttagggt 23101561  T
Q  200 ttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcat 299  Q
    |||||||||||||||| ||||| |||||||| |||||||||||| ||||||||| | | |||| |||||||| ||||||||||  ||||| |||||||||    
T  23101562 ttgatgatgattctgaggggaa-tgggtaatgatcatgttaattatgttgtaatgtgacgttcggaatgaaatcttaatctatactgttgttgtgatcat 23101660  T
Q  300 aaattgattgagaattatgagcgattggatgaattgatgaa 340  Q
    ||||||||||| || ||| |  ||||||||||||| |||||    
T  23101661 aaattgattga-aaatataattgattggatgaattcatgaa 23101700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 101 - 215
Target Start/End: Original strand, 5706023 - 5706137
Alignment:
Q  101 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaat-tgagggttagggt 199  Q
    ||||||||||||||||||||||||||  |||||||||||||||||| |||||| |||||||||||| |||||||| ||| |  ||| |||   |||||||    
T  5706023 ctaaggtaagggtgagactatctctcattaatcataatctataattcctgaaa-ttgacctaattgaatagtttttgaaaaataatatgaaaattagggt 5706121  T
Q  200 ttgatgatgattctga 215  Q
    ||||||||||||||||    
T  5706122 ttgatgatgattctga 5706137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 65 - 116
Target Start/End: Original strand, 6260135 - 6260186
Alignment:
Q  65 taggaaccgattgtgctgtgtaatcattctgcaaaactaaggtaagggtgag 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6260135 taggaaccgattgtgctgtgtaatcattctgcaaaactaaggtaagggtgag 6260186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 102 - 166
Target Start/End: Complemental strand, 23265197 - 23265133
Alignment:
Q  102 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattg 166  Q
    ||||||||||||||||||||||||| ||||||||| | ||||||||||||||||||| |||||||    
T  23265197 taaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattg 23265133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 102 - 166
Target Start/End: Complemental strand, 23280265 - 23280201
Alignment:
Q  102 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattg 166  Q
    ||||||||||||||||||||||||| ||||||||| | ||||||||||||||||||| |||||||    
T  23280265 taaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattg 23280201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 102 - 163
Target Start/End: Complemental strand, 21908414 - 21908353
Alignment:
Q  102 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaa 163  Q
    ||||||||||||||||||||||||| |||||||| || ||||||||||||||||||| ||||    
T  21908414 taaggtaagggtgagactatctctcaataatcatgatatataatttctgaaaattgatctaa 21908353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 65 - 109
Target Start/End: Original strand, 19665037 - 19665081
Alignment:
Q  65 taggaaccgattgtgctgtgtaatcattctgcaaaactaaggtaa 109  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  19665037 taggaaccgattgtgctgtgtaatcattctgcaaaactaaggtaa 19665081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 102 - 158
Target Start/End: Complemental strand, 24661632 - 24661576
Alignment:
Q  102 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattga 158  Q
    ||||||||||||||| ||| |||||||| |||||||| |||||||||||||||||||    
T  24661632 taaggtaagggtgaggctaactctcgatgatcataatatataatttctgaaaattga 24661576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 101 - 156
Target Start/End: Complemental strand, 10632 - 10577
Alignment:
Q  101 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 156  Q
    |||||||||||||| || ||||| || ||| ||||||| |||||||||||||||||    
T  10632 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 10577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 91 - 282
Target Start/End: Original strand, 23168288 - 23168483
Alignment:
Q  91 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctg-aaaattgacctaattgcatagttttggaagat----aaa 185  Q
    ||||||||  |||||||||||||| || ||||| ||  | |||||||| ||||||||||| |||||| | ||||| | |||||||| ||||||    |||    
T  23168288 ttctgcaattctaaggtaagggtgggattatctttcattgatcataatgtataatttctgaaaaattaatctaatagaatagtttt-gaagataaaaaaa 23168386  T
Q  186 ttgagggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctat 282  Q
    |||||  ||||||| ||||| ||||| |||| | ||| | |||| | ||||||| | | ||||||||| | |||||||| ||||   ||||||||||    
T  23168387 ttgagaattagggtatgatgctgattttgaaagaaaaggtgtaagagtcatgtttaatgtgttgtaatttgatgttcagtatgatttcttaatctat 23168483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 91 - 282
Target Start/End: Original strand, 23579545 - 23579740
Alignment:
Q  91 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctg-aaaattgacctaattgcatagttttggaagat----aaa 185  Q
    ||||||||  |||||||||||||| || ||||| ||  | |||||||| ||||||||||| |||||| | ||||| | |||||||| ||||||    |||    
T  23579545 ttctgcaattctaaggtaagggtgggattatctttcattgatcataatgtataatttctgaaaaattaatctaatagaatagtttt-gaagataaaaaaa 23579643  T
Q  186 ttgagggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctat 282  Q
    |||||  ||||||| ||||| ||||| |||| | ||| | |||| | ||||||| | | ||||||||| | |||||||| ||||   ||||||||||    
T  23579644 ttgagaattagggtatgatgctgattttgaaagaaaaggtgtaagagtcatgtttaatgtgttgtaatttgatgttcagtatgatttcttaatctat 23579740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 101 - 156
Target Start/End: Original strand, 25180929 - 25180984
Alignment:
Q  101 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 156  Q
    |||||||||||||| || ||||| || ||| ||||||| |||||||||||||||||    
T  25180929 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 25180984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 173
Target Start/End: Complemental strand, 26885246 - 26885166
Alignment:
Q  92 tctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagtt 173  Q
    |||||||  |||||||||||||| || ||||| || |||||| |||| ||||||||||||||||| | ||||| | ||||||    
T  26885246 tctgcaattctaaggtaagggtgggattatctttcaataatc-taatgtataatttctgaaaattaatctaatggaatagtt 26885166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 179; Significance: 1e-96; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 104 - 341
Target Start/End: Original strand, 14398 - 14635
Alignment:
Q  104 aggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagtttt-ggaagataaattgagggttagggtttg 202  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  14398 aggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgagggttagggtttg 14497  T
Q  203 atgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcataaa 302  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||| | |||||| |||||||||||||||||||| ||||||||||||||||||    
T  14498 atgatgattctgaagggaaatgggtaatgatcatgttaattctgttgtaatgtgatgttccgaatgaaaacttaatctatgctgttgctgtgatcataaa 14597  T
Q  303 ttgattgagaattatgagcgattggatgaattgatgaat 341  Q
     ||||||| || |||||  |||||||| |||||||||||    
T  14598 ctgattga-aaatatgattgattggataaattgatgaat 14635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 174; Significance: 1e-93; HSPs: 17)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 104 - 348
Target Start/End: Original strand, 8727735 - 8727979
Alignment:
Q  104 aggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagtttt-ggaagataaattgagggttagggtttg 202  Q
    |||||||||||||| |||| ||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  8727735 aggtaagggtgagattatccctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgagggttagggtttg 8727834  T
Q  203 atgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcataaa 302  Q
    | ||||||||||| ||| | |||||| | |||||||||||||||||||||| ||||||||||||||||||||||||||||  ||||| ||||||||||||    
T  8727835 acgatgattctgaggggta-tgggtattgatcatgttaattctgttgtaatgtaatgttcagaatgaaaacttaatctatactgttgttgtgatcataaa 8727933  T
Q  303 ttgattgagaattatgagcgattggatgaattgatgaatttgtgta 348  Q
    |||||||| ||||||||| |||||||||||||||||||||||||||    
T  8727934 ttgattgaaaattatgagtgattggatgaattgatgaatttgtgta 8727979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 168; E-Value: 5e-90
Query Start/End: Original strand, 101 - 340
Target Start/End: Complemental strand, 44477678 - 44477441
Alignment:
Q  101 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggtt 200  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  44477678 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataaattgagggttagggtt 44477579  T
Q  201 tgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcata 300  Q
    ||||||||||| || |||| |||||||| | |||||||||||||||||||||  ||||||| ||||||||||||||||||||  ||||| ||||||||||    
T  44477578 tgatgatgattttg-aggggaatgggtattgatcatgttaattctgttgtaacgtaatgtttagaatgaaaacttaatctatactgttgttgtgatcata 44477480  T
Q  301 aattgattgagaattatgagcgattggatgaattgatgaa 340  Q
    |||||||||| ||||||||  |||||||||||||||||||    
T  44477479 aattgattga-aattatgattgattggatgaattgatgaa 44477441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 168; E-Value: 5e-90
Query Start/End: Original strand, 101 - 340
Target Start/End: Complemental strand, 44492836 - 44492599
Alignment:
Q  101 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggtt 200  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  44492836 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataaattgagggttagggtt 44492737  T
Q  201 tgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcata 300  Q
    ||||||||||| || |||| |||||||| | |||||||||||||||||||||  ||||||| ||||||||||||||||||||  ||||| ||||||||||    
T  44492736 tgatgatgattttg-aggggaatgggtattgatcatgttaattctgttgtaacgtaatgtttagaatgaaaacttaatctatactgttgttgtgatcata 44492638  T
Q  301 aattgattgagaattatgagcgattggatgaattgatgaa 340  Q
    |||||||||| ||||||||  |||||||||||||||||||    
T  44492637 aattgattga-aattatgattgattggatgaattgatgaa 44492599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 91 - 348
Target Start/End: Complemental strand, 23866680 - 23866423
Alignment:
Q  91 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgag 190  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||| ||||||||||||||||||||||||| ||||||||||    
T  23866680 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatttataattcctgaaa-ttgacctaattgcatagttttggaaaataaattgag 23866582  T
Q  191 ggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattct-gttgtaatataatgttcagaatgaaaacttaatctatgttgttg 289  Q
    ||||||||||||||||||||| ||||| |||||||||||| ||||||||||||||  |||||||||||||||||||||  ||||||||||| ||||||||    
T  23866581 ggttagggtttgatgatgattatgaagagaaatgggtaatgatcatgttaattctatttgtaatataatgttcagaatataaacttaatct-tgttgttg 23866483  T
Q  290 ctgtgatcataaattgattgagaa-ttatgagcgattggatgaattgatgaatttgtgta 348  Q
    || ||||| |||| |||||  ||| ||||||| |||||||||||||||||||||||||||    
T  23866482 ctctgatcgtaaactgatttggaatttatgagtgattggatgaattgatgaatttgtgta 23866423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 65 - 340
Target Start/End: Original strand, 27940815 - 27941091
Alignment:
Q  65 taggaaccgattgtgctgtgtaatcattctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaat 164  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |  || || || ||||| ||| ||||||||||||||    | |    
T  27940815 taggaaccgattgtgctgtgtaatcattctgcaaaactaaggtaagggtgaggctaaccttcaatgattataatatatgatttctgaaaattgtttgatt 27940914  T
Q  165 tgcatagtt-ttggaagataa--attgagggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgtt 261  Q
     | || ||| ||| || ||||  |||| |  ||||||||||||||||||||||| ||||| |||||| | |||||||||||||||||||||| |||||||    
T  27940915 agaattgttcttgaaaaataagaattgggaattagggtttgatgatgattctgaggggaa-tgggtattgatcatgttaattctgttgtaatgtaatgtt 27941013  T
Q  262 cagaatgaaaacttaatctatgttgttgctgtgatcataaattgattgagaattatgagcgattggatgaattgatgaa 340  Q
    ||||||||||| |||||||||  ||||| | |||||||||||||||||| ||||||||  |||||||||||||||||||    
T  27941014 cagaatgaaaatttaatctatactgttgttatgatcataaattgattga-aattatgattgattggatgaattgatgaa 27941091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 91 - 310
Target Start/End: Complemental strand, 17054656 - 17054440
Alignment:
Q  91 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgag 190  Q
    ||||||||||| |||||||||||||||||||||||| ||||||||||||||||||| ||| ||||||||||||||| |||||||||||| ||||  |||     
T  17054656 ttctgcaaaaccaaggtaagggtgagactatctctcaataatcataatctataattcctg-aaattgacctaattgaatagttttggaaaataagatgaa 17054558  T
Q  191 ggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgc 290  Q
     |||||||||||||||||||||||| ||  |||| ||||  || |||||| || | ||| ||| ||||||| |||| |||| ||||||| ||||||||||    
T  17054557 agttagggtttgatgatgattctgatgg--aatgagtaaagatgatgttagtt-tcttggaatttaatgttaagaacgaaatcttaatccatgttgttgc 17054461  T
Q  291 tgtgat-cataaattgattga 310  Q
    ||| || ||| ||||||||||    
T  17054460 tgtaatccatgaattgattga 17054440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 102 - 211
Target Start/End: Complemental strand, 18614327 - 18614217
Alignment:
Q  102 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagat-aaattgagggttagggtt 200  Q
    ||||||||||||||||||||||||| |||||||| || ||||||||||||||||||| | ||||| || ||| | |||||| ||||||||  ||||||||    
T  18614327 taaggtaagggtgagactatctctcaataatcatgatatataatttctgaaaattgatccaattgaattgttcttgaagataaaattgagaattagggtt 18614228  T
Q  201 tgatgatgatt 211  Q
    | ||| |||||    
T  18614227 ttatgctgatt 18614217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 65 - 157
Target Start/End: Original strand, 14056527 - 14056619
Alignment:
Q  65 taggaaccgattgtgctgtgtaatcattctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattg 157  Q
    |||||||||||| || |||| |||| ||||||||| |||||||||||||||||||||||||| ||||| ||| | | ||| ||||||||||||    
T  14056527 taggaaccgattttgttgtgcaatctttctgcaaatctaaggtaagggtgagactatctctcaataataatagtatgtaaattctgaaaattg 14056619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 102 - 166
Target Start/End: Original strand, 23482053 - 23482117
Alignment:
Q  102 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattg 166  Q
    ||||||||||||||||||||||||| ||||||||| | ||||||||||||||||||| |||||||    
T  23482053 taaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattg 23482117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 69 - 157
Target Start/End: Complemental strand, 25112064 - 25111976
Alignment:
Q  69 aaccgattgtgctgtgtaatcattctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattg 157  Q
    |||||||| || |||| |||| |||| |||| |||||||||||||||||||||||||| ||||| ||| | | ||| ||||||||||||    
T  25112064 aaccgattttgttgtgcaatctttctacaaatctaaggtaagggtgagactatctctcaataataatagtatgtaaattctgaaaattg 25111976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 65 - 117
Target Start/End: Original strand, 30765873 - 30765925
Alignment:
Q  65 taggaaccgattgtgctgtgtaatcattctgcaaaactaaggtaagggtgaga 117  Q
    ||||||||||||||||||| | ||| |||||||||||||||||||||||||||    
T  30765873 taggaaccgattgtgctgttttatctttctgcaaaactaaggtaagggtgaga 30765925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 102 - 158
Target Start/End: Complemental strand, 39364975 - 39364919
Alignment:
Q  102 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattga 158  Q
    ||||||||||||||||||||||||| ||||| ||| | || ||||||||||||||||    
T  39364975 taaggtaagggtgagactatctctcaataataatagtatagaatttctgaaaattga 39364919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 102 - 156
Target Start/End: Original strand, 29643386 - 29643440
Alignment:
Q  102 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 156  Q
    |||||||||||||||| ||||| || ||||||||||| | |||||||||||||||    
T  29643386 taaggtaagggtgagattatctttcaataatcataatatgtaatttctgaaaatt 29643440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 101 - 156
Target Start/End: Original strand, 24320670 - 24320725
Alignment:
Q  101 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 156  Q
    |||||||||||||| || ||||| || ||| ||||||| |||||||||||||||||    
T  24320670 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 24320725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 126
Target Start/End: Original strand, 21325730 - 21325791
Alignment:
Q  66 aggaaccgattgtgctgtgtaat-cattctgcaaaactaaggtaagggtgagactatctctc 126  Q
    ||||||||||| ||||||| ||| | ||||||||| |||||||||||||||| ||| |||||    
T  21325730 aggaaccgattttgctgtgcaattctttctgcaaatctaaggtaagggtgaggctaactctc 21325791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 66 - 125
Target Start/End: Original strand, 21321132 - 21321192
Alignment:
Q  66 aggaaccgattgtgctgtgtaat-cattctgcaaaactaaggtaagggtgagactatctct 125  Q
    ||||||||||| ||||||| ||| | ||||||||| |||||||||||| ||||||| ||||    
T  21321132 aggaaccgattttgctgtgcaattctttctgcaaatctaaggtaagggcgagactaactct 21321192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 102 - 158
Target Start/End: Complemental strand, 21931752 - 21931696
Alignment:
Q  102 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattga 158  Q
    ||||||||||||||| ||| ||||| || || ||||| ||||| |||||||||||||    
T  21931752 taaggtaagggtgaggctaactctcaatgattataatatataacttctgaaaattga 21931696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 173; Significance: 6e-93; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 173; E-Value: 6e-93
Query Start/End: Original strand, 65 - 340
Target Start/End: Complemental strand, 11433 - 11159
Alignment:
Q  65 taggaaccgattgtgctgtgtaatcattctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaat 164  Q
    |||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  11433 taggaaccgattttgctgtgtaatccttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaat 11334  T
Q  165 tgcatagttttggaagata-aattgagggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttca 263  Q
    ||| ||||||||||| ||| ||||||||||||||||||||||||||||||| |||| |||| ||||| |||||||||||||||||||||| | |||||||    
T  11333 tgcttagttttggaaaatagaattgagggttagggtttgatgatgattctggaggg-aatgagtaatgatcatgttaattctgttgtaatgtgatgttca 11235  T
Q  264 gaatgaaaacttaatctatgttgttgctgtgatcataaattgattgagaattatgagcgattggatgaattgatgaa 340  Q
     ||||||| ||||||| ||  |||||||||||||| ||||||||||| || ||| |  |||||||||||||||||||    
T  11234 aaatgaaatcttaatccatactgttgctgtgatcacaaattgattga-aaatataattgattggatgaattgatgaa 11159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 172; Significance: 2e-92; HSPs: 12)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 102 - 340
Target Start/End: Original strand, 20437024 - 20437261
Alignment:
Q  102 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatag-ttttggaagataaattgagggttagggtt 200  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  20437024 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgagggttagggtt 20437123  T
Q  201 tgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcata 300  Q
    |||||||||||||| |||| |||||||| | |||||||||||| ||||||||| ||||||||||||||||||||||||||||  ||||| ||||||||||    
T  20437124 tgatgatgattctg-aggggaatgggtattgatcatgttaattatgttgtaatgtaatgttcagaatgaaaacttaatctatactgttgttgtgatcata 20437222  T
Q  301 aattgattgagaattatgagcgattggatgaattgatgaa 340  Q
    |||||||||| ||||||||  |||||||||||||||||||    
T  20437223 aattgattga-aattatgattgattggatgaattgatgaa 20437261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 91 - 310
Target Start/End: Complemental strand, 41112100 - 41111884
Alignment:
Q  91 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgag 190  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| ||||||||| || ||||  |||     
T  41112100 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttgaaaaataagatgaa 41112002  T
Q  191 ggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgc 290  Q
     |||||||||||||||||||||||| ||  |||| ||||  |   ||||| || | ||| ||| ||||||| |||| |||| ||||||| ||||||||||    
T  41112001 agttagggtttgatgatgattctgatgg--aatgagtaaagacggtgttagtt-tcttggaatttaatgttaagaacgaaatcttaatccatgttgttgc 41111905  T
Q  291 tgtgat-cataaattgattga 310  Q
    ||| || ||| ||||||||||    
T  41111904 tgtaatccatgaattgattga 41111884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 102 - 166
Target Start/End: Complemental strand, 32651627 - 32651563
Alignment:
Q  102 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattg 166  Q
    ||||||||||||||||||||||||| ||||||||| | ||||||||||||||||||| |||||||    
T  32651627 taaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattg 32651563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 102 - 157
Target Start/End: Original strand, 19663517 - 19663572
Alignment:
Q  102 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattg 157  Q
    ||||||||||||||||||||||||||||||||||| | ||||||||||||||||||    
T  19663517 taaggtaagggtgagactatctctcgataatcatagtatataatttctgaaaattg 19663572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 102 - 166
Target Start/End: Complemental strand, 18712854 - 18712790
Alignment:
Q  102 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattg 166  Q
    ||||||| ||||||||||||||||| ||||||||| | ||||||||||||||||||| |||||||    
T  18712854 taaggtatgggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattg 18712790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 102 - 158
Target Start/End: Complemental strand, 20805376 - 20805320
Alignment:
Q  102 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattga 158  Q
    ||||||||||||||| ||| ||||| || |||||||| |||||||||||||||||||    
T  20805376 taaggtaagggtgaggctaactctcaatgatcataatatataatttctgaaaattga 20805320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 102 - 157
Target Start/End: Complemental strand, 11158148 - 11158093
Alignment:
Q  102 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattg 157  Q
    ||||||||||||||||||| ||||| || ||| |||| ||||||||||||||||||    
T  11158148 taaggtaagggtgagactaactctcaatgatcttaatatataatttctgaaaattg 11158093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 104 - 158
Target Start/End: Original strand, 10811785 - 10811839
Alignment:
Q  104 aggtaagggtgagactatctctcgataatcataatctataatttctgaaaattga 158  Q
    ||||||||||||||||||||||| ||||| ||| | || ||||||||||||||||    
T  10811785 aggtaagggtgagactatctctcaataataatagtgtagaatttctgaaaattga 10811839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 101 - 156
Target Start/End: Original strand, 20851132 - 20851187
Alignment:
Q  101 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 156  Q
    |||||||||||||| || ||||| || ||| ||||||| |||||||||||||||||    
T  20851132 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 20851187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 101 - 156
Target Start/End: Original strand, 20857759 - 20857814
Alignment:
Q  101 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 156  Q
    |||||||||||||| || ||||| || ||| ||||||| |||||||||||||||||    
T  20857759 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 20857814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 101 - 156
Target Start/End: Complemental strand, 21706331 - 21706276
Alignment:
Q  101 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 156  Q
    |||||||||||||| || ||||| || ||| ||||||| |||||||||||||||||    
T  21706331 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 21706276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 101 - 156
Target Start/End: Complemental strand, 21710873 - 21710818
Alignment:
Q  101 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 156  Q
    |||||||||||||| || ||||| || ||| ||||||| |||||||||||||||||    
T  21710873 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 21710818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0553 (Bit Score: 165; Significance: 3e-88; HSPs: 1)
Name: scaffold0553
Description:

Target: scaffold0553; HSP #1
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 101 - 340
Target Start/End: Original strand, 10195 - 10433
Alignment:
Q  101 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatag-ttttggaagataaattgagggttagggt 199  Q
    |||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||    
T  10195 ctaaggtaagggtgggactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgtgggttagggt 10294  T
Q  200 ttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcat 299  Q
    ||||||||||||||| |||| |||||||| | |||||||||||||||||||||| ||||||| ||||||||||||||||||||  ||||| |||||||||    
T  10295 ttgatgatgattctg-aggggaatgggtattgatcatgttaattctgttgtaatgtaatgtttagaatgaaaacttaatctatactgttgttgtgatcat 10393  T
Q  300 aaattgattgagaattatgagcgattggatgaattgatgaa 340  Q
    ||||||||||| ||||||||  |||||||||||||||||||    
T  10394 aaattgattga-aattatgattgattggatgaattgatgaa 10433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0544 (Bit Score: 165; Significance: 3e-88; HSPs: 1)
Name: scaffold0544
Description:

Target: scaffold0544; HSP #1
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 101 - 340
Target Start/End: Original strand, 1525 - 1763
Alignment:
Q  101 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatag-ttttggaagataaattgagggttagggt 199  Q
    |||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||    
T  1525 ctaaggtaagggtgggactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgtgggttagggt 1624  T
Q  200 ttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcat 299  Q
    ||||||||||||||| |||| |||||||| | |||||||||||||||||||||| ||||||| ||||||||||||||||||||  ||||| |||||||||    
T  1625 ttgatgatgattctg-aggggaatgggtattgatcatgttaattctgttgtaatgtaatgtttagaatgaaaacttaatctatactgttgttgtgatcat 1723  T
Q  300 aaattgattgagaattatgagcgattggatgaattgatgaa 340  Q
    ||||||||||| ||||||||  |||||||||||||||||||    
T  1724 aaattgattga-aattatgattgattggatgaattgatgaa 1763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 160; Significance: 3e-85; HSPs: 2)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 91 - 348
Target Start/End: Original strand, 1887 - 2143
Alignment:
Q  91 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaa-ttgacctaattgcatagttttggaagataaattga 189  Q
    ||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||| |||||||||||| |||||||||||| |||| ||||    
T  1887 ttctgcaaaactaaggtaagggtgagactatatctcaataatcataatctataatttctgaaaaattgacctaattgtatagttttggaaaataatttga 1986  T
Q  190 gggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttg 289  Q
    |||||||||||||||||||||| ||| ||  |||||||||| || ||||||||||| ||||||| ||||||||| |||||||||||||||  ||||||||    
T  1987 gggttagggtttgatgatgattttgatgg--aatgggtaatgattatgttaattctcttgtaatttaatgttcataatgaaaacttaatccttgttgttg 2084  T
Q  290 ctgtgatcataaattgattgagaattatgagcgattggatgaattgatgaatttgtgta 348  Q
    |||||||||||| |||||||| | | ||||| ||||| |||||||||||||||||||||    
T  2085 ctgtgatcataacttgattgaaattgatgagtgattgtatgaattgatgaatttgtgta 2143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117; HSP #2
Raw Score: 156; E-Value: 8e-83
Query Start/End: Original strand, 91 - 348
Target Start/End: Original strand, 8564 - 8820
Alignment:
Q  91 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaa-ttgacctaattgcatagttttggaagataaattga 189  Q
    ||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||| |||||||||||| |||||||||||| |||| ||||    
T  8564 ttctgcaaaactaaggtaagggtgagactatatctcaataatcataatctataatttctgaaaaattgacctaattgtatagttttggaaaataatttga 8663  T
Q  190 gggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttg 289  Q
    |||||||||||||||||||||| ||| ||  |||||||||| || ||||||||||| ||||||| ||||||||| |||||||||||||||  ||||||||    
T  8664 gggttagggtttgatgatgattatgatgg--aatgggtaatgattatgttaattctcttgtaatttaatgttcaaaatgaaaacttaatccttgttgttg 8761  T
Q  290 ctgtgatcataaattgattgagaattatgagcgattggatgaattgatgaatttgtgta 348  Q
    |||||||||||| |||||||| | | || || ||||| |||||||||||||||||||||    
T  8762 ctgtgatcataacttgattgaaattgataagtgattgtatgaattgatgaatttgtgta 8820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 159; Significance: 1e-84; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 65 - 341
Target Start/End: Complemental strand, 18261 - 17985
Alignment:
Q  65 taggaaccgattgtgctgtgtaatcattctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaat 164  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||    
T  18261 taggaaccgattgtgttgtgtaatcattctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttttgaaaattgacctaat 18162  T
Q  165 tgcatag-ttttggaagataaattgagggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctg-ttgtaatataatgttc 262  Q
    ||| ||| ||| |||| ||||||||||||||| ||||| ||||||||||| | ||||||| ||||||  |||||||||||||| ||||||| | |||| |    
T  18161 tgcttagctttaggaaaataaattgagggttaaggtttaatgatgattctaacgggaaat-ggtaatggtcatgttaattctgtttgtaatgtgatgtcc 18063  T
Q  263 agaatgaaaacttaatctatgttgttgctgtgatcataaattgattgagaattatgagcgattggatgaattgatgaat 341  Q
    ||||||||||||||| ||||||||||||||||||||| |||||||||| ||||  ||  |||||||| |||||||||||    
T  18062 agaatgaaaacttaacctatgttgttgctgtgatcatgaattgattga-aatttggattgattggataaattgatgaat 17985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 151; Significance: 7e-80; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 151; E-Value: 7e-80
Query Start/End: Original strand, 91 - 341
Target Start/End: Complemental strand, 356 - 109
Alignment:
Q  91 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgag 190  Q
    |||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||    
T  356 ttctgcaaaactaaggtaagggtgagactatctctcaataaccataatctataatttctgaaa-ttgacctaattgcatagttttggaaaataaattgag 258  T
Q  191 ggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgc 290  Q
    |||||||||||||||||||||||| |||| |||||||||| |||||||||||| | ||||| |||  |||||||| |||| |||||||||||||| |||     
T  257 ggttagggtttgatgatgattctg-aggggaatgggtaatgatcatgttaattttcttgtattatggtgttcagattgaagacttaatctatgttattga 159  T
Q  291 tgtgatcataaattgattgagaattatgagcgattggatgaattgatgaat 341  Q
    ||||||||||||||| |||| ||||||||  | |||||| |||||||||||    
T  158 tgtgatcataaattggttga-aattatgattggttggataaattgatgaat 109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 127; Significance: 2e-65; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 65 - 298
Target Start/End: Complemental strand, 30949 - 30715
Alignment:
Q  65 taggaaccgattgtgctgtgtaatcattctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaat 164  Q
    |||||| ||||| |||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  30949 taggaatcgattttgctgtgtaatccttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaat 30850  T
Q  165 tgcatagttttggaagat-aaattgagggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttca 263  Q
    |||||||||||||||| | ||||||||| ||||||||||||||||||| ||| |||||  | ||||  |||||||||| | ||||||||  | |||| ||    
T  30849 tgcatagttttggaaggtaaaattgaggattagggtttgatgatgattttgaggggaatggtgtaacgatcatgttaaatatgttgtaaagtgatgtgca 30750  T
Q  264 gaatgaaaacttaatctatgttgttgctgtgatca 298  Q
    |||||||  | ||||||||  ||||| ||||||||    
T  30749 gaatgaattcctaatctataatgttgatgtgatca 30715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476 (Bit Score: 100; Significance: 2e-49; HSPs: 1)
Name: scaffold0476
Description:

Target: scaffold0476; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 104 - 340
Target Start/End: Original strand, 3295 - 3531
Alignment:
Q  104 aggtaagggtgagactatctctcgataatc-ataatctataatttctgaaaattgacctaattgcatagttttggaagataaa-ttgagggttagggttt 201  Q
    |||||||||||||||||||||||  ||||  ||||| | ||||||| |||||||||||||||||| ||   ||||  |||||| ||||||||||||||||    
T  3295 aggtaagggtgagactatctctcattaatagataatatgtaatttcggaaaattgacctaattgcttaaccttggg-gataaaattgagggttagggttt 3393  T
Q  202 gatgatgattctgaagggaaatgggtaat-aatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcata 300  Q
    |||||||||||||| ||||| |||||||| ||||||||||||| ||||||||| | ||||||||||||||| ||||||||||  |||||||||||||| |    
T  3394 gatgatgattctgaggggaa-tgggtaatgaatcatgttaattttgttgtaatgtgatgttcagaatgaaatcttaatctatactgttgctgtgatcaca 3492  T
Q  301 aattgattgagaattatgagcgattggatgaattgatgaa 340  Q
    |||||||||| || ||| |  |||||||||||||||||||    
T  3493 aattgattga-aaatataattgattggatgaattgatgaa 3531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 95; Significance: 2e-46; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 104 - 340
Target Start/End: Original strand, 3624 - 3859
Alignment:
Q  104 aggtaagggtgagactatctctcgataatc-ataatctataatttctgaaaattgacctaattgcatagttttggaagataaa-ttgagggttagggttt 201  Q
    |||||||||||||||||||||||  ||||  ||||| | ||||||| |||||||||||||||||| ||   ||| | |||||| ||||||||||||||||    
T  3624 aggtaagggtgagactatctctcattaatagataatatgtaatttcggaaaattgacctaattgcttaaccttg-aggataaaattgagggttagggttt 3722  T
Q  202 gatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcataa 301  Q
    |||||||||||||| ||| | |||||||| |||||||||||| ||||||||| | |||||| |||||||| ||||||||||  ||||| |||||||||||    
T  3723 gatgatgattctgaggggga-tgggtaatgatcatgttaattatgttgtaatgtgatgttcggaatgaaatcttaatctatactgttgttgtgatcataa 3821  T
Q  302 attgattgagaattatgagcgattggatgaattgatgaa 340  Q
    ||||||||| || ||| |  |||||||||||||||||||    
T  3822 attgattga-aaatataattgattggatgaattgatgaa 3859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0796 (Bit Score: 86; Significance: 5e-41; HSPs: 2)
Name: scaffold0796
Description:

Target: scaffold0796; HSP #1
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 96 - 292
Target Start/End: Original strand, 1727 - 1920
Alignment:
Q  96 caaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggtta 195  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||| ||| ||||||||||||||| |||||||||||| ||||  |||  ||||    
T  1727 caaaactaaggtaagggtgagactatctctcaataatcataatctataattcctg-aaattgacctaattgaatagttttggaaaataatatgaaagtta 1825  T
Q  196 gggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctg 292  Q
    |||||||||||||||||||| ||  |||| ||||  || |||||| || | | | ||| ||||||| ||||||||| ||||||| ||| ||||||||    
T  1826 gggtttgatgatgattctgatgg--aatgagtaaggatgatgttagttttctcggaatttaatgttaagaatgaaagcttaatccatgctgttgctg 1920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0796; HSP #2
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 96 - 292
Target Start/End: Original strand, 5750 - 5943
Alignment:
Q  96 caaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggtta 195  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||| ||| ||||||||||||||| |||||||||||| ||||  |||  ||||    
T  5750 caaaactaaggtaagggtgagactatctctcaataatcataatctataattcctg-aaattgacctaattgaatagttttggaaaataatatgaaagtta 5848  T
Q  196 gggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctg 292  Q
    |||||||||||||||||||| ||  |||| ||||  || |||||| || | | | ||| ||||||| ||||||||| ||||||| ||| ||||||||    
T  5849 gggtttgatgatgattctgatgg--aatgagtaaggatgatgttagttttctcggaatttaatgttaagaatgaaagcttaatccatgctgttgctg 5943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456 (Bit Score: 76; Significance: 4e-35; HSPs: 4)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 97 - 184
Target Start/End: Complemental strand, 991 - 904
Alignment:
Q  97 aaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataa 184  Q
    |||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||| |||||||||||    
T  991 aaaactaaggtaagggtgagactatctctcaataatcataatctatagtttctgaaaattgacctaattgcatagtcttggaagataa 904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456; HSP #2
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 97 - 184
Target Start/End: Complemental strand, 8136 - 8049
Alignment:
Q  97 aaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataa 184  Q
    |||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||| |||||||||||    
T  8136 aaaactaaggtaagggtgagactatctctcaataatcataatctatagtttctgaaaattgacctaattgcatagtcttggaagataa 8049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456; HSP #3
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 245 - 341
Target Start/End: Complemental strand, 901 - 806
Alignment:
Q  245 tgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcataaattgattgagaattatgagcgattggatgaattgatgaat 341  Q
    ||||||||| | |||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||| |||||||| |||||||||||    
T  901 tgttgtaatgtgatgttcagaatgaaaacttaatctgtgttgttgctgtgatcataaattgattg-gaattatgagggattggataaattgatgaat 806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456; HSP #4
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 245 - 341
Target Start/End: Complemental strand, 8046 - 7951
Alignment:
Q  245 tgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcataaattgattgagaattatgagcgattggatgaattgatgaat 341  Q
    ||||||||| | |||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||| |||||||| |||||||||||    
T  8046 tgttgtaatgtgatgttcagaatgaaaacttaatctgtgttgttgctgtgatcataaattgattg-gaattatgagggattggataaattgatgaat 7951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0634 (Bit Score: 68; Significance: 3e-30; HSPs: 1)
Name: scaffold0634
Description:

Target: scaffold0634; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 261 - 348
Target Start/End: Complemental strand, 3558 - 3471
Alignment:
Q  261 tcagaatgaaaacttaatctatgttgttgctgtgatcataaattgattgagaattatgagcgattggatgaattgatgaatttgtgta 348  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||| | ||||| | |||||||||||||||||||||||||||    
T  3558 tcagaatgaaaacttaatctttgttgttgctgtgatcataaattgattgaaatttatgggtgattggatgaattgatgaatttgtgta 3471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 65 - 157
Target Start/End: Original strand, 40495 - 40587
Alignment:
Q  65 taggaaccgattgtgctgtgtaatcattctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattg 157  Q
    |||||||||||| ||||||| |||| ||||||||| |||||||||||||||||||||||||| ||||||||| | ||||||||||||||||||    
T  40495 taggaaccgattttgctgtgcaatctttctgcaaatctaaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattg 40587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 95 - 213
Target Start/End: Original strand, 45268 - 45386
Alignment:
Q  95 gcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaat-tgagggt 193  Q
    ||||| |||||||||||||||||||||||||| ||||||||||||||||||| |||||| |||||||||||| |||||||| ||| |  ||| |||   |    
T  45268 gcaaatctaaggtaagggtgagactatctctcaataatcataatctataattcctgaaa-ttgacctaattgaatagtttttgaaaaataatatgaaaat 45366  T
Q  194 tagggtttgatgatgattct 213  Q
    ||||||||||||||||||||    
T  45367 tagggtttgatgatgattct 45386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 68 - 157
Target Start/End: Complemental strand, 135562 - 135473
Alignment:
Q  68 gaaccgattgtgctgtgtaatcattctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattg 157  Q
    ||||||||| ||||||| |||| ||||| ||| |||||||||||||||||||||||||| ||||||||| | ||||||||||||||||||    
T  135562 gaaccgattttgctgtgcaatctttctgaaaatctaaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattg 135473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 65 - 155
Target Start/End: Original strand, 22556 - 22646
Alignment:
Q  65 taggaaccgattgtgctgtgtaatcattctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaat 155  Q
    |||||||||||| ||||||| |||  ||||||||| | |||||||||||||||||||||||| ||||||||| | ||||||||||||||||    
T  22556 taggaaccgattttgctgtgcaatatttctgcaaatccaaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaat 22646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0310 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0310
Description:

Target: scaffold0310; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 78 - 157
Target Start/End: Complemental strand, 17723 - 17643
Alignment:
Q  78 tgctgtgtaatcattctgcaaaa-ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattg 157  Q
    ||||||| |||| |||||||||| |||||||||||||||||||||||||| |||| |||||| ||||||||||||||||||    
T  17723 tgctgtgcaatctttctgcaaaatctaaggtaagggtgagactatctctcaataaccataatgtataatttctgaaaattg 17643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222 (Bit Score: 49; Significance: 6e-19; HSPs: 1)
Name: scaffold0222
Description:

Target: scaffold0222; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 102 - 166
Target Start/End: Complemental strand, 16875 - 16811
Alignment:
Q  102 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattg 166  Q
    ||||||||||||||||||||||||| ||||||||| | ||||||||||||||||||| |||||||    
T  16875 taaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattg 16811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 49; Significance: 6e-19; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 102 - 166
Target Start/End: Complemental strand, 116951 - 116887
Alignment:
Q  102 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattg 166  Q
    ||||||||||||||||||||||||| ||||||||| | ||||||||||||||||||| |||||||    
T  116951 taaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattg 116887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 102 - 157
Target Start/End: Original strand, 34276 - 34331
Alignment:
Q  102 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattg 157  Q
    ||||||||||||||||||||||||||||||||||| | ||||||||||||||||||    
T  34276 taaggtaagggtgagactatctctcgataatcatagtatataatttctgaaaattg 34331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0461 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0461
Description:

Target: scaffold0461; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 102 - 166
Target Start/End: Original strand, 8 - 72
Alignment:
Q  102 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattg 166  Q
    ||||||||||||||||||||||||| |||||| ||||  |||||||||||||||||| |||||||    
T  8 taaggtaagggtgagactatctctcaataatcttaatacataatttctgaaaattgatctaattg 72  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0249 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0249
Description:

Target: scaffold0249; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 65 - 109
Target Start/End: Original strand, 2212 - 2256
Alignment:
Q  65 taggaaccgattgtgctgtgtaatcattctgcaaaactaaggtaa 109  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  2212 taggaaccgattgtgctgtgtaatcattctgcaaaactaaggtaa 2256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 102 - 166
Target Start/End: Complemental strand, 13687 - 13623
Alignment:
Q  102 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattg 166  Q
    ||||||||||||||||||||||||| |||||| ||||  |||||||||||||||||| |||||||    
T  13687 taaggtaagggtgagactatctctcaataatcttaatacataatttctgaaaattgatctaattg 13623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 102 - 166
Target Start/End: Original strand, 101928 - 101992
Alignment:
Q  102 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattg 166  Q
    ||||||||||||||||||||||||| ||||||||| | ||||||| ||||||||||| |||||||    
T  101928 taaggtaagggtgagactatctctcaataatcatagtatataattcctgaaaattgatctaattg 101992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0815 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0815
Description:

Target: scaffold0815; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 91 - 153
Target Start/End: Complemental strand, 1515 - 1453
Alignment:
Q  91 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaa 153  Q
    |||||||||| ||||||||||||||||||| ||||| || ||| |||| ||||||||||||||    
T  1515 ttctgcaaaattaaggtaagggtgagactaactctcaatgatcttaatgtataatttctgaaa 1453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 91 - 291
Target Start/End: Original strand, 23559 - 23760
Alignment:
Q  91 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaaga-taaattga 189  Q
    ||||||||  |||||||||||||| || ||||| |  || |||||||| ||||||||||||||||| | ||||  | |||||| | |||||  |||||||    
T  23559 ttctgcaattctaaggtaagggtgggattatctttgaatgatcataatgtataatttctgaaaattaatctaaaagaatagttcttgaagacaaaattga 23658  T
Q  190 gggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttg 289  Q
    |  ||||||| ||||| ||||| |||| | |||   |||| ||||||||| | | ||||||||| | |||||||| ||||   ||||||||||  |||||    
T  23659 gaattagggtgtgatgctgattttgaaagaaaagatgtaagaatcatgtttaatgtgttgtaatttgatgttcagtatgatttcttaatctataatgttg 23758  T
Q  290 ct 291  Q
    ||    
T  23759 ct 23760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2054 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold2054
Description:

Target: scaffold2054; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 91 - 190
Target Start/End: Complemental strand, 780 - 680
Alignment:
Q  91 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctg-aaaattgacctaattgcatagttttggaagataaattga 189  Q
    |||||||||||||||||||||||| || ||||| || || ||| |||| ||||||||||| |||||| ||||||  | |||||| | ||| |||||||||    
T  780 ttctgcaaaactaaggtaagggtgggattatctttcaatgatcttaatatataatttctgaaaaattaacctaaaagaatagttcttgaaaataaattga 681  T
Q  190 g 190  Q
    |    
T  680 g 680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0609 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0609
Description:

Target: scaffold0609; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 101 - 185
Target Start/End: Original strand, 5857 - 5941
Alignment:
Q  101 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaa 185  Q
    |||||||||||||| || ||||| || || || ||||| ||||||||||||||||| | ||||||| |||||| | |||||||||    
T  5857 ctaaggtaagggtgggattatctttcaatgattataatatataatttctgaaaattaatctaattgaatagttcttgaagataaa 5941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0317 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0317
Description:

Target: scaffold0317; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 102 - 221
Target Start/End: Complemental strand, 1441 - 1321
Alignment:
Q  102 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagat-aaattgagggttagggtt 200  Q
    |||||||||||||||||||||| || || ||||| || |||||||| |||||||||| ||||||  || ||| | || ||| ||| ||||  ||||||||    
T  1441 taaggtaagggtgagactatctttcaatgatcatgatatataatttttgaaaattgatctaattaaattgttcttgatgataaaactgagaattagggtt 1342  T
Q  201 tgatgatgattctgaagggaa 221  Q
    ||||| ||||| |||| ||||    
T  1341 tgatgctgattttgaaaggaa 1321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 102 - 158
Target Start/End: Complemental strand, 12352 - 12296
Alignment:
Q  102 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattga 158  Q
    ||||||||||||||| ||| ||||| || |||||||| |||||||||||||||||||    
T  12352 taaggtaagggtgaggctaactctcaatgatcataatatataatttctgaaaattga 12296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 102 - 157
Target Start/End: Original strand, 14997 - 15052
Alignment:
Q  102 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattg 157  Q
    ||||||||||||||||||| ||||| || ||| |||| ||||||||||||||||||    
T  14997 taaggtaagggtgagactaactctcaatgatcttaatatataatttctgaaaattg 15052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0790 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0790
Description:

Target: scaffold0790; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 90 - 123
Target Start/End: Complemental strand, 5520 - 5487
Alignment:
Q  90 attctgcaaaactaaggtaagggtgagactatct 123  Q
    ||||||||||||||||||||||||||||||||||    
T  5520 attctgcaaaactaaggtaagggtgagactatct 5487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 92 - 173
Target Start/End: Original strand, 493019 - 493099
Alignment:
Q  92 tctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagtt 173  Q
    |||||||  ||||||||||||||||| ||||| || |||||| |||| ||||||||||||||||| | ||||| | ||||||    
T  493019 tctgcaattctaaggtaagggtgagattatctttcaataatc-taatgtataatttctgaaaattaatctaatggaatagtt 493099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0348 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0348
Description:

Target: scaffold0348; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 68 - 116
Target Start/End: Original strand, 14620 - 14668
Alignment:
Q  68 gaaccgattgtgctgtgtaatcattctgcaaaactaaggtaagggtgag 116  Q
    ||||||||| ||||||| |||| ||||||||| ||||||||||||||||    
T  14620 gaaccgattttgctgtgcaatctttctgcaaatctaaggtaagggtgag 14668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0348; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 101 - 156
Target Start/End: Complemental strand, 9391 - 9336
Alignment:
Q  101 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 156  Q
    |||||||||||||| || ||||| || ||| ||||||| |||||||||||||||||    
T  9391 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 9336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 98 - 158
Target Start/End: Original strand, 39503 - 39563
Alignment:
Q  98 aaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattga 158  Q
    |||| |||||||||||||| ||| ||||| || |||||||| ||||||||| |||||||||    
T  39503 aaacaaaggtaagggtgaggctaactctcaatgatcataatatataatttcagaaaattga 39563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 104 - 291
Target Start/End: Complemental strand, 73337 - 73149
Alignment:
Q  104 aggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagat-aaattgagggttagggtttg 202  Q
    ||||||||||| || ||||| || || |||||||| |||||||| |||||||| | ||||| | |||| | | |||||| ||||||||  ||||||| ||    
T  73337 aggtaagggtgggattatctttcaatgatcataatgtataatttatgaaaattaatctaataggatagctcttgaagataaaattgagaattagggtgtg 73238  T
Q  203 atgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgct 291  Q
    ||| ||||| |||| | ||  | |||| ||||||||| | | ||||||||| | |||||| | ||||   ||||||||||  |||||||    
T  73237 atgttgattttgaaagaaacggtgtaagaatcatgtttaatgtgttgtaatttgatgttccgtatgatttcttaatctataatgttgct 73149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0127 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 101 - 156
Target Start/End: Complemental strand, 10294 - 10239
Alignment:
Q  101 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 156  Q
    ||||||||||||||||| |||||  | ||||||||||| | |||||||||||||||    
T  10294 ctaaggtaagggtgagattatcttccaataatcataatatgtaatttctgaaaatt 10239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 101 - 156
Target Start/End: Complemental strand, 135493 - 135438
Alignment:
Q  101 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 156  Q
    |||||||||| |||||| ||||| || ||| ||||||| |||||||||||||||||    
T  135493 ctaaggtaagcgtgagattatctttcaatagtcataatatataatttctgaaaatt 135438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1318 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold1318
Description:

Target: scaffold1318; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 102 - 156
Target Start/End: Original strand, 1913 - 1967
Alignment:
Q  102 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 156  Q
    ||||||||||||| || ||||| || ||| ||||||| |||||||||||||||||    
T  1913 taaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 1967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0453 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0453
Description:

Target: scaffold0453; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 101 - 185
Target Start/End: Original strand, 10550 - 10634
Alignment:
Q  101 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaa 185  Q
    |||||||||| ||| || ||||| || || ||| |||| ||||||||||||||||| | ||||| | |||||| | |||||||||    
T  10550 ctaaggtaagtgtgggattatctttcaatgatcttaatgtataatttctgaaaattaatctaatagaatagttcttgaagataaa 10634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0335 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 102 - 158
Target Start/End: Original strand, 2628 - 2684
Alignment:
Q  102 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattga 158  Q
    ||||||||||||||| ||| ||||| || || ||||| ||||| |||||||||||||    
T  2628 taaggtaagggtgaggctaactctcaatgattataatatataacttctgaaaattga 2684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University