View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF20456_low_19 (Length: 435)
Name: NF20456_low_19
Description: NF20456
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20456_low_19 |
 | |
|
Alignment Details
Target: chr1 (Bit Score: 321; Significance: 0; HSPs: 12)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 321; E-Value: 0
Query Start/End: Original strand, 50 - 414
Target Start/End: Original strand, 40034232 - 40034596
Alignment:
| Q |
50 |
atatagtagttataatgtcttgtcttctgtgttgaatggacagattctgtttgtgatttcaagttcaaggactaatgggtgatgatgaaaaggttcatat |
149 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
40034232 |
atatagtagttataatgtcttgttttctgtgttgaatggacagattctgtttgtgatttcaagttcaaggactaatgggtgatgatgaaaaggttcatat |
40034331 |
T |
|
| Q |
150 |
taacattgtatttcttggtcatgtcgactctgggaagtcaaccactggtggtcatttgatctacaagcttggcggtattaaaaaggatgtcattgagaga |
249 |
Q |
| |
|
|||||| |||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
40034332 |
taacatcgtatttattggtaatgtcgactctgggaagtcaaccactggtggtcatttgatctacaagcttggcggtattaaaaaggatgtcattgagaaa |
40034431 |
T |
|
| Q |
250 |
tttgagaaagaagctgctaagatgaacaagcgctcgttcaagtatgcttgggtgcttgacaagctcaaggctgagcgtgagagaggtgtcacaattgata |
349 |
Q |
| |
|
|||||||||||||||||| |||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| |||||||| |||||||||| |
|
|
| T |
40034432 |
tttgagaaagaagctgctgagatgaacaagcgctcattcaagtatgcttgggtacttgacaagctcaaggctgagcgtgaaagaggtgttacaattgata |
40034531 |
T |
|
| Q |
350 |
tttccatgtccaagtttgagacaaccaaatatcactgcactctcattgacgcccccggacacaga |
414 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
40034532 |
tttccatgtccaagtttgagacaaccaaataccactgcactctcattgacgcccccggacacaga |
40034596 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 68 - 418
Target Start/End: Original strand, 38137413 - 38137760
Alignment:
| Q |
68 |
cttgtcttctgtgttgaatggacagattctgtttgtgatttcaagttcaaggactaatgggtgatgatgaaaaggttcatattaacattgtatttcttgg |
167 |
Q |
| |
|
||||| || |||||||||| | ||||| | |||||||||||||||| ||| | |||||| | | ||| || |||||||||||| |||| || |||| |
|
|
| T |
38137413 |
cttgttttttgtgttgaattggcagatattttttgtgatttcaagtttaagaagtaatggttaaggataaa---gttcatattaacgttgtggttattgg |
38137509 |
T |
|
| Q |
168 |
tcatgtcgactctgggaagtcaaccactggtggtcatttgatctacaagcttggcggtattaaaaaggatgtcattgagagatttgagaaagaagctgct |
267 |
Q |
| |
|
|||||| ||||||||||||||||| |||| |||||||||||||||||| ||||| |||||| |||||||||||||||||||| |||||||||||||| || |
|
|
| T |
38137510 |
tcatgttgactctgggaagtcaactactgctggtcatttgatctacaaacttggaggtattgaaaaggatgtcattgagagacttgagaaagaagctact |
38137609 |
T |
|
| Q |
268 |
aagatgaacaagcgctcgttcaagtatgcttgggtgcttgacaagctcaaggctgagcgtgagagaggtgtcacaattgatatttccatgtccaagtttg |
367 |
Q |
| |
|
|||| ||||||| ||||||||||||||||||||||| |||||||||||||| |||||||| |||||| |||| ||||| ||||| |||| ||||||| |
|
|
| T |
38137610 |
gagataaacaagccatcgttcaagtatgcttgggtgctcgacaagctcaaggccgagcgtgaaagaggtatcactattgacatttctctgtcaaagtttg |
38137709 |
T |
|
| Q |
368 |
agacaaccaaatatcactgcactctcattgacgcccccggacacagagatt |
418 |
Q |
| |
|
|||| ||||| || |||||||||||||||| |||||||||||||| |||| |
|
|
| T |
38137710 |
agactaccaagtactactgcactctcattgatgcccccggacacagggatt |
38137760 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 74 - 418
Target Start/End: Original strand, 45983272 - 45983612
Alignment:
| Q |
74 |
ttctgtgttgaatggacagattctgtttgtgatttcaagttcaaggactaatgggtgatgatgaaaaggttcatattaacattgtatttcttggtcatgt |
173 |
Q |
| |
|
||||||||||||| | ||||| | |||||||||||||||| |||||||||||| | | || ||||||||| |||||||||||| || |||||||||| |
|
|
| T |
45983272 |
ttctgtgttgaattggcagatatt-tttgtgatttcaagtttaaggactaatggctaa-ga--aaaaggttcgtattaacattgtggttattggtcatgt |
45983367 |
T |
|
| Q |
174 |
cgactctgggaagtcaaccactggtggtcatttgatctacaagcttggcggtattaaaaaggatgtcattgagagatttgagaaagaagctgctaagatg |
273 |
Q |
| |
|
||||| ||||||||||||||| ||||||||||||| |||| ||||| ||||| | ||| |||||||||||| ||||||||||||||||||||||| |
|
|
| T |
45983368 |
ggactccgggaagtcaaccactactggtcatttgatccacaaacttggatgtattcacaagagtgtcattgagagtcttgagaaagaagctgctaagatg |
45983467 |
T |
|
| Q |
274 |
aacaagcgctcgttcaagtatgcttgggtgcttgacaagctcaaggctgagcgtgagagaggtgtcacaattgatatttccatgtccaagtttgagacaa |
373 |
Q |
| |
|
|||||||| || |||||||||||||||||||||||||||||||||||||| ||||| |||||||| |||||||| ||| || |||| ||||||||||||| |
|
|
| T |
45983468 |
aacaagcgttcattcaagtatgcttgggtgcttgacaagctcaaggctgaacgtgaaagaggtgttacaattgacattaccctgtcgaagtttgagacaa |
45983567 |
T |
|
| Q |
374 |
ccaaatatcactgcactctcattgacgcccccggacacagagatt |
418 |
Q |
| |
|
||| || |||||||| ||||||| |||||||||||||| |||| |
|
|
| T |
45983568 |
acaagtacaactgcactgtcattgatgcccccggacacagggatt |
45983612 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 138 - 418
Target Start/End: Original strand, 7890664 - 7890944
Alignment:
| Q |
138 |
aaaggttcatattaacattgtatttcttggtcatgtcgactctgggaagtcaaccactggtggtcatttgatctacaagcttggcggtattaaaaaggat |
237 |
Q |
| |
|
|||| ||| |||||||||| | ||| |||||||||||||||| ||||||||||| || | |||||||||||||||||||||||| |||||| |||||||| |
|
|
| T |
7890664 |
aaagtttcctattaacattctgtttattggtcatgtcgactccgggaagtcaacgacggctggtcatttgatctacaagcttggaggtattgaaaaggat |
7890763 |
T |
|
| Q |
238 |
gtcattgagagatttgagaaagaagctgctaagatgaacaagcgctcgttcaagtatgcttgggtgcttgacaagctcaaggctgagcgtgagagaggtg |
337 |
Q |
| |
|
||||| || ||||||||||||||||||||| ||||||||| || || ||||||||||||||||||||||||||||||||||| |||||||| |||||| |
|
|
| T |
7890764 |
gtcatcgatagatttgagaaagaagctgctgagatgaacaggcattcattcaagtatgcttgggtgcttgacaagctcaaggccgagcgtgaaagaggta |
7890863 |
T |
|
| Q |
338 |
tcacaattgatatttccatgtccaagtttgagacaaccaaatatcactgcactctcattgacgcccccggacacagagatt |
418 |
Q |
| |
|
|||||||||| ||||| ||| ||||||||||||||||| | | ||||||||||||||| ||||| |||||||| |||| |
|
|
| T |
7890864 |
tcacaattgacatttctctgtggaagtttgagacaaccaacttccgctgcactctcattgatgcccctggacacagggatt |
7890944 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 136 - 410
Target Start/End: Complemental strand, 51292282 - 51292009
Alignment:
| Q |
136 |
gaaaaggttcatattaacattgtatttcttggtcatgtcgactctgggaagtcaaccactggtggtcatttgatctacaagcttggcggtattaaaaagg |
235 |
Q |
| |
|
|||||||||| |||||||||||| ||| ||||||||||||||| ||| ||||||| |||| |||||||||||||||||||||||| |||||| | ||| |
|
|
| T |
51292282 |
gaaaaggttcgtattaacattgtgtttattggtcatgtcgactatggaaagtcaaatactgctggtcatttgatctacaagcttggaggtattgacaaga |
51292183 |
T |
|
| Q |
236 |
atgtcattgagagatttgagaaagaagctgctaagatgaacaagcgctcgttcaagtatgcttgggtgcttgacaagctcaaggctgagcgtgagagagg |
335 |
Q |
| |
|
||| |||||||||| |||||||||||||| || ||||||||| ||| || |||| |||||||||||||||||||||| |||||||||||||||| ||||| |
|
|
| T |
51292182 |
atgacattgagagacttgagaaagaagctactgagatgaacatgcgttcattcacgtatgcttgggtgcttgacaagttcaaggctgagcgtgaaagagg |
51292083 |
T |
|
| Q |
336 |
tgtcacaattgatatttccatgtccaagtttgagacaaccaaatatcactgcactctcattgacgcccccggaca |
410 |
Q |
| |
|
| |||||||||| ||||| | ||||||||||| |||| ||| || | |||||||||||||| ||||||||||| |
|
|
| T |
51292082 |
tatcacaattgacatttctctatccaagtttga-acaatcaagtactattgcactctcattgatgcccccggaca |
51292009 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 69 - 418
Target Start/End: Original strand, 45993047 - 45993392
Alignment:
| Q |
69 |
ttgtcttctgtgttgaatggacagattctgtttgtgatttcaagttcaaggactaatgggtgatgatgaaaaggttcatattaacattgtatttcttggt |
168 |
Q |
| |
|
|||| ||||||||||||| ||||| || |||||||||||||||| |||||||||||| || | |||||||||| ||||| |||||| || ||||| |
|
|
| T |
45993047 |
ttgttttctgtgttgaattcgcagat-ctttttgtgatttcaagtttaaggactaatgg---ataaggaaaaggttcctattagcattgtggttattggt |
45993142 |
T |
|
| Q |
169 |
catgtcgactctgggaagtcaaccactggtggtcatttgatctacaagcttggcggtattaaaaaggatgtcattgagagatttgagaaagaagctgcta |
268 |
Q |
| |
|
||||||||||| ||||||||||||||| ||||||||| ||| |||| ||||| ||||| | ||| |||||| ||||| ||||||||||||||||| |
|
|
| T |
45993143 |
catgtcgactccgggaagtcaaccactactggtcatttcatccacaaacttggatgtattcacaagagtgtcatcgagagtcttgagaaagaagctgctg |
45993242 |
T |
|
| Q |
269 |
agatgaacaagcgctcgttcaagtatgcttgggtgcttgacaagctcaaggctgagcgtgagagaggtgtcacaattgatatttccatgtccaagtttga |
368 |
Q |
| |
|
|||||| |||||| || ||||||||||||||||||||||||||||||||| |||||||||| |||||| |||||||||| | ||| |||| |||||||| |
|
|
| T |
45993243 |
agatgatcaagcgttcattcaagtatgcttgggtgcttgacaagctcaagactgagcgtgaaagaggtatcacaattgacagttctttgtcgaagtttga |
45993342 |
T |
|
| Q |
369 |
gacaaccaaatatcactgcactctcattgacgcccccggacacagagatt |
418 |
Q |
| |
|
||||| ||| || ||||||| ||||||| ||| |||||||||| |||| |
|
|
| T |
45993343 |
gacaaacaagtacagctgcactgtcattgatgcctccggacacagggatt |
45993392 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 136 - 418
Target Start/End: Complemental strand, 3301397 - 3301115
Alignment:
| Q |
136 |
gaaaaggttcatattaacattgtatttcttggtcatgtcgactctgggaagtcaaccactggtggtcatttgatctacaagcttggcggtattaaaaagg |
235 |
Q |
| |
|
||||||||||| ||||||||||| | |||||||||||||||| |||||||||||||| ||||| ||||||||||||||||| |||||| | ||| |
|
|
| T |
3301397 |
gaaaaggttcacattaacattgttgtcattggtcatgtcgactccgggaagtcaaccaccaccggtcacttgatctacaagcttggaggtattgacaagc |
3301298 |
T |
|
| Q |
236 |
atgtcattgagagatttgagaaagaagctgctaagatgaacaagcgctcgttcaagtatgcttgggtgcttgacaagctcaaggctgagcgtgagagagg |
335 |
Q |
| |
|
||| |||||||| |||||||||||||||||| ||||||||||||| || |||||||||||||||||||| ||||||||||||||||| |||| ||||| |
|
|
| T |
3301297 |
gtgtgattgagaggtttgagaaagaagctgctgagatgaacaagcgttcattcaagtatgcttgggtgctcgacaagctcaaggctgaatgtgaaagagg |
3301198 |
T |
|
| Q |
336 |
tgtcacaattgatatttccatgtccaagtttgagacaaccaaatatcactgcactctcattgacgcccccggacacagagatt |
418 |
Q |
| |
|
| |||||||||| ||| | ||| ||||||||||| || || || |||||||| ||||||| |||||||||||||| |||| |
|
|
| T |
3301197 |
tatcacaattgacattgctctgtggaagtttgagactactaagtactactgcactgtcattgatgcccccggacacagggatt |
3301115 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 164 - 418
Target Start/End: Original strand, 7888425 - 7888679
Alignment:
| Q |
164 |
ttggtcatgtcgactctgggaagtcaaccactggtggtcatttgatctacaagcttggcggtattaaaaaggatgtcattgagagatttgagaaagaagc |
263 |
Q |
| |
|
|||||||||| || || |||||||||||||||| |||||||||||||||||||||||| |||||| ||||||||||||| |||| | ||||||||||||| |
|
|
| T |
7888425 |
ttggtcatgttgattccgggaagtcaaccactgctggtcatttgatctacaagcttggaggtattgaaaaggatgtcatcgagaaacttgagaaagaagc |
7888524 |
T |
|
| Q |
264 |
tgctaagatgaacaagcgctcgttcaagtatgcttgggtgcttgacaagctcaaggctgagcgtgagagaggtgtcacaattgatatttccatgtccaag |
363 |
Q |
| |
|
|||| |||| |||| || | |||||||||||||||||||||||||| ||||||||||||||||| |||||| |||||||||| ||||| | | ||| |
|
|
| T |
7888525 |
tgctgagataaacagacgtttattcaagtatgcttgggtgcttgacaaactcaaggctgagcgtgaaagaggtatcacaattgacatttctctttggaag |
7888624 |
T |
|
| Q |
364 |
tttgagacaaccaaatatcactgcactctcattgacgcccccggacacagagatt |
418 |
Q |
| |
|
||| ||||||||| || ||||||||||||||| |||||||||||||| |||| |
|
|
| T |
7888625 |
tttcagacaaccagctactgctgcactctcattgatgcccccggacacagggatt |
7888679 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 136 - 418
Target Start/End: Complemental strand, 43046114 - 43045832
Alignment:
| Q |
136 |
gaaaaggttcatattaacattgtatttcttggtcatgtcgactctgggaagtcaaccactggtggtcatttgatctacaagcttggcggtattaaaaagg |
235 |
Q |
| |
|
||||||||||| || |||||||| | |||| ||||||||||||||||| |||||||| |||||| ||||||||||||||||| |||||| | ||| |
|
|
| T |
43046114 |
gaaaaggttcacatcaacattgtggtcattggccatgtcgactctgggaaatcaaccaccactggtcacttgatctacaagcttggaggtattgacaagc |
43046015 |
T |
|
| Q |
236 |
atgtcattgagagatttgagaaagaagctgctaagatgaacaagcgctcgttcaagtatgcttgggtgcttgacaagctcaaggctgagcgtgagagagg |
335 |
Q |
| |
|
|||||||||||| |||||||||||||||||| ||||||||||||| || ||||||||||| ||||| |||||||||||||||||||| ||||| ||||| |
|
|
| T |
43046014 |
gtgtcattgagaggtttgagaaagaagctgctgagatgaacaagcgttcattcaagtatgcctgggtccttgacaagctcaaggctgaacgtgaaagagg |
43045915 |
T |
|
| Q |
336 |
tgtcacaattgatatttccatgtccaagtttgagacaaccaaatatcactgcactctcattgacgcccccggacacagagatt |
418 |
Q |
| |
|
| |||| ||||| ||| | | | ||||||||||||||||| || |||||||| |||| || |||||||||||||| |||| |
|
|
| T |
43045914 |
tatcaccattgacattgctctctggaagtttgagacaaccaagtactactgcactgtcatcgatgcccccggacacagggatt |
43045832 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 136 - 418
Target Start/End: Complemental strand, 43084542 - 43084260
Alignment:
| Q |
136 |
gaaaaggttcatattaacattgtatttcttggtcatgtcgactctgggaagtcaaccactggtggtcatttgatctacaagcttggcggtattaaaaagg |
235 |
Q |
| |
|
||||||||||| || |||||||| | |||| ||||| ||||||||||| |||||||| |||||| ||||||||||||||||| |||||| | ||| |
|
|
| T |
43084542 |
gaaaaggttcacatcaacattgtggtcattggccatgttgactctgggaaatcaaccacaactggtcacttgatctacaagcttggaggtattgacaagc |
43084443 |
T |
|
| Q |
236 |
atgtcattgagagatttgagaaagaagctgctaagatgaacaagcgctcgttcaagtatgcttgggtgcttgacaagctcaaggctgagcgtgagagagg |
335 |
Q |
| |
|
|||||| ||||| |||||||||||||||||| ||||||||||||| || ||||||||||| ||||| |||||||||||||||||||| ||||| ||||| |
|
|
| T |
43084442 |
gtgtcatagagaggtttgagaaagaagctgctgagatgaacaagcgttcattcaagtatgcctgggtccttgacaagctcaaggctgaacgtgaaagagg |
43084343 |
T |
|
| Q |
336 |
tgtcacaattgatatttccatgtccaagtttgagacaaccaaatatcactgcactctcattgacgcccccggacacagagatt |
418 |
Q |
| |
|
| |||| ||||| ||| | | | ||||||||||||||||| || |||||||| |||| || |||||||||||||| |||| |
|
|
| T |
43084342 |
tatcaccattgacattgctctctggaagtttgagacaaccaagtactactgcactgtcatcgatgcccccggacacagggatt |
43084260 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 164 - 418
Target Start/End: Original strand, 43066321 - 43066575
Alignment:
| Q |
164 |
ttggtcatgtcgactctgggaagtcaaccactggtggtcatttgatctacaagcttggcggtattaaaaaggatgtcattgagagatttgagaaagaagc |
263 |
Q |
| |
|
|||| |||||||||||||| ||||||||||| |||||| || |||||||| ||||| |||||| | ||| |||||||||||| |||||||||||||| |
|
|
| T |
43066321 |
ttggccatgtcgactctggcaagtcaaccaccactggtcacttaatctacaaacttggaggtattgacaagcgtgtcattgagaggtttgagaaagaagc |
43066420 |
T |
|
| Q |
264 |
tgctaagatgaacaagcgctcgttcaagtatgcttgggtgcttgacaagctcaaggctgagcgtgagagaggtgtcacaattgatatttccatgtccaag |
363 |
Q |
| |
|
|||| ||||||||||||| || ||||||||||| ||||| |||||||||||||||||||| ||||| |||||| |||| ||||| ||| | | | ||| |
|
|
| T |
43066421 |
tgctgagatgaacaagcgttcattcaagtatgcctgggttcttgacaagctcaaggctgaacgtgaaagaggtatcaccattgacattgctctctggaag |
43066520 |
T |
|
| Q |
364 |
tttgagacaaccaaatatcactgcactctcattgacgcccccggacacagagatt |
418 |
Q |
| |
|
|||||||||||||| || |||||||| |||| || |||||||||||||| |||| |
|
|
| T |
43066521 |
tttgagacaaccaagtactactgcactgtcatcgatgcccccggacacagggatt |
43066575 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #12
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 237 - 418
Target Start/End: Complemental strand, 43045560 - 43045379
Alignment:
| Q |
237 |
tgtcattgagagatttgagaaagaagctgctaagatgaacaagcgctcgttcaagtatgcttgggtgcttgacaagctcaaggctgagcgtgagagaggt |
336 |
Q |
| |
|
|||||||||||| |||||||||||||||||| ||||||||||||| || ||||||||||| ||||| |||||||||||||||||||| ||||| |||||| |
|
|
| T |
43045560 |
tgtcattgagaggtttgagaaagaagctgctgagatgaacaagcgttcattcaagtatgcctgggtccttgacaagctcaaggctgaacgtgaaagaggt |
43045461 |
T |
|
| Q |
337 |
gtcacaattgatatttccatgtccaagtttgagacaaccaaatatcactgcactctcattgacgcccccggacacagagatt |
418 |
Q |
| |
|
|||| ||||| ||| | | | ||||||||||||||||| || |||||||| |||| || |||||||||||||| |||| |
|
|
| T |
43045460 |
atcaccattgacattgctctctggaagtttgagacaaccaagtactactgcactgtcatcgatgcccccggacacagggatt |
43045379 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 177; Significance: 3e-95; HSPs: 4)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 177; E-Value: 3e-95
Query Start/End: Original strand, 138 - 418
Target Start/End: Complemental strand, 4620355 - 4620075
Alignment:
| Q |
138 |
aaaggttcatattaacattgtatttcttggtcatgtcgactctgggaagtcaaccactggtggtcatttgatctacaagcttggcggtattaaaaaggat |
237 |
Q |
| |
|
||||||| |||||| ||||| ||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
4620355 |
aaaggttggtattaatattgtgtttattggtcatgtcgactctgggaagtcaaccactgctggtcatttgatctacaagcttggaggtattaaaaaggat |
4620256 |
T |
|
| Q |
238 |
gtcattgagagatttgagaaagaagctgctaagatgaacaagcgctcgttcaagtatgcttgggtgcttgacaagctcaaggctgagcgtgagagaggtg |
337 |
Q |
| |
|
||||||||| |||||||||||||||| ||| |||| |||| | | || ||||| |||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
4620255 |
gtcattgagcgatttgagaaagaagccgctgagataaacatgtgttcattcaaatatgcttgggtgcttgacaagctcaaggctgagcgtgaaagaggta |
4620156 |
T |
|
| Q |
338 |
tcacaattgatatttccatgtccaagtttgagacaaccaaatatcactgcactctcattgacgcccccggacacagagatt |
418 |
Q |
| |
|
||||||| || ||||| |||||||||||||||||||||| || |||||||||||||||| ||||||||||||||||||| |
|
|
| T |
4620155 |
tcacaatcgacatttctctgtccaagtttgagacaaccaagtactactgcactctcattgatgcccccggacacagagatt |
4620075 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 146; E-Value: 9e-77
Query Start/End: Original strand, 165 - 418
Target Start/End: Complemental strand, 1847030 - 1846777
Alignment:
| Q |
165 |
tggtcatgtcgactctgggaagtcaaccactggtggtcatttgatctacaagcttggcggtattaaaaaggatgtcattgagagatttgagaaagaagct |
264 |
Q |
| |
|
||||||||||||||| ||||||||||| || | |||||||||||||||||||||||| |||||| ||||||||||||| ||||||||||||||||||||| |
|
|
| T |
1847030 |
tggtcatgtcgactccgggaagtcaacgacggctggtcatttgatctacaagcttggaggtattgaaaaggatgtcatcgagagatttgagaaagaagct |
1846931 |
T |
|
| Q |
265 |
gctaagatgaacaagcgctcgttcaagtatgcttgggtgcttgacaagctcaaggctgagcgtgagagaggtgtcacaattgatatttccatgtccaagt |
364 |
Q |
| |
|
||| |||| |||| ||| || ||||||||||||||||||||||||||||||||||| |||||||| |||||| |||||||||| ||||| | | |||| |
|
|
| T |
1846930 |
gctgagataaacaggcgttcattcaagtatgcttgggtgcttgacaagctcaaggccgagcgtgaaagaggtatcacaattgacatttctctatggaagt |
1846831 |
T |
|
| Q |
365 |
ttgagacaaccaaatatcactgcactctcattgacgcccccggacacagagatt |
418 |
Q |
| |
|
||||||||||||| | | ||||||||||||||| |||||||||||||| |||| |
|
|
| T |
1846830 |
ttgagacaaccaacttcctctgcactctcattgatgcccccggacacagggatt |
1846777 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 74 - 413
Target Start/End: Original strand, 4787067 - 4787405
Alignment:
| Q |
74 |
ttctgtgttgaatggacagattctgtttgtgatttcaagttcaaggactaatgggtgatgatgaaaaggttcatattaacattgtatttcttggtcatgt |
173 |
Q |
| |
|
||||||||| ||| | ||||| || |||||||||||||||| |||||||||||| | || | |||||||||| |||||||||||| || ||||||| | |
|
|
| T |
4787067 |
ttctgtgttcaattggcagat-ctttttgtgatttcaagtttaaggactaatggataataaagaaaaggttcgtattaacattgtggttattggtcaagc |
4787165 |
T |
|
| Q |
174 |
cgactctgggaagtcaaccactggtggtcatttgatctacaagcttggcggtattaaaaaggatgtcattgagagatttgagaaagaagctgctaagatg |
273 |
Q |
| |
|
| |||| |||||||||||||| || ||||||| ||||||||||||| || ||| ||||||||||||||||||| |||||||||||||| | || |
|
|
| T |
4787166 |
caactccgggaagtcaaccaccactgctcatttgctctacaagcttggaggcattggaaaggatgtcattgagagacttgagaaagaagcttatgaggct |
4787265 |
T |
|
| Q |
274 |
aacaagcgctcgttcaagtatgcttgggtgcttgacaagctcaaggctgagcgtgagagaggtgtcacaattgatatttccatgtccaagtttgagacaa |
373 |
Q |
| |
|
||| || || |||||||||||||||||||||||||| ||||||| ||||||||| ||||||| ||||||||| ||||| ||||||||||||||||||| |
|
|
| T |
4787266 |
aactggccttcattcaagtatgcttgggtgcttgacaaactcaagggtgagcgtgaaagaggtgccacaattgacatttctatgtccaagtttgagacaa |
4787365 |
T |
|
| Q |
374 |
ccaaatatcactgcactctcattgacgcccccggacacag |
413 |
Q |
| |
|
||| || |||||||| ||||||| || ||||||||||| |
|
|
| T |
4787366 |
acaagtacaactgcactgtcattgatgctcccggacacag |
4787405 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 74 - 410
Target Start/End: Complemental strand, 4298197 - 4297866
Alignment:
| Q |
74 |
ttctgtgttgaatggacagattctgtttgtgatttcaagttcaaggactaatgggtgatgatgaaaaggttcatattaacattgtatttcttggtcatgt |
173 |
Q |
| |
|
||||||||||||| | ||||| || ||||||||||||| || |||||||||||| || | |||||| || |||||||||||| || |||| |||| |
|
|
| T |
4298197 |
ttctgtgttgaattggcagat-ctttttgtgatttcaattt-aaggactaatgg---ataagaaaaaggctcgtattaacattgtggttattggccatgc |
4298103 |
T |
|
| Q |
174 |
cgactctgggaagtcaaccactggtggtcatttgatctacaagcttggcggtattaaaaaggatgtcattgagagatttgagaaagaagctgctaagatg |
273 |
Q |
| |
|
| |||| ||||||||||||||| || ||||||| ||||||| || || || ||| |||||||||||||||||||| ||||||||| || || | || | |
|
|
| T |
4298102 |
caactccgggaagtcaaccactactgctcatttgctctacaaactcggaggcattgaaaaggatgtcattgagagacttgagaaagtagatgttgaggtt |
4298003 |
T |
|
| Q |
274 |
aacaagcgctcgttcaagtatgcttgggtgcttgacaagctcaaggctgagcgtgagagaggtgtcacaattgatatttccatgtccaagtttgagacaa |
373 |
Q |
| |
|
|||| || |||||||||||||||||||| |||||||| ||||| ||||| | ||| ||||||| ||||||||| ||||| |||||||||||||||||| |
|
|
| T |
4298002 |
aacatgccttcgttcaagtatgcttgggtacttgacaaactcaaagctgaccatgaaagaggtgccacaattgacatttctctgtccaagtttgagacaa |
4297903 |
T |
|
| Q |
374 |
ccaaatatcactgcactctcattgacgcccccggaca |
410 |
Q |
| |
|
||| || |||||| | ||||||| ||||||||||| |
|
|
| T |
4297902 |
acaagtacaactgcattgtcattgatgcccccggaca |
4297866 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 141; Significance: 9e-74; HSPs: 4)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 141; E-Value: 9e-74
Query Start/End: Original strand, 65 - 418
Target Start/End: Complemental strand, 34691559 - 34691212
Alignment:
| Q |
65 |
tgtcttgtcttctgtgttgaatggacagattctgtttgtgatttcaagttcaaggactaatgggtgatgatgaaaaggttcatattaacattgtatttct |
164 |
Q |
| |
|
|||||||| ||||||||||||| ||||||| ||||||| ||||||||||| ||| | | |||| ||| |||||||||||| |||||||| ||| | |
|
|
| T |
34691559 |
tgtcttgttttctgtgttgaattgacagat-ctgtttgagatttcaagtttaagtagtgatggttgacac---aaaggttcatatcaacattgtgtttat |
34691464 |
T |
|
| Q |
165 |
tggtcatgtcgactctgggaagtcaaccactggtggtcatttgatctacaagcttggcggtattaaaaaggatgtcattgagagatttgagaaagaagct |
264 |
Q |
| |
|
|||||||||| |||||||||||||||| || | |||||||||||| ||||||||||| |||||| ||||| || ||||||| | ||| |||||||||| |
|
|
| T |
34691463 |
tggtcatgtcaactctgggaagtcaactacggctggtcatttgatttacaagcttggaggtattgaaaagagtgccattgaggcacttgggaaagaagct |
34691364 |
T |
|
| Q |
265 |
gctaagatgaacaagcgctcgttcaagtatgcttgggtgcttgacaagctcaaggctgagcgtgagagaggtgtcacaattgatatttccatgtccaagt |
364 |
Q |
| |
|
||| ||||||| ||||| || |||||||||||||||||||||||||||||||| ||||||||||| |||||| |||||||||| ||||| ||| ||||| |
|
|
| T |
34691363 |
gctgagatgaagaagcgttcattcaagtatgcttgggtgcttgacaagctcaacgctgagcgtgaaagaggtatcacaattgacatttctatg--caagt |
34691266 |
T |
|
| Q |
365 |
ttgagacaaccaaatatcactgcactctcattgacgcccccggacacagagatt |
418 |
Q |
| |
|
||||||||||||| || || |||||||||||| || ||||||||||| |||| |
|
|
| T |
34691265 |
ttgagacaaccaagtactgcttcactctcattgatgctcccggacacagggatt |
34691212 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 141; E-Value: 9e-74
Query Start/End: Original strand, 65 - 418
Target Start/End: Complemental strand, 34713971 - 34713624
Alignment:
| Q |
65 |
tgtcttgtcttctgtgttgaatggacagattctgtttgtgatttcaagttcaaggactaatgggtgatgatgaaaaggttcatattaacattgtatttct |
164 |
Q |
| |
|
|||||||| ||||||||||||| ||||||| ||||||| ||||||||||| ||| | | |||| ||| |||||||||||| |||||||| ||| | |
|
|
| T |
34713971 |
tgtcttgttttctgtgttgaattgacagat-ctgtttgagatttcaagtttaagtagtgatggttgacac---aaaggttcatatcaacattgtgtttat |
34713876 |
T |
|
| Q |
165 |
tggtcatgtcgactctgggaagtcaaccactggtggtcatttgatctacaagcttggcggtattaaaaaggatgtcattgagagatttgagaaagaagct |
264 |
Q |
| |
|
|||||||||| |||||||||||||||| || | |||||||||||| ||||||||||| |||||| ||||| || ||||||| | ||| |||||||||| |
|
|
| T |
34713875 |
tggtcatgtcaactctgggaagtcaactacggctggtcatttgatttacaagcttggaggtattgaaaagagtgccattgaggcacttgggaaagaagct |
34713776 |
T |
|
| Q |
265 |
gctaagatgaacaagcgctcgttcaagtatgcttgggtgcttgacaagctcaaggctgagcgtgagagaggtgtcacaattgatatttccatgtccaagt |
364 |
Q |
| |
|
||| ||||||| ||||| || |||||||||||||||||||||||||||||||| ||||||||||| |||||| |||||||||| ||||| ||| ||||| |
|
|
| T |
34713775 |
gctgagatgaagaagcgttcattcaagtatgcttgggtgcttgacaagctcaacgctgagcgtgaaagaggtatcacaattgacatttctatg--caagt |
34713678 |
T |
|
| Q |
365 |
ttgagacaaccaaatatcactgcactctcattgacgcccccggacacagagatt |
418 |
Q |
| |
|
||||||||||||| || || |||||||||||| || ||||||||||| |||| |
|
|
| T |
34713677 |
ttgagacaaccaagtactgcttcactctcattgatgctcccggacacagggatt |
34713624 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 146 - 418
Target Start/End: Complemental strand, 16232831 - 16232559
Alignment:
| Q |
146 |
atattaacattgtatttcttggtcatgtcgactctgggaagtcaaccactggtggtcatttgatctacaagcttggcggtattaaaaaggatgtcattga |
245 |
Q |
| |
|
|||| |||||||| ||| ||||||||||| | |||||||||||||| |||| ||||||||| | ||||||||||| |||||| ||||| || |||||| |
|
|
| T |
16232831 |
atatcaacattgtctttattggtcatgtcaattctgggaagtcaactactgccggtcatttgctttacaagcttggaggtattcaaaagagtgccattga |
16232732 |
T |
|
| Q |
246 |
gagatttgagaaagaagctgctaagatgaacaagcgctcgttcaagtatgcttgggtgcttgacaagctcaaggctgagcgtgagagaggtgtcacaatt |
345 |
Q |
| |
|
| | ||| ||||||||||||| ||||||| | ||| || |||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||| |
|
|
| T |
16232731 |
ggcacttgggaaagaagctgctgagatgaagatgcgttcattcaagtatgcttgggtgcttgacaagctcaaggctgagcgtgaaagaggtatcacaatt |
16232632 |
T |
|
| Q |
346 |
gatatttccatgtccaagtttgagacaaccaaatatcactgcactctcattgacgcccccggacacagagatt |
418 |
Q |
| |
|
|| |||||||||| |||||||||||||||||| || ||||| |||||||| |||||||||||||| |||| |
|
|
| T |
16232631 |
gacatttccatgtgcaagtttgagacaaccaagtactgttgcaccctcattgatgcccccggacacagggatt |
16232559 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 138 - 336
Target Start/End: Complemental strand, 33861504 - 33861303
Alignment:
| Q |
138 |
aaaggttcatattaacattgtatttcttggtcatgtcgactctgggaagtcaaccactggtggtcatttgatctacaagcttggcggtattaaaaaggat |
237 |
Q |
| |
|
|||| |||||||||||||||| || |||||||||| |||||||||||||||||||| ||||||||| || |||||||||| ||||| | ||| || |
|
|
| T |
33861504 |
aaagtttcatattaacattgtggttattggtcatgttgactctgggaagtcaaccacaaccggtcatttgctccacaagcttggatgtattgacaagcat |
33861405 |
T |
|
| Q |
238 |
gtcattgagagatttgagaaagaagctgctaagatgaacaagcgctcgttcaagtatgc---ttgggtgcttgacaagctcaaggctgagcgtgagagag |
334 |
Q |
| |
|
|||||||| || ||||| ||||||||||| |||| ||||| | || ||||||||||| |||||| |||||||||||| ||||||||||||| |||| |
|
|
| T |
33861404 |
gtcattgacagtcttgaggaagaagctgctcagatcgacaagtgttcattcaagtatgctaattgggttcttgacaagctcgaggctgagcgtgaaagag |
33861305 |
T |
|
| Q |
335 |
gt |
336 |
Q |
| |
|
|| |
|
|
| T |
33861304 |
gt |
33861303 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 123; Significance: 5e-63; HSPs: 3)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 136 - 418
Target Start/End: Complemental strand, 4232134 - 4231852
Alignment:
| Q |
136 |
gaaaaggttcatattaacattgtatttcttggtcatgtcgactctgggaagtcaaccactggtggtcatttgatctacaagcttggcggtattaaaaagg |
235 |
Q |
| |
|
||||||||||| ||||||||||| | |||| ||||||||||||||||||||||| || |||||| ||||||||||||||||| |||||| | ||| |
|
|
| T |
4232134 |
gaaaaggttcacattaacattgttgtcattggccatgtcgactctgggaagtcaactaccactggtcacttgatctacaagcttggaggtattgacaagc |
4232035 |
T |
|
| Q |
236 |
atgtcattgagagatttgagaaagaagctgctaagatgaacaagcgctcgttcaagtatgcttgggtgcttgacaagctcaaggctgagcgtgagagagg |
335 |
Q |
| |
|
||| |||||||| |||||||||||||||||| ||||||||||||| || || |||||||||||||| |||||||||||||||||||||||||| ||||| |
|
|
| T |
4232034 |
gtgtgattgagaggtttgagaaagaagctgctgagatgaacaagcgttcatttaagtatgcttgggttcttgacaagctcaaggctgagcgtgaaagagg |
4231935 |
T |
|
| Q |
336 |
tgtcacaattgatatttccatgtccaagtttgagacaaccaaatatcactgcactctcattgacgcccccggacacagagatt |
418 |
Q |
| |
|
| |||||||||| ||| | ||| ||||||||||| || || || |||||||| ||||||| ||||| |||||||| |||| |
|
|
| T |
4231934 |
tatcacaattgacattgctctgtggaagtttgagaccactaagtactactgcactgtcattgatgcccctggacacagggatt |
4231852 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 138 - 221
Target Start/End: Original strand, 19964612 - 19964695
Alignment:
| Q |
138 |
aaaggttcatattaacattgtatttcttggtcatgtcgactctgggaagtcaaccactggtggtcatttgatctacaagcttgg |
221 |
Q |
| |
|
|||| ||||| |||||||||| || |||||||||| ||||||||||||||||||||| |||||| |||||| |||||||||| |
|
|
| T |
19964612 |
aaagattcatgttaacattgtggttattggtcatgttgactctgggaagtcaaccactactggtcacttgatccacaagcttgg |
19964695 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 19 - 49
Target Start/End: Complemental strand, 508088 - 508058
Alignment:
| Q |
19 |
atagggttggtaagtaatactactcctagac |
49 |
Q |
| |
|
||||||||||||||||||||||||||||||| |
|
|
| T |
508088 |
atagggttggtaagtaatactactcctagac |
508058 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 79; Significance: 9e-37; HSPs: 3)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 136 - 410
Target Start/End: Original strand, 7528708 - 7528982
Alignment:
| Q |
136 |
gaaaaggttcatattaacattgtatttcttggtcatgtcgactctgggaagtcaaccactggtggtcatttgatctacaagcttggcggtattaaaaagg |
235 |
Q |
| |
|
|||||| ||||||| |||||||| | |||| |||||||||||||| || ||||| || |||||| |||||||||||||| || |||||| | ||| |
|
|
| T |
7528708 |
gaaaagattcatatcaacattgtcgtcattggacatgtcgactctggaaaatcaacaacaactggtcacttgatctacaagctaggaggtattgacaagc |
7528807 |
T |
|
| Q |
236 |
atgtcattgagagatttgagaaagaagctgctaagatgaacaagcgctcgttcaagtatgcttgggtgcttgacaagctcaaggctgagcgtgagagagg |
335 |
Q |
| |
|
||| || |||||||||||||| ||||||||| ||||||||||||| || ||||||||||| ||||| |||||||| || |||||||||||||| ||||| |
|
|
| T |
7528808 |
gtgtgatcgagagatttgagaaggaagctgctgagatgaacaagcgttcattcaagtatgcatgggttcttgacaaacttaaggctgagcgtgaaagagg |
7528907 |
T |
|
| Q |
336 |
tgtcacaattgatatttccatgtccaagtttgagacaaccaaatatcactgcactctcattgacgcccccggaca |
410 |
Q |
| |
|
| || || |||||| || ||| || |||||||| ||||| || ||||||| ||||||| || |||||||| |
|
|
| T |
7528908 |
aattaccatcgatattgccttgtggaaatttgagaccaccaagtactactgcacagtcattgatgctcccggaca |
7528982 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 136 - 410
Target Start/End: Original strand, 7519337 - 7519611
Alignment:
| Q |
136 |
gaaaaggttcatattaacattgtatttcttggtcatgtcgactctgggaagtcaaccactggtggtcatttgatctacaagcttggcggtattaaaaagg |
235 |
Q |
| |
|
|||||| ||||||| |||||||| | |||| |||||||||||||| || ||||| || |||||| |||||||||||||| || |||||| | ||| |
|
|
| T |
7519337 |
gaaaagattcatatcaacattgttgtcattggacatgtcgactctggaaaatcaacaacaactggtcacttgatctacaagctaggaggtattgacaagc |
7519436 |
T |
|
| Q |
236 |
atgtcattgagagatttgagaaagaagctgctaagatgaacaagcgctcgttcaagtatgcttgggtgcttgacaagctcaaggctgagcgtgagagagg |
335 |
Q |
| |
|
||| || |||||||| ||||| ||||||||| ||||||||||| | || |||||||| || ||||| ||||||||||| |||||||||||||| ||||| |
|
|
| T |
7519437 |
gtgtgatcgagagattcgagaaggaagctgctgagatgaacaagaggtctttcaagtacgcatgggttcttgacaagcttaaggctgagcgtgaaagagg |
7519536 |
T |
|
| Q |
336 |
tgtcacaattgatatttccatgtccaagtttgagacaaccaaatatcactgcactctcattgacgcccccggaca |
410 |
Q |
| |
|
| || ||||||||| | ||| || |||||||| ||||| || ||||||| ||||||| || |||||||| |
|
|
| T |
7519537 |
aattaccattgatattgctttgtggaaatttgagaccaccaagtactactgcacagtcattgatgctcccggaca |
7519611 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 19 - 49
Target Start/End: Complemental strand, 14544574 - 14544544
Alignment:
| Q |
19 |
atagggttggtaagtaatactactcctagac |
49 |
Q |
| |
|
||||||||||||||||||||||||||||||| |
|
|
| T |
14544574 |
atagggttggtaagtaatactactcctagac |
14544544 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 61; Significance: 5e-26; HSPs: 2)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 286 - 418
Target Start/End: Complemental strand, 16349656 - 16349524
Alignment:
| Q |
286 |
ttcaagtatgcttgggtgcttgacaagctcaaggctgagcgtgagagaggtgtcacaattgatatttccatgtccaagtttgagacaaccaaatatcact |
385 |
Q |
| |
|
||||||||||| ||||| |||||||| |||||||||||||| || |||||| |||||||||| | ||| |||| || |||||||||||||| || | || |
|
|
| T |
16349656 |
ttcaagtatgcgtgggttcttgacaaactcaaggctgagcgcgaaagaggtatcacaattgacaattctatgttgaattttgagacaaccaagtaccgct |
16349557 |
T |
|
| Q |
386 |
gcactctcattgacgcccccggacacagagatt |
418 |
Q |
| |
|
||||| ||||||| |||||||||||||| |||| |
|
|
| T |
16349556 |
gcactatcattgatgcccccggacacagggatt |
16349524 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 136 - 221
Target Start/End: Complemental strand, 16352295 - 16352210
Alignment:
| Q |
136 |
gaaaaggttcatattaacattgtatttcttggtcatgtcgactctgggaagtcaaccactggtggtcatttgatctacaagcttgg |
221 |
Q |
| |
|
||||||||||||||||||||||| || ||||||||||| ||||||||||||||||||| | ||||||||| ||||||||||||| |
|
|
| T |
16352295 |
gaaaaggttcatattaacattgtggttattggtcatgtcaactctgggaagtcaaccaccgccggtcatttgttctacaagcttgg |
16352210 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 19 - 49
Target Start/End: Complemental strand, 6932024 - 6931994
Alignment:
| Q |
19 |
atagggttggtaagtaatactactcctagac |
49 |
Q |
| |
|
||||||||||||||||||||||||||||||| |
|
|
| T |
6932024 |
atagggttggtaagtaatactactcctagac |
6931994 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 19 - 49
Target Start/End: Original strand, 9292961 - 9292991
Alignment:
| Q |
19 |
atagggttggtaagtaatactactcctagac |
49 |
Q |
| |
|
||||||||||||||||||||||||||||||| |
|
|
| T |
9292961 |
atagggttggtaagtaatactactcctagac |
9292991 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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