View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20456_low_30 (Length: 339)

Name: NF20456_low_30
Description: NF20456
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20456_low_30
NF20456_low_30
[»] chr3 (80 HSPs)
chr3 (32-189)||(25391243-25391403)
chr3 (187-324)||(45113747-45113884)
chr3 (193-296)||(27302120-27302223)
chr3 (198-324)||(53284325-53284451)
chr3 (192-324)||(48643617-48643749)
chr3 (186-324)||(39616924-39617062)
chr3 (187-324)||(31376188-31376325)
chr3 (186-296)||(53703727-53703837)
chr3 (212-324)||(43901604-43901716)
chr3 (195-318)||(21944295-21944418)
chr3 (193-296)||(16123761-16123863)
chr3 (186-324)||(50100207-50100346)
chr3 (193-294)||(44118226-44118327)
chr3 (195-279)||(46220372-46220456)
chr3 (194-261)||(50660014-50660081)
chr3 (192-282)||(24489368-24489457)
chr3 (186-251)||(21662883-21662948)
chr3 (192-285)||(48346502-48346595)
chr3 (186-254)||(28406464-28406532)
chr3 (210-294)||(51723399-51723483)
chr3 (192-251)||(53441993-53442052)
chr3 (187-281)||(19227364-19227458)
chr3 (222-291)||(6061115-6061184)
chr3 (222-324)||(2544491-2544594)
chr3 (192-254)||(2544542-2544604)
chr3 (187-251)||(28406553-28406617)
chr3 (210-294)||(44518057-44518141)
chr3 (210-294)||(45746492-45746576)
chr3 (232-291)||(8764275-8764334)
chr3 (232-295)||(8769177-8769240)
chr3 (192-243)||(19202253-19202304)
chr3 (222-285)||(27363213-27363276)
chr3 (211-294)||(52864973-52865056)
chr3 (186-252)||(379158-379224)
chr3 (194-244)||(9465076-9465126)
chr3 (192-294)||(19649622-19649724)
chr3 (222-272)||(42152474-42152524)
chr3 (219-269)||(44664212-44664262)
chr3 (186-244)||(51698111-51698169)
chr3 (187-244)||(6086899-6086956)
chr3 (219-284)||(13356787-13356852)
chr3 (193-254)||(25113353-25113414)
chr3 (200-296)||(36191485-36191584)
chr3 (192-244)||(9440131-9440183)
chr3 (192-244)||(14768191-14768243)
chr3 (206-254)||(19649596-19649644)
chr3 (210-254)||(25910274-25910318)
chr3 (192-244)||(26123083-26123135)
chr3 (219-267)||(34269308-34269356)
chr3 (192-244)||(40214903-40214955)
chr3 (192-243)||(2544440-2544491)
chr3 (192-251)||(51516961-51517019)
chr3 (235-294)||(51980434-51980493)
chr3 (206-244)||(335392-335430)
chr3 (193-251)||(5177851-5177909)
chr3 (224-324)||(19899646-19899748)
chr3 (206-244)||(23825242-23825280)
chr3 (186-244)||(26999114-26999172)
chr3 (192-294)||(36985159-36985261)
chr3 (192-294)||(37010598-37010700)
chr3 (210-291)||(40460366-40460448)
chr3 (186-244)||(42605824-42605882)
chr3 (206-244)||(44593218-44593256)
chr3 (193-254)||(6086984-6087045)
chr3 (193-254)||(8243765-8243826)
chr3 (193-254)||(9440211-9440272)
chr3 (193-254)||(10049672-10049733)
chr3 (187-244)||(10049761-10049818)
chr3 (193-254)||(13826195-13826256)
chr3 (193-254)||(18765262-18765323)
chr3 (220-253)||(35239680-35239713)
chr3 (186-250)||(8266318-8266382)
chr3 (194-254)||(12747780-12747840)
chr3 (186-254)||(18765341-18765409)
chr3 (192-244)||(21653347-21653399)
chr3 (260-296)||(25313319-25313355)
chr3 (192-244)||(28564938-28564990)
chr3 (222-254)||(31836490-31836522)
chr3 (186-254)||(48593225-48593293)
chr3 (206-254)||(55139190-55139238)
[»] chr4 (84 HSPs)
chr4 (186-324)||(37895268-37895406)
chr4 (187-324)||(54864062-54864199)
chr4 (187-324)||(35877312-35877449)
chr4 (193-324)||(43141779-43141910)
chr4 (186-324)||(36196378-36196516)
chr4 (192-296)||(8347533-8347637)
chr4 (193-323)||(50511259-50511389)
chr4 (224-296)||(25874735-25874807)
chr4 (192-324)||(33615782-33615914)
chr4 (186-324)||(33622893-33623031)
chr4 (194-324)||(54673315-54673445)
chr4 (187-324)||(29686413-29686550)
chr4 (193-323)||(35929014-35929143)
chr4 (192-324)||(43556704-43556837)
chr4 (188-324)||(4418096-4418232)
chr4 (210-293)||(50511471-50511554)
chr4 (196-295)||(52966437-52966536)
chr4 (193-324)||(32193488-32193619)
chr4 (192-281)||(24100762-24100851)
chr4 (187-324)||(25756725-25756862)
chr4 (219-294)||(1140895-1140970)
chr4 (210-294)||(52278008-52278094)
chr4 (187-254)||(53225727-53225794)
chr4 (210-296)||(31853088-31853174)
chr4 (237-294)||(1205130-1205187)
chr4 (194-323)||(19350626-19350753)
chr4 (222-294)||(40592755-40592827)
chr4 (186-294)||(48361049-48361157)
chr4 (220-296)||(56491113-56491189)
chr4 (193-324)||(27587259-27587390)
chr4 (199-296)||(52136740-52136837)
chr4 (219-324)||(28460776-28460881)
chr4 (194-285)||(42159978-42160069)
chr4 (188-251)||(43020755-43020818)
chr4 (210-272)||(22210810-22210872)
chr4 (192-286)||(44111796-44111890)
chr4 (187-244)||(2385193-2385250)
chr4 (219-296)||(9813497-9813574)
chr4 (186-255)||(42169125-42169194)
chr4 (210-294)||(8347666-8347750)
chr4 (187-254)||(6246691-6246758)
chr4 (192-251)||(19150661-19150720)
chr4 (210-253)||(21554192-21554235)
chr4 (186-244)||(4758774-4758832)
chr4 (193-251)||(20459326-20459384)
chr4 (192-254)||(28020560-28020622)
chr4 (193-279)||(41116566-41116652)
chr4 (193-251)||(42804260-42804318)
chr4 (192-254)||(45828498-45828560)
chr4 (193-251)||(47866040-47866098)
chr4 (212-294)||(47943750-47943832)
chr4 (193-254)||(16412238-16412299)
chr4 (195-244)||(31854385-31854434)
chr4 (254-295)||(38208314-38208355)
chr4 (187-244)||(53621326-53621383)
chr4 (210-286)||(4386157-4386233)
chr4 (200-252)||(24100889-24100941)
chr4 (210-294)||(30191917-30192001)
chr4 (210-294)||(36132678-36132762)
chr4 (192-244)||(38687914-38687966)
chr4 (186-254)||(38687994-38688062)
chr4 (222-254)||(39993121-39993153)
chr4 (185-252)||(4698619-4698686)
chr4 (194-237)||(9894630-9894673)
chr4 (193-244)||(20688509-20688560)
chr4 (193-244)||(55292116-55292167)
chr4 (192-294)||(696393-696495)
chr4 (192-294)||(764691-764793)
chr4 (193-291)||(23558952-23559050)
chr4 (194-244)||(32517775-32517825)
chr4 (186-244)||(36099580-36099638)
chr4 (266-324)||(1100909-1100967)
chr4 (193-254)||(18135396-18135457)
chr4 (187-244)||(19485665-19485722)
chr4 (217-294)||(22019977-22020054)
chr4 (187-244)||(31227364-31227421)
chr4 (206-255)||(36866870-36866919)
chr4 (210-291)||(43117900-43117981)
chr4 (193-254)||(53621411-53621472)
chr4 (187-251)||(2643606-2643670)
chr4 (195-251)||(20745417-20745473)
chr4 (186-238)||(29686397-29686449)
chr4 (194-254)||(29833270-29833330)
chr4 (210-254)||(56216317-56216361)
[»] chr8 (73 HSPs)
chr8 (186-324)||(34604778-34604916)
chr8 (187-324)||(13831888-13832025)
chr8 (186-324)||(43932062-43932200)
chr8 (199-324)||(29690446-29690571)
chr8 (187-324)||(35583881-35584018)
chr8 (192-324)||(45372708-45372840)
chr8 (187-324)||(7548510-7548648)
chr8 (186-291)||(44579939-44580044)
chr8 (187-324)||(43292566-43292703)
chr8 (186-294)||(34745254-34745362)
chr8 (194-324)||(24599674-24599804)
chr8 (186-294)||(7693076-7693184)
chr8 (203-295)||(38298543-38298635)
chr8 (197-279)||(9633089-9633171)
chr8 (186-296)||(43409875-43409985)
chr8 (186-294)||(9550152-9550260)
chr8 (197-291)||(5356801-5356895)
chr8 (193-251)||(10839767-10839825)
chr8 (187-244)||(2339383-2339440)
chr8 (238-295)||(40645752-40645809)
chr8 (210-294)||(10184594-10184678)
chr8 (192-252)||(24822808-24822868)
chr8 (193-245)||(32575175-32575227)
chr8 (187-287)||(35794576-35794676)
chr8 (225-296)||(41624779-41624850)
chr8 (212-294)||(3236353-3236435)
chr8 (186-244)||(34028476-34028534)
chr8 (193-251)||(35011216-35011274)
chr8 (185-254)||(22781878-22781947)
chr8 (193-254)||(25848050-25848111)
chr8 (222-295)||(27988117-27988190)
chr8 (222-295)||(28045419-28045492)
chr8 (210-324)||(38494260-38494374)
chr8 (187-244)||(41915687-41915744)
chr8 (261-323)||(45180111-45180173)
chr8 (186-294)||(1223120-1223228)
chr8 (213-281)||(34711105-34711173)
chr8 (195-251)||(44796348-44796404)
chr8 (192-244)||(45145958-45146010)
chr8 (227-294)||(9420630-9420697)
chr8 (197-244)||(11293195-11293242)
chr8 (193-244)||(29563751-29563802)
chr8 (193-244)||(30923925-30923976)
chr8 (213-252)||(42123051-42123090)
chr8 (193-244)||(43135137-43135188)
chr8 (186-244)||(2229067-2229125)
chr8 (224-254)||(5311405-5311435)
chr8 (193-251)||(22429539-22429597)
chr8 (193-251)||(24177976-24178034)
chr8 (193-251)||(36366110-36366168)
chr8 (186-244)||(40465235-40465293)
chr8 (186-248)||(43332557-43332619)
chr8 (210-255)||(883700-883745)
chr8 (193-254)||(2229153-2229214)
chr8 (193-294)||(5031468-5031569)
chr8 (210-251)||(12958797-12958838)
chr8 (213-254)||(13831443-13831484)
chr8 (223-252)||(27871021-27871050)
chr8 (223-252)||(27976807-27976836)
chr8 (223-252)||(28034076-28034105)
chr8 (210-251)||(42786385-42786426)
chr8 (210-254)||(195676-195720)
chr8 (210-254)||(310513-310557)
chr8 (222-254)||(9503621-9503653)
chr8 (224-294)||(10107311-10107377)
chr8 (204-252)||(11322574-11322621)
chr8 (220-252)||(14113294-14113326)
chr8 (192-232)||(27793302-27793342)
chr8 (222-254)||(30857258-30857290)
chr8 (192-252)||(35149753-35149813)
chr8 (214-254)||(38414305-38414345)
chr8 (192-244)||(41569099-41569151)
chr8 (186-238)||(43932046-43932098)
[»] chr7 (64 HSPs)
chr7 (186-324)||(41487788-41487926)
chr7 (188-324)||(29559450-29559586)
chr7 (192-324)||(41088855-41088987)
chr7 (197-294)||(41395705-41395802)
chr7 (187-324)||(47484034-47484171)
chr7 (186-285)||(12806905-12807004)
chr7 (192-294)||(45123248-45123350)
chr7 (219-324)||(22618193-22618298)
chr7 (192-295)||(18064725-18064828)
chr7 (192-324)||(27320297-27320429)
chr7 (219-294)||(7456462-7456537)
chr7 (213-295)||(47280215-47280297)
chr7 (192-285)||(40198607-40198700)
chr7 (192-324)||(10674126-10674258)
chr7 (192-281)||(13860273-13860362)
chr7 (195-323)||(37006470-37006599)
chr7 (220-296)||(47612321-47612397)
chr7 (192-324)||(24164519-24164651)
chr7 (219-321)||(39413858-39413960)
chr7 (219-324)||(14543298-14543403)
chr7 (194-294)||(45025599-45025699)
chr7 (219-296)||(7999489-7999566)
chr7 (186-291)||(28248428-28248533)
chr7 (187-251)||(2523856-2523920)
chr7 (192-252)||(10007661-10007721)
chr7 (231-324)||(40234779-40234872)
chr7 (192-294)||(33901041-33901143)
chr7 (193-252)||(7107715-7107774)
chr7 (187-254)||(23248666-23248733)
chr7 (198-324)||(3633204-3633330)
chr7 (187-244)||(20397908-20397965)
chr7 (222-291)||(29835130-29835199)
chr7 (224-281)||(31903006-31903063)
chr7 (238-324)||(33039573-33039659)
chr7 (210-254)||(29365704-29365748)
chr7 (210-254)||(41850617-41850661)
chr7 (197-252)||(24932391-24932446)
chr7 (193-251)||(27231919-27231977)
chr7 (192-254)||(34281672-34281734)
chr7 (192-294)||(36245419-36245521)
chr7 (210-252)||(48082820-48082862)
chr7 (192-245)||(13807245-13807298)
chr7 (195-252)||(18672177-18672234)
chr7 (210-294)||(34117982-34118066)
chr7 (219-254)||(28936084-28936119)
chr7 (193-251)||(4826766-4826824)
chr7 (194-252)||(7456424-7456482)
chr7 (186-244)||(12763322-12763380)
chr7 (222-252)||(17801463-17801493)
chr7 (192-294)||(28677360-28677462)
chr7 (216-254)||(46449805-46449843)
chr7 (187-244)||(5347721-5347778)
chr7 (197-294)||(8566124-8566221)
chr7 (219-252)||(16861542-16861575)
chr7 (187-252)||(34840608-34840673)
chr7 (211-251)||(1366680-1366720)
chr7 (192-252)||(21857068-21857128)
chr7 (186-254)||(28677314-28677382)
chr7 (210-254)||(30823730-30823774)
chr7 (186-254)||(36245373-36245441)
chr7 (192-252)||(40142858-40142918)
chr7 (222-254)||(40362003-40362035)
chr7 (219-267)||(40599952-40600000)
chr7 (210-294)||(45533251-45533335)
[»] chr5 (62 HSPs)
chr5 (193-324)||(20502091-20502222)
chr5 (187-324)||(29451891-29452027)
chr5 (192-324)||(38978745-38978877)
chr5 (193-324)||(29874330-29874461)
chr5 (193-296)||(33247333-33247435)
chr5 (186-324)||(7537018-7537156)
chr5 (186-285)||(19211277-19211376)
chr5 (187-323)||(35204922-35205057)
chr5 (187-323)||(35212102-35212237)
chr5 (192-294)||(32455182-32455284)
chr5 (198-295)||(24173462-24173559)
chr5 (199-320)||(29002759-29002880)
chr5 (191-291)||(33970703-33970803)
chr5 (192-324)||(9630248-9630380)
chr5 (192-324)||(13932464-13932596)
chr5 (192-324)||(27600762-27600893)
chr5 (210-295)||(5355572-5355657)
chr5 (187-251)||(13789818-13789882)
chr5 (186-254)||(26898274-26898342)
chr5 (187-294)||(29299355-29299462)
chr5 (192-251)||(38394431-38394490)
chr5 (197-290)||(35318561-35318654)
chr5 (187-324)||(73797-73934)
chr5 (187-251)||(3814057-3814121)
chr5 (192-244)||(31802961-31803013)
chr5 (193-252)||(15968315-15968374)
chr5 (193-251)||(22731344-22731402)
chr5 (186-244)||(25027787-25027845)
chr5 (186-244)||(29374263-29374321)
chr5 (187-244)||(903964-904021)
chr5 (195-244)||(9601599-9601648)
chr5 (186-291)||(13278883-13278988)
chr5 (222-254)||(892580-892612)
chr5 (192-287)||(11931972-11932068)
chr5 (222-254)||(22398124-22398156)
chr5 (192-244)||(37699783-37699835)
chr5 (192-244)||(41815278-41815330)
chr5 (194-254)||(42311815-42311875)
chr5 (197-244)||(7750011-7750058)
chr5 (193-252)||(14338900-14338959)
chr5 (192-251)||(29031122-29031181)
chr5 (186-244)||(1015248-1015306)
chr5 (186-244)||(13144973-13145031)
chr5 (206-244)||(15569348-15569386)
chr5 (213-251)||(19296044-19296082)
chr5 (192-254)||(31803041-31803103)
chr5 (186-244)||(36417044-36417102)
chr5 (186-244)||(36418982-36419040)
chr5 (231-288)||(579661-579718)
chr5 (193-238)||(13278985-13279030)
chr5 (193-254)||(25027698-25027759)
chr5 (186-238)||(32455138-32455188)
chr5 (187-244)||(41989657-41989714)
chr5 (194-254)||(1138223-1138283)
chr5 (192-240)||(2959242-2959290)
chr5 (192-240)||(2967711-2967759)
chr5 (192-252)||(5240225-5240285)
chr5 (210-254)||(6604405-6604449)
chr5 (186-254)||(7945834-7945902)
chr5 (210-254)||(8235460-8235504)
chr5 (222-290)||(13128226-13128294)
chr5 (192-244)||(21090379-21090431)
[»] chr2 (69 HSPs)
chr2 (186-324)||(15239705-15239843)
chr2 (186-296)||(28143786-28143896)
chr2 (186-324)||(45076339-45076477)
chr2 (187-324)||(40534526-40534663)
chr2 (186-295)||(36103435-36103544)
chr2 (187-324)||(25795251-25795388)
chr2 (196-296)||(23464537-23464638)
chr2 (210-323)||(27306732-27306843)
chr2 (192-324)||(27311590-27311722)
chr2 (200-296)||(3365316-3365412)
chr2 (198-324)||(6971579-6971705)
chr2 (210-285)||(9373446-9373521)
chr2 (187-294)||(12873721-12873828)
chr2 (219-296)||(41464744-41464821)
chr2 (187-294)||(41153154-41153261)
chr2 (210-291)||(11687521-11687602)
chr2 (194-254)||(5109368-5109428)
chr2 (210-294)||(12962726-12962810)
chr2 (210-254)||(28249016-28249060)
chr2 (187-254)||(12486075-12486142)
chr2 (186-244)||(7765791-7765849)
chr2 (186-244)||(32750339-32750397)
chr2 (213-291)||(4410823-4410901)
chr2 (186-244)||(29866175-29866233)
chr2 (189-251)||(38554544-38554606)
chr2 (193-251)||(45034402-45034460)
chr2 (187-244)||(6761558-6761615)
chr2 (196-269)||(6971503-6971576)
chr2 (192-252)||(7943524-7943585)
chr2 (187-252)||(9152464-9152529)
chr2 (187-248)||(22333614-22333675)
chr2 (210-295)||(38448980-38449065)
chr2 (186-254)||(9152376-9152444)
chr2 (222-294)||(10204959-10205031)
chr2 (192-244)||(16241270-16241322)
chr2 (210-294)||(32457256-32457340)
chr2 (192-252)||(36881536-36881596)
chr2 (193-244)||(32197469-32197520)
chr2 (187-254)||(42263468-42263535)
chr2 (200-247)||(44283623-44283670)
chr2 (206-244)||(11363015-11363053)
chr2 (186-244)||(13775804-13775862)
chr2 (206-244)||(43657942-43657980)
chr2 (186-244)||(44737280-44737338)
chr2 (193-251)||(45571034-45571092)
chr2 (193-251)||(45574701-45574759)
chr2 (193-251)||(45578368-45578426)
chr2 (193-251)||(45582035-45582093)
chr2 (193-251)||(45585702-45585760)
chr2 (193-251)||(45589369-45589427)
chr2 (193-251)||(45593036-45593094)
chr2 (193-251)||(45596703-45596761)
chr2 (193-251)||(45600370-45600428)
chr2 (193-251)||(45604037-45604095)
chr2 (193-251)||(45607704-45607762)
chr2 (193-251)||(45611371-45611429)
chr2 (193-251)||(45615038-45615096)
chr2 (210-251)||(5559384-5559425)
chr2 (193-254)||(6761469-6761530)
chr2 (210-251)||(11794470-11794511)
chr2 (193-254)||(16241350-16241411)
chr2 (207-252)||(22857822-22857867)
chr2 (193-254)||(25892027-25892088)
chr2 (210-255)||(39445016-39445061)
chr2 (193-254)||(44737365-44737426)
chr2 (224-252)||(9114001-9114029)
chr2 (192-244)||(20360537-20360589)
chr2 (192-252)||(34447588-34447648)
chr2 (186-254)||(42263553-42263621)
[»] chr6 (36 HSPs)
chr6 (186-296)||(30438740-30438850)
chr6 (186-296)||(12217532-12217643)
chr6 (186-324)||(28605583-28605721)
chr6 (192-285)||(12605662-12605755)
chr6 (187-324)||(2913331-2913468)
chr6 (192-287)||(10145265-10145360)
chr6 (210-279)||(9343141-9343210)
chr6 (199-295)||(359587-359683)
chr6 (200-284)||(3847461-3847545)
chr6 (232-295)||(8265015-8265078)
chr6 (210-281)||(33127842-33127913)
chr6 (226-296)||(29284539-29284609)
chr6 (187-252)||(2230434-2230499)
chr6 (222-294)||(12450384-12450456)
chr6 (193-251)||(17598115-17598173)
chr6 (186-244)||(24949628-24949686)
chr6 (186-244)||(31971027-31971085)
chr6 (187-244)||(885600-885657)
chr6 (209-254)||(5483944-5483989)
chr6 (222-253)||(1158278-1158309)
chr6 (219-254)||(7257413-7257448)
chr6 (224-295)||(33128860-33128931)
chr6 (186-252)||(2913418-2913484)
chr6 (186-244)||(7405537-7405595)
chr6 (206-252)||(8030172-8030218)
chr6 (192-238)||(23916226-23916272)
chr6 (224-290)||(26484331-26484397)
chr6 (192-254)||(27909058-27909120)
chr6 (193-294)||(33119947-33120046)
chr6 (186-244)||(33859583-33859641)
chr6 (187-244)||(6047794-6047851)
chr6 (187-244)||(8558912-8558969)
chr6 (206-254)||(1158328-1158376)
chr6 (210-294)||(2972185-2972269)
chr6 (210-294)||(3064904-3064988)
chr6 (192-244)||(17225246-17225298)
[»] chr1 (63 HSPs)
chr1 (186-324)||(15699461-15699599)
chr1 (192-296)||(52279275-52279379)
chr1 (186-324)||(19998408-19998546)
chr1 (192-324)||(31050253-31050385)
chr1 (213-296)||(44224293-44224376)
chr1 (210-324)||(45977107-45977221)
chr1 (207-276)||(32837654-32837723)
chr1 (219-295)||(29438168-29438244)
chr1 (200-295)||(27687883-27687978)
chr1 (187-294)||(51590428-51590535)
chr1 (221-291)||(13770741-13770811)
chr1 (192-291)||(13320349-13320448)
chr1 (219-324)||(34174899-34175004)
chr1 (192-324)||(13321717-13321849)
chr1 (193-250)||(29256685-29256742)
chr1 (193-254)||(50155381-50155442)
chr1 (222-281)||(12175507-12175566)
chr1 (239-294)||(29064192-29064247)
chr1 (195-294)||(49944839-49944938)
chr1 (194-244)||(33325426-33325476)
chr1 (186-251)||(26924210-26924275)
chr1 (210-294)||(640543-640626)
chr1 (186-238)||(51590529-51590581)
chr1 (210-245)||(18744580-18744615)
chr1 (192-291)||(22182811-22182910)
chr1 (193-252)||(38040361-38040420)
chr1 (193-251)||(43929431-43929489)
chr1 (187-244)||(2352402-2352459)
chr1 (187-244)||(2961102-2961159)
chr1 (210-295)||(48565548-48565633)
chr1 (210-294)||(15342958-15343042)
chr1 (186-294)||(18038685-18038793)
chr1 (224-296)||(20486692-20486764)
chr1 (186-254)||(26924296-26924364)
chr1 (210-254)||(34146887-34146931)
chr1 (210-294)||(34332497-34332581)
chr1 (193-244)||(26545090-26545141)
chr1 (193-244)||(26550291-26550342)
chr1 (195-254)||(28359005-28359064)
chr1 (210-252)||(7375554-7375596)
chr1 (206-244)||(15289866-15289904)
chr1 (210-252)||(23923571-23923613)
chr1 (220-254)||(25021262-25021296)
chr1 (206-252)||(25021316-25021362)
chr1 (187-261)||(25238649-25238723)
chr1 (187-252)||(5368855-5368920)
chr1 (210-251)||(6793615-6793656)
chr1 (193-254)||(9548676-9548737)
chr1 (187-240)||(9548769-9548822)
chr1 (187-244)||(10065253-10065310)
chr1 (193-254)||(14281594-14281655)
chr1 (185-238)||(18038787-18038840)
chr1 (186-251)||(26760259-26760324)
chr1 (206-255)||(27819394-27819443)
chr1 (193-254)||(38830487-38830548)
chr1 (228-285)||(43851001-43851058)
chr1 (195-252)||(47946007-47946064)
chr1 (242-324)||(52030881-52030963)
chr1 (192-244)||(28989365-28989417)
chr1 (186-254)||(34332559-34332627)
chr1 (196-252)||(38738016-38738072)
chr1 (192-244)||(38830576-38830628)
chr1 (210-294)||(44939109-44939193)
[»] scaffold0767 (1 HSPs)
scaffold0767 (187-327)||(3807-3947)
[»] scaffold0110 (2 HSPs)
scaffold0110 (186-296)||(40232-40342)
scaffold0110 (186-253)||(1616-1683)
[»] scaffold0059 (1 HSPs)
scaffold0059 (187-296)||(26627-26736)
[»] scaffold0200 (1 HSPs)
scaffold0200 (193-296)||(25655-25759)
[»] scaffold0023 (1 HSPs)
scaffold0023 (187-324)||(112836-112973)
[»] scaffold0533 (1 HSPs)
scaffold0533 (196-324)||(3253-3381)
[»] scaffold0015 (1 HSPs)
scaffold0015 (192-287)||(17388-17483)
[»] scaffold0027 (1 HSPs)
scaffold0027 (210-294)||(5457-5541)
[»] scaffold0176 (1 HSPs)
scaffold0176 (200-285)||(19308-19390)
[»] scaffold0287 (1 HSPs)
scaffold0287 (198-324)||(12755-12881)
[»] scaffold0460 (2 HSPs)
scaffold0460 (224-296)||(12248-12320)
scaffold0460 (224-296)||(7681-7753)
[»] scaffold0221 (2 HSPs)
scaffold0221 (192-244)||(11123-11175)
scaffold0221 (186-254)||(11027-11095)
[»] scaffold0123 (2 HSPs)
scaffold0123 (193-244)||(29337-29388)
scaffold0123 (192-254)||(29247-29309)
[»] scaffold2107 (1 HSPs)
scaffold2107 (186-244)||(536-594)
[»] scaffold0028 (1 HSPs)
scaffold0028 (213-294)||(71892-71973)
[»] scaffold0007 (1 HSPs)
scaffold0007 (192-252)||(77348-77408)
[»] scaffold0002 (3 HSPs)
scaffold0002 (187-254)||(492303-492370)
scaffold0002 (219-253)||(423332-423366)
scaffold0002 (186-254)||(492388-492456)
[»] scaffold0592 (1 HSPs)
scaffold0592 (186-244)||(472-530)
[»] scaffold0242 (1 HSPs)
scaffold0242 (193-251)||(16511-16569)
[»] scaffold0024 (2 HSPs)
scaffold0024 (186-255)||(35951-36020)
scaffold0024 (192-244)||(36047-36099)
[»] scaffold0144 (1 HSPs)
scaffold0144 (194-254)||(38830-38890)


Alignment Details
Target: chr3 (Bit Score: 135; Significance: 3e-70; HSPs: 80)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 32 - 189
Target Start/End: Complemental strand, 25391403 - 25391243
Alignment:
Q  32 gttatttggaccacacatt---catgacaataatattggatatttccacctttcacagtatttatactggtgaacaatgcctttttggttgcatgtttta 128  Q
    |||||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  25391403 gttatttggaccacacattattcatgacaataatattggatatttccacctttcacagtatttatactggtgaacaatgcatttttggttgcatgtttta 25391304  T
Q  129 ttcaaggtaaaaattttgtggttaatgaaattgtgaaattcaacaataacacaactcaata 189  Q
    ||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||    
T  25391303 ttcaaggtaaaaattctgtggttaatgaaatagtgaaattcaacaataacacaactcaata 25391243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 187 - 324
Target Start/End: Complemental strand, 45113884 - 45113747
Alignment:
Q  187 ataccccctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcacttat 286  Q
    |||| ||||||||||||| ||| ||||||||||||||||||||| ||||| ||||||||||||||| ||||||||||||||||||||||||||||||||     
T  45113884 atactccctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgtatcttattgtaaatatagactagatacatcacttac 45113785  T
Q  287 acaatgaaccnnnnnnntcaattgtttcttataataag 324  Q
    ||||||||||       |||||||||||||||||||||    
T  45113784 acaatgaaccaaaaaaatcaattgtttcttataataag 45113747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 193 - 296
Target Start/End: Complemental strand, 27302223 - 27302120
Alignment:
Q  193 cctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcacttatacaatg 292  Q
    ||||||||| || ||| ||||||||||||||||||||| ||||| ||||||||||||||| | |||||||||||||||||||||||||||||||||||||    
T  27302223 cctccggtctttattataagaaaaagttgactttttaggttcatagaataattaatgtatctaattgtaaatatagactagatacatcacttatacaatg 27302124  T
Q  293 aacc 296  Q
    ||||    
T  27302123 aacc 27302120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 198 - 324
Target Start/End: Original strand, 53284325 - 53284451
Alignment:
Q  198 ggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcacttatacaatgaaccn 297  Q
    ||||||| ||| ||||||||||||| ||||||| |||||  |||||||||||||| ||||||||||| |||||||||||||||||||||||||| ||||     
T  53284325 ggtccttattataagaaaaagttgattttttagtttcataaaataattaatgtatcttattgtaaatgtagactagatacatcacttatacaataaacca 53284424  T
Q  298 nnnnnntcaattgtttcttataataag 324  Q
          |||||||||||||||||||||    
T  53284425 aaaaaatcaattgtttcttataataag 53284451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 192 - 324
Target Start/End: Complemental strand, 48643749 - 48643617
Alignment:
Q  192 ccctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcacttatacaat 291  Q
    |||||| |||||| |||||||||| | ||||||||||||||||||||||||||||||||||||  || |||||||||||||||||||| ||||| || ||    
T  48643749 ccctccagtccttattacaagaaacaattgactttttagattcattgaataattaatgtatttcgttataaatatagactagatacattacttacacgat 48643650  T
Q  292 gaaccnnnnnnntcaattgtttcttataataag 324  Q
     ||||       |||||||||||||||||||||    
T  48643649 taacctaaaaagtcaattgtttcttataataag 48643617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 186 - 324
Target Start/End: Complemental strand, 39617062 - 39616924
Alignment:
Q  186 aataccccctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcactta 285  Q
    ||||| ||||||||||||| |||||||||| | |||||||||| | ||||| ||||||||||||||| || || ||||||||||||||||||||||||||    
T  39617062 aatactccctccggtccttattacaagaaacaattgacttttttggttcatagaataattaatgtatcttgttataaatatagactagatacatcactta 39616963  T
Q  286 tacaatgaaccnnnnnnntcaattgtttcttataataag 324  Q
     | ||||||||       |||| ||||||||||||||||    
T  39616962 cataatgaaccttaaaagtcaaatgtttcttataataag 39616924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 187 - 324
Target Start/End: Complemental strand, 31376325 - 31376188
Alignment:
Q  187 ataccccctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcacttat 286  Q
    |||| ||||||||||||| |||||||||| | |||||||||| | ||||| ||||||||||||||| || || ||||||||||||||||||||||||||     
T  31376325 atactccctccggtccttattacaagaaacaattgacttttttggttcatagaataattaatgtatcttcttataaatatagactagatacatcacttac 31376226  T
Q  287 acaatgaaccnnnnnnntcaattgtttcttataataag 324  Q
    | ||||||||       |||| ||||||||||||||||    
T  31376225 ataatgaacctaaaaagtcaaatgtttcttataataag 31376188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 186 - 296
Target Start/End: Original strand, 53703727 - 53703837
Alignment:
Q  186 aataccccctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcactta 285  Q
    ||||| ||||||||||||| ||| |||||| | |||||||||| | ||||| ||||||||||||||| || || ||||||||||||||||||||||||||    
T  53703727 aatactccctccggtccttattataagaaacaattgacttttttggttcatagaataattaatgtatcttgttataaatatagactagatacatcactta 53703826  T
Q  286 tacaatgaacc 296  Q
     ||||||||||    
T  53703827 cacaatgaacc 53703837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 212 - 324
Target Start/End: Original strand, 43901604 - 43901716
Alignment:
Q  212 gaaaaagttgactttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcacttatacaatgaaccnnnnnnntcaattgt 311  Q
    ||||||||||||||||||| ||||| ||||||||||||||| |||||| ||||||||||||| ||||||| ||| ||||||||||       | ||||||    
T  43901604 gaaaaagttgactttttaggttcatagaataattaatgtatcttattgaaaatatagactaggtacatcatttacacaatgaaccaaaaaagttaattgt 43901703  T
Q  312 ttcttataataag 324  Q
    |||||||||||||    
T  43901704 ttcttataataag 43901716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 195 - 318
Target Start/End: Original strand, 21944295 - 21944418
Alignment:
Q  195 tccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcacttatacaatgaa 294  Q
    |||||||||| ||| |||||||| |||||||||||| ||||| ||||||||||||||| ||| |||| |||||||||||||||| |||||| |||| |||    
T  21944295 tccggtccttattataagaaaaaattgactttttaggttcatagaataattaatgtatcttagtgtagatatagactagatacaccacttacacaaggaa 21944394  T
Q  295 ccnnnnnnntcaattgtttcttat 318  Q
    ||       |||||||||||||||    
T  21944395 ccaaaaaaatcaattgtttcttat 21944418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 193 - 296
Target Start/End: Original strand, 16123761 - 16123863
Alignment:
Q  193 cctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcacttatacaatg 292  Q
    |||||||||||| ||| |||||||| ||||||||| || || ||  |||||||||| ||| |||||||||||||||||||||||||| ||||||||||||    
T  16123761 cctccggtccttattataagaaaaaattgactttt-aggtttataaaataattaatatatcttattgtaaatatagactagatacattacttatacaatg 16123859  T
Q  293 aacc 296  Q
    ||||    
T  16123860 aacc 16123863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 186 - 324
Target Start/End: Complemental strand, 50100346 - 50100207
Alignment:
Q  186 aataccccctccggtccttgttacaagaaaa-agttgactttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcactt 284  Q
    ||||| ||||||||||||| ||| || |||| | || |||| || ||||||| ||| |||||| |||| ||||| |||||||||||||||||||||||||    
T  50100346 aatactccctccggtccttattataaaaaaataattaacttgtttgattcatagaaaaattaacgtatcttattataaatatagactagatacatcactt 50100247  T
Q  285 atacaatgaaccnnnnnnntcaattgtttcttataataag 324  Q
    |||||||||||        |||||||||||||||||||||    
T  50100246 atacaatgaactaaaaaagtcaattgtttcttataataag 50100207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 193 - 294
Target Start/End: Complemental strand, 44118327 - 44118226
Alignment:
Q  193 cctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcacttatacaatg 292  Q
    |||| ||||||| ||| |||||| | |||||||||||||||||||  ||||||||||||| || || |||||||||||||||||||||| ||| ||||||    
T  44118327 cctctggtccttattataagaaacaattgactttttagattcattatataattaatgtatattgttataaatatagactagatacatcatttacacaatg 44118228  T
Q  293 aa 294  Q
    ||    
T  44118227 aa 44118226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 195 - 279
Target Start/End: Original strand, 46220372 - 46220456
Alignment:
Q  195 tccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtattttattgtaaatatagactagatacat 279  Q
    |||||||||| ||| |||||||| |||| |||||| |||||| ||||||||||||||| |||||||||||||| |||||||||||    
T  46220372 tccggtccttattataagaaaaaattgattttttatattcatagaataattaatgtatcttattgtaaatatatactagatacat 46220456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 194 - 261
Target Start/End: Complemental strand, 50660081 - 50660014
Alignment:
Q  194 ctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtattttattgta 261  Q
    ||||||||||| ||| |||||||||||||||||||||||| || ||||||||||||||| ||||||||    
T  50660081 ctccggtccttattataagaaaaagttgactttttagatttatagaataattaatgtatcttattgta 50660014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 192 - 282
Target Start/End: Complemental strand, 24489457 - 24489368
Alignment:
Q  192 ccctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcac 282  Q
    ||||||| ||||| ||| |||| |||||||| |||||| |||||| ||||||||||||||| |||| ||||||||| ||||||||||||||    
T  24489457 ccctccgatccttattataagacaaagttga-tttttaaattcatagaataattaatgtatcttatagtaaatataaactagatacatcac 24489368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 186 - 251
Target Start/End: Original strand, 21662883 - 21662948
Alignment:
Q  186 aataccccctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgta 251  Q
    ||||| ||||||||||||  ||| |||||||||||||||||||||||||||||| |||||||||||    
T  21662883 aatactccctccggtcctatttataagaaaaagttgactttttagattcattgagtaattaatgta 21662948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 192 - 285
Target Start/End: Complemental strand, 48346595 - 48346502
Alignment:
Q  192 ccctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcactta 285  Q
    ||||||| ||||| ||| ||||||   || |||||||||||||||| | |||||||||||| || || ||||||||||||||||||||||||||    
T  48346595 ccctccgatccttattataagaaactttttactttttagattcattaagtaattaatgtatcttgttataaatatagactagatacatcactta 48346502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 186 - 254
Target Start/End: Original strand, 28406464 - 28406532
Alignment:
Q  186 aataccccctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtattt 254  Q
    ||||| ||||||||||||  |||||||||| | |||||||||||||||| |||||||||||||||||||    
T  28406464 aatactccctccggtcctatttacaagaaacaattgactttttagattcgttgaataattaatgtattt 28406532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 210 - 294
Target Start/End: Original strand, 51723399 - 51723483
Alignment:
Q  210 aagaaaaagttgactttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcacttatacaatgaa 294  Q
    ||||||||||||| |||||||||||||||| |||||||||||||| ||    ||||||||||| ||| |||| ||||||||||||    
T  51723399 aagaaaaagttgattttttagattcattgagtaattaatgtatttgatatagaatatagactaaatatatcatttatacaatgaa 51723483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 192 - 251
Target Start/End: Complemental strand, 53442052 - 53441993
Alignment:
Q  192 ccctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgta 251  Q
    ||||||||||||  ||| |||||||||||||||||||| |||||||||||||||||||||    
T  53442052 ccctccggtcctatttataagaaaaagttgactttttaaattcattgaataattaatgta 53441993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 187 - 281
Target Start/End: Complemental strand, 19227458 - 19227364
Alignment:
Q  187 ataccccctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtattttattgtaaatatagactagatacatca 281  Q
    |||| ||||||||||||| ||| |||||| | |||| ||||| | ||||| ||||||||||| ||| || || ||||||||||||||||||||||    
T  19227458 atactccctccggtccttattataagaaacaattgatttttttggttcatagaataattaatttatcttgttataaatatagactagatacatca 19227364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 222 - 291
Target Start/End: Original strand, 6061115 - 6061184
Alignment:
Q  222 actttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcacttatacaat 291  Q
    ||||||||||||||| |||||||||||| ||||  || |||||||| ||||||||||||||||| |||||    
T  6061115 actttttagattcatagaataattaatgcatttcgttataaatatatactagatacatcacttacacaat 6061184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 222 - 324
Target Start/End: Original strand, 2544491 - 2544594
Alignment:
Q  222 actttttagattcattgaataattaatgtattttattgtaaa-tatagactagatacatcacttatacaatgaaccnnnnnnntcaattgtttcttataa 320  Q
    ||||||||| |||||||||||||| |||||| || || |||| ||||||| | ||||||||||||||||||||| |       ||||||||||||| |||    
T  2544491 actttttaggttcattgaataattgatgtatcttgttataaattatagaccaaatacatcacttatacaatgaatctaaaaagtcaattgtttcttgtaa 2544590  T
Q  321 taag 324  Q
    ||||    
T  2544591 taag 2544594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 192 - 254
Target Start/End: Complemental strand, 2544604 - 2544542
Alignment:
Q  192 ccctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtattt 254  Q
    ||||||||||||| |||||||||| | |||||||||||||||||||| |||| | ||||||||    
T  2544604 ccctccggtccttattacaagaaacaattgactttttagattcattgtataagtgatgtattt 2544542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 187 - 251
Target Start/End: Complemental strand, 28406617 - 28406553
Alignment:
Q  187 ataccccctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgta 251  Q
    |||| ||||||||||||  |||||||||| | |||||||||||| |||||||||||||| |||||    
T  28406617 atactccctccggtcctatttacaagaaacaattgactttttaggttcattgaataatttatgta 28406553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 210 - 294
Target Start/End: Original strand, 44518057 - 44518141
Alignment:
Q  210 aagaaaaagttgactttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcacttatacaatgaa 294  Q
    |||||||  ||||||||||||||||||||| |||||||||||| || |   |||||||||| | |||||||| ||| ||||||||    
T  44518057 aagaaaactttgactttttagattcattgagtaattaatgtatcttgtctaaaatatagaccaaatacatcatttagacaatgaa 44518141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 210 - 294
Target Start/End: Original strand, 45746492 - 45746576
Alignment:
Q  210 aagaaaaagttgactttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcacttatacaatgaa 294  Q
    |||||| | |||| |||||||||| |||||||||||||| ||| |  || |||||||||||||||| ||||||||| ||| ||||    
T  45746492 aagaaacaattgattttttagatttattgaataattaatatatctcgttataaatatagactagatccatcacttacacattgaa 45746576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 232 - 291
Target Start/End: Original strand, 8764275 - 8764334
Alignment:
Q  232 ttcattgaataattaatgtattttattgtaaatatagactagatacatcacttatacaat 291  Q
    ||||| ||||||||||||||| || || |||||||||| ||||||||||||||| |||||    
T  8764275 ttcatagaataattaatgtatcttgttataaatatagattagatacatcacttacacaat 8764334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 232 - 295
Target Start/End: Original strand, 8769177 - 8769240
Alignment:
Q  232 ttcattgaataattaatgtattttattgtaaatatagactagatacatcacttatacaatgaac 295  Q
    ||||| |||| |||||||||| || || |||||||||| ||||||||||||||| |||||||||    
T  8769177 ttcatagaatgattaatgtatcttgttataaatatagattagatacatcacttacacaatgaac 8769240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 192 - 243
Target Start/End: Original strand, 19202253 - 19202304
Alignment:
Q  192 ccctccggtccttgttacaagaaaaagttgactttttagattcattgaataa 243  Q
    ||||||||||||  |||||||| |||||||||||||||||| ||||||||||    
T  19202253 ccctccggtcctatttacaagagaaagttgactttttagatacattgaataa 19202304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 222 - 285
Target Start/End: Complemental strand, 27363276 - 27363213
Alignment:
Q  222 actttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcactta 285  Q
    |||||||||||||||| | ||||||| |||| || || |||||||||| |||||||||||||||    
T  27363276 actttttagattcattaagtaattaacgtatcttgttataaatatagattagatacatcactta 27363213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 211 - 294
Target Start/End: Original strand, 52864973 - 52865056
Alignment:
Q  211 agaaaaagttgactttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcacttatacaatgaa 294  Q
    ||||||| || |||||||||||||||||| ||||| |||||| ||||   |||||||||||| ||| |||| |||| |||||||    
T  52864973 agaaaaatttaactttttagattcattgagtaattgatgtatcttatctaaaatatagactaaatatatcatttatgcaatgaa 52865056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 186 - 252
Target Start/End: Complemental strand, 379224 - 379158
Alignment:
Q  186 aataccccctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtat 252  Q
    ||||| || |||||||||  ||| |||| |||||||||||||||||| |||||||||||| ||||||    
T  379224 aatactccttccggtcctatttataagagaaagttgactttttagatacattgaataatttatgtat 379158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 194 - 244
Target Start/End: Original strand, 9465076 - 9465126
Alignment:
Q  194 ctccggtccttgttacaagaaaaagttgactttttagattcattgaataat 244  Q
    ||||||||||  |||||||| |||||||||||||||||| |||||||||||    
T  9465076 ctccggtcctatttacaagataaagttgactttttagatacattgaataat 9465126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 192 - 294
Target Start/End: Complemental strand, 19649724 - 19649622
Alignment:
Q  192 ccctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcacttatacaat 291  Q
    ||||| ||||||  |||||||||| | |||| |||||||||||||||| ||||| |||||||   |   |||||||||||| |||||||| |||| ||||    
T  19649724 ccctctggtcctatttacaagaaacatttgattttttagattcattgagtaattgatgtattcggtctaaaatatagactaaatacatcaattattcaat 19649625  T
Q  292 gaa 294  Q
    |||    
T  19649624 gaa 19649622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 222 - 272
Target Start/End: Complemental strand, 42152524 - 42152474
Alignment:
Q  222 actttttagattcattgaataattaatgtattttattgtaaatatagacta 272  Q
    |||||||||||| ||||||| ||||||||||||| ||||||||||| ||||    
T  42152524 actttttagatttattgaatgattaatgtattttgttgtaaatataaacta 42152474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 219 - 269
Target Start/End: Original strand, 44664212 - 44664262
Alignment:
Q  219 ttgactttttagattcattgaataattaatgtattttattgtaaatataga 269  Q
    |||| ||||||| ||||||||||||||||||||| ||||| ||||||||||    
T  44664212 ttgattttttaggttcattgaataattaatgtatcttattataaatataga 44664262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 186 - 244
Target Start/End: Original strand, 51698111 - 51698169
Alignment:
Q  186 aataccccctccggtccttgttacaagaaaaagttgactttttagattcattgaataat 244  Q
    ||||| ||||||||||||  |||||||| |||||||||||||||||| |||| ||||||    
T  51698111 aatactccctccggtcctatttacaagagaaagttgactttttagatacattcaataat 51698169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 187 - 244
Target Start/End: Original strand, 6086899 - 6086956
Alignment:
Q  187 ataccccctccggtccttgttacaagaaaaagttgactttttagattcattgaataat 244  Q
    |||| ||||||||||||  |||||||| | |||||||||||||||| |||||||||||    
T  6086899 atactccctccggtcctatttacaagagacagttgactttttagatacattgaataat 6086956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 219 - 284
Target Start/End: Complemental strand, 13356852 - 13356787
Alignment:
Q  219 ttgactttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcactt 284  Q
    ||||||||||| ||||||| ||||| |||||||| |   | |||||||||||||||||||||||||    
T  13356852 ttgactttttaaattcattaaataagtaatgtatctcggtataaatatagactagatacatcactt 13356787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 193 - 254
Target Start/End: Original strand, 25113353 - 25113414
Alignment:
Q  193 cctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtattt 254  Q
    |||||||||||  ||| |||| |||||||||||||||||| |||||||||||  ||||||||    
T  25113353 cctccggtcctatttataagagaaagttgactttttagatacattgaataatgtatgtattt 25113414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 200 - 296
Target Start/End: Original strand, 36191485 - 36191584
Alignment:
Q  200 tccttgttacaagaaaaagttgactttttagattcattgaataat---taatgtattttattgtaaatatagactagatacatcacttatacaatgaacc 296  Q
    ||||| ||| |||||| | |||||||||| | ||||| |||||||   |||||||| || || || ||||||||||||||||||||||| | ||||||||    
T  36191485 tccttattataagaaacaattgacttttttggttcatagaataatgattaatgtatcttgttatatatatagactagatacatcacttacataatgaacc 36191584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 192 - 244
Target Start/End: Original strand, 9440131 - 9440183
Alignment:
Q  192 ccctccggtccttgttacaagaaaaagttgactttttagattcattgaataat 244  Q
    ||||||||||||  |||||||| | |||||||||||||||| |||||||||||    
T  9440131 ccctccggtcctatttacaagagacagttgactttttagatacattgaataat 9440183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 192 - 244
Target Start/End: Complemental strand, 14768243 - 14768191
Alignment:
Q  192 ccctccggtccttgttacaagaaaaagttgactttttagattcattgaataat 244  Q
    ||||||||||||  |||||||| |||||||| ||||||||| |||||||||||    
T  14768243 ccctccggtcctatttacaagagaaagttgattttttagatacattgaataat 14768191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 206 - 254
Target Start/End: Original strand, 19649596 - 19649644
Alignment:
Q  206 ttacaagaaaaagttgactttttagattcattgaataattaatgtattt 254  Q
    |||||||||| | |||||||||| |||||||||||||||| ||||||||    
T  19649596 ttacaagaaacatttgacttttttgattcattgaataattgatgtattt 19649644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 210 - 254
Target Start/End: Complemental strand, 25910318 - 25910274
Alignment:
Q  210 aagaaaaagttgactttttagattcattgaataattaatgtattt 254  Q
    |||||||||||||||||||| ||| ||||| ||||||||||||||    
T  25910318 aagaaaaagttgactttttaaatttattgagtaattaatgtattt 25910274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 192 - 244
Target Start/End: Complemental strand, 26123135 - 26123083
Alignment:
Q  192 ccctccggtccttgttacaagaaaaagttgactttttagattcattgaataat 244  Q
    ||||||||||||  |||||||| |||| ||||||||||||| |||||||||||    
T  26123135 ccctccggtcctatttacaagagaaagatgactttttagatacattgaataat 26123083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 219 - 267
Target Start/End: Complemental strand, 34269356 - 34269308
Alignment:
Q  219 ttgactttttagattcattgaataattaatgtattttattgtaaatata 267  Q
    |||||||||||||||||||||||||||||| |||||  || ||||||||    
T  34269356 ttgactttttagattcattgaataattaatatatttcgttataaatata 34269308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 192 - 244
Target Start/End: Original strand, 40214903 - 40214955
Alignment:
Q  192 ccctccggtccttgttacaagaaaaagttgactttttagattcattgaataat 244  Q
    ||||||||||||  |||||||| |||||||||||||||||| ||||| |||||    
T  40214903 ccctccggtcctatttacaagagaaagttgactttttagatacattggataat 40214955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 192 - 243
Target Start/End: Original strand, 2544440 - 2544491
Alignment:
Q  192 ccctccggtccttgttacaagaaaaagttgactttttagattcattgaataa 243  Q
    ||||||||||||| ||| |||||| | |||||||||||| ||||||||||||    
T  2544440 ccctccggtccttattataagaaacaattgactttttaggttcattgaataa 2544491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 192 - 251
Target Start/End: Original strand, 51516961 - 51517019
Alignment:
Q  192 ccctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgta 251  Q
    ||||||||||||  ||| |||||||||||||||||||||||| || || |||||||||||    
T  51516961 ccctccggtcctatttataagaaaaagttgactttttagatt-atggagtaattaatgta 51517019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 235 - 294
Target Start/End: Original strand, 51980434 - 51980493
Alignment:
Q  235 attgaataattaatgtattttattgtaaatatagactagatacatcacttatacaatgaa 294  Q
    |||||||||||||||||| |  || |||||||| |||||||| |||||||| ||||||||    
T  51980434 attgaataattaatgtatctcgttataaatataaactagatatatcacttacacaatgaa 51980493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 206 - 244
Target Start/End: Original strand, 335392 - 335430
Alignment:
Q  206 ttacaagaaaaagttgactttttagattcattgaataat 244  Q
    |||||||| |||||||||||||||||| |||||||||||    
T  335392 ttacaagagaaagttgactttttagatacattgaataat 335430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 251
Target Start/End: Complemental strand, 5177909 - 5177851
Alignment:
Q  193 cctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgta 251  Q
    |||||||||||  ||| |||||||| || |||||||||||||||| ||||||| |||||    
T  5177909 cctccggtcctatttataagaaaaaattaactttttagattcattcaataattgatgta 5177851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 224 - 324
Target Start/End: Original strand, 19899646 - 19899748
Alignment:
Q  224 tttttagattcattgaataattaatgtattttat--tgtaaatatagactagatacatcacttatacaatgaaccnnnnnnntcaattgtttcttataat 321  Q
    ||||||| |||||||||||||||| | || || |  | || ||||||||||||||||||| ||| ||||||||||       |||||||||| |||||||    
T  19899646 tttttaggttcattgaataattaacgcatcttgttatatatatatagactagatacatcatttacacaatgaacctatagagtcaattgttttttataat 19899745  T
Q  322 aag 324  Q
    |||    
T  19899746 aag 19899748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 206 - 244
Target Start/End: Complemental strand, 23825280 - 23825242
Alignment:
Q  206 ttacaagaaaaagttgactttttagattcattgaataat 244  Q
    |||||||| |||||||||||||||||| |||||||||||    
T  23825280 ttacaagagaaagttgactttttagatacattgaataat 23825242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 186 - 244
Target Start/End: Complemental strand, 26999172 - 26999114
Alignment:
Q  186 aataccccctccggtccttgttacaagaaaaagttgactttttagattcattgaataat 244  Q
    ||||| ||||||||||||  |||||||| | | |||||||||||||| |||||||||||    
T  26999172 aatactccctccggtcctatttacaagagacatttgactttttagatacattgaataat 26999114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 192 - 294
Target Start/End: Original strand, 36985159 - 36985261
Alignment:
Q  192 ccctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcacttatacaat 291  Q
    ||||||||||||  ||| ||||||| ||| | |||| ||||| |||| ||||||||||||| || ||   ||||||||||| |||||| | |||| ||||    
T  36985159 ccctccggtcctatttataagaaaatgttaatttttaagatttattgtataattaatgtatcttgtttagaatatagactaaatacattatttatgcaat 36985258  T
Q  292 gaa 294  Q
    |||    
T  36985259 gaa 36985261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 192 - 294
Target Start/End: Original strand, 37010598 - 37010700
Alignment:
Q  192 ccctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcacttatacaat 291  Q
    ||||||||||||  ||| ||||||| ||| | |||| ||||| |||| ||||||||||||| || ||   ||||||||||| |||||| | |||| ||||    
T  37010598 ccctccggtcctatttataagaaaatgttaatttttaagatttattgtataattaatgtatcttgtttagaatatagactaaatacattatttatgcaat 37010697  T
Q  292 gaa 294  Q
    |||    
T  37010698 gaa 37010700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 210 - 291
Target Start/End: Original strand, 40460366 - 40460448
Alignment:
Q  210 aagaaaaagttgactttttagattcattgaataatt-aatgtattttattgtaaatatagactagatacatcacttatacaat 291  Q
    |||||||| || |||||||||||||||||  ||||| ||||||| || ||  |||||||||| | |||||||| |||||||||    
T  40460366 aagaaaaaattaactttttagattcattgtgtaattaaatgtatcttgtttaaaatatagaccaaatacatcatttatacaat 40460448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 186 - 244
Target Start/End: Original strand, 42605824 - 42605882
Alignment:
Q  186 aataccccctccggtccttgttacaagaaaaagttgactttttagattcattgaataat 244  Q
    ||||| |||||| |||||  |||||||| |||||||| ||||||||| |||||||||||    
T  42605824 aatactccctccagtcctatttacaagataaagttgattttttagatacattgaataat 42605882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 206 - 244
Target Start/End: Original strand, 44593218 - 44593256
Alignment:
Q  206 ttacaagaaaaagttgactttttagattcattgaataat 244  Q
    |||||||||||||||||||||||| || |||||||||||    
T  44593218 ttacaagaaaaagttgactttttaaatacattgaataat 44593256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 254
Target Start/End: Complemental strand, 6087045 - 6086984
Alignment:
Q  193 cctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtattt 254  Q
    |||||||||||  |||||||| | | || ||||||||||| |||||||||||| ||||||||    
T  6087045 cctccggtcctatttacaagagacaatttactttttagatacattgaataatttatgtattt 6086984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 254
Target Start/End: Complemental strand, 8243826 - 8243765
Alignment:
Q  193 cctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtattt 254  Q
    |||||||||||  |||||||| | | || ||||||||||| |||||||||||| ||||||||    
T  8243826 cctccggtcctatttacaagagacaatttactttttagatacattgaataatttatgtattt 8243765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 254
Target Start/End: Complemental strand, 9440272 - 9440211
Alignment:
Q  193 cctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtattt 254  Q
    |||||||||||  |||||||| | | || ||||||||||| |||||||||||| ||||||||    
T  9440272 cctccggtcctatttacaagagacaatttactttttagatacattgaataatttatgtattt 9440211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 254
Target Start/End: Original strand, 10049672 - 10049733
Alignment:
Q  193 cctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtattt 254  Q
    |||||||||||  |||||||| | | || ||||||||||| |||||||||||| ||||||||    
T  10049672 cctccggtcctatttacaagagacaatttactttttagatacattgaataatttatgtattt 10049733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 187 - 244
Target Start/End: Complemental strand, 10049818 - 10049761
Alignment:
Q  187 ataccccctccggtccttgttacaagaaaaagttgactttttagattcattgaataat 244  Q
    |||| ||||||||||||  |||||||| | | |||||||||||||| |||||||||||    
T  10049818 atactccctccggtcctatttacaagagacaattgactttttagatacattgaataat 10049761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 254
Target Start/End: Complemental strand, 13826256 - 13826195
Alignment:
Q  193 cctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtattt 254  Q
    |||||||| ||  |||||||| |||||||||||||||||| ||||||| |||  ||||||||    
T  13826256 cctccggttctatttacaagagaaagttgactttttagatacattgaagaatgtatgtattt 13826195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 254
Target Start/End: Original strand, 18765262 - 18765323
Alignment:
Q  193 cctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtattt 254  Q
    ||||||||| |  |||||||| |||||||| ||||||||| |||||||||||  ||||||||    
T  18765262 cctccggtcatatttacaagagaaagttgattttttagatacattgaataatgtatgtattt 18765323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 220 - 253
Target Start/End: Original strand, 35239680 - 35239713
Alignment:
Q  220 tgactttttagattcattgaataattaatgtatt 253  Q
    ||||||||||||| ||||||||||||||||||||    
T  35239680 tgactttttagatacattgaataattaatgtatt 35239713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 186 - 250
Target Start/End: Complemental strand, 8266382 - 8266318
Alignment:
Q  186 aataccccctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgt 250  Q
    ||||| ||||||||||||  ||| |||||| | |||||||||| ||||||||| |||| ||||||    
T  8266382 aatactccctccggtcctatttataagaaacatttgacttttttgattcattgtataaataatgt 8266318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 194 - 254
Target Start/End: Complemental strand, 12747840 - 12747780
Alignment:
Q  194 ctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtattt 254  Q
    ||||||||||  ||| |||||||| |||| ||||||||||||| || ||||| ||||||||    
T  12747840 ctccggtcctatttataagaaaaaattgattttttagattcatcgagtaattgatgtattt 12747780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 186 - 254
Target Start/End: Complemental strand, 18765409 - 18765341
Alignment:
Q  186 aataccccctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtattt 254  Q
    ||||| || |||||||||  |||||||||| | || ||||||||||| |||| ||||||| ||||||||    
T  18765409 aatactccttccggtcctatttacaagaaacaatttactttttagatgcattaaataatttatgtattt 18765341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 192 - 244
Target Start/End: Original strand, 21653347 - 21653399
Alignment:
Q  192 ccctccggtccttgttacaagaaaaagttgactttttagattcattgaataat 244  Q
    ||||||||||||  |||||||| ||| |||| ||||||||| |||||||||||    
T  21653347 ccctccggtcctatttacaagagaaatttgattttttagatacattgaataat 21653399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 260 - 296
Target Start/End: Complemental strand, 25313355 - 25313319
Alignment:
Q  260 taaatatagactagatacatcacttatacaatgaacc 296  Q
    ||||||||||||| |||||||||||| ||||||||||    
T  25313355 taaatatagactaaatacatcacttacacaatgaacc 25313319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 192 - 244
Target Start/End: Original strand, 28564938 - 28564990
Alignment:
Q  192 ccctccggtccttgttacaagaaaaagttgactttttagattcattgaataat 244  Q
    ||||||||||||  |||||||| ||| ||||||||||| || |||||||||||    
T  28564938 ccctccggtcctatttacaagagaaaattgactttttatatacattgaataat 28564990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 222 - 254
Target Start/End: Complemental strand, 31836522 - 31836490
Alignment:
Q  222 actttttagattcattgaataattaatgtattt 254  Q
    ||||||||| |||||||||||||||||||||||    
T  31836522 actttttaggttcattgaataattaatgtattt 31836490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 186 - 254
Target Start/End: Complemental strand, 48593293 - 48593225
Alignment:
Q  186 aataccccctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtattt 254  Q
    ||||| ||||||||||||   ||||||||| |  | | |||||||||||||||||||||| ||||||||    
T  48593293 aatactccctccggtcctatatacaagaaacaagtaattttttagattcattgaataatttatgtattt 48593225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 206 - 254
Target Start/End: Original strand, 55139190 - 55139238
Alignment:
Q  206 ttacaagaaaaagttgactttttagattcattgaataattaatgtattt 254  Q
    |||| ||||| | |||||||||||||| |||||||||||| ||||||||    
T  55139190 ttaccagaaacaattgactttttagatacattgaataatttatgtattt 55139238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 94; Significance: 8e-46; HSPs: 84)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 186 - 324
Target Start/End: Complemental strand, 37895406 - 37895268
Alignment:
Q  186 aataccccctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcactta 285  Q
    ||||| ||||||||||||| ||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  37895406 aatactccctccggtccttattataagaaaaagttgactttttagattcatagaataattaatgtattttattgtaaatgtagactagatacatcactta 37895307  T
Q  286 tacaatgaaccnnnnnnntcaattgtttcttataataag 324  Q
    |||||||||||       |||| ||||||||||||||||    
T  37895306 tacaatgaaccaaaaaaatcaactgtttcttataataag 37895268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 187 - 324
Target Start/End: Original strand, 54864062 - 54864199
Alignment:
Q  187 ataccccctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcacttat 286  Q
    |||| ||||||||||||| ||| ||||||||||||||||||||| ||||| ||||||||||||||| |||||||||||||||||||||||||||||||||    
T  54864062 atactccctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgtatcttattgtaaatatagactagatacatcacttat 54864161  T
Q  287 acaatgaaccnnnnnnntcaattgtttcttataataag 324  Q
    ||||||||||       | |||||||||||||||||||    
T  54864162 acaatgaaccaaaaaagttaattgtttcttataataag 54864199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 187 - 324
Target Start/End: Original strand, 35877312 - 35877449
Alignment:
Q  187 ataccccctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcacttat 286  Q
    |||| ||||||||||||| ||| ||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||| ||| ||||||||||||     
T  35877312 atactccctccggtccttattataagaaaaagttgactttttagattcatagaataattaatgtatcttattgtaaatatagtctaaatacatcacttac 35877411  T
Q  287 acaatgaaccnnnnnnntcaattgtttcttataataag 324  Q
    ||||||||||       | |||||||||||||||||||    
T  35877412 acaatgaaccaaaaaaattaattgtttcttataataag 35877449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 193 - 324
Target Start/End: Complemental strand, 43141910 - 43141779
Alignment:
Q  193 cctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcacttatacaatg 292  Q
    ||||||||| || ||| ||||||||||||||||||||| ||||| ||||||||||||||| |||||||||||||||| ||||||||||||||||||||||    
T  43141910 cctccggtctttattataagaaaaagttgactttttaggttcatagaataattaatgtatcttattgtaaatatagattagatacatcacttatacaatg 43141811  T
Q  293 aaccnnnnnnntcaattgtttcttataataag 324  Q
    ||||       | |||||||||||||||||||    
T  43141810 aaccaaaaaagttaattgtttcttataataag 43141779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 186 - 324
Target Start/End: Complemental strand, 36196516 - 36196378
Alignment:
Q  186 aataccccctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcactta 285  Q
    ||||| ||||||||||||| ||| |||||||| |||| ||||||||||||| ||||||||||||||| ||||||||||| ||||||| ||||||||||||    
T  36196516 aatactccctccggtccttattataagaaaaaattgattttttagattcatagaataattaatgtatcttattgtaaatgtagactatatacatcactta 36196417  T
Q  286 tacaatgaaccnnnnnnntcaattgtttcttataataag 324  Q
    || ||||||||       |||||||||||||||||||||    
T  36196416 taaaatgaaccaaaaaaatcaattgtttcttataataag 36196378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 192 - 296
Target Start/End: Complemental strand, 8347637 - 8347533
Alignment:
Q  192 ccctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcacttatacaat 291  Q
    ||||||||||||| ||| ||||||||||||||||||||| ||||| |||||| |||||||| |||||||||||||||||||||||||||| |||||||||    
T  8347637 ccctccggtccttattataagaaaaagttgactttttaggttcatagaataaataatgtatcttattgtaaatatagactagatacatcatttatacaat 8347538  T
Q  292 gaacc 296  Q
    |||||    
T  8347537 gaacc 8347533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 193 - 323
Target Start/End: Complemental strand, 50511389 - 50511259
Alignment:
Q  193 cctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcacttatacaatg 292  Q
    |||||||||||| ||| ||||||||||||||| |||||||| || ||||||||||||||| ||||||||||||||| ||| |||||||||||| ||||||    
T  50511389 cctccggtccttattataagaaaaagttgactctttagatttatagaataattaatgtatcttattgtaaatatagtctaaatacatcacttacacaatg 50511290  T
Q  293 aaccnnnnnnntcaattgtttcttataataa 323  Q
    ||||       | ||||||||||||||||||    
T  50511289 aaccaaaaaagttaattgtttcttataataa 50511259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 224 - 296
Target Start/End: Original strand, 25874735 - 25874807
Alignment:
Q  224 tttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcacttatacaatgaacc 296  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25874735 tttttagattcatagaataattaatgtattttattgtaaatatagactagatacatcacttatacaatgaacc 25874807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 192 - 324
Target Start/End: Original strand, 33615782 - 33615914
Alignment:
Q  192 ccctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcacttatacaat 291  Q
    ||||||||||||| ||| ||||||   |||| |||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||| |||||    
T  33615782 ccctccggtccttattataagaaacttttgattttttagattcattgagtaattaatgtatcttattgtaaatatagactagatacatcacttacacaat 33615881  T
Q  292 gaaccnnnnnnntcaattgtttcttataataag 324  Q
    ||| |       |||||||||| ||||||||||    
T  33615882 gaatctaaaaattcaattgttttttataataag 33615914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 186 - 324
Target Start/End: Complemental strand, 33623031 - 33622893
Alignment:
Q  186 aataccccctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcactta 285  Q
    ||||| ||||||| ||| | ||| |||||||| |||||||||||  ||||| ||||||||||||||| |||||||||||||| |||||||||||||| ||    
T  33623031 aatactccctccgatccctattataagaaaaaattgactttttacgttcatagaataattaatgtatcttattgtaaatataaactagatacatcaccta 33622932  T
Q  286 tacaatgaaccnnnnnnntcaattgtttcttataataag 324  Q
    |||||||||||       | |||||||||||||||||||    
T  33622931 tacaatgaaccaaaaaagttaattgtttcttataataag 33622893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 194 - 324
Target Start/End: Original strand, 54673315 - 54673445
Alignment:
Q  194 ctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcacttatacaatga 293  Q
    ||||||||||| ||| |||||| | |||||||||||| |||||||||||| ||||| || |  || |||||||||||||||||||||||||| | |||||    
T  54673315 ctccggtccttattataagaaacatttgactttttaggttcattgaataagtaatgcatctcgttataaatatagactagatacatcacttacataatga 54673414  T
Q  294 accnnnnnnntcaattgtttcttataataag 324  Q
    |||       |||||||||||||||||||||    
T  54673415 acctaaaaagtcaattgtttcttataataag 54673445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 187 - 324
Target Start/End: Complemental strand, 29686550 - 29686413
Alignment:
Q  187 ataccccctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcacttat 286  Q
    |||| ||||||||||||| ||| |||||| | || | |||||| |||||||| ||||||||||||| || || |||||||||||||||||||||| |||     
T  29686550 atactccctccggtccttattataagaaacaattaattttttaaattcattgtataattaatgtatattgttataaatatagactagatacatcatttac 29686451  T
Q  287 acaatgaaccnnnnnnntcaattgtttcttataataag 324  Q
    ||||||||||       |||| ||||||||||||||||    
T  29686450 acaatgaacctaaaaagtcaaatgtttcttataataag 29686413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 193 - 323
Target Start/End: Original strand, 35929014 - 35929143
Alignment:
Q  193 cctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcacttatacaatg 292  Q
    ||||| ||| || ||| ||||||||||||| ||||||| || || ||||||||||||||| ||||| |||||||||| ||||||||||||||| ||||||    
T  35929014 cctcccgtctttattataagaaaaagttgattttttaggtttatagaataattaatgtatcttattataaatatagattagatacatcacttacacaatg 35929113  T
Q  293 aaccnnnnnnntcaattgtttcttataataa 323  Q
    ||||       ||||||||||||||||||||    
T  35929114 aacc-aaaaaatcaattgtttcttataataa 35929143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 192 - 324
Target Start/End: Complemental strand, 43556837 - 43556704
Alignment:
Q  192 ccctccggtccttgttacaagaaaaag-ttgactttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcacttatacaa 290  Q
    ||||||||||||| ||| ||||||||  |||| ||||||| ||||| ||||||||||||||| ||||||||||| |||||||||||| ||||||| ||||    
T  43556837 ccctccggtccttattataagaaaaaaattgattttttaggttcatagaataattaatgtatcttattgtaaatgtagactagatacgtcacttacacaa 43556738  T
Q  291 tgaaccnnnnnnntcaattgtttcttataataag 324  Q
     ||||        |||||||||||||||||||||    
T  43556737 cgaactaaaaaaatcaattgtttcttataataag 43556704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 188 - 324
Target Start/End: Original strand, 4418096 - 4418232
Alignment:
Q  188 taccccctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcacttata 287  Q
    ||||||||||||||||| ||| |||||| | |||| |||||   ||||| |||||||||||||||||| || |||||||| |||| |||||||||||| |    
T  4418096 taccccctccggtccttattataagaaacaattgatttttttagttcatagaataattaatgtattttgttataaatataaactaaatacatcacttaca 4418195  T
Q  288 caatgaaccnnnnnnntcaattgtttcttataataag 324  Q
    |||||||||       |||||| ||||||||||||||    
T  4418196 caatgaacctaaaaaatcaattttttcttataataag 4418232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 210 - 293
Target Start/End: Complemental strand, 50511554 - 50511471
Alignment:
Q  210 aagaaaaagttgactttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcacttatacaatga 293  Q
    ||||||||||||||| ||||| ||||| ||||||||||||||| |||||||||||||| |||||||||||| |||| |||||||    
T  50511554 aagaaaaagttgactctttaggttcatagaataattaatgtatcttattgtaaatataaactagatacatcccttacacaatga 50511471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 196 - 295
Target Start/End: Complemental strand, 52966536 - 52966437
Alignment:
Q  196 ccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcacttatacaatgaac 295  Q
    ||||||||| ||| |||||| | |||||||||| | ||||| |||||||||||| || || || ||||||||||||||||||||||||||||||||||||    
T  52966536 ccggtccttattataagaaacaattgacttttttggttcatagaataattaatgcatcttgttataaatatagactagatacatcacttatacaatgaac 52966437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 193 - 324
Target Start/End: Complemental strand, 32193619 - 32193488
Alignment:
Q  193 cctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcacttatacaatg 292  Q
    |||||||||||| ||| ||||||| ||||| ||||||  ||||| ||||||||||||||  |||||  ||||||||||||||||||| ||||| | ||||    
T  32193619 cctccggtccttattataagaaaacgttgattttttaagttcatagaataattaatgtaccttattagaaatatagactagatacattacttacataatg 32193520  T
Q  293 aaccnnnnnnntcaattgtttcttataataag 324  Q
    ||||       |||||||||||||||||||||    
T  32193519 aaccaaaaaagtcaattgtttcttataataag 32193488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 192 - 281
Target Start/End: Original strand, 24100762 - 24100851
Alignment:
Q  192 ccctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtattttattgtaaatatagactagatacatca 281  Q
    ||||||| ||||| ||| |||||| | || ||||||||||||||||||||||||||||||| || || ||||||||||||||||||||||    
T  24100762 ccctccgatccttattataagaaataattaactttttagattcattgaataattaatgtatcttgttataaatatagactagatacatca 24100851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 187 - 324
Target Start/End: Complemental strand, 25756862 - 25756725
Alignment:
Q  187 ataccccctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcacttat 286  Q
    |||| ||||||||||||| ||| |||||| | |||||||||||  ||||||| ||||||||||||| |  || |||||| |||||||||||||||||||     
T  25756862 atactccctccggtccttattataagaaacaattgactttttatgttcattggataattaatgtatctcgttataaatagagactagatacatcacttac 25756763  T
Q  287 acaatgaaccnnnnnnntcaattgtttcttataataag 324  Q
    ||| ||||||       |||||| ||||||||||||||    
T  25756762 acagtgaacctaaaaagtcaattatttcttataataag 25756725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 219 - 294
Target Start/End: Original strand, 1140895 - 1140970
Alignment:
Q  219 ttgactttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcacttatacaatgaa 294  Q
    |||| |||||||||||||||||||||| ||||||||| || ||||||||||| |||||||||||||| ||||||||    
T  1140895 ttgaatttttagattcattgaataattgatgtattttgttataaatatagaccagatacatcacttacacaatgaa 1140970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 210 - 294
Target Start/End: Complemental strand, 52278094 - 52278008
Alignment:
Q  210 aagaaaaagttgactttttagattcattgaataattaatgtattttattgtaaatatagactagatac--atcacttatacaatgaa 294  Q
    |||||||| ||||||||||||||| || ||||||||||| ||| ||||||||||||||||||| ||||  |||||||||| ||||||    
T  52278094 aagaaaaaattgactttttagatttatagaataattaatatatcttattgtaaatatagactaaatacatatcacttatataatgaa 52278008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 187 - 254
Target Start/End: Complemental strand, 53225794 - 53225727
Alignment:
Q  187 ataccccctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtattt 254  Q
    |||| ||||||||||||  ||| |||||||| ||||||||||||||||||||||||||||||||||||    
T  53225794 atactccctccggtcctatttataagaaaaaattgactttttagattcattgaataattaatgtattt 53225727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 210 - 296
Target Start/End: Original strand, 31853088 - 31853174
Alignment:
Q  210 aagaaaaagttgactttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcacttatacaatgaacc 296  Q
    |||||| | |||| |||||  |||||| ||||||||||||||| || || |||||||||||||||||||||||||| ||||||||||    
T  31853088 aagaaataattgatttttttaattcatagaataattaatgtatcttgttataaatatagactagatacatcacttacacaatgaacc 31853174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 237 - 294
Target Start/End: Original strand, 1205130 - 1205187
Alignment:
Q  237 tgaataattaatgtattttattgtaaatatagactagatacatcacttatacaatgaa 294  Q
    |||||||||||||||| ||||| |||||||||||||||||||||||||| ||||||||    
T  1205130 tgaataattaatgtatcttattataaatatagactagatacatcacttagacaatgaa 1205187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 194 - 323
Target Start/End: Complemental strand, 19350753 - 19350626
Alignment:
Q  194 ctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcacttatacaatga 293  Q
    ||||||||||| ||| || |||||||||||||||||| || || ||||| ||||||| | ||||| |||||| ||||||||||| ||||||| |||||||    
T  19350753 ctccggtccttattaaaaaaaaaagttgactttttaggtttatagaatacttaatgt-tcttattataaataaagactagatac-tcacttacacaatga 19350656  T
Q  294 accnnnnnnntcaattgtttcttataataa 323  Q
    |||       | ||||||||||||||||||    
T  19350655 accaaaaaaattaattgtttcttataataa 19350626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 222 - 294
Target Start/End: Complemental strand, 40592827 - 40592755
Alignment:
Q  222 actttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcacttatacaatgaa 294  Q
    ||||||||| || || ||||||||||||||| || || |||||||| ||||||||||||||||||||||||||    
T  40592827 actttttaggtttatagaataattaatgtatcttgttataaatataaactagatacatcacttatacaatgaa 40592755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 186 - 294
Target Start/End: Original strand, 48361049 - 48361157
Alignment:
Q  186 aataccccctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcactta 285  Q
    ||||| ||||||||||||  ||| |||||||| ||||||||||||||||||||| ||||| ||||||||| |    ||||||||| | |||||||| |||    
T  48361049 aatactccctccggtcctatttataagaaaaatttgactttttagattcattgagtaattgatgtattttgtctagaatatagaccaaatacatcattta 48361148  T
Q  286 tacaatgaa 294  Q
    | |||||||    
T  48361149 tgcaatgaa 48361157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 220 - 296
Target Start/End: Complemental strand, 56491189 - 56491113
Alignment:
Q  220 tgactttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcacttatacaatgaacc 296  Q
    ||||||||||  ||||||||||||||||||||  |  || |||||||||||||||||||| ||||||||||||||||    
T  56491189 tgactttttaagttcattgaataattaatgtacctcgttataaatatagactagatacattacttatacaatgaacc 56491113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 193 - 324
Target Start/End: Complemental strand, 27587390 - 27587259
Alignment:
Q  193 cctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcacttatacaatg 292  Q
    |||||| ||||| ||| |||||| | || | ||||||| ||||||||||||||||||||| |  || |||||||| ||||||||||||| ||||| |||     
T  27587390 cctccgatccttattataagaaataatttattttttaggttcattgaataattaatgtatctcgttataaatatacactagatacatcatttatataata 27587291  T
Q  293 aaccnnnnnnntcaattgtttcttataataag 324  Q
    || |       |||||||||||||||||||||    
T  27587290 aatctaaaaagtcaattgtttcttataataag 27587259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 199 - 296
Target Start/End: Complemental strand, 52136837 - 52136740
Alignment:
Q  199 gtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcacttatacaatgaacc 296  Q
    |||||| ||| |||||| | |||| |||||   ||||| ||||||||||||||| || || ||||||||||||| |||||||||||| ||||||||||    
T  52136837 gtccttattataagaaacaattgatttttttagttcatagaataattaatgtatcttgttataaatatagactaaatacatcacttacacaatgaacc 52136740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 219 - 324
Target Start/End: Original strand, 28460776 - 28460881
Alignment:
Q  219 ttgactttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcacttatacaatgaaccnnnnnnntcaattgtttcttat 318  Q
    |||| ||||||||||||||   |||||||| ||| || |||||||||||||||| |||||||||||||| |||||| |        ||||||||||||||    
T  28460776 ttgattttttagattcattatgtaattaatttatcttgttgtaaatatagactaaatacatcacttatataatgaatctaaaaagccaattgtttcttat 28460875  T
Q  319 aataag 324  Q
    ||||||    
T  28460876 aataag 28460881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 194 - 285
Target Start/End: Original strand, 42159978 - 42160069
Alignment:
Q  194 ctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcactta 285  Q
    ||||||||||| ||| |||||| | |||| |||||   ||||| ||||||||||||||| || || ||||||||||||| ||||||||||||    
T  42159978 ctccggtccttattataagaaataattgattttttttgttcatagaataattaatgtatcttgttataaatatagactaaatacatcactta 42160069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 188 - 251
Target Start/End: Original strand, 43020755 - 43020818
Alignment:
Q  188 taccccctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgta 251  Q
    ||||||||||||||||  ||| ||||||||||| |||||||||||||||| ||||||| |||||    
T  43020755 taccccctccggtcctatttataagaaaaagttaactttttagattcattcaataattgatgta 43020818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 210 - 272
Target Start/End: Original strand, 22210810 - 22210872
Alignment:
Q  210 aagaaaaagttgactttttagattcattgaataattaatgtattttattgtaaatatagacta 272  Q
    |||||| | ||||||||||| |||||||||||||||||| ||| || ||||||||||||||||    
T  22210810 aagaaacaattgactttttaaattcattgaataattaatatatcttgttgtaaatatagacta 22210872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 192 - 286
Target Start/End: Complemental strand, 44111890 - 44111796
Alignment:
Q  192 ccctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcacttat 286  Q
    |||||||||| |  ||| |||||||||||||||||||||||||||||| ||||| |||||| || ||   ||||||||| | |||||||| ||||    
T  44111890 ccctccggtcttatttataagaaaaagttgactttttagattcattgagtaattgatgtatcttctttagaatatagaccaaatacatcatttat 44111796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 187 - 244
Target Start/End: Original strand, 2385193 - 2385250
Alignment:
Q  187 ataccccctccggtccttgttacaagaaaaagttgactttttagattcattgaataat 244  Q
    |||| ||||||||||||  |||||||| |||||||||||||||||| |||||||||||    
T  2385193 atactccctccggtcctatttacaagagaaagttgactttttagatacattgaataat 2385250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 219 - 296
Target Start/End: Complemental strand, 9813574 - 9813497
Alignment:
Q  219 ttgactttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcacttatacaatgaacc 296  Q
    |||||||||||| || |||| || ||||||| || |  || |||||||||||||||||||||||||| ||||||||||    
T  9813574 ttgactttttaggtttattgcatgattaatgcatctcgttataaatatagactagatacatcacttacacaatgaacc 9813497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 186 - 255
Target Start/End: Complemental strand, 42169194 - 42169125
Alignment:
Q  186 aataccccctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtatttt 255  Q
    ||||| ||||| ||||||  ||| |||||||| ||||||||||||||| ||||||||||| |||||||||    
T  42169194 aatacgccctctggtcctatttataagaaaaatttgactttttagatttattgaataattgatgtatttt 42169125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 210 - 294
Target Start/End: Original strand, 8347666 - 8347750
Alignment:
Q  210 aagaaaaagttgactttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcacttatacaatgaa 294  Q
    |||||||| ||||||||||||||||||||| | ||| ||||||||| |   ||||||||||   |||||||| ||||||||||||    
T  8347666 aagaaaaatttgactttttagattcattgagtgattgatgtattttgtataaaatatagaccgaatacatcatttatacaatgaa 8347750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 187 - 254
Target Start/End: Complemental strand, 6246758 - 6246691
Alignment:
Q  187 ataccccctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtattt 254  Q
    |||| ||||||||||||  |||||||| |||||||||||||||||| |||| ||||||  ||||||||    
T  6246758 atactccctccggtcctatttacaagagaaagttgactttttagatacattcaataatatatgtattt 6246691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 192 - 251
Target Start/End: Original strand, 19150661 - 19150720
Alignment:
Q  192 ccctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgta 251  Q
    |||| |||||||  ||| |||||||||||||||||||||||| ||||| |||||||||||    
T  19150661 ccctacggtcctatttataagaaaaagttgactttttagatttattgagtaattaatgta 19150720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 210 - 253
Target Start/End: Complemental strand, 21554235 - 21554192
Alignment:
Q  210 aagaaaaagttgactttttagattcattgaataattaatgtatt 253  Q
    ||||||||||||| |||||||||||||||| |||||||||||||    
T  21554235 aagaaaaagttgattttttagattcattgagtaattaatgtatt 21554192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 186 - 244
Target Start/End: Original strand, 4758774 - 4758832
Alignment:
Q  186 aataccccctccggtccttgttacaagaaaaagttgactttttagattcattgaataat 244  Q
    ||||| ||||||||||||  |||||||| | |||||||||||||||| |||||||||||    
T  4758774 aatactccctccggtcctatttacaagagacagttgactttttagatacattgaataat 4758832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 193 - 251
Target Start/End: Complemental strand, 20459384 - 20459326
Alignment:
Q  193 cctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgta 251  Q
    |||||||||||  ||| ||||||||||| |||||||||||||||| ||||||| |||||    
T  20459384 cctccggtcctatttataagaaaaagttaactttttagattcattcaataattgatgta 20459326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 192 - 254
Target Start/End: Complemental strand, 28020622 - 28020560
Alignment:
Q  192 ccctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtattt 254  Q
    |||||||||| || ||| |||||||||||||||||||| ||| ||| | ||||||||||||||    
T  28020622 ccctccggtcatttttataagaaaaagttgactttttaaatttattaagtaattaatgtattt 28020560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 193 - 279
Target Start/End: Original strand, 41116566 - 41116652
Alignment:
Q  193 cctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtattttattgtaaatatagactagatacat 279  Q
    |||||||||||  ||| |||||||| || |||||||||||||||||| ||||| |||||| ||||   |||||||||| | ||||||    
T  41116566 cctccggtcctatttataagaaaaatttaactttttagattcattgagtaattgatgtatcttatctaaaatatagaccaaatacat 41116652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 193 - 251
Target Start/End: Original strand, 42804260 - 42804318
Alignment:
Q  193 cctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgta 251  Q
    |||||||||||  ||| ||||||||||| |||||||||||||||| ||||||| |||||    
T  42804260 cctccggtcctatttataagaaaaagttaactttttagattcattcaataattgatgta 42804318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 192 - 254
Target Start/End: Complemental strand, 45828560 - 45828498
Alignment:
Q  192 ccctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtattt 254  Q
    |||| |||||||  ||| |||||||| |||| |||||||||||||||| ||||||||||||||    
T  45828560 cccttcggtcctatttataagaaaaaattgattttttagattcattgagtaattaatgtattt 45828498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 193 - 251
Target Start/End: Original strand, 47866040 - 47866098
Alignment:
Q  193 cctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgta 251  Q
    |||||||||||  ||| ||||||||||| |||||||||||||||| ||||||| |||||    
T  47866040 cctccggtcctatttataagaaaaagttaactttttagattcattcaataattgatgta 47866098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 212 - 294
Target Start/End: Original strand, 47943750 - 47943832
Alignment:
Q  212 gaaaaagttgactttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcacttatacaatgaa 294  Q
    |||||| ||||||||||||||| ||||| ||||||||||| ||  |   |||||||||||| |||||||| |||| |||||||    
T  47943750 gaaaaaattgactttttagattaattgagtaattaatgtacttggtataaaatatagactaaatacatcatttatgcaatgaa 47943832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 193 - 254
Target Start/End: Original strand, 16412238 - 16412299
Alignment:
Q  193 cctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtattt 254  Q
    |||||||| ||  ||| |||||||| ||||||||||||||||||||||||||| || |||||    
T  16412238 cctccggttctatttataagaaaaaattgactttttagattcattgaataattgatatattt 16412299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 195 - 244
Target Start/End: Original strand, 31854385 - 31854434
Alignment:
Q  195 tccggtccttgttacaagaaaaagttgactttttagattcattgaataat 244  Q
    |||||||||  |||||||| |||||||||||||||||| |||||||||||    
T  31854385 tccggtcctaattacaagagaaagttgactttttagatacattgaataat 31854434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 254 - 295
Target Start/End: Original strand, 38208314 - 38208355
Alignment:
Q  254 ttattgtaaatatagactagatacatcacttatacaatgaac 295  Q
    |||||| ||||||||||||||||||||||||| |||||||||    
T  38208314 ttattgaaaatatagactagatacatcacttaaacaatgaac 38208355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 187 - 244
Target Start/End: Original strand, 53621326 - 53621383
Alignment:
Q  187 ataccccctccggtccttgttacaagaaaaagttgactttttagattcattgaataat 244  Q
    |||| ||||||||||||  |||||||| | |||||||||||||||| |||||||||||    
T  53621326 atactccctccggtcctatttacaagagacagttgactttttagatacattgaataat 53621383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 210 - 286
Target Start/End: Original strand, 4386157 - 4386233
Alignment:
Q  210 aagaaaaagttgactttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcacttat 286  Q
    |||||||| ||||||||||| ||||||| | ||||| |||||||||||    ||||||||||| |||||||| ||||    
T  4386157 aagaaaaatttgactttttaaattcattaagtaattgatgtattttatctacaatatagactaaatacatcatttat 4386233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 200 - 252
Target Start/End: Complemental strand, 24100941 - 24100889
Alignment:
Q  200 tccttgttacaagaaaaagttgactttttagattcattgaataattaatgtat 252  Q
    ||||| ||| |||||| | || |||||||||||||||||||||||||||||||    
T  24100941 tccttattataagaaataattaactttttagattcattgaataattaatgtat 24100889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 210 - 294
Target Start/End: Original strand, 30191917 - 30192001
Alignment:
Q  210 aagaaaaagttgactttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcacttatacaatgaa 294  Q
    |||||||| |||| |||||||||||||||| ||||| ||||||||| |    ||||||||| | |||||||| |||| |||||||    
T  30191917 aagaaaaaattgattttttagattcattgagtaattgatgtattttgtctagaatatagaccaaatacatcatttatgcaatgaa 30192001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 210 - 294
Target Start/End: Complemental strand, 36132762 - 36132678
Alignment:
Q  210 aagaaaaagttgactttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcacttatacaatgaa 294  Q
    |||||||| ||||||||| |||| |||||| || || |||||| || |  | ||||||||||| |||||||| ||||||||||||    
T  36132762 aagaaaaaattgacttttaagatacattgagtagttgatgtatcttgtcttgaatatagactaaatacatcatttatacaatgaa 36132678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 192 - 244
Target Start/End: Original strand, 38687914 - 38687966
Alignment:
Q  192 ccctccggtccttgttacaagaaaaagttgactttttagattcattgaataat 244  Q
    |||||||||| |  |||||||| |||||||||||||||||| |||||||||||    
T  38687914 ccctccggtcttatttacaagagaaagttgactttttagatacattgaataat 38687966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 186 - 254
Target Start/End: Complemental strand, 38688062 - 38687994
Alignment:
Q  186 aataccccctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtattt 254  Q
    ||||| ||||||||||||  |||||||||| | || ||||||||||| |||| ||||||| ||||||||    
T  38688062 aatactccctccggtcctatttacaagaaacaatttactttttagatacattaaataatttatgtattt 38687994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 222 - 254
Target Start/End: Complemental strand, 39993153 - 39993121
Alignment:
Q  222 actttttagattcattgaataattaatgtattt 254  Q
    |||||||||||||||||||||||||||||||||    
T  39993153 actttttagattcattgaataattaatgtattt 39993121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 185 - 252
Target Start/End: Original strand, 4698619 - 4698686
Alignment:
Q  185 caataccccctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtat 252  Q
    |||||| ||||| | ||||| |||||||||| | |||| ||||||||| |||||||||||| ||||||    
T  4698619 caatactccctctgatcctttttacaagaaacaattgaatttttagatacattgaataatttatgtat 4698686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 194 - 237
Target Start/End: Original strand, 9894630 - 9894673
Alignment:
Q  194 ctccggtccttgttacaagaaaaagttgactttttagattcatt 237  Q
    ||||||||||  ||| ||||||||||||||||||||||||||||    
T  9894630 ctccggtcctatttataagaaaaagttgactttttagattcatt 9894673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 193 - 244
Target Start/End: Complemental strand, 20688560 - 20688509
Alignment:
Q  193 cctccggtccttgttacaagaaaaagttgactttttagattcattgaataat 244  Q
    |||||||||||  |||||||| | |||||||||||||||| |||||||||||    
T  20688560 cctccggtcctatttacaagagacagttgactttttagatacattgaataat 20688509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 193 - 244
Target Start/End: Original strand, 55292116 - 55292167
Alignment:
Q  193 cctccggtccttgttacaagaaaaagttgactttttagattcattgaataat 244  Q
    |||||||||||  |||||||| ||| |||||||||||||| |||||||||||    
T  55292116 cctccggtcctatttacaagagaaatttgactttttagatacattgaataat 55292167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 192 - 294
Target Start/End: Complemental strand, 696495 - 696393
Alignment:
Q  192 ccctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcacttatacaat 291  Q
    ||||||||||||  ||| ||||||||||| | |||| ||||| |||  ||||||||||||| || ||   ||||||||||| || ||||| |||| ||||    
T  696495 ccctccggtcctatttataagaaaaagttaatttttaagatttattatataattaatgtatcttgtttagaatatagactaaatccatcatttatgcaat 696396  T
Q  292 gaa 294  Q
    |||    
T  696395 gaa 696393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 192 - 294
Target Start/End: Complemental strand, 764793 - 764691
Alignment:
Q  192 ccctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcacttatacaat 291  Q
    ||||||||||||  ||| ||||||||||| | |||| ||||| |||  ||||||||||||| || ||   ||||||||||| || ||||| |||| ||||    
T  764793 ccctccggtcctatttataagaaaaagttaatttttaagatttattatataattaatgtatcttgtttagaatatagactaaatccatcatttatgcaat 764694  T
Q  292 gaa 294  Q
    |||    
T  764693 gaa 764691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 291
Target Start/End: Complemental strand, 23559050 - 23558952
Alignment:
Q  193 cctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcacttatacaat 291  Q
    ||||||||| || ||| ||| || | |||| |||||||  |||||| ||||||||| ||| |  || |||||||||||||||||||||| ||| |||||    
T  23559050 cctccggtctttattataagtaacaattgattttttaggctcattggataattaatatatctcgttataaatatagactagatacatcagttacacaat 23558952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 194 - 244
Target Start/End: Original strand, 32517775 - 32517825
Alignment:
Q  194 ctccggtccttgttacaagaaaaagttgactttttagattcattgaataat 244  Q
    ||||||||||  ||| |||| |||||||||||||||||| |||||||||||    
T  32517775 ctccggtcctatttataagagaaagttgactttttagatacattgaataat 32517825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 186 - 244
Target Start/End: Complemental strand, 36099638 - 36099580
Alignment:
Q  186 aataccccctccggtccttgttacaagaaaaagttgactttttagattcattgaataat 244  Q
    ||||| ||||||||||||  |||||||| | |||||| ||||||||| |||||||||||    
T  36099638 aatactccctccggtcctatttacaagagacagttgattttttagatacattgaataat 36099580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 266 - 324
Target Start/End: Complemental strand, 1100967 - 1100909
Alignment:
Q  266 tagactagatacatcacttatacaatgaaccnnnnnnntcaattgtttcttataataag 324  Q
    |||||||||||||||||||| ||||||||||       |||| ||||||||||||||||    
T  1100967 tagactagatacatcacttaaacaatgaacctaaaaagtcaaatgtttcttataataag 1100909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 254
Target Start/End: Complemental strand, 18135457 - 18135396
Alignment:
Q  193 cctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtattt 254  Q
    |||||||||||  |||||||| | | || ||||||||||| |||||||||||| ||||||||    
T  18135457 cctccggtcctatttacaagagacaatttactttttagatacattgaataatttatgtattt 18135396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 187 - 244
Target Start/End: Complemental strand, 19485722 - 19485665
Alignment:
Q  187 ataccccctccggtccttgttacaagaaaaagttgactttttagattcattgaataat 244  Q
    |||| ||||||||||||  |||||||| ||| |||| ||||||||| |||||||||||    
T  19485722 atactccctccggtcctatttacaagagaaaattgattttttagatacattgaataat 19485665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 294
Target Start/End: Complemental strand, 22020054 - 22019977
Alignment:
Q  217 agttgactttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcacttatacaatgaa 294  Q
    ||||||||||||||||| |||  |||||||||| || |  || |||||||||| |||| |||||||||| | ||||||    
T  22020054 agttgactttttagattaattagataattaatgcatctcgttataaatatagattagacacatcacttacagaatgaa 22019977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 187 - 244
Target Start/End: Complemental strand, 31227421 - 31227364
Alignment:
Q  187 ataccccctccggtccttgttacaagaaaaagttgactttttagattcattgaataat 244  Q
    |||| |||| |||||||  |||||||| |||||||||||||||||| |||| ||||||    
T  31227421 atactcccttcggtcctatttacaagagaaagttgactttttagatacattaaataat 31227364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 206 - 255
Target Start/End: Original strand, 36866870 - 36866919
Alignment:
Q  206 ttacaagaaaaagttgactttttagattcattgaataattaatgtatttt 255  Q
    |||||||||| | |||||||| |||||| ||||||||||| |||||||||    
T  36866870 ttacaagaaacaattgactttatagatttattgaataattgatgtatttt 36866919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 210 - 291
Target Start/End: Complemental strand, 43117981 - 43117900
Alignment:
Q  210 aagaaaaagttgactttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcacttatacaat 291  Q
    |||||||| |||| |||||| ||||||||||||||| ||||||||  |   |||||||||| | |||||||| |||| ||||    
T  43117981 aagaaaaaattgattttttacattcattgaataattgatgtatttggtataaaatatagaccaaatacatcatttatgcaat 43117900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 254
Target Start/End: Complemental strand, 53621472 - 53621411
Alignment:
Q  193 cctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtattt 254  Q
    |||||||||||  |||||||| | | || ||||||||||| |||||||||||| ||||||||    
T  53621472 cctccggtcctatttacaagagacaatttactttttagatacattgaataatttatgtattt 53621411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 187 - 251
Target Start/End: Original strand, 2643606 - 2643670
Alignment:
Q  187 ataccccctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgta 251  Q
    ||||||| | |||||||  ||| |||||| | |||||||||||| |||||||||||||| |||||    
T  2643606 ataccccattcggtcctatttataagaaataattgactttttagtttcattgaataatttatgta 2643670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 195 - 251
Target Start/End: Complemental strand, 20745473 - 20745417
Alignment:
Q  195 tccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgta 251  Q
    |||||||||  ||| ||||||||||| | |||||||||||||| ||||||| |||||    
T  20745473 tccggtcctatttataagaaaaagttaattttttagattcattcaataattgatgta 20745417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 186 - 238
Target Start/End: Original strand, 29686397 - 29686449
Alignment:
Q  186 aataccccctccggtccttgttacaagaaaaagttgactttttagattcattg 238  Q
    ||||| ||||||||||||| ||| |||||| | |||||||||||| |||||||    
T  29686397 aatactccctccggtccttattataagaaacatttgactttttaggttcattg 29686449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 194 - 254
Target Start/End: Original strand, 29833270 - 29833330
Alignment:
Q  194 ctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtattt 254  Q
    ||||||||||  |||||||| ||| |||||||||||||| ||||||| |||  ||||||||    
T  29833270 ctccggtcctatttacaagataaaattgactttttagatacattgaagaatatatgtattt 29833330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 210 - 254
Target Start/End: Complemental strand, 56216361 - 56216317
Alignment:
Q  210 aagaaaaagttgactttttagattcattgaataattaatgtattt 254  Q
    |||| |||||||||||||||||| |||||||||||  ||||||||    
T  56216361 aagagaaagttgactttttagatacattgaataatgtatgtattt 56216317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 90; Significance: 2e-43; HSPs: 73)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 186 - 324
Target Start/End: Original strand, 34604778 - 34604916
Alignment:
Q  186 aataccccctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcactta 285  Q
    ||||| ||||||||||||| ||| ||||||||||||||||||||| ||||| |||||| |||||||| ||||||||||||||||||||||||||||||||    
T  34604778 aatactccctccggtccttattataagaaaaagttgactttttaggttcatagaataaataatgtatcttattgtaaatatagactagatacatcactta 34604877  T
Q  286 tacaatgaaccnnnnnnntcaattgtttcttataataag 324  Q
    |||||||||||       |||||||||||||||||||||    
T  34604878 tacaatgaaccaaaaaaatcaattgtttcttataataag 34604916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 187 - 324
Target Start/End: Complemental strand, 13832025 - 13831888
Alignment:
Q  187 ataccccctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcacttat 286  Q
    |||| ||||||||||||| ||| ||||||||||||||||||||| ||||| ||||||||||||||| ||||||||||||||||||| |||||||||||||    
T  13832025 atactccctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgtatcttattgtaaatatagactatatacatcacttat 13831926  T
Q  287 acaatgaaccnnnnnnntcaattgtttcttataataag 324  Q
    ||||||||||       | |||||||||||||||||||    
T  13831925 acaatgaaccaaaaaagttaattgtttcttataataag 13831888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 186 - 324
Target Start/End: Complemental strand, 43932200 - 43932062
Alignment:
Q  186 aataccccctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcactta 285  Q
    ||||| ||||||||||||| ||| |||||| | |||||||||||||||||||||||||||||||||| || || |||||||||| ||||||||||| ||     
T  43932200 aatactccctccggtccttattataagaaacaattgactttttagattcattgaataattaatgtatcttgttataaatatagattagatacatcatttg 43932101  T
Q  286 tacaatgaaccnnnnnnntcaattgtttcttataataag 324  Q
    |||||||||||       |||||||||||||||||||||    
T  43932100 tacaatgaacctaaaaagtcaattgtttcttataataag 43932062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 199 - 324
Target Start/End: Original strand, 29690446 - 29690571
Alignment:
Q  199 gtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcacttatacaatgaaccnn 298  Q
    |||||| ||| ||||||||  ||||||||||| ||||| ||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||      
T  29690446 gtccttattataagaaaaaactgactttttaggttcatagaataattaatgtatcttattataaatatagactagatacatcacttatacaatgaaccaa 29690545  T
Q  299 nnnnntcaattgtttcttataataag 324  Q
         | |||||||||||||||||||    
T  29690546 aaaagttaattgtttcttataataag 29690571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 187 - 324
Target Start/End: Original strand, 35583881 - 35584018
Alignment:
Q  187 ataccccctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcacttat 286  Q
    |||| |||||| |||||| ||| ||||||||  |||| |||||| ||||| ||||||||||||||| |||||||||||||||| ||||||||||||||||    
T  35583881 atactccctccagtccttattataagaaaaatatgaccttttaggttcatagaataattaatgtatcttattgtaaatatagattagatacatcacttat 35583980  T
Q  287 acaatgaaccnnnnnnntcaattgtttcttataataag 324  Q
    ||||||||||       | |||||||||||||||||||    
T  35583981 acaatgaaccaaaaaagttaattgtttcttataataag 35584018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 192 - 324
Target Start/End: Original strand, 45372708 - 45372840
Alignment:
Q  192 ccctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcacttatacaat 291  Q
    |||||||||||||  || ||||||||||||||||||||| ||||| ||||||||||||||| |||||| ||||||||||||||||||||||||| ||| |    
T  45372708 ccctccggtccttaatataagaaaaagttgactttttaggttcatagaataattaatgtatcttattgaaaatatagactagatacatcacttacacatt 45372807  T
Q  292 gaaccnnnnnnntcaattgtttcttataataag 324  Q
    ||| |       ||||||||| |||||||||||    
T  45372808 gaatcaaaaaagtcaattgttacttataataag 45372840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 187 - 324
Target Start/End: Complemental strand, 7548648 - 7548510
Alignment:
Q  187 ataccccctccggtccttgttacaagaaaaagttgacttttt-agattcattgaataattaatgtattttattgtaaatatagactagatacatcactta 285  Q
    |||| ||||||||||||| ||| ||||||||||||| ||||| || ||||| |||||||||||| || ||||||||||||||| ||| ||||||||||||    
T  7548648 atactccctccggtccttattataagaaaaagttgatttttttaggttcatagaataattaatgcatcttattgtaaatatagtctaaatacatcactta 7548549  T
Q  286 tacaatgaaccnnnnnnntcaattgtttcttataataag 324  Q
     ||||||||||       | |||||||||||||||||||    
T  7548548 cacaatgaaccaaaaaaattaattgtttcttataataag 7548510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 186 - 291
Target Start/End: Complemental strand, 44580044 - 44579939
Alignment:
Q  186 aataccccctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcactta 285  Q
    ||||| |||| | |||||| ||| ||||||||||||||||||||  ||||| ||||||||||||||| ||||||||||||||||||||||| || |||||    
T  44580044 aatactcccttcagtccttattataagaaaaagttgactttttaagttcatagaataattaatgtatcttattgtaaatatagactagatatattactta 44579945  T
Q  286 tacaat 291  Q
    ||||||    
T  44579944 tacaat 44579939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 187 - 324
Target Start/End: Original strand, 43292566 - 43292703
Alignment:
Q  187 ataccccctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcacttat 286  Q
    |||| ||||||||||||| ||| |||||| | |||||||||| | ||||| ||||||||||||||| || || ||||||||||||||||||||||||||     
T  43292566 atactccctccggtccttattataagaaacaattgacttttttggttcatagaataattaatgtatcttgttataaatatagactagatacatcacttac 43292665  T
Q  287 acaatgaaccnnnnnnntcaattgtttcttataataag 324  Q
    | ||||||||       |||| ||||||||||||||||    
T  43292666 ataatgaacctaaaaagtcaaatgtttcttataataag 43292703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 186 - 294
Target Start/End: Original strand, 34745254 - 34745362
Alignment:
Q  186 aataccccctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcactta 285  Q
    ||||| ||||||||||||| ||| |||||| | |||||||||| | ||||| ||||||||||||||| || || ||||||||||||||||||||||||||    
T  34745254 aatactccctccggtccttattataagaaacaattgacttttttggttcatagaataattaatgtatcttgttataaatatagactagatacatcactta 34745353  T
Q  286 tacaatgaa 294  Q
     | ||||||    
T  34745354 cataatgaa 34745362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 194 - 324
Target Start/End: Original strand, 24599674 - 24599804
Alignment:
Q  194 ctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcacttatacaatga 293  Q
    |||||||| || ||| |||||| | ||||||||||| ||||||||||||| |||||||||| ||| |||||||||  ||||||||||| |||||||||||    
T  24599674 ctccggtctttattataagaaataattgactttttaaattcattgaataaataatgtatttcattataaatataggttagatacatcagttatacaatga 24599773  T
Q  294 accnnnnnnntcaattgtttcttataataag 324  Q
    | |       ||||||||||||||| |||||    
T  24599774 atctaaaaaatcaattgtttcttattataag 24599804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 186 - 294
Target Start/End: Complemental strand, 7693184 - 7693076
Alignment:
Q  186 aataccccctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcactta 285  Q
    ||||| || |||||||||  ||| |||||||| ||||||||||||||||||||| ||||||||||||||  |   |||||||||||| |||||||| |||    
T  7693184 aatactccttccggtcctatttataagaaaaaattgactttttagattcattgagtaattaatgtatttggtataaaatatagactaaatacatcattta 7693085  T
Q  286 tacaatgaa 294  Q
    | |||||||    
T  7693084 tgcaatgaa 7693076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 203 - 295
Target Start/End: Complemental strand, 38298635 - 38298543
Alignment:
Q  203 ttgttacaagaaaaagttgactttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcacttatacaatgaac 295  Q
    |||||| |||||| | |||| ||||||| ||||||||||||||||||||| |  || ||||||||| |||||||||||||||| |||||||||    
T  38298635 ttgttataagaaacaattgattttttaggttcattgaataattaatgtatctcgttataaatataggctagatacatcacttacacaatgaac 38298543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 197 - 279
Target Start/End: Original strand, 9633089 - 9633171
Alignment:
Q  197 cggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtattttattgtaaatatagactagatacat 279  Q
    |||||||| ||| |||||| | ||||| |||||||||||||| ||||||||||||| || || ||||||||||||||||||||    
T  9633089 cggtccttattataagaaacaattgacgttttagattcattgtataattaatgtatcttgttataaatatagactagatacat 9633171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 186 - 296
Target Start/End: Complemental strand, 43409985 - 43409875
Alignment:
Q  186 aataccccctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcactta 285  Q
    ||||| ||||||||||||| |||  || || |  ||||||||| | ||||||||||||||||||||  |  || |||||||||||||||||||| |||||    
T  43409985 aatactccctccggtccttattattagcaacaaatgactttttcggttcattgaataattaatgtacctcgttataaatatagactagatacattactta 43409886  T
Q  286 tacaatgaacc 296  Q
    |||||||||||    
T  43409885 tacaatgaacc 43409875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 186 - 294
Target Start/End: Complemental strand, 9550260 - 9550152
Alignment:
Q  186 aataccccctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcactta 285  Q
    ||||||||||  || |||| ||| |||||| | ||||||||||| ||| ||||||||| |||||||| |  |  ||||||||||||||||||||||||||    
T  9550260 aataccccctttgggccttattataagaaacaattgactttttaaatttattgaataactaatgtatctcgtaataaatatagactagatacatcactta 9550161  T
Q  286 tacaatgaa 294  Q
      |||||||    
T  9550160 cccaatgaa 9550152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 197 - 291
Target Start/End: Original strand, 5356801 - 5356895
Alignment:
Q  197 cggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcacttatacaat 291  Q
    |||||||| ||| ||| || | |||||||||||||||||||| |||||||| | || |  || ||||||| || |||||||||||||||||||||    
T  5356801 cggtccttattataagcaacaattgactttttagattcattggataattaacgcatctcgttataaatatggattagatacatcacttatacaat 5356895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 193 - 251
Target Start/End: Original strand, 10839767 - 10839825
Alignment:
Q  193 cctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgta 251  Q
    ||||| |||||  ||| |||||||| |||||||||||||||||||||||||||||||||    
T  10839767 cctccagtcctatttataagaaaaaattgactttttagattcattgaataattaatgta 10839825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 187 - 244
Target Start/End: Complemental strand, 2339440 - 2339383
Alignment:
Q  187 ataccccctccggtccttgttacaagaaaaagttgactttttagattcattgaataat 244  Q
    |||| ||||||||||||  |||||||| |||||||||||||||||| |||||||||||    
T  2339440 atactccctccggtcctatttacaagagaaagttgactttttagatacattgaataat 2339383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 238 - 295
Target Start/End: Complemental strand, 40645809 - 40645752
Alignment:
Q  238 gaataattaatgtattttattgtaaatatagactagatacatcacttatacaatgaac 295  Q
    ||||||||||||||| || || |||||||||||||||||||||||||| | |||||||    
T  40645809 gaataattaatgtatcttgttataaatatagactagatacatcacttacataatgaac 40645752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 210 - 294
Target Start/End: Complemental strand, 10184678 - 10184594
Alignment:
Q  210 aagaaaaagttgactttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcacttatacaatgaa 294  Q
    |||||||| | ||||||||||||||||||||||||| |||||| | ||    ||||||||| | |||||||| ||||||||||||    
T  10184678 aagaaaaaatcgactttttagattcattgaataattgatgtatatgatccagaatatagaccaaatacatcatttatacaatgaa 10184594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 192 - 252
Target Start/End: Complemental strand, 24822868 - 24822808
Alignment:
Q  192 ccctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtat 252  Q
    ||||||||||||  ||| |||||||| ||||||||||||||| |||| |||||||||||||    
T  24822868 ccctccggtcctatttataagaaaaaattgactttttagatttattgtataattaatgtat 24822808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 193 - 245
Target Start/End: Original strand, 32575175 - 32575227
Alignment:
Q  193 cctccggtccttgttacaagaaaaagttgactttttagattcattgaataatt 245  Q
    |||||||||||  ||||||||||||||| |||||||||||||||| |||||||    
T  32575175 cctccggtcctatttacaagaaaaagttaactttttagattcattcaataatt 32575227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 187 - 287
Target Start/End: Complemental strand, 35794676 - 35794576
Alignment:
Q  187 ataccccctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcacttat 286  Q
    |||| ||||||||||||| ||| ||||||   || |||||||||||||||||| |||||||||||| || || |||| ||| | || |||||| ||||||    
T  35794676 atactccctccggtccttattataagaaactttttactttttagattcattgagtaattaatgtatcttgttataaacataaattaaatacattacttat 35794577  T
Q  287 a 287  Q
    |    
T  35794576 a 35794576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 225 - 296
Target Start/End: Complemental strand, 41624850 - 41624779
Alignment:
Q  225 ttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcacttatacaatgaacc 296  Q
    |||||| || ||||||||||||| |||| || || ||||||||||||| |||||||||||||| || |||||    
T  41624850 ttttaggttgattgaataattaacgtatgttgttataaatatagactaaatacatcacttatataaggaacc 41624779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 212 - 294
Target Start/End: Original strand, 3236353 - 3236435
Alignment:
Q  212 gaaaaagttgactttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcacttatacaatgaa 294  Q
    |||||| ||||||||||| ||||||||||||||| |||||| |  ||  |||| ||||| | |||||||| ||||||||||||    
T  3236353 gaaaaaattgactttttaaattcattgaataattgatgtatctagtttaaaatttagaccaaatacatcatttatacaatgaa 3236435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 186 - 244
Target Start/End: Complemental strand, 34028534 - 34028476
Alignment:
Q  186 aataccccctccggtccttgttacaagaaaaagttgactttttagattcattgaataat 244  Q
    ||||| ||||||||||||  |||||||| ||||||||| |||||||| |||||||||||    
T  34028534 aatactccctccggtcctatttacaagagaaagttgaccttttagatacattgaataat 34028476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 193 - 251
Target Start/End: Original strand, 35011216 - 35011274
Alignment:
Q  193 cctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgta 251  Q
    |||||||||||  ||| ||||||||||| | |||||||||||||| |||||||||||||    
T  35011216 cctccggtcctatttataagaaaaagttaattttttagattcattcaataattaatgta 35011274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 185 - 254
Target Start/End: Original strand, 22781878 - 22781947
Alignment:
Q  185 caataccccctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtattt 254  Q
    |||||| ||||||||||||  |||||||||| | || ||||||||||| |||| ||||||| ||||||||    
T  22781878 caatacaccctccggtcctatttacaagaaacaatttactttttagatacattaaataatttatgtattt 22781947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 193 - 254
Target Start/End: Complemental strand, 25848111 - 25848050
Alignment:
Q  193 cctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtattt 254  Q
    |||||||||||  |||||||| | |||||||||||||||| |||||||||||  ||||||||    
T  25848111 cctccggtcctatttacaagagacagttgactttttagatacattgaataatgtatgtattt 25848050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 222 - 295
Target Start/End: Complemental strand, 27988190 - 27988117
Alignment:
Q  222 actttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcacttatacaatgaac 295  Q
    |||||||||||||||||||||||||||||||||  ||  |  |||| || |||||||| |||||| ||||||||    
T  27988190 actttttagattcattgaataattaatgtatttagttaaatttataaacgagatacattacttattcaatgaac 27988117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 222 - 295
Target Start/End: Complemental strand, 28045492 - 28045419
Alignment:
Q  222 actttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcacttatacaatgaac 295  Q
    |||||||||||||||||||||||||||||||||  ||  |  |||| || |||||||| |||||| ||||||||    
T  28045492 actttttagattcattgaataattaatgtatttagttaaatttataaacgagatacattacttattcaatgaac 28045419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 210 - 324
Target Start/End: Original strand, 38494260 - 38494374
Alignment:
Q  210 aagaaaaagttgactttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcacttatacaatgaaccnnnnnnntcaatt 309  Q
    |||||| | ||||||||||   ||||| ||||||||||||||| || || |||||||| | |||||||| |||||| ||||| ||||       ||||||    
T  38494260 aagaaataattgactttttttgttcatagaataattaatgtatcttgttataaatataaattagatacaccacttacacaataaacctaaaaaatcaatt 38494359  T
Q  310 gtttcttataataag 324  Q
     ||||||||||||||    
T  38494360 ttttcttataataag 38494374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 187 - 244
Target Start/End: Complemental strand, 41915744 - 41915687
Alignment:
Q  187 ataccccctccggtccttgttacaagaaaaagttgactttttagattcattgaataat 244  Q
    |||| ||||||||||||  |||||||| ||| |||||||||||||| |||||||||||    
T  41915744 atactccctccggtcctatttacaagagaaaattgactttttagatacattgaataat 41915687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 261 - 323
Target Start/End: Original strand, 45180111 - 45180173
Alignment:
Q  261 aaatatagactagatacatcacttatacaatgaaccnnnnnnntcaattgtttcttataataa 323  Q
    ||||||||||||||||||||||||| ||||||||||       |||||||||| |||||||||    
T  45180111 aaatatagactagatacatcacttacacaatgaaccaaaaaagtcaattgttttttataataa 45180173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 186 - 294
Target Start/End: Original strand, 1223120 - 1223228
Alignment:
Q  186 aataccccctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcactta 285  Q
    ||||| |||||||||| |  ||| ||||||||  |||||||||||||||||||  |||||||||||| || |   |||||||||| | |||||| | |||    
T  1223120 aatactccctccggtcatatttataagaaaaaagtgactttttagattcattgtgtaattaatgtatcttgtcaaaaatatagaccaaatacataattta 1223219  T
Q  286 tacaatgaa 294  Q
    | |||||||    
T  1223220 tgcaatgaa 1223228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 213 - 281
Target Start/End: Original strand, 34711105 - 34711173
Alignment:
Q  213 aaaaagttgactttttagattcattgaataattaatgtattttattgtaaatatagactagatacatca 281  Q
    ||||| ||||||||||||||||||||| ||||| ||||||||| |   ||||||| |||| ||||||||    
T  34711105 aaaaaattgactttttagattcattgagtaattgatgtattttgtctaaaatataaactaaatacatca 34711173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 195 - 251
Target Start/End: Original strand, 44796348 - 44796404
Alignment:
Q  195 tccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgta 251  Q
    |||||||||  ||| ||||||||||| |||||||||||||||| ||||||| |||||    
T  44796348 tccggtcctatttataagaaaaagttaactttttagattcattcaataattgatgta 44796404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 192 - 244
Target Start/End: Complemental strand, 45146010 - 45145958
Alignment:
Q  192 ccctccggtccttgttacaagaaaaagttgactttttagattcattgaataat 244  Q
    ||||||||||||  |||||||| ||| |||||||||||||| |||||||||||    
T  45146010 ccctccggtcctatttacaagagaaaattgactttttagatacattgaataat 45145958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 227 - 294
Target Start/End: Complemental strand, 9420697 - 9420630
Alignment:
Q  227 ttagattcattgaataattaatgtattttattgtaaatatagactagatacatcacttatacaatgaa 294  Q
    |||| ||| ||||||||||||||||  |  || ||||||||||| |||||||| ||||||||||||||    
T  9420697 ttaggttctttgaataattaatgtacctcgttataaatatagaccagatacattacttatacaatgaa 9420630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 197 - 244
Target Start/End: Original strand, 11293195 - 11293242
Alignment:
Q  197 cggtccttgttacaagaaaaagttgactttttagattcattgaataat 244  Q
    |||||||  |||||||| |||||||||||||||||| |||||||||||    
T  11293195 cggtcctatttacaagagaaagttgactttttagatacattgaataat 11293242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 193 - 244
Target Start/End: Complemental strand, 29563802 - 29563751
Alignment:
Q  193 cctccggtccttgttacaagaaaaagttgactttttagattcattgaataat 244  Q
    |||||||||||  |||||||| |||||||||||||||||| |||| ||||||    
T  29563802 cctccggtcctatttacaagagaaagttgactttttagatacattcaataat 29563751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 193 - 244
Target Start/End: Original strand, 30923925 - 30923976
Alignment:
Q  193 cctccggtccttgttacaagaaaaagttgactttttagattcattgaataat 244  Q
    |||||||||||  |||||||| | |||||||||||||||| |||||||||||    
T  30923925 cctccggtcctatttacaagagacagttgactttttagatacattgaataat 30923976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 213 - 252
Target Start/End: Complemental strand, 42123090 - 42123051
Alignment:
Q  213 aaaaagttgactttttagattcattgaataattaatgtat 252  Q
    ||||| ||||||||||||||||||||| ||||||||||||    
T  42123090 aaaaaattgactttttagattcattgagtaattaatgtat 42123051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 193 - 244
Target Start/End: Complemental strand, 43135188 - 43135137
Alignment:
Q  193 cctccggtccttgttacaagaaaaagttgactttttagattcattgaataat 244  Q
    |||||||||||  |||||||| | |||||||||||||||| |||||||||||    
T  43135188 cctccggtcctatttacaagagacagttgactttttagatacattgaataat 43135137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 186 - 244
Target Start/End: Original strand, 2229067 - 2229125
Alignment:
Q  186 aataccccctccggtccttgttacaagaaaaagttgactttttagattcattgaataat 244  Q
    ||||| ||||||||||||  |||||||| | |||||||||||||||| || ||||||||    
T  2229067 aatactccctccggtcctatttacaagagacagttgactttttagatacaatgaataat 2229125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 224 - 254
Target Start/End: Complemental strand, 5311435 - 5311405
Alignment:
Q  224 tttttagattcattgaataattaatgtattt 254  Q
    |||||||||||||||||||||||||||||||    
T  5311435 tttttagattcattgaataattaatgtattt 5311405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 251
Target Start/End: Original strand, 22429539 - 22429597
Alignment:
Q  193 cctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgta 251  Q
    |||||||||||  ||| ||||||||||| | |||||||||| ||| |||||||||||||    
T  22429539 cctccggtcctatttataagaaaaagttaattttttagatttattcaataattaatgta 22429597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 251
Target Start/End: Original strand, 24177976 - 24178034
Alignment:
Q  193 cctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgta 251  Q
    |||||||||||  ||| ||||||||||| |||||||||||||||| |||| || |||||    
T  24177976 cctccggtcctatttataagaaaaagttaactttttagattcattcaatatttgatgta 24178034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 251
Target Start/End: Complemental strand, 36366168 - 36366110
Alignment:
Q  193 cctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgta 251  Q
    |||||||||||  ||| ||||||||||| | |||||||||||||| ||||||| |||||    
T  36366168 cctccggtcctatttataagaaaaagttaattttttagattcattcaataattgatgta 36366110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 186 - 244
Target Start/End: Original strand, 40465235 - 40465293
Alignment:
Q  186 aataccccctccggtccttgttacaagaaaaagttgactttttagattcattgaataat 244  Q
    ||||| ||||||| ||||  |||||||| ||| |||||||||||||| |||||||||||    
T  40465235 aatactccctccgatcctatttacaagagaaaattgactttttagatacattgaataat 40465293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 186 - 248
Target Start/End: Original strand, 43332557 - 43332619
Alignment:
Q  186 aataccccctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaat 248  Q
    ||||| || |||||||||  ||| |||||||  ||||||||||||||||||||| ||||||||    
T  43332557 aatactccatccggtcctatttataagaaaattttgactttttagattcattgagtaattaat 43332619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 210 - 255
Target Start/End: Complemental strand, 883745 - 883700
Alignment:
Q  210 aagaaaaagttgactttttagattcattgaataattaatgtatttt 255  Q
    |||||||||||||||||||||||| ||||  |||||||| ||||||    
T  883745 aagaaaaagttgactttttagattgattgtgtaattaatatatttt 883700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 254
Target Start/End: Complemental strand, 2229214 - 2229153
Alignment:
Q  193 cctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtattt 254  Q
    |||||||||||  |||||||| | | || ||||||||||| |||||||||||| ||||||||    
T  2229214 cctccggtcctatttacaagagacaatttactttttagatacattgaataatttatgtattt 2229153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 294
Target Start/End: Original strand, 5031468 - 5031569
Alignment:
Q  193 cctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcacttatacaatg 292  Q
    |||||||||||  ||| |||||||| || |||||||| ||||||| | ||||| |||||| || |    ||||||||||| |||||||| |||| |||||    
T  5031468 cctccggtcctatttataagaaaaatttaactttttaaattcattaagtaattgatgtatcttgtctagaatatagactaaatacatcatttatgcaatg 5031567  T
Q  293 aa 294  Q
    ||    
T  5031568 aa 5031569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 210 - 251
Target Start/End: Original strand, 12958797 - 12958838
Alignment:
Q  210 aagaaaaagttgactttttagattcattgaataattaatgta 251  Q
    ||||||||||| |||||||||||||||| ||||||| |||||    
T  12958797 aagaaaaagttaactttttagattcattcaataattgatgta 12958838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 254
Target Start/End: Complemental strand, 13831484 - 13831443
Alignment:
Q  213 aaaaagttgactttttagattcattgaataattaatgtattt 254  Q
    ||||| ||||||||||||||||||| ||||||| ||||||||    
T  13831484 aaaaaattgactttttagattcattaaataattgatgtattt 13831443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 252
Target Start/End: Complemental strand, 27871050 - 27871021
Alignment:
Q  223 ctttttagattcattgaataattaatgtat 252  Q
    ||||||||||||||||||||||||||||||    
T  27871050 ctttttagattcattgaataattaatgtat 27871021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 252
Target Start/End: Complemental strand, 27976836 - 27976807
Alignment:
Q  223 ctttttagattcattgaataattaatgtat 252  Q
    ||||||||||||||||||||||||||||||    
T  27976836 ctttttagattcattgaataattaatgtat 27976807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 252
Target Start/End: Complemental strand, 28034105 - 28034076
Alignment:
Q  223 ctttttagattcattgaataattaatgtat 252  Q
    ||||||||||||||||||||||||||||||    
T  28034105 ctttttagattcattgaataattaatgtat 28034076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 210 - 251
Target Start/End: Original strand, 42786385 - 42786426
Alignment:
Q  210 aagaaaaagttgactttttagattcattgaataattaatgta 251  Q
    ||||||||||| |||||||||||||||| ||||||| |||||    
T  42786385 aagaaaaagttaactttttagattcattcaataattgatgta 42786426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 210 - 254
Target Start/End: Complemental strand, 195720 - 195676
Alignment:
Q  210 aagaaaaagttgactttttagattcattgaataattaatgtattt 254  Q
    |||||||| ||  ||||||||||||||| ||||||||||||||||    
T  195720 aagaaaaaattatctttttagattcattaaataattaatgtattt 195676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 210 - 254
Target Start/End: Complemental strand, 310557 - 310513
Alignment:
Q  210 aagaaaaagttgactttttagattcattgaataattaatgtattt 254  Q
    |||||||| ||  ||||||||||||||| ||||||||||||||||    
T  310557 aagaaaaaattatctttttagattcattaaataattaatgtattt 310513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 222 - 254
Target Start/End: Complemental strand, 9503653 - 9503621
Alignment:
Q  222 actttttagattcattgaataattaatgtattt 254  Q
    ||||||||||||||||||||| |||||||||||    
T  9503653 actttttagattcattgaatatttaatgtattt 9503621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 224 - 294
Target Start/End: Original strand, 10107311 - 10107377
Alignment:
Q  224 tttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcacttatacaatgaa 294  Q
    |||| |||||||||||||||||||||||   ||| || ||||||||| |||||||||| |||| |||||||    
T  10107311 ttttcagattcattgaataattaatgta---tatggt-aatatagaccagatacatcagttattcaatgaa 10107377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 204 - 252
Target Start/End: Original strand, 11322574 - 11322621
Alignment:
Q  204 tgttacaagaaaaagttgactttttagattcattgaataattaatgtat 252  Q
    ||||| ||||||||||  ||||||||||| |||||||||||||||||||    
T  11322574 tgttataagaaaaagtc-actttttagatgcattgaataattaatgtat 11322621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 220 - 252
Target Start/End: Complemental strand, 14113326 - 14113294
Alignment:
Q  220 tgactttttagattcattgaataattaatgtat 252  Q
    ||||||||||||| |||||||||||||||||||    
T  14113326 tgactttttagatacattgaataattaatgtat 14113294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 192 - 232
Target Start/End: Complemental strand, 27793342 - 27793302
Alignment:
Q  192 ccctccggtccttgttacaagaaaaagttgactttttagat 232  Q
    ||||||||||||  |||||||| ||||||||||||||||||    
T  27793342 ccctccggtcctatttacaagagaaagttgactttttagat 27793302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 222 - 254
Target Start/End: Original strand, 30857258 - 30857290
Alignment:
Q  222 actttttagattcattgaataattaatgtattt 254  Q
    ||||||||||||||||||||| |||||||||||    
T  30857258 actttttagattcattgaatatttaatgtattt 30857290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 192 - 252
Target Start/End: Complemental strand, 35149813 - 35149753
Alignment:
Q  192 ccctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtat 252  Q
    |||| |||||||  ||| ||||||||||||| |||||||||| ||||  ||||||||||||    
T  35149813 cccttcggtcctatttataagaaaaagttgattttttagatttattgtgtaattaatgtat 35149753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 214 - 254
Target Start/End: Complemental strand, 38414345 - 38414305
Alignment:
Q  214 aaaagttgactttttagattcattgaataattaatgtattt 254  Q
    ||||||| |||||||||||||||| |||||| |||||||||    
T  38414345 aaaagttcactttttagattcattcaataatgaatgtattt 38414305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 192 - 244
Target Start/End: Original strand, 41569099 - 41569151
Alignment:
Q  192 ccctccggtccttgttacaagaaaaagttgactttttagattcattgaataat 244  Q
    ||||||||||||  |||||||| |||||||| |||||||||  ||||||||||    
T  41569099 ccctccggtcctatttacaagagaaagttgattttttagatatattgaataat 41569151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #73
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 186 - 238
Target Start/End: Original strand, 43932046 - 43932098
Alignment:
Q  186 aataccccctccggtccttgttacaagaaaaagttgactttttagattcattg 238  Q
    ||||| ||||||||||||| ||| |||||| | |||||||||||| |||||||    
T  43932046 aatactccctccggtccttattataagaaacaattgactttttaggttcattg 43932098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 90; Significance: 2e-43; HSPs: 64)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 186 - 324
Target Start/End: Original strand, 41487788 - 41487926
Alignment:
Q  186 aataccccctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcactta 285  Q
    ||||| ||||||||||||| ||| ||||||||||||||||||||| ||||| ||||||||||||||| ||||||||||||||||||||||||||||||||    
T  41487788 aatactccctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgtatcttattgtaaatatagactagatacatcactta 41487887  T
Q  286 tacaatgaaccnnnnnnntcaattgtttcttataataag 324  Q
     ||||||||||       |||||||||||||||||||||    
T  41487888 cacaatgaaccaaaaaaatcaattgtttcttataataag 41487926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 188 - 324
Target Start/End: Complemental strand, 29559586 - 29559450
Alignment:
Q  188 taccccctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcacttata 287  Q
    |||||| || ||||||| |||||||||| | ||||||||||||||||||||||||||||||||||||  || |||||||||||||||||||| ||||| |    
T  29559586 taccccttctggtccttattacaagaaacaattgactttttagattcattgaataattaatgtatttcgttataaatatagactagatacattacttaca 29559487  T
Q  288 caatgaaccnnnnnnntcaattgtttcttataataag 324  Q
    | |||||||       |||||||||||||||||||||    
T  29559486 cgatgaacctaaaaagtcaattgtttcttataataag 29559450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 192 - 324
Target Start/End: Original strand, 41088855 - 41088987
Alignment:
Q  192 ccctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcacttatacaat 291  Q
    ||||||||||||| |||||||||| | ||||||||||||||||||||||||||||||||||||  || |||||||||||||||||||| ||||| || ||    
T  41088855 ccctccggtccttattacaagaaacaattgactttttagattcattgaataattaatgtatttcgttataaatatagactagatacattacttacacgat 41088954  T
Q  292 gaaccnnnnnnntcaattgtttcttataataag 324  Q
     ||||       |||||||||||||||||||||    
T  41088955 taacctaaaaagtcaattgtttcttataataag 41088987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 197 - 294
Target Start/End: Complemental strand, 41395802 - 41395705
Alignment:
Q  197 cggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcacttatacaatgaa 294  Q
    |||| ||| ||| ||||||||||||||||||||||||||| ||||||||||| ||| ||||| |||||||||||||||||||||||||||||||||||    
T  41395802 cggttcttattataagaaaaagttgactttttagattcatagaataattaatatatcttattataaatatagactagatacatcacttatacaatgaa 41395705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 187 - 324
Target Start/End: Complemental strand, 47484171 - 47484034
Alignment:
Q  187 ataccccctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcacttat 286  Q
    |||| |||||| |||||| ||| ||| ||||||||||||||||| ||||| ||||||||||||||| ||||||||||||||||||||||||||||||||     
T  47484171 atactccctcctgtccttattataagtaaaagttgactttttaggttcatagaataattaatgtatcttattgtaaatatagactagatacatcacttac 47484072  T
Q  287 acaatgaaccnnnnnnntcaattgtttcttataataag 324  Q
     |||||||         |||||||||||||||||||||    
T  47484071 gcaatgaataaaaaaaatcaattgtttcttataataag 47484034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 186 - 285
Target Start/End: Original strand, 12806905 - 12807004
Alignment:
Q  186 aataccccctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcactta 285  Q
    ||||| ||||||||||||| ||| ||||||||||||||||||||| |||||  |||||||||||||| ||||||||||||||||||| ||||||||||||    
T  12806905 aatactccctccggtccttattataagaaaaagttgactttttaggttcataaaataattaatgtatcttattgtaaatatagactacatacatcactta 12807004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 192 - 294
Target Start/End: Original strand, 45123248 - 45123350
Alignment:
Q  192 ccctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcacttatacaat 291  Q
    |||||||||||||  || || ||||||||||||||||| |||||| ||||||||||||||| ||||| |||||||||| |||||||||||||||||||||    
T  45123248 ccctccggtccttactataaaaaaaagttgactttttaaattcatagaataattaatgtatcttattataaatatagattagatacatcacttatacaat 45123347  T
Q  292 gaa 294  Q
    |||    
T  45123348 gaa 45123350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 219 - 324
Target Start/End: Original strand, 22618193 - 22618298
Alignment:
Q  219 ttgactttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcacttatacaatgaaccnnnnnnntcaattgtttcttat 318  Q
    |||| |||||||||||||||| |||||||||||| || ||||||||||||||||||||||||||||| ||||||||||       |||||||||||||||    
T  22618193 ttgattttttagattcattgagtaattaatgtatcttgttgtaaatatagactagatacatcacttacacaatgaacctaaaaagtcaattgtttcttat 22618292  T
Q  319 aataag 324  Q
    ||||||    
T  22618293 aataag 22618298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 192 - 295
Target Start/End: Original strand, 18064725 - 18064828
Alignment:
Q  192 ccctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcacttatacaat 291  Q
    |||||||||||||  || ||||||||||| ||||||||  ||||| ||||||||||||||| |||||| ||||||||||||||||||||||||| |||||    
T  18064725 ccctccggtccttaatataagaaaaagttaactttttaagttcatagaataattaatgtatcttattgaaaatatagactagatacatcacttaaacaat 18064824  T
Q  292 gaac 295  Q
    ||||    
T  18064825 gaac 18064828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 192 - 324
Target Start/End: Original strand, 27320297 - 27320429
Alignment:
Q  192 ccctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcacttatacaat 291  Q
    |||||| |||||| ||| ||||||||||||||||||||  |||||  ||||||| || ||| ||||||||||||||||||||| |||| |||||||||||    
T  27320297 ccctcccgtccttattataagaaaaagttgactttttaagttcataaaataattgatatatcttattgtaaatatagactagaaacattacttatacaat 27320396  T
Q  292 gaaccnnnnnnntcaattgtttcttataataag 324  Q
    |||||       |||||||||||||||||||||    
T  27320397 gaaccaaaaaaatcaattgtttcttataataag 27320429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 219 - 294
Target Start/End: Complemental strand, 7456537 - 7456462
Alignment:
Q  219 ttgactttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcacttatacaatgaa 294  Q
    ||||||||||||||||||||| |||||||||||| || ||||||||||||||||||||||||| ||||||||||||    
T  7456537 ttgactttttagattcattgagtaattaatgtatcttgttgtaaatatagactagatacatcatttatacaatgaa 7456462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 213 - 295
Target Start/End: Complemental strand, 47280297 - 47280215
Alignment:
Q  213 aaaaagttgactttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcacttatacaatgaac 295  Q
    |||||||||||||||||| ||||| ||||||||||||||| ||||||||||||||||||| |||||| | |||||||||||||    
T  47280297 aaaaagttgactttttaggttcatagaataattaatgtatcttattgtaaatatagactaaatacattatttatacaatgaac 47280215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 192 - 285
Target Start/End: Original strand, 40198607 - 40198700
Alignment:
Q  192 ccctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcactta 285  Q
    ||||||||||||| ||| ||||||||||||||||||||| ||||| |||||||||||| || || |||||||||||||||| ||||||| ||||    
T  40198607 ccctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgcatcttgttgtaaatatagactaaatacatcgctta 40198700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 192 - 324
Target Start/End: Original strand, 10674126 - 10674258
Alignment:
Q  192 ccctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcacttatacaat 291  Q
    ||||||||| ||| ||| || ||| | |||||||||||| ||||||||||||||||||||| || || |||||||||| ||||||||||||||| | |||    
T  10674126 ccctccggtacttattataaaaaacatttgactttttaggttcattgaataattaatgtatcttgttataaatatagattagatacatcacttacataat 10674225  T
Q  292 gaaccnnnnnnntcaattgtttcttataataag 324  Q
    ||| |       |||||||||||||||||||||    
T  10674226 gaatctaaaaagtcaattgtttcttataataag 10674258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 192 - 281
Target Start/End: Complemental strand, 13860362 - 13860273
Alignment:
Q  192 ccctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtattttattgtaaatatagactagatacatca 281  Q
    ||||||| ||||| ||| |||||| | |||||||||||||||||||| ||||||||||||| || || ||||||||||||||||||||||    
T  13860362 ccctccgatccttattataagaaacaattgactttttagattcattgtataattaatgtatattgttataaatatagactagatacatca 13860273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 195 - 323
Target Start/End: Complemental strand, 37006599 - 37006470
Alignment:
Q  195 tccggtccttgttacaagaaaaag-ttgactttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcacttatacaatga 293  Q
    |||||||||| ||| ||||||||  |||||||||||  ||||| |||||||||||||||  ||||||||||||| ||| ||||||||||||||||||| |    
T  37006599 tccggtccttattataagaaaaaaattgactttttaagttcatagaataattaatgtatcatattgtaaatataaactggatacatcacttatacaataa 37006500  T
Q  294 accnnnnnnntcaattgtttcttataataa 323  Q
    ||        ||||||||||||||||||||    
T  37006499 actaaaaaagtcaattgtttcttataataa 37006470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 220 - 296
Target Start/End: Original strand, 47612321 - 47612397
Alignment:
Q  220 tgactttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcacttatacaatgaacc 296  Q
    ||||||||||| ||||||||||||||||||||| |  || |||||||||||||||||||| ||||||||||||||||    
T  47612321 tgactttttaggttcattgaataattaatgtatctcgttataaatatagactagatacattacttatacaatgaacc 47612397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 192 - 324
Target Start/End: Original strand, 24164519 - 24164651
Alignment:
Q  192 ccctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcacttatacaat 291  Q
    ||||||||||||| ||| |||||| | |||| ||||| | ||||| ||||||||||||||| || ||  ||||||||||||||||||||||||| | |||    
T  24164519 ccctccggtccttattataagaaacaattgatttttttggttcatagaataattaatgtatcttgttagaaatatagactagatacatcacttacataat 24164618  T
Q  292 gaaccnnnnnnntcaattgtttcttataataag 324  Q
    |||||       |||| ||||||||||||||||    
T  24164619 gaacctaaaaagtcaaatgtttcttataataag 24164651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 219 - 321
Target Start/End: Original strand, 39413858 - 39413960
Alignment:
Q  219 ttgactttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcacttatacaatgaaccnnnnnnntcaattgtttcttat 318  Q
    ||||||||||| ||| ||||||||||||||||||  | |||||||||| || |||||||||||||||||||||||||        |||||||||||||||    
T  39413858 ttgactttttatattaattgaataattaatgtatcatgttgtaaatattgattagatacatcacttatacaatgaacttaaaaaatcaattgtttcttat 39413957  T
Q  319 aat 321  Q
    |||    
T  39413958 aat 39413960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 219 - 324
Target Start/End: Original strand, 14543298 - 14543403
Alignment:
Q  219 ttgactttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcacttatacaatgaaccnnnnnnntcaattgtttcttat 318  Q
    |||| |||||||||||||||| |||||||||||| ||  |||||||||||||||||||||||||||| | ||| |||        |||||||||||||||    
T  14543298 ttgattttttagattcattgagtaattaatgtatcttgatgtaaatatagactagatacatcacttacataataaacttaaacaatcaattgtttcttat 14543397  T
Q  319 aataag 324  Q
    ||||||    
T  14543398 aataag 14543403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 194 - 294
Target Start/End: Original strand, 45025599 - 45025699
Alignment:
Q  194 ctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcacttatacaatga 293  Q
    ||||||||||| ||| |||||| | |||| ||||| | ||||| ||||||||||||||| || || |||||||||||||||||||||||||| | |||||    
T  45025599 ctccggtccttattataagaaacaattgatttttttggttcatagaataattaatgtatcttgttataaatatagactagatacatcacttacataatga 45025698  T
Q  294 a 294  Q
    |    
T  45025699 a 45025699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 219 - 296
Target Start/End: Complemental strand, 7999566 - 7999489
Alignment:
Q  219 ttgactttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcacttatacaatgaacc 296  Q
    |||||||||||| |||||| ||||||||||| || |  || |||||||||||||||||||||||||| ||||||||||    
T  7999566 ttgactttttaggttcattaaataattaatgcatctcgttataaatatagactagatacatcacttacacaatgaacc 7999489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 186 - 291
Target Start/End: Original strand, 28248428 - 28248533
Alignment:
Q  186 aataccccctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcactta 285  Q
    ||||| |||||  |||||| ||| |||||| | ||||| ||||||||||||||||||||||||| || |  || ||||||||||||| ||||||||||||    
T  28248428 aatactccctcgagtccttattataagaaacaattgacattttagattcattgaataattaatgcatctcgttataaatatagactatatacatcactta 28248527  T
Q  286 tacaat 291  Q
     |||||    
T  28248528 cacaat 28248533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 187 - 251
Target Start/End: Complemental strand, 2523920 - 2523856
Alignment:
Q  187 ataccccctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgta 251  Q
    |||| ||||||||||||  ||| |||||||||||||||||||||||||||||| |||||||||||    
T  2523920 atactccctccggtcctatttataagaaaaagttgactttttagattcattgagtaattaatgta 2523856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 192 - 252
Target Start/End: Complemental strand, 10007721 - 10007661
Alignment:
Q  192 ccctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtat 252  Q
    ||||||||||||  ||| ||||||||||||||||||||||||||||| |||||||||||||    
T  10007721 ccctccggtcctatttataagaaaaagttgactttttagattcattgtataattaatgtat 10007661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 231 - 324
Target Start/End: Complemental strand, 40234872 - 40234779
Alignment:
Q  231 attcattgaataattaatgtattttattgtaaatatagactagatacatcacttatacaatgaaccnnnnnnntcaattgtttcttataataag 324  Q
    ||||||||| ||||| |||||| || ||||||||||||||||||||||||| ||| |||||||| |       |||||||||||||||||||||    
T  40234872 attcattgagtaattcatgtatcttgttgtaaatatagactagatacatcagttacacaatgaatctaaaaagtcaattgtttcttataataag 40234779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 192 - 294
Target Start/End: Original strand, 33901041 - 33901143
Alignment:
Q  192 ccctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcacttatacaat 291  Q
    |||||| |||||| ||| |||||| | |||| ||||| ||||||| ||||| ||||||||| || || |||||||||||||||||||||| ||| | |||    
T  33901041 ccctcctgtccttattataagaaacaattgatttttttgattcatagaatagttaatgtatcttgttataaatatagactagatacatcatttacataat 33901140  T
Q  292 gaa 294  Q
    |||    
T  33901141 gaa 33901143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 193 - 252
Target Start/End: Complemental strand, 7107774 - 7107715
Alignment:
Q  193 cctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtat 252  Q
    |||||||||||  |||||||| |||||||||||||||||| |||||||||||| ||||||    
T  7107774 cctccggtcctatttacaagagaaagttgactttttagatacattgaataatttatgtat 7107715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 187 - 254
Target Start/End: Original strand, 23248666 - 23248733
Alignment:
Q  187 ataccccctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtattt 254  Q
    |||| ||||||||||||  |||||||| |||||||||||||||||| |||||||||||  ||||||||    
T  23248666 atactccctccggtcctatttacaagataaagttgactttttagatacattgaataatatatgtattt 23248733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 198 - 324
Target Start/End: Complemental strand, 3633330 - 3633204
Alignment:
Q  198 ggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcacttatacaatgaaccn 297  Q
    ||||||| ||| |||||| | |||||||||||| |||||||  ||| | |||||| |  || ||||| |||||||||||||||||||| | ||||||||     
T  3633330 ggtccttattataagaaatatttgactttttaggttcattgtttaagtgatgtatctcgttataaatgtagactagatacatcacttaaataatgaacct 3633231  T
Q  298 nnnnnntcaattgtttcttataataag 324  Q
          |||| ||||||||||||||||    
T  3633230 aaaaagtcaaatgtttcttataataag 3633204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 187 - 244
Target Start/End: Complemental strand, 20397965 - 20397908
Alignment:
Q  187 ataccccctccggtccttgttacaagaaaaagttgactttttagattcattgaataat 244  Q
    |||| ||||||||||||  |||||||| |||||||||||||||||| |||||||||||    
T  20397965 atactccctccggtcctatttacaagagaaagttgactttttagatacattgaataat 20397908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 222 - 291
Target Start/End: Complemental strand, 29835199 - 29835130
Alignment:
Q  222 actttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcacttatacaat 291  Q
    ||||||||||||||||||||||||||| ||| |  ||||||||||| | ||||||||||| ||| |||||    
T  29835199 actttttagattcattgaataattaatatatctcgttgtaaatataaattagatacatcatttacacaat 29835130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 224 - 281
Target Start/End: Complemental strand, 31903063 - 31903006
Alignment:
Q  224 tttttagattcattgaataattaatgtattttattgtaaatatagactagatacatca 281  Q
    ||||||| |||||||||||||||||||||||  |  ||||||||||||||||||||||    
T  31903063 tttttaggttcattgaataattaatgtatttcgtcataaatatagactagatacatca 31903006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 238 - 324
Target Start/End: Complemental strand, 33039659 - 33039573
Alignment:
Q  238 gaataattaatgtattttattgtaaatatagactagatacatcacttatacaatgaaccnnnnnnntcaattgtttcttataataag 324  Q
    |||||||||||||||  | |||||||||||||||||||||||| || | ||||||||||       ||||||||||||| |||||||    
T  33039659 gaataattaatgtatcatgttgtaaatatagactagatacatccctaacacaatgaacctaaaaagtcaattgtttcttttaataag 33039573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 210 - 254
Target Start/End: Complemental strand, 29365748 - 29365704
Alignment:
Q  210 aagaaaaagttgactttttagattcattgaataattaatgtattt 254  Q
    |||||||| ||||||||||||||||||||| ||||||||||||||    
T  29365748 aagaaaaaattgactttttagattcattgagtaattaatgtattt 29365704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 210 - 254
Target Start/End: Original strand, 41850617 - 41850661
Alignment:
Q  210 aagaaaaagttgactttttagattcattgaataattaatgtattt 254  Q
    ||||||||||| | |||||||||||||||||||||||||||||||    
T  41850617 aagaaaaagttaattttttagattcattgaataattaatgtattt 41850661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 197 - 252
Target Start/End: Original strand, 24932391 - 24932446
Alignment:
Q  197 cggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtat 252  Q
    |||||||| ||| |||||||| |||||||||||| ||||| |||||||||||||||    
T  24932391 cggtccttattataagaaaaaattgactttttaggttcatagaataattaatgtat 24932446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 193 - 251
Target Start/End: Complemental strand, 27231977 - 27231919
Alignment:
Q  193 cctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgta 251  Q
    |||||||||||  ||| ||||||||||| |||||||||||||||| ||||||| |||||    
T  27231977 cctccggtcctatttataagaaaaagttaactttttagattcattcaataattgatgta 27231919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 192 - 254
Target Start/End: Original strand, 34281672 - 34281734
Alignment:
Q  192 ccctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtattt 254  Q
    ||||||||||||  |||||||| ||||||||||||||| || |||||||||||  ||||||||    
T  34281672 ccctccggtcctatttacaagagaaagttgactttttacatacattgaataatgtatgtattt 34281734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 192 - 294
Target Start/End: Complemental strand, 36245521 - 36245419
Alignment:
Q  192 ccctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcacttatacaat 291  Q
    |||||| |||||  ||| |||||||| ||||||||||||||||||||| ||||| |||||| || |    ||||||||| | |||||||| |||| ||||    
T  36245521 ccctcctgtcctatttataagaaaaaattgactttttagattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatttatgcaat 36245422  T
Q  292 gaa 294  Q
    |||    
T  36245421 gaa 36245419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 210 - 252
Target Start/End: Original strand, 48082820 - 48082862
Alignment:
Q  210 aagaaaaagttgactttttagattcattgaataattaatgtat 252  Q
    |||||||||||||||||||||||||||||  ||||||||||||    
T  48082820 aagaaaaagttgactttttagattcattgtgtaattaatgtat 48082862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 192 - 245
Target Start/End: Original strand, 13807245 - 13807298
Alignment:
Q  192 ccctccggtccttgttacaagaaaaagttgactttttagattcattgaataatt 245  Q
    |||||||||| |  ||| |||||||||||||||||||||||||||||| |||||    
T  13807245 ccctccggtcttatttataagaaaaagttgactttttagattcattgagtaatt 13807298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 195 - 252
Target Start/End: Complemental strand, 18672234 - 18672177
Alignment:
Q  195 tccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtat 252  Q
    |||||||||| |||||| ||||| ||||| |||||||| |||||||||||| ||||||    
T  18672234 tccggtcctttttacaaaaaaaaattgacattttagatacattgaataatttatgtat 18672177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 210 - 294
Target Start/End: Complemental strand, 34118066 - 34117982
Alignment:
Q  210 aagaaaaagttgactttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcacttatacaatgaa 294  Q
    |||||||||||||||||||| ||||||||  |||||||||||| || |    ||||||||| | |||||||| |||| |||||||    
T  34118066 aagaaaaagttgactttttaaattcattgtgtaattaatgtatcttgtctagaatatagaccaaatacatcatttatgcaatgaa 34117982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 219 - 254
Target Start/End: Original strand, 28936084 - 28936119
Alignment:
Q  219 ttgactttttagattcattgaataattaatgtattt 254  Q
    ||||||||||||||| ||||||||||||||||||||    
T  28936084 ttgactttttagatttattgaataattaatgtattt 28936119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 251
Target Start/End: Original strand, 4826766 - 4826824
Alignment:
Q  193 cctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgta 251  Q
    ||||| |||||  ||| ||||||||||| |||||||||||||||| ||||||| |||||    
T  4826766 cctccagtcctatttataagaaaaagttaactttttagattcattcaataattgatgta 4826824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 194 - 252
Target Start/End: Original strand, 7456424 - 7456482
Alignment:
Q  194 ctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtat 252  Q
    ||||||||||| ||| |||||| | |||||||||||||||||||| |||| | ||||||    
T  7456424 ctccggtccttattataagaaatatttgactttttagattcattgtataaatgatgtat 7456482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 186 - 244
Target Start/End: Complemental strand, 12763380 - 12763322
Alignment:
Q  186 aataccccctccggtccttgttacaagaaaaagttgactttttagattcattgaataat 244  Q
    ||||| |||||||||| |  |||||||| ||| |||||||||||||| |||||||||||    
T  12763380 aatactccctccggtcttatttacaagagaaaattgactttttagatacattgaataat 12763322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 222 - 252
Target Start/End: Complemental strand, 17801493 - 17801463
Alignment:
Q  222 actttttagattcattgaataattaatgtat 252  Q
    |||||||||||||||||||||||||||||||    
T  17801493 actttttagattcattgaataattaatgtat 17801463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 192 - 294
Target Start/End: Complemental strand, 28677462 - 28677360
Alignment:
Q  192 ccctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcacttatacaat 291  Q
    ||||||| ||||  ||| |||||||| ||||||||||||||| ||||| ||||| |||||| || |    ||||||||| | |||||||| |||| ||||    
T  28677462 ccctccgatcctatttataagaaaaaattgactttttagatttattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatttatgcaat 28677363  T
Q  292 gaa 294  Q
    |||    
T  28677362 gaa 28677360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 216 - 254
Target Start/End: Original strand, 46449805 - 46449843
Alignment:
Q  216 aagttgactttttagattcattgaataattaatgtattt 254  Q
    ||||||||||||||||| |||||||||||| ||||||||    
T  46449805 aagttgactttttagatacattgaataatttatgtattt 46449843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 187 - 244
Target Start/End: Original strand, 5347721 - 5347778
Alignment:
Q  187 ataccccctccggtccttgttacaagaaaaagttgactttttagattcattgaataat 244  Q
    |||| ||||||||||||  ||| |||| |||||||||||||||||| |||| ||||||    
T  5347721 atactccctccggtcctatttataagagaaagttgactttttagatacattcaataat 5347778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 197 - 294
Target Start/End: Complemental strand, 8566221 - 8566124
Alignment:
Q  197 cggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcacttatacaatgaa 294  Q
    |||||||  ||| |||||||| |||| |||||||||||||||| ||||| |||||| || |    ||||||||| | |||||||| |||| |||||||    
T  8566221 cggtcctatttataagaaaaatttgattttttagattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatttatgcaatgaa 8566124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 219 - 252
Target Start/End: Original strand, 16861542 - 16861575
Alignment:
Q  219 ttgactttttagattcattgaataattaatgtat 252  Q
    ||||||||||||||||||||||||||| ||||||    
T  16861542 ttgactttttagattcattgaataattgatgtat 16861575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 187 - 252
Target Start/End: Original strand, 34840608 - 34840673
Alignment:
Q  187 ataccccctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtat 252  Q
    |||| |||||||||| || ||| ||| ||||||| |||||||||||||||| ||||| | ||||||    
T  34840608 atactccctccggtcattattataagcaaaagttcactttttagattcattcaataaatgatgtat 34840673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 211 - 251
Target Start/End: Complemental strand, 1366720 - 1366680
Alignment:
Q  211 agaaaaagttgactttttagattcattgaataattaatgta 251  Q
    |||||||||| |||||||||||||||| ||||||| |||||    
T  1366720 agaaaaagttaactttttagattcattcaataattgatgta 1366680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 192 - 252
Target Start/End: Original strand, 21857068 - 21857128
Alignment:
Q  192 ccctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtat 252  Q
    ||||||||||  | ||| ||| ||||||| ||||||||||  |||||||||||||||||||    
T  21857068 ccctccggtcactattataagcaaaagtttactttttagacacattgaataattaatgtat 21857128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 186 - 254
Target Start/End: Original strand, 28677314 - 28677382
Alignment:
Q  186 aataccccctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtattt 254  Q
    ||||| ||||||||||||  ||| |||||| | |||||||||| ||||||||| |||| | ||||||||    
T  28677314 aatactccctccggtcctatttataagaaacatttgacttttttgattcattgcataaatgatgtattt 28677382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 210 - 254
Target Start/End: Original strand, 30823730 - 30823774
Alignment:
Q  210 aagaaaaagttgactttttagattcattgaataattaatgtattt 254  Q
    |||||||  |||||||||||||||||||||  |||||||||||||    
T  30823730 aagaaaattttgactttttagattcattgagaaattaatgtattt 30823774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 186 - 254
Target Start/End: Original strand, 36245373 - 36245441
Alignment:
Q  186 aataccccctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtattt 254  Q
    ||||| ||||||||||||  ||| |||||| | |||||||||| ||||||||| |||| | ||||||||    
T  36245373 aatactccctccggtcctgtttataagaaacatttgacttttttgattcattgcataaatgatgtattt 36245441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 192 - 252
Target Start/End: Complemental strand, 40142918 - 40142858
Alignment:
Q  192 ccctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtat 252  Q
    ||||||||||||   || |||||||| |||| |||||||||| |||| |||||||||||||    
T  40142918 ccctccggtcctatgtataagaaaaaattgattttttagatttattgtataattaatgtat 40142858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 222 - 254
Target Start/End: Original strand, 40362003 - 40362035
Alignment:
Q  222 actttttagattcattgaataattaatgtattt 254  Q
    |||||||||||||||||||||||| ||||||||    
T  40362003 actttttagattcattgaataattgatgtattt 40362035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 219 - 267
Target Start/End: Original strand, 40599952 - 40600000
Alignment:
Q  219 ttgactttttagattcattgaataattaatgtattttattgtaaatata 267  Q
    ||||||||||||||||| | ||||||||||||||||  || ||||||||    
T  40599952 ttgactttttagattcaataaataattaatgtatttcgttataaatata 40600000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 210 - 294
Target Start/End: Original strand, 45533251 - 45533335
Alignment:
Q  210 aagaaaaagttgactttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcacttatacaatgaa 294  Q
    |||||||| |||||||||||||||||||   |||||||||||| || |    ||||||||| | |||||| | ||||||||||||    
T  45533251 aagaaaaaattgactttttagattcattatgtaattaatgtatcttgtctagaatatagaccaaatacattatttatacaatgaa 45533335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 87; Significance: 1e-41; HSPs: 62)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 193 - 324
Target Start/End: Original strand, 20502091 - 20502222
Alignment:
Q  193 cctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcacttatacaatg 292  Q
    |||||||||||| ||| ||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||| ||||||    
T  20502091 cctccggtccttattataagaaaaagttgactttttagattcatagaataattaatgtatcttattgtaaatatagactagatacatcacttacacaatg 20502190  T
Q  293 aaccnnnnnnntcaattgtttcttataataag 324  Q
    ||||       | |||||||||||||||||||    
T  20502191 aaccaaaaaaattaattgtttcttataataag 20502222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 187 - 324
Target Start/End: Original strand, 29451891 - 29452027
Alignment:
Q  187 ataccccctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcacttat 286  Q
    |||| ||||||||||||| ||| ||||||||||||| ||||||||||||| ||||||||||||||| |||||||||||||| |||||||||||||||||     
T  29451891 atactccctccggtccttattataagaaaaagttgattttttagattcatagaataattaatgtatcttattgtaaatatatactagatacatcacttac 29451990  T
Q  287 acaatgaaccnnnnnnntcaattgtttcttataataag 324  Q
    ||||||||||       |||||||||||||||||||||    
T  29451991 acaatgaacc-aaaaaatcaattgtttcttataataag 29452027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 192 - 324
Target Start/End: Original strand, 38978745 - 38978877
Alignment:
Q  192 ccctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcacttatacaat 291  Q
    |||||| |||||| ||| ||||||||||||||||||||||||||| ||||||||||| ||| |||||||||||||||||||||||||||||||| |||||    
T  38978745 ccctccagtccttattataagaaaaagttgactttttagattcatagaataattaatatatcttattgtaaatatagactagatacatcacttacacaat 38978844  T
Q  292 gaaccnnnnnnntcaattgtttcttataataag 324  Q
    |||||       | |||||||||||||||||||    
T  38978845 gaaccaaaaaaattaattgtttcttataataag 38978877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 193 - 324
Target Start/End: Complemental strand, 29874461 - 29874330
Alignment:
Q  193 cctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcacttatacaatg 292  Q
    ||||||||||||  || ||||||||||| ||||||||| ||||| |||||||||||||||||||||  ||||||||||||||||||||||||| ||||||    
T  29874461 cctccggtccttaatataagaaaaagttaactttttaggttcatagaataattaatgtattttattaaaaatatagactagatacatcacttaaacaatg 29874362  T
Q  293 aaccnnnnnnntcaattgtttcttataataag 324  Q
    ||||       |||||||||||||||| ||||    
T  29874361 aaccaaaaaagtcaattgtttcttatattaag 29874330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 193 - 296
Target Start/End: Complemental strand, 33247435 - 33247333
Alignment:
Q  193 cctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcacttatacaatg 292  Q
    |||||||||||||||| ||||||||||||||||||||| |||||  |||||||||| ||| ||||||||||||||||||||||| |||||||||| ||||    
T  33247435 cctccggtccttgttataagaaaaagttgactttttaggttcata-aataattaatatatcttattgtaaatatagactagatatatcacttatagaatg 33247337  T
Q  293 aacc 296  Q
    ||||    
T  33247336 aacc 33247333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 186 - 324
Target Start/End: Original strand, 7537018 - 7537156
Alignment:
Q  186 aataccccctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcactta 285  Q
    ||||| ||||||||| ||| ||| |||||||| ||||||| |||| || || ||||||||||||||| |||| ||||||||| |||||||||||||||||    
T  7537018 aatactccctccggttcttattataagaaaaaattgacttcttaggttaatagaataattaatgtatcttatcgtaaatatatactagatacatcactta 7537117  T
Q  286 tacaatgaaccnnnnnnntcaattgtttcttataataag 324  Q
     ||||||||||       |||||||||| ||||||||||    
T  7537118 cacaatgaaccaaaaaaatcaattgttttttataataag 7537156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 186 - 285
Target Start/End: Original strand, 19211277 - 19211376
Alignment:
Q  186 aataccccctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcactta 285  Q
    ||||| ||||||||||||| ||| ||||||   ||||||||||| ||||||||| |||||||||||| || |||||||||||||||||||||||||||||    
T  19211277 aatactccctccggtccttattataagaaacttttgactttttatattcattgagtaattaatgtatcttgttgtaaatatagactagatacatcactta 19211376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 187 - 323
Target Start/End: Original strand, 35204922 - 35205057
Alignment:
Q  187 ataccccctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcacttat 286  Q
    |||| |||||| || ||| ||| ||||||||||||| ||||||| ||||| ||||||||||||||| ||||||||||||||| ||||||||||| ||||     
T  35204922 atactccctcctgtacttattataagaaaaagttga-tttttaggttcatagaataattaatgtatcttattgtaaatatagtctagatacatcccttac 35205020  T
Q  287 acaatgaaccnnnnnnntcaattgtttcttataataa 323  Q
    |||||||||        ||||||||||||||||||||    
T  35205021 acaatgaactaaaaaagtcaattgtttcttataataa 35205057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 187 - 323
Target Start/End: Complemental strand, 35212237 - 35212102
Alignment:
Q  187 ataccccctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcacttat 286  Q
    |||| |||||| || ||| ||| ||||||||||||| ||||||| ||||| ||||||||||||||| ||||||||||||||| ||||||||||| ||||     
T  35212237 atactccctcctgtacttattataagaaaaagttga-tttttaggttcatagaataattaatgtatcttattgtaaatatagtctagatacatcccttac 35212139  T
Q  287 acaatgaaccnnnnnnntcaattgtttcttataataa 323  Q
    |||||||||        ||||||||||||||||||||    
T  35212138 acaatgaactaaaaaagtcaattgtttcttataataa 35212102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 192 - 294
Target Start/End: Complemental strand, 32455284 - 32455182
Alignment:
Q  192 ccctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcacttatacaat 291  Q
    |||||| |||||| ||| ||||||||||| || |||||  ||||| ||||||||||||||| |||||||||||||||||||||||||||||||  |||||    
T  32455284 ccctccagtccttattataagaaaaagttaacattttaagttcatagaataattaatgtatcttattgtaaatatagactagatacatcacttccacaat 32455185  T
Q  292 gaa 294  Q
    |||    
T  32455184 gaa 32455182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 198 - 295
Target Start/End: Complemental strand, 24173559 - 24173462
Alignment:
Q  198 ggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcacttatacaatgaac 295  Q
    ||||||| ||| ||||||||||||||||||||  || || ||||||||||||||| |||||| ||||||||| ||||||||||||||| |||||||||    
T  24173559 ggtccttattataagaaaaagttgactttttaagtttatagaataattaatgtatcttattgaaaatatagattagatacatcacttacacaatgaac 24173462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 199 - 320
Target Start/End: Complemental strand, 29002880 - 29002759
Alignment:
Q  199 gtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcacttatacaatgaaccnn 298  Q
    |||||| ||| ||||||||||||| ||||||| || || ||||||||||| ||| |||| | ||||||||||||||||||||||||| ||||||||||      
T  29002880 gtccttattataagaaaaagttgattttttaggtttatggaataattaatatatcttatcgaaaatatagactagatacatcacttacacaatgaaccaa 29002781  T
Q  299 nnnnntcaattgtttcttataa 320  Q
         |||||||||||||||||    
T  29002780 aaaagtcaattgtttcttataa 29002759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 191 - 291
Target Start/End: Complemental strand, 33970803 - 33970703
Alignment:
Q  191 cccctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcacttatacaa 290  Q
    |||||||||||||| ||| ||||||||||||| | ||||| ||||| |||||||||||||||||||||  ||||||| |||| |||||||| ||||||||    
T  33970803 cccctccggtccttattataagaaaaagttgattgtttagtttcatagaataattaatgtattttattaaaaatatatactaaatacatcatttatacaa 33970704  T
Q  291 t 291  Q
    |    
T  33970703 t 33970703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 192 - 324
Target Start/End: Complemental strand, 9630380 - 9630248
Alignment:
Q  192 ccctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcacttatacaat 291  Q
    |||||||||| || ||| || ||||| |||| ||||||||||||| ||||||||||||||| ||||||||||||||  ||| ||| |||||||| |||||    
T  9630380 ccctccggtctttattataacaaaaaattgattttttagattcatagaataattaatgtatcttattgtaaatataatctaaatatatcacttacacaat 9630281  T
Q  292 gaaccnnnnnnntcaattgtttcttataataag 324  Q
    |||||       | |||||||||||||||||||    
T  9630280 gaaccaaaaaaattaattgtttcttataataag 9630248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 192 - 324
Target Start/End: Original strand, 13932464 - 13932596
Alignment:
Q  192 ccctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcacttatacaat 291  Q
    ||||||||||||||||| |||||| | |||||||||||  ||||||| ||||||||||||| |  || |||||| ||||||||||||||||||| ||| |    
T  13932464 ccctccggtccttgttataagaaacaattgactttttatgttcattggataattaatgtatctcgttataaatagagactagatacatcacttacacagt 13932563  T
Q  292 gaaccnnnnnnntcaattgtttcttataataag 324  Q
    |||||       |||||| ||||||||||||||    
T  13932564 gaacctaaaaagtcaattatttcttataataag 13932596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 192 - 324
Target Start/End: Original strand, 27600762 - 27600893
Alignment:
Q  192 ccctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcacttatacaat 291  Q
    |||||||||| || ||| |||||||| |||||||||||  ||||| ||||||||||||||| |||||||||||||||| |||||| |||||||| |||||    
T  27600762 ccctccggtctttattataagaaaaa-ttgactttttaagttcatagaataattaatgtatcttattgtaaatatagattagataaatcacttacacaat 27600860  T
Q  292 gaaccnnnnnnntcaattgtttcttataataag 324  Q
    ||| |       |||||| ||||||||||||||    
T  27600861 gaatcaaaaaaatcaattatttcttataataag 27600893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 210 - 295
Target Start/End: Original strand, 5355572 - 5355657
Alignment:
Q  210 aagaaaaagttgactttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcacttatacaatgaac 295  Q
    ||||||||||| || |||||| ||||| ||||||||||||||| |||||||||||||| |||| |||||||||||| |||||||||    
T  5355572 aagaaaaagttaacattttaggttcatagaataattaatgtatcttattgtaaatataaactaaatacatcacttacacaatgaac 5355657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 187 - 251
Target Start/End: Complemental strand, 13789882 - 13789818
Alignment:
Q  187 ataccccctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgta 251  Q
    |||| ||||||||| ||  ||| |||||||||||||||||| |||||||||||||||||||||||    
T  13789882 atactccctccggttctatttataagaaaaagttgacttttcagattcattgaataattaatgta 13789818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 186 - 254
Target Start/End: Complemental strand, 26898342 - 26898274
Alignment:
Q  186 aataccccctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtattt 254  Q
    ||||| ||||||||||||  |||||||| |||||||||||||||||| |||||||||||  ||||||||    
T  26898342 aatactccctccggtcctatttacaagagaaagttgactttttagatgcattgaataatgtatgtattt 26898274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 187 - 294
Target Start/End: Original strand, 29299355 - 29299462
Alignment:
Q  187 ataccccctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcacttat 286  Q
    |||| ||||||||||||  ||| |||||||| |||| |||||||||||||||| | ||| ||||||||| |   ||||||||||   |||||||| ||||    
T  29299355 atactccctccggtcctatttataagaaaaatttgattttttagattcattgagtgattgatgtattttgtctaaaatatagaccgaatacatcatttat 29299454  T
Q  287 acaatgaa 294  Q
    ||||||||    
T  29299455 acaatgaa 29299462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 192 - 251
Target Start/End: Original strand, 38394431 - 38394490
Alignment:
Q  192 ccctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgta 251  Q
    ||||||| ||||  ||| |||||||| |||||||||||||||||||||||||||||||||    
T  38394431 ccctccgatcctatttataagaaaaaattgactttttagattcattgaataattaatgta 38394490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 197 - 290
Target Start/End: Complemental strand, 35318654 - 35318561
Alignment:
Q  197 cggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcacttatacaa 290  Q
    |||||||| |||||||||| | |||| ||||||  || |||||||||||||||||| |  || ||||||| |||||||||||| | ||||||||    
T  35318654 cggtccttattacaagaaacaattgattttttaagtttattgaataattaatgtatctcgttataaatatggactagatacattatttatacaa 35318561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 187 - 324
Target Start/End: Complemental strand, 73934 - 73797
Alignment:
Q  187 ataccccctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcacttat 286  Q
    |||| |||||||||| || ||| |||||| | ||||||||| || ||||||||||||||||| ||| |  || |||| | ||| ||||||||||| |||     
T  73934 atactccctccggtctttattataagaaacaattgacttttcaggttcattgaataattaatatatctcgttataaacaaagagtagatacatcatttac 73835  T
Q  287 acaatgaaccnnnnnnntcaattgtttcttataataag 324  Q
    |||||||| |       |||||||||| ||||||||||    
T  73834 acaatgaatctaaaaagtcaattgttttttataataag 73797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 187 - 251
Target Start/End: Complemental strand, 3814121 - 3814057
Alignment:
Q  187 ataccccctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgta 251  Q
    |||| |||||||||| |  ||| |||||||| |||||||||||||||| ||||||||||||||||    
T  3814121 atactccctccggtcttgtttataagaaaaaattgactttttagattcgttgaataattaatgta 3814057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 192 - 244
Target Start/End: Original strand, 31802961 - 31803013
Alignment:
Q  192 ccctccggtccttgttacaagaaaaagttgactttttagattcattgaataat 244  Q
    ||||||||||||  |||||||| |||||||||||||||||| |||||||||||    
T  31802961 ccctccggtcctatttacaagagaaagttgactttttagatacattgaataat 31803013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 193 - 252
Target Start/End: Original strand, 15968315 - 15968374
Alignment:
Q  193 cctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtat 252  Q
    |||||||||||  ||| ||||||||||| | |||||||||||||| ||||||||||||||    
T  15968315 cctccggtcctatttataagaaaaagttaattttttagattcattcaataattaatgtat 15968374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 193 - 251
Target Start/End: Complemental strand, 22731402 - 22731344
Alignment:
Q  193 cctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgta 251  Q
    |||||||||||  ||| ||||||||||| | |||||||||||||| |||||||||||||    
T  22731402 cctccggtcctatttataagaaaaagttaattttttagattcattaaataattaatgta 22731344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 186 - 244
Target Start/End: Complemental strand, 25027845 - 25027787
Alignment:
Q  186 aataccccctccggtccttgttacaagaaaaagttgactttttagattcattgaataat 244  Q
    ||||| ||||||||||||  |||||||| | |||||||||||||||| |||||||||||    
T  25027845 aatactccctccggtcctatttacaagagacagttgactttttagatacattgaataat 25027787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 186 - 244
Target Start/End: Complemental strand, 29374321 - 29374263
Alignment:
Q  186 aataccccctccggtccttgttacaagaaaaagttgactttttagattcattgaataat 244  Q
    ||||| ||||||||||||  |||||||| | |||||||||||||||| |||||||||||    
T  29374321 aatactccctccggtcctatttacaagagacagttgactttttagatacattgaataat 29374263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 187 - 244
Target Start/End: Original strand, 903964 - 904021
Alignment:
Q  187 ataccccctccggtccttgttacaagaaaaagttgactttttagattcattgaataat 244  Q
    |||| ||||||||||||  |||||||| ||||||||||||||||||  ||||||||||    
T  903964 atactccctccggtcctatttacaagagaaagttgactttttagatatattgaataat 904021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 195 - 244
Target Start/End: Original strand, 9601599 - 9601648
Alignment:
Q  195 tccggtccttgttacaagaaaaagttgactttttagattcattgaataat 244  Q
    |||||||||  |||||||| |||||||||||||||||| |||||||||||    
T  9601599 tccggtcctatttacaagagaaagttgactttttagatacattgaataat 9601648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 186 - 291
Target Start/End: Original strand, 13278883 - 13278988
Alignment:
Q  186 aataccccctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcactta 285  Q
    ||||| |||| ||||| |||||| |||||| | |||| ||||||| || |||||||| |||||| || |  || |||||||| | |||||||||||||||    
T  13278883 aatactcccttcggtctttgttataagaaacaattgattttttaggtttattgaatagttaatgcatctcgttataaatataaattagatacatcactta 13278982  T
Q  286 tacaat 291  Q
     |||||    
T  13278983 cacaat 13278988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 222 - 254
Target Start/End: Original strand, 892580 - 892612
Alignment:
Q  222 actttttagattcattgaataattaatgtattt 254  Q
    |||||||||||||||||||||||||||||||||    
T  892580 actttttagattcattgaataattaatgtattt 892612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 192 - 287
Target Start/End: Original strand, 11931972 - 11932068
Alignment:
Q  192 ccctccggtccttgttacaagaaaaag-ttgactttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcacttata 287  Q
    ||||||||||||  ||| ||||||||  ||||||||||||||||||||  |||||||||||| || |   |||||||||| | |||||||| |||||    
T  11931972 ccctccggtcctatttataagaaaaaaattgactttttagattcattgtgtaattaatgtatcttgtctaaaatatagaccaaatacatcatttata 11932068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 222 - 254
Target Start/End: Complemental strand, 22398156 - 22398124
Alignment:
Q  222 actttttagattcattgaataattaatgtattt 254  Q
    |||||||||||||||||||||||||||||||||    
T  22398156 actttttagattcattgaataattaatgtattt 22398124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 192 - 244
Target Start/End: Original strand, 37699783 - 37699835
Alignment:
Q  192 ccctccggtccttgttacaagaaaaagttgactttttagattcattgaataat 244  Q
    ||||||||||||  |||||||| | |||||||||||||||| |||||||||||    
T  37699783 ccctccggtcctatttacaagagacagttgactttttagatacattgaataat 37699835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 192 - 244
Target Start/End: Complemental strand, 41815330 - 41815278
Alignment:
Q  192 ccctccggtccttgttacaagaaaaagttgactttttagattcattgaataat 244  Q
    |||| |||||||  |||||||| |||||||||||||||||| |||||||||||    
T  41815330 cccttcggtcctatttacaagagaaagttgactttttagatacattgaataat 41815278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 194 - 254
Target Start/End: Original strand, 42311815 - 42311875
Alignment:
Q  194 ctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtattt 254  Q
    ||||||||||  |||||||||||| ||||||||||| || |||||||||||  ||||||||    
T  42311815 ctccggtcctatttacaagaaaaaattgactttttaaatacattgaataatgtatgtattt 42311875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 197 - 244
Target Start/End: Complemental strand, 7750058 - 7750011
Alignment:
Q  197 cggtccttgttacaagaaaaagttgactttttagattcattgaataat 244  Q
    |||||||  |||||||| |||||||||||||||||| |||||||||||    
T  7750058 cggtcctatttacaagagaaagttgactttttagatacattgaataat 7750011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 193 - 252
Target Start/End: Complemental strand, 14338959 - 14338900
Alignment:
Q  193 cctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtat 252  Q
    |||||||| ||| |||||||| ||| || ||||||||||| |||||||||||| ||||||    
T  14338959 cctccggttctttttacaagagaaatttaactttttagatacattgaataatttatgtat 14338900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 192 - 251
Target Start/End: Complemental strand, 29031181 - 29031122
Alignment:
Q  192 ccctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgta 251  Q
    ||||||||||||  ||| ||||||||||| |||||||||||||||| || |||| |||||    
T  29031181 ccctccggtcctatttataagaaaaagttaactttttagattcattcaacaattgatgta 29031122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 186 - 244
Target Start/End: Complemental strand, 1015306 - 1015248
Alignment:
Q  186 aataccccctccggtccttgttacaagaaaaagttgactttttagattcattgaataat 244  Q
    ||||| ||||||||| ||  ||| ||||||||||| |||||||||||||||| ||||||    
T  1015306 aatactccctccggttctatttataagaaaaagttaactttttagattcattcaataat 1015248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 186 - 244
Target Start/End: Complemental strand, 13145031 - 13144973
Alignment:
Q  186 aataccccctccggtccttgttacaagaaaaagttgactttttagattcattgaataat 244  Q
    ||||| ||||||||||||  |||||||| | |||||| ||||||||| |||||||||||    
T  13145031 aatactccctccggtcctatttacaagagacagttgattttttagatacattgaataat 13144973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 206 - 244
Target Start/End: Original strand, 15569348 - 15569386
Alignment:
Q  206 ttacaagaaaaagttgactttttagattcattgaataat 244  Q
    |||||||| |||||||||||||||||| |||||||||||    
T  15569348 ttacaagagaaagttgactttttagatacattgaataat 15569386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 213 - 251
Target Start/End: Complemental strand, 19296082 - 19296044
Alignment:
Q  213 aaaaagttgactttttagattcattgaataattaatgta 251  Q
    ||||||||||||||||||||||||||| ||| |||||||    
T  19296082 aaaaagttgactttttagattcattgagtaactaatgta 19296044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 192 - 254
Target Start/End: Complemental strand, 31803103 - 31803041
Alignment:
Q  192 ccctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtattt 254  Q
    ||||||||||||  |||||||||| | || ||||||||||| |||| ||||||| ||||||||    
T  31803103 ccctccggtcctatttacaagaaacaatttactttttagatacattaaataatttatgtattt 31803041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 186 - 244
Target Start/End: Original strand, 36417044 - 36417102
Alignment:
Q  186 aataccccctccggtccttgttacaagaaaaagttgactttttagattcattgaataat 244  Q
    ||||| ||||||||||||  |||||||| ||| ||||||||||| || |||||||||||    
T  36417044 aatactccctccggtcctatttacaagagaaatttgactttttaaatacattgaataat 36417102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 186 - 244
Target Start/End: Original strand, 36418982 - 36419040
Alignment:
Q  186 aataccccctccggtccttgttacaagaaaaagttgactttttagattcattgaataat 244  Q
    ||||| ||||||||||||  |||||||| |||||||| ||||| ||| |||||||||||    
T  36418982 aatactccctccggtcctatttacaagataaagttgatttttttgatacattgaataat 36419040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 288
Target Start/End: Complemental strand, 579718 - 579661
Alignment:
Q  231 attcattgaataattaatgtattttattgtaaatatagactagatacatcacttatac 288  Q
    ||||||| ||||||| ||||||||||||   |||||| ||||||||||||| ||||||    
T  579718 attcattcaataatttatgtattttattagtaatatatactagatacatcaattatac 579661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 238
Target Start/End: Complemental strand, 13279030 - 13278985
Alignment:
Q  193 cctccggtccttgttacaagaaaaagttgactttttagattcattg 238  Q
    |||||||||||| ||| |||||| ||||||||||||||||| ||||    
T  13279030 cctccggtccttattataagaaacagttgactttttagatttattg 13278985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 254
Target Start/End: Original strand, 25027698 - 25027759
Alignment:
Q  193 cctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtattt 254  Q
    |||||||||||  |||||||| | | || ||||||||||| |||||||||||| ||||||||    
T  25027698 cctccggtcctatttacaagagacaatttactttttagatacattgaataatttatgtattt 25027759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 238
Target Start/End: Original strand, 32455138 - 32455188
Alignment:
Q  186 aataccccctccggtccttgttacaagaaaaagttgactttttagattcattg 238  Q
    ||||| ||||||||||||||||| |||||||  |||||||||| |||||||||    
T  32455138 aatactccctccggtccttgttataagaaaa--ttgacttttttgattcattg 32455188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 187 - 244
Target Start/End: Complemental strand, 41989714 - 41989657
Alignment:
Q  187 ataccccctccggtccttgttacaagaaaaagttgactttttagattcattgaataat 244  Q
    |||||| |||| |||||  ||| |||| |||||||||||||||||| |||||||||||    
T  41989714 ataccctctccagtcctatttaaaagagaaagttgactttttagatacattgaataat 41989657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 194 - 254
Target Start/End: Original strand, 1138223 - 1138283
Alignment:
Q  194 ctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtattt 254  Q
    ||||||||||  ||| |||||| | || ||||||| |||| ||||||||||||||||||||    
T  1138223 ctccggtcctatttataagaaacaatttacttttttgatttattgaataattaatgtattt 1138283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 192 - 240
Target Start/End: Original strand, 2959242 - 2959290
Alignment:
Q  192 ccctccggtccttgttacaagaaaaagttgactttttagattcattgaa 240  Q
    ||||||||||||  |||||||| ||| |||||||||||||| |||||||    
T  2959242 ccctccggtcctatttacaagagaaaattgactttttagatacattgaa 2959290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 192 - 240
Target Start/End: Original strand, 2967711 - 2967759
Alignment:
Q  192 ccctccggtccttgttacaagaaaaagttgactttttagattcattgaa 240  Q
    ||||||||||||  |||||||| ||| |||||||||||||| |||||||    
T  2967711 ccctccggtcctatttacaagagaaaattgactttttagatacattgaa 2967759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 192 - 252
Target Start/End: Original strand, 5240225 - 5240285
Alignment:
Q  192 ccctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtat 252  Q
    ||||||||||  | ||| ||| |||| |||| ||||||||| |||||||||||||||||||    
T  5240225 ccctccggtcactattataagcaaaatttgattttttagatacattgaataattaatgtat 5240285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 210 - 254
Target Start/End: Complemental strand, 6604449 - 6604405
Alignment:
Q  210 aagaaaaagttgactttttagattcattgaataattaatgtattt 254  Q
    |||||| | ||||||||||| |||||||||||||||||| |||||    
T  6604449 aagaaacaattgactttttaaattcattgaataattaatttattt 6604405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 186 - 254
Target Start/End: Original strand, 7945834 - 7945902
Alignment:
Q  186 aataccccctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtattt 254  Q
    ||||| ||||||||||||  |||||||||| | || ||||||||||| |||| ||||||| || |||||    
T  7945834 aatactccctccggtcctatttacaagaaacaatttactttttagatacattaaataatttatatattt 7945902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 210 - 254
Target Start/End: Complemental strand, 8235504 - 8235460
Alignment:
Q  210 aagaaaaagttgactttttagattcattgaataattaatgtattt 254  Q
    |||||||| |||| |||||||||| |||||||||||||| |||||    
T  8235504 aagaaaaaattgattttttagatttattgaataattaatatattt 8235460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 222 - 290
Target Start/End: Original strand, 13128226 - 13128294
Alignment:
Q  222 actttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcacttatacaa 290  Q
    ||||||||  || |||||||||||||| ||| |  || |||||||||||||||| ||||||||| ||||    
T  13128226 actttttatgtttattgaataattaatatatctcgttataaatatagactagatgcatcacttacacaa 13128294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 192 - 244
Target Start/End: Original strand, 21090379 - 21090431
Alignment:
Q  192 ccctccggtccttgttacaagaaaaagttgactttttagattcattgaataat 244  Q
    ||||||||||||  |||||||| ||| || ||||||||||| |||||||||||    
T  21090379 ccctccggtcctatttacaagagaaaattaactttttagatacattgaataat 21090431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 86; Significance: 4e-41; HSPs: 69)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 186 - 324
Target Start/End: Complemental strand, 15239843 - 15239705
Alignment:
Q  186 aataccccctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcactta 285  Q
    ||||| ||||||||||||| ||| ||||||||||||||||||||| ||||| ||||||||||| ||| ||||||||||||||||||||||||||||||||    
T  15239843 aatactccctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatatatcttattgtaaatatagactagatacatcactta 15239744  T
Q  286 tacaatgaaccnnnnnnntcaattgtttcttataataag 324  Q
     ||||||||||       |||||||||||||||||||||    
T  15239743 cacaatgaaccaacaaaatcaattgtttcttataataag 15239705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 186 - 296
Target Start/End: Complemental strand, 28143896 - 28143786
Alignment:
Q  186 aataccccctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcactta 285  Q
    ||||| ||||||||||||| ||| ||||||||||||||||||||| ||||| ||||||||||||||| ||||| ||||||||||||||||||||||||||    
T  28143896 aatactccctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgtatcttattataaatatagactagatacatcactta 28143797  T
Q  286 tacaatgaacc 296  Q
     ||||||||||    
T  28143796 cacaatgaacc 28143786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 186 - 324
Target Start/End: Original strand, 45076339 - 45076477
Alignment:
Q  186 aataccccctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcactta 285  Q
    ||||| ||||||||||||| ||| |||||||| |||| ||||||| ||||| |||||||||||||||||||||||| |||||||||||||||||||||||    
T  45076339 aatactccctccggtccttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactagatacatcactta 45076438  T
Q  286 tacaatgaaccnnnnnnntcaattgtttcttataataag 324  Q
     ||||||||||       |||||||||| ||||||||||    
T  45076439 cacaatgaaccaaaaaagtcaattgttttttataataag 45076477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 187 - 324
Target Start/End: Complemental strand, 40534663 - 40534526
Alignment:
Q  187 ataccccctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcacttat 286  Q
    |||| ||||||||||||| ||| |||| |||||||||||||||| ||||| |||||| |||||||| |||||||||||||||||||||||||||| ||||    
T  40534663 atactccctccggtccttattataagataaagttgactttttaggttcatagaataaataatgtatcttattgtaaatatagactagatacatcatttat 40534564  T
Q  287 acaatgaaccnnnnnnntcaattgtttcttataataag 324  Q
    |||||||||        |||||||||||||||||||||    
T  40534563 acaatgaactaaaaaaatcaattgtttcttataataag 40534526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 186 - 295
Target Start/End: Complemental strand, 36103544 - 36103435
Alignment:
Q  186 aataccccctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcactta 285  Q
    ||||| ||||||||||||| ||| ||||||||||||| ||||||| ||||| ||||||||||||||| ||||||||||||||| ||||||||||||||||    
T  36103544 aatactccctccggtccttattataagaaaaagttgattttttaggttcatagaataattaatgtatcttattgtaaatatagtctagatacatcactta 36103445  T
Q  286 tacaatgaac 295  Q
     |||||||||    
T  36103444 cacaatgaac 36103435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 187 - 324
Target Start/End: Complemental strand, 25795388 - 25795251
Alignment:
Q  187 ataccccctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcacttat 286  Q
    |||| ||||||||||||| |||||||||| | ||||||||||||||||||||||||||||||||||||  || |||||||||||||||||||| |||||     
T  25795388 atactccctccggtccttattacaagaaacaattgactttttagattcattgaataattaatgtatttcgttataaatatagactagatacattacttac 25795289  T
Q  287 acaatgaaccnnnnnnntcaattgtttcttataataag 324  Q
    || || ||||       |||||||||||||||||||||    
T  25795288 acgattaacctaaaaagtcaattgtttcttataataag 25795251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 196 - 296
Target Start/End: Complemental strand, 23464638 - 23464537
Alignment:
Q  196 ccggtccttgttacaagaaaaagttgact-ttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcacttatacaatgaa 294  Q
    ||||||||| ||| ||||||||||||| | |||||| ||||| ||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||    
T  23464638 ccggtccttattataagaaaaagttgattattttaggttcatagaataattaatgtatcttattgtaaatatagactagatacatctcttatacaatgaa 23464539  T
Q  295 cc 296  Q
    ||    
T  23464538 cc 23464537  T

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Target: chr2; HSP #8
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 210 - 323
Target Start/End: Original strand, 27306732 - 27306843
Alignment:
Q  210 aagaaaaagttgactttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcacttatacaatgaaccnnnnnnntcaatt 309  Q
    ||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||   ||||| ||||| ||||       ||||||    
T  27306732 aagaaaaagttgactttttaggttcattgaataattaatgtatcttattgtaaatatagactagatac--gacttacacaataaaccaaaaaaatcaatt 27306829  T
Q  310 gtttcttataataa 323  Q
    ||||||||||||||    
T  27306830 gtttcttataataa 27306843  T

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Target: chr2; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 192 - 324
Target Start/End: Complemental strand, 27311722 - 27311590
Alignment:
Q  192 ccctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcacttatacaat 291  Q
    ||||||||||||| | |||||||| | |||| |||||||||| ||||||||||||| |||| || || ||||||||||||||||| |||| || ||||||    
T  27311722 ccctccggtccttatcacaagaaacaattgattttttagatttattgaataattaacgtatcttgttataaatatagactagatatatcatttgtacaat 27311623  T
Q  292 gaaccnnnnnnntcaattgtttcttataataag 324  Q
    |||||       |||||||||||||||||||||    
T  27311622 gaacctaaaaagtcaattgtttcttataataag 27311590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 200 - 296
Target Start/End: Complemental strand, 3365412 - 3365316
Alignment:
Q  200 tccttgttacaagaaaaagttgactttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcacttatacaatgaacc 296  Q
    ||||| ||| |||||| | |||| ||||| ||||||||||||||||||| ||| || || |||||||||| ||||||||||||||||||||||||||    
T  3365412 tccttattataagaaataattgatttttttgattcattgaataattaatatatcttgttataaatatagattagatacatcacttatacaatgaacc 3365316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 198 - 324
Target Start/End: Original strand, 6971579 - 6971705
Alignment:
Q  198 ggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcacttatacaatgaaccn 297  Q
    ||||||| ||| |||||| | ||||||||||| ||| |||| ||||||||||||| || || |||||||||| ||||||||||| ||| ||||||||||     
T  6971579 ggtccttattataagaaacaattgactttttaaatttattgtataattaatgtatattgttataaatatagattagatacatcatttacacaatgaacct 6971678  T
Q  298 nnnnnntcaattgtttcttataataag 324  Q
          |||| ||||||||||||||||    
T  6971679 aaaaagtcaaatgtttcttataataag 6971705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 210 - 285
Target Start/End: Complemental strand, 9373521 - 9373446
Alignment:
Q  210 aagaaaaagttgactttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcactta 285  Q
    |||||| | ||||||||||| ||||||||||||||||| |||| || |||||||||||||||| ||||||||||||    
T  9373521 aagaaacaattgactttttaaattcattgaataattaacgtatcttgttgtaaatatagactacatacatcactta 9373446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 187 - 294
Target Start/End: Original strand, 12873721 - 12873828
Alignment:
Q  187 ataccccctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcacttat 286  Q
    |||| ||||||| ||||| ||| |||||||||||||||||||||||||||| | ||||||||||||||  |    ||||||||||| |||||||| ||||    
T  12873721 atactccctccgatcctttttataagaaaaagttgactttttagattcattaagtaattaatgtatttggtatagaatatagactaaatacatcatttat 12873820  T
Q  287 acaatgaa 294  Q
     |||||||    
T  12873821 gcaatgaa 12873828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 219 - 296
Target Start/End: Original strand, 41464744 - 41464821
Alignment:
Q  219 ttgactttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcacttatacaatgaacc 296  Q
    |||| ||||||  ||||||||||||||||||||| |  || |||||||||||||||||||||||||| ||||||||||    
T  41464744 ttgattttttaagttcattgaataattaatgtatctcgttataaatatagactagatacatcacttacacaatgaacc 41464821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 187 - 294
Target Start/End: Complemental strand, 41153261 - 41153154
Alignment:
Q  187 ataccccctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcacttat 286  Q
    |||| ||||||| ||||  ||| |||||||||||||||||||||||||||||| ||||| ||||||||  ||   ||||||||| | |||||||| ||||    
T  41153261 atactccctccgatcctatttataagaaaaagttgactttttagattcattgagtaattgatgtatttggtttataatatagaccaaatacatcatttat 41153162  T
Q  287 acaatgaa 294  Q
     |||||||    
T  41153161 gcaatgaa 41153154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 210 - 291
Target Start/End: Complemental strand, 11687602 - 11687521
Alignment:
Q  210 aagaaaaagttgactttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcacttatacaat 291  Q
    |||||| | ||||||||||||||| |||||||||||||| ||  |  || |||||||||||||||||||||||||| |||||    
T  11687602 aagaaacaattgactttttagatttattgaataattaatataactcgttataaatatagactagatacatcacttacacaat 11687521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 194 - 254
Target Start/End: Original strand, 5109368 - 5109428
Alignment:
Q  194 ctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtattt 254  Q
    ||||||||||  ||| ||||||||||| |||||||||||||||||| ||||||||||||||    
T  5109368 ctccggtcctatttataagaaaaagttaactttttagattcattgagtaattaatgtattt 5109428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 210 - 294
Target Start/End: Original strand, 12962726 - 12962810
Alignment:
Q  210 aagaaaaagttgactttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcacttatacaatgaa 294  Q
    |||||||||||||||||||||||||||||| ||||||||||| ||  |   |||||||||| | |||||||| |||| |||||||    
T  12962726 aagaaaaagttgactttttagattcattgagtaattaatgtacttggtataaaatatagaccaaatacatcatttatgcaatgaa 12962810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 210 - 254
Target Start/End: Complemental strand, 28249060 - 28249016
Alignment:
Q  210 aagaaaaagttgactttttagattcattgaataattaatgtattt 254  Q
    |||||||||||||||||||||||||||| ||||||||||||||||    
T  28249060 aagaaaaagttgactttttagattcattaaataattaatgtattt 28249016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 187 - 254
Target Start/End: Complemental strand, 12486142 - 12486075
Alignment:
Q  187 ataccccctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtattt 254  Q
    |||| ||||| ||||||  |||||||||| | ||||||||||||||||||||||||||| ||||||||    
T  12486142 atactccctctggtcctatttacaagaaacaattgactttttagattcattgaataattgatgtattt 12486075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 186 - 244
Target Start/End: Original strand, 7765791 - 7765849
Alignment:
Q  186 aataccccctccggtccttgttacaagaaaaagttgactttttagattcattgaataat 244  Q
    ||||| ||||||||||||  |||||||| |||||||||||||||||| |||||||||||    
T  7765791 aatactccctccggtcctatttacaagagaaagttgactttttagatacattgaataat 7765849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 186 - 244
Target Start/End: Original strand, 32750339 - 32750397
Alignment:
Q  186 aataccccctccggtccttgttacaagaaaaagttgactttttagattcattgaataat 244  Q
    ||||| ||||||||||||  |||||||| |||||||||||||||||| |||||||||||    
T  32750339 aatactccctccggtcctatttacaagagaaagttgactttttagatacattgaataat 32750397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 213 - 291
Target Start/End: Complemental strand, 4410901 - 4410823
Alignment:
Q  213 aaaaagttgactttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcacttatacaat 291  Q
    ||||||||||||||||||||||||||  |||||||||||| || ||  |||||||||  | |||||||| |||| ||||    
T  4410901 aaaaagttgactttttagattcattgtgtaattaatgtatcttgtttaaaatatagatcaaatacatcatttatgcaat 4410823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 186 - 244
Target Start/End: Complemental strand, 29866233 - 29866175
Alignment:
Q  186 aataccccctccggtccttgttacaagaaaaagttgactttttagattcattgaataat 244  Q
    ||||| ||||||||||||  |||||||| |||||||||||||||| | |||||||||||    
T  29866233 aatactccctccggtcctatttacaagataaagttgactttttaggtacattgaataat 29866175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 189 - 251
Target Start/End: Complemental strand, 38554606 - 38554544
Alignment:
Q  189 accccctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgta 251  Q
    |||| ||||||||||  ||| ||||||||||| |||||||| ||||||||| |||||||||||    
T  38554606 accctctccggtcctatttataagaaaaagttaactttttaaattcattgagtaattaatgta 38554544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 193 - 251
Target Start/End: Original strand, 45034402 - 45034460
Alignment:
Q  193 cctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgta 251  Q
    |||||||||||  ||| ||||||||||| |||||||||||||||| ||||||| |||||    
T  45034402 cctccggtcctatttataagaaaaagttaactttttagattcattcaataattgatgta 45034460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 187 - 244
Target Start/End: Complemental strand, 6761615 - 6761558
Alignment:
Q  187 ataccccctccggtccttgttacaagaaaaagttgactttttagattcattgaataat 244  Q
    |||| ||||||||||||  |||||||| | |||||||||||||||| |||||||||||    
T  6761615 atactccctccggtcctatttacaagagacagttgactttttagatacattgaataat 6761558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 196 - 269
Target Start/End: Original strand, 6971503 - 6971576
Alignment:
Q  196 ccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtattttattgtaaatataga 269  Q
    ||||||||| ||| |||||| | ||||||||||| ||| |||| ||||||||||||| || || ||||||||||    
T  6971503 ccggtccttattataagaaacaattgactttttaaatttattgtataattaatgtatattgttataaatataga 6971576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 192 - 252
Target Start/End: Complemental strand, 7943585 - 7943524
Alignment:
Q  192 ccctccggtccttgttacaagaaaaag-ttgactttttagattcattgaataattaatgtat 252  Q
    ||||||||||||  ||| ||||||||  ||||||||||||||||||||||||||| ||||||    
T  7943585 ccctccggtcctatttataagaaaaaaattgactttttagattcattgaataattgatgtat 7943524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 187 - 252
Target Start/End: Complemental strand, 9152529 - 9152464
Alignment:
Q  187 ataccccctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtat 252  Q
    |||| |||||||||| |  |||||||||| | ||||||||||||||||||||| ||||| ||||||    
T  9152529 atactccctccggtcttatttacaagaaacaattgactttttagattcattgagtaattgatgtat 9152464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 187 - 248
Target Start/End: Complemental strand, 22333675 - 22333614
Alignment:
Q  187 ataccccctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaat 248  Q
    |||| ||||| |||||| ||||  ||||||| ||||||||||||||||||||| ||||||||    
T  22333675 atactccctctggtcctagttattagaaaaaattgactttttagattcattgagtaattaat 22333614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 210 - 295
Target Start/End: Complemental strand, 38449065 - 38448980
Alignment:
Q  210 aagaaaaagttgactttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcacttatacaatgaac 295  Q
    |||||| | |||||||||||| |||||| ||||||| ||| || || |  ||||||||||  |||||||||||||| |||||||||    
T  38449065 aagaaacaattgactttttaggttcattaaataattgatgcatcttgtgataaatatagatcagatacatcacttacacaatgaac 38448980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 186 - 254
Target Start/End: Original strand, 9152376 - 9152444
Alignment:
Q  186 aataccccctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtattt 254  Q
    ||||| ||||||||||||  |||||||||| | |||||||||| || ||||| ||||||| ||||||||    
T  9152376 aatactccctccggtcctatttacaagaaacatttgacttttttgagtcattaaataattgatgtattt 9152444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 222 - 294
Target Start/End: Original strand, 10204959 - 10205031
Alignment:
Q  222 actttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcacttatacaatgaa 294  Q
    ||||||||||||||||||  |||| |||||| || |   |||||||||||| |||||||| ||||||||||||    
T  10204959 actttttagattcattgagcaattgatgtatcttgtctaaaatatagactaaatacatcatttatacaatgaa 10205031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 192 - 244
Target Start/End: Original strand, 16241270 - 16241322
Alignment:
Q  192 ccctccggtccttgttacaagaaaaagttgactttttagattcattgaataat 244  Q
    ||||||||||||  |||||||| | |||||||||||||||| |||||||||||    
T  16241270 ccctccggtcctatttacaagagacagttgactttttagatacattgaataat 16241322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 210 - 294
Target Start/End: Complemental strand, 32457340 - 32457256
Alignment:
Q  210 aagaaaaagttgactttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcacttatacaatgaa 294  Q
    |||||||| ||||||||||||||||||| | ||||| |||||| || |    ||||||||||| |||||||| |||| |||||||    
T  32457340 aagaaaaatttgactttttagattcattaagtaattgatgtatcttgtctagaatatagactaaatacatcatttatgcaatgaa 32457256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 192 - 252
Target Start/End: Original strand, 36881536 - 36881596
Alignment:
Q  192 ccctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtat 252  Q
    ||||||||| ||  ||| |||||||| |||||||||||||| |||||| ||||||||||||    
T  36881536 ccctccggttctatttataagaaaaatttgactttttagatacattgagtaattaatgtat 36881596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 193 - 244
Target Start/End: Complemental strand, 32197520 - 32197469
Alignment:
Q  193 cctccggtccttgttacaagaaaaagttgactttttagattcattgaataat 244  Q
    |||||||||||  |||||||| |||||||| ||||||||| |||||||||||    
T  32197520 cctccggtcctatttacaagagaaagttgattttttagatacattgaataat 32197469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 187 - 254
Target Start/End: Original strand, 42263468 - 42263535
Alignment:
Q  187 ataccccctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtattt 254  Q
    |||| ||||||||||||  ||| |||| |||||||| ||||||||| |||||||||||  ||||||||    
T  42263468 atactccctccggtcctatttataagagaaagttgattttttagatacattgaataatgtatgtattt 42263535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 200 - 247
Target Start/End: Complemental strand, 44283670 - 44283623
Alignment:
Q  200 tccttgttacaagaaaaagttgactttttagattcattgaataattaa 247  Q
    ||||| ||| |||||| | |||||||||||||||||||||||||||||    
T  44283670 tccttattataagaaataattgactttttagattcattgaataattaa 44283623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 206 - 244
Target Start/End: Original strand, 11363015 - 11363053
Alignment:
Q  206 ttacaagaaaaagttgactttttagattcattgaataat 244  Q
    |||||||| |||||||||||||||||| |||||||||||    
T  11363015 ttacaagagaaagttgactttttagatgcattgaataat 11363053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 186 - 244
Target Start/End: Complemental strand, 13775862 - 13775804
Alignment:
Q  186 aataccccctccggtccttgttacaagaaaaagttgactttttagattcattgaataat 244  Q
    ||||| ||||||||||||  ||| |||| |||||||||||||||||| |||| ||||||    
T  13775862 aatactccctccggtcctatttataagagaaagttgactttttagatacattaaataat 13775804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 206 - 244
Target Start/End: Original strand, 43657942 - 43657980
Alignment:
Q  206 ttacaagaaaaagttgactttttagattcattgaataat 244  Q
    |||||||| |||||||||||||||||| |||||||||||    
T  43657942 ttacaagagaaagttgactttttagatacattgaataat 43657980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 186 - 244
Target Start/End: Original strand, 44737280 - 44737338
Alignment:
Q  186 aataccccctccggtccttgttacaagaaaaagttgactttttagattcattgaataat 244  Q
    ||||| |||||||||| |  |||||||| ||| |||||||||||||| |||||||||||    
T  44737280 aatactccctccggtcttatttacaagagaaaattgactttttagatacattgaataat 44737338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 251
Target Start/End: Original strand, 45571034 - 45571092
Alignment:
Q  193 cctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgta 251  Q
    |||||||||||  ||| |||||||| || |||||||||||||||| ||||||| |||||    
T  45571034 cctccggtcctatttataagaaaaaattaactttttagattcattcaataattgatgta 45571092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 251
Target Start/End: Original strand, 45574701 - 45574759
Alignment:
Q  193 cctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgta 251  Q
    |||||||||||  ||| |||||||| || |||||||||||||||| ||||||| |||||    
T  45574701 cctccggtcctatttataagaaaaaattaactttttagattcattcaataattgatgta 45574759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 251
Target Start/End: Original strand, 45578368 - 45578426
Alignment:
Q  193 cctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgta 251  Q
    |||||||||||  ||| |||||||| || |||||||||||||||| ||||||| |||||    
T  45578368 cctccggtcctatttataagaaaaaattaactttttagattcattcaataattgatgta 45578426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 251
Target Start/End: Original strand, 45582035 - 45582093
Alignment:
Q  193 cctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgta 251  Q
    |||||||||||  ||| |||||||| || |||||||||||||||| ||||||| |||||    
T  45582035 cctccggtcctatttataagaaaaaattaactttttagattcattcaataattgatgta 45582093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 251
Target Start/End: Original strand, 45585702 - 45585760
Alignment:
Q  193 cctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgta 251  Q
    |||||||||||  ||| |||||||| || |||||||||||||||| ||||||| |||||    
T  45585702 cctccggtcctatttataagaaaaaattaactttttagattcattcaataattgatgta 45585760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 251
Target Start/End: Original strand, 45589369 - 45589427
Alignment:
Q  193 cctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgta 251  Q
    |||||||||||  ||| |||||||| || |||||||||||||||| ||||||| |||||    
T  45589369 cctccggtcctatttataagaaaaaattaactttttagattcattcaataattgatgta 45589427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 251
Target Start/End: Original strand, 45593036 - 45593094
Alignment:
Q  193 cctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgta 251  Q
    |||||||||||  ||| |||||||| || |||||||||||||||| ||||||| |||||    
T  45593036 cctccggtcctatttataagaaaaaattaactttttagattcattcaataattgatgta 45593094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 251
Target Start/End: Original strand, 45596703 - 45596761
Alignment:
Q  193 cctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgta 251  Q
    |||||||||||  ||| |||||||| || |||||||||||||||| ||||||| |||||    
T  45596703 cctccggtcctatttataagaaaaaattaactttttagattcattcaataattgatgta 45596761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 251
Target Start/End: Original strand, 45600370 - 45600428
Alignment:
Q  193 cctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgta 251  Q
    |||||||||||  ||| |||||||| || |||||||||||||||| ||||||| |||||    
T  45600370 cctccggtcctatttataagaaaaaattaactttttagattcattcaataattgatgta 45600428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 251
Target Start/End: Original strand, 45604037 - 45604095
Alignment:
Q  193 cctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgta 251  Q
    |||||||||||  ||| |||||||| || |||||||||||||||| ||||||| |||||    
T  45604037 cctccggtcctatttataagaaaaaattaactttttagattcattcaataattgatgta 45604095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 251
Target Start/End: Original strand, 45607704 - 45607762
Alignment:
Q  193 cctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgta 251  Q
    |||||||||||  ||| |||||||| || |||||||||||||||| ||||||| |||||    
T  45607704 cctccggtcctatttataagaaaaaattaactttttagattcattcaataattgatgta 45607762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 251
Target Start/End: Original strand, 45611371 - 45611429
Alignment:
Q  193 cctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgta 251  Q
    |||||||||||  ||| |||||||| || |||||||||||||||| ||||||| |||||    
T  45611371 cctccggtcctatttataagaaaaaattaactttttagattcattcaataattgatgta 45611429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 251
Target Start/End: Original strand, 45615038 - 45615096
Alignment:
Q  193 cctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgta 251  Q
    |||||||||||  ||| |||||||| || |||||||||||||||| ||||||| |||||    
T  45615038 cctccggtcctatttataagaaaaaattaactttttagattcattcaataattgatgta 45615096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 210 - 251
Target Start/End: Original strand, 5559384 - 5559425
Alignment:
Q  210 aagaaaaagttgactttttagattcattgaataattaatgta 251  Q
    |||||||| ||||||||||||||||||||| ||||| |||||    
T  5559384 aagaaaaatttgactttttagattcattgagtaattgatgta 5559425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 254
Target Start/End: Original strand, 6761469 - 6761530
Alignment:
Q  193 cctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtattt 254  Q
    |||||||||||  |||||||| | | || ||||||||||| |||||||||||| ||||||||    
T  6761469 cctccggtcctatttacaagagacaatttactttttagatacattgaataatttatgtattt 6761530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 210 - 251
Target Start/End: Original strand, 11794470 - 11794511
Alignment:
Q  210 aagaaaaagttgactttttagattcattgaataattaatgta 251  Q
    |||||||| |||| |||||||||| |||||||||||||||||    
T  11794470 aagaaaaaattgattttttagatttattgaataattaatgta 11794511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 254
Target Start/End: Complemental strand, 16241411 - 16241350
Alignment:
Q  193 cctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtattt 254  Q
    |||||||||||  |||||||| | | || ||||||||||| |||||||||||| ||||||||    
T  16241411 cctccggtcctatttacaagagacaatttactttttagatacattgaataatttatgtattt 16241350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 207 - 252
Target Start/End: Original strand, 22857822 - 22857867
Alignment:
Q  207 tacaagaaaaagttgactttttagattcattgaataattaatgtat 252  Q
    ||||||||| | |||||||||||||| |||||||||||| ||||||    
T  22857822 tacaagaaacaattgactttttagatacattgaataatttatgtat 22857867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 254
Target Start/End: Complemental strand, 25892088 - 25892027
Alignment:
Q  193 cctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtattt 254  Q
    |||||||||||  |||||||| | | || ||||||||||| |||||||||||| ||||||||    
T  25892088 cctccggtcctatttacaagagacaatttactttttagatacattgaataatttatgtattt 25892027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 210 - 255
Target Start/End: Original strand, 39445016 - 39445061
Alignment:
Q  210 aagaaaaagttgactttttagattcattgaataattaatgtatttt 255  Q
    |||||||| ||||||||| ||||||||||| ||||| |||||||||    
T  39445016 aagaaaaatttgacttttaagattcattgagtaattgatgtatttt 39445061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 254
Target Start/End: Complemental strand, 44737426 - 44737365
Alignment:
Q  193 cctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtattt 254  Q
    |||||||||||  |||||||| | | || ||||||||||| |||||||||||| ||||||||    
T  44737426 cctccggtcctatttacaagagacaatttactttttagatacattgaataatttatgtattt 44737365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 224 - 252
Target Start/End: Complemental strand, 9114029 - 9114001
Alignment:
Q  224 tttttagattcattgaataattaatgtat 252  Q
    |||||||||||||||||||||||||||||    
T  9114029 tttttagattcattgaataattaatgtat 9114001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 192 - 244
Target Start/End: Complemental strand, 20360589 - 20360537
Alignment:
Q  192 ccctccggtccttgttacaagaaaaagttgactttttagattcattgaataat 244  Q
    ||||||||| ||  ||| |||| |||||||||||||||||| |||||||||||    
T  20360589 ccctccggttctatttataagagaaagttgactttttagatacattgaataat 20360537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 192 - 252
Target Start/End: Complemental strand, 34447648 - 34447588
Alignment:
Q  192 ccctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtat 252  Q
    ||||| ||||||  ||| ||||||||||||| |||||||||||||||  |||| |||||||    
T  34447648 ccctctggtcctatttataagaaaaagttgattttttagattcattgtgtaatcaatgtat 34447588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 186 - 254
Target Start/End: Complemental strand, 42263621 - 42263553
Alignment:
Q  186 aataccccctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtattt 254  Q
    ||||| |||||| |||||  |||||||||| | || ||||||||||| |||| ||||||| ||||||||    
T  42263621 aatactccctccagtcctatttacaagaaacaatttactttttagatacattaaataatttatgtattt 42263553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 83; Significance: 3e-39; HSPs: 36)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 186 - 296
Target Start/End: Original strand, 30438740 - 30438850
Alignment:
Q  186 aataccccctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcactta 285  Q
    ||||| |||| || ||||| ||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  30438740 aatactcccttcgatccttattataagaaaaagttgactttttagattcatagaataattaatgtattttattgtaaatatagactagatacatcactta 30438839  T
Q  286 tacaatgaacc 296  Q
    |||||| ||||    
T  30438840 tacaataaacc 30438850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 186 - 296
Target Start/End: Complemental strand, 12217643 - 12217532
Alignment:
Q  186 aataccccctccggtccttgttacaagaaaaag-ttgactttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcactt 284  Q
    ||||||| ||||||||||| ||| ||||||||  |||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||    
T  12217643 aataccctctccggtccttattataagaaaaaaattgactttttagattcatagaataattaatgtatcttattgtaaatatagactagatacatcactt 12217544  T
Q  285 atacaatgaacc 296  Q
    ||||||| ||||    
T  12217543 atacaataaacc 12217532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 186 - 324
Target Start/End: Complemental strand, 28605721 - 28605583
Alignment:
Q  186 aataccccctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcactta 285  Q
    ||||| || |||||||||| ||| ||||||||| |||| |||||||||||| ||||||||||||||| |||||||||||||||  || ||||||||||||    
T  28605721 aatactccatccggtccttattataagaaaaagctgaccttttagattcatagaataattaatgtatcttattgtaaatatagtttaaatacatcactta 28605622  T
Q  286 tacaatgaaccnnnnnnntcaattgtttcttataataag 324  Q
     ||||||||||       | |||||||||||||||||||    
T  28605621 cacaatgaaccaaaaaagttaattgtttcttataataag 28605583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 192 - 285
Target Start/End: Complemental strand, 12605755 - 12605662
Alignment:
Q  192 ccctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcactta 285  Q
    |||||||||| || ||| |||||||||||||| |||||| ||||| ||||||||||||||| ||||||||||||||||||| ||||||||||||    
T  12605755 ccctccggtctttattataagaaaaagttgacattttaggttcatggaataattaatgtatcttattgtaaatatagactaaatacatcactta 12605662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 187 - 324
Target Start/End: Original strand, 2913331 - 2913468
Alignment:
Q  187 ataccccctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcacttat 286  Q
    |||| ||||||||||||| ||| ||| || | ||||||||||||||||||||||||||||||||   |  || |||||||||||||||||||| ||||||    
T  2913331 atactccctccggtccttattataagcaacatttgactttttagattcattgaataattaatgttcgtcgttataaatatagactagatacattacttat 2913430  T
Q  287 acaatgaaccnnnnnnntcaattgtttcttataataag 324  Q
    ||||||||||       ||||||||| |||||||||||    
T  2913431 acaatgaacctaaaaagtcaattgttgcttataataag 2913468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 192 - 287
Target Start/End: Complemental strand, 10145360 - 10145265
Alignment:
Q  192 ccctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcacttata 287  Q
    |||| ||||| || ||| || ||||| |||||||||||| |||||  |||||||||||||| ||||||||||||||||||||||||||||||||||    
T  10145360 cccttcggtctttattataaaaaaaaattgactttttaggttcataaaataattaatgtatcttattgtaaatatagactagatacatcacttata 10145265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 210 - 279
Target Start/End: Original strand, 9343141 - 9343210
Alignment:
Q  210 aagaaaaagttgactttttagattcattgaataattaatgtattttattgtaaatatagactagatacat 279  Q
    |||||| | |||||||||||||||||| ||||||||||||||| || || ||||||||||||||||||||    
T  9343141 aagaaataattgactttttagattcatagaataattaatgtatcttgttataaatatagactagatacat 9343210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 199 - 295
Target Start/End: Complemental strand, 359683 - 359587
Alignment:
Q  199 gtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcacttatacaatgaac 295  Q
    |||||| ||| |||||| | |||||||||||| |||| ||||||| |||||||| |  || |||||||||| ||||||||||||||| |||||||||    
T  359683 gtccttattataagaaacaattgactttttaggttcaatgaataactaatgtatctcgttataaatatagattagatacatcacttacacaatgaac 359587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 200 - 284
Target Start/End: Complemental strand, 3847545 - 3847461
Alignment:
Q  200 tccttgttacaagaaaaagttgactttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcactt 284  Q
    ||||||||| ||||||||  ||||||||||| |||||  |||||||||| ||||||||| |||||||||||||||| ||| ||||    
T  3847545 tccttgttataagaaaaaagtgactttttaggttcatataataattaatatattttattataaatatagactagatgcattactt 3847461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 232 - 295
Target Start/End: Original strand, 8265015 - 8265078
Alignment:
Q  232 ttcattgaataattaatgtattttattgtaaatatagactagatacatcacttatacaatgaac 295  Q
    ||||| ||||||||||||||| || || |||||||||||||||||||||||||| |||||||||    
T  8265015 ttcatagaataattaatgtatcttgttataaatatagactagatacatcacttacacaatgaac 8265078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 210 - 281
Target Start/End: Complemental strand, 33127913 - 33127842
Alignment:
Q  210 aagaaaaagttgactttttagattcattgaataattaatgtattttattgtaaatatagactagatacatca 281  Q
    |||||| | ||||||||||||||| |||||||||||||||||| || ||  |||||||||||||||||||||    
T  33127913 aagaaacaattgactttttagatttattgaataattaatgtatcttgttacaaatatagactagatacatca 33127842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 226 - 296
Target Start/End: Complemental strand, 29284609 - 29284539
Alignment:
Q  226 tttagattcattgaataattaatgtattttattgtaaatatagactagatacatcacttatacaatgaacc 296  Q
    ||||| |||||||||||||||||| || |  || |||||||||||||||||||||||||| | ||||||||    
T  29284609 tttagtttcattgaataattaatgcatctcgttataaatatagactagatacatcacttacataatgaacc 29284539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 187 - 252
Target Start/End: Complemental strand, 2230499 - 2230434
Alignment:
Q  187 ataccccctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtat 252  Q
    |||| ||||||||||||  ||| |||||||  ||||||||||||||||||||| ||||||||||||    
T  2230499 atactccctccggtcctatttataagaaaactttgactttttagattcattgagtaattaatgtat 2230434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 222 - 294
Target Start/End: Original strand, 12450384 - 12450456
Alignment:
Q  222 actttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcacttatacaatgaa 294  Q
    ||||||| |||||||||||||||| |||||||||||   ||||||||| || |||||||| |||| |||||||    
T  12450384 actttttggattcattgaataattgatgtattttatctaaaatatagattaaatacatcatttatgcaatgaa 12450456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 193 - 251
Target Start/End: Original strand, 17598115 - 17598173
Alignment:
Q  193 cctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgta 251  Q
    |||||||||||| ||| |||||||| ||||||||||| ||| || ||||||||||||||    
T  17598115 cctccggtccttcttataagaaaaaattgactttttaaatttatagaataattaatgta 17598173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 186 - 244
Target Start/End: Original strand, 24949628 - 24949686
Alignment:
Q  186 aataccccctccggtccttgttacaagaaaaagttgactttttagattcattgaataat 244  Q
    ||||| ||||||||||||  |||||||| ||| |||||||||||||| |||||||||||    
T  24949628 aatactccctccggtcctatttacaagagaaaattgactttttagatacattgaataat 24949686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 186 - 244
Target Start/End: Original strand, 31971027 - 31971085
Alignment:
Q  186 aataccccctccggtccttgttacaagaaaaagttgactttttagattcattgaataat 244  Q
    ||||| |||||||||| |  |||||||| |||||||||||||||||| |||||||||||    
T  31971027 aatactccctccggtcttatttacaagagaaagttgactttttagatacattgaataat 31971085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 187 - 244
Target Start/End: Original strand, 885600 - 885657
Alignment:
Q  187 ataccccctccggtccttgttacaagaaaaagttgactttttagattcattgaataat 244  Q
    |||| ||||||||||||  |||||||| | |||||||||||||||| |||||||||||    
T  885600 atactccctccggtcctatttacaagagacagttgactttttagatacattgaataat 885657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 209 - 254
Target Start/End: Complemental strand, 5483989 - 5483944
Alignment:
Q  209 caagaaaaagttgactttttagattcattgaataattaatgtattt 254  Q
    ||||||| | |||||||||||||||| |||||||||||||||||||    
T  5483989 caagaaacaattgactttttagattcgttgaataattaatgtattt 5483944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 222 - 253
Target Start/End: Original strand, 1158278 - 1158309
Alignment:
Q  222 actttttagattcattgaataattaatgtatt 253  Q
    ||||||||||||||||||||||||||||||||    
T  1158278 actttttagattcattgaataattaatgtatt 1158309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 219 - 254
Target Start/End: Complemental strand, 7257448 - 7257413
Alignment:
Q  219 ttgactttttagattcattgaataattaatgtattt 254  Q
    ||||||||||| ||||||||||||||||||||||||    
T  7257448 ttgactttttaaattcattgaataattaatgtattt 7257413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 224 - 295
Target Start/End: Original strand, 33128860 - 33128931
Alignment:
Q  224 tttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcacttatacaatgaac 295  Q
    |||||||||||||| |||||||||||||| | ||| |||| ||| |||| |||||| | ||||| |||||||    
T  33128860 tttttagattcatttaataattaatgtatctcattataaagataaactatatacataatttataaaatgaac 33128931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 186 - 252
Target Start/End: Complemental strand, 2913484 - 2913418
Alignment:
Q  186 aataccccctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtat 252  Q
    ||||| ||||||||||||| ||| ||| || | |||||||||||| ||||||| |||| ||||||||    
T  2913484 aatactccctccggtccttattataagcaacaattgactttttaggttcattgtataagtaatgtat 2913418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 186 - 244
Target Start/End: Complemental strand, 7405595 - 7405537
Alignment:
Q  186 aataccccctccggtccttgttacaagaaaaagttgactttttagattcattgaataat 244  Q
    ||||| |||||||||| |  |||||||| ||| |||||||||||||| |||||||||||    
T  7405595 aatactccctccggtcttatttacaagagaaaattgactttttagatacattgaataat 7405537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 206 - 252
Target Start/End: Original strand, 8030172 - 8030218
Alignment:
Q  206 ttacaagaaaaagttgactttttagattcattgaataattaatgtat 252  Q
    |||||||||| | ||||||||||| |||||||||| |||||||||||    
T  8030172 ttacaagaaatatttgactttttaaattcattgaacaattaatgtat 8030218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 192 - 238
Target Start/End: Complemental strand, 23916272 - 23916226
Alignment:
Q  192 ccctccggtccttgttacaagaaaaagttgactttttagattcattg 238  Q
    ||||||||||||| ||| |||||| | ||||||||||||||||||||    
T  23916272 ccctccggtccttattataagaaacaattgactttttagattcattg 23916226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 224 - 290
Target Start/End: Complemental strand, 26484397 - 26484331
Alignment:
Q  224 tttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcacttatacaa 290  Q
    |||||||||| || |||||||||||| || || || ||||||||||||| |||||||| ||| ||||    
T  26484397 tttttagatttatggaataattaatgcatcttgttataaatatagactacatacatcatttacacaa 26484331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 192 - 254
Target Start/End: Complemental strand, 27909120 - 27909058
Alignment:
Q  192 ccctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtattt 254  Q
    ||||| ||||||  |||||||||| | ||||||||||  ||||||||||||||| ||||||||    
T  27909120 ccctctggtcctatttacaagaaacatttgacttttttaattcattgaataattgatgtattt 27909058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 294
Target Start/End: Complemental strand, 33120046 - 33119947
Alignment:
Q  193 cctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcacttatacaatg 292  Q
    |||||||| ||  ||| |||||||  ||||||||||||||||||||||||||  |||||| || |   |||||||||| | ||||| || ||||||||||    
T  33120046 cctccggttctatttataagaaaattttgactttttagattcattgaataatcgatgtatcttgt--caaatatagaccaaatacaacatttatacaatg 33119949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 186 - 244
Target Start/End: Complemental strand, 33859641 - 33859583
Alignment:
Q  186 aataccccctccggtccttgttacaagaaaaagttgactttttagattcattgaataat 244  Q
    ||||| ||||||||||||  |||||||| |||||| ||||||||||| ||| |||||||    
T  33859641 aatactccctccggtcctatttacaagagaaagttaactttttagatacatcgaataat 33859583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 187 - 244
Target Start/End: Original strand, 6047794 - 6047851
Alignment:
Q  187 ataccccctccggtccttgttacaagaaaaagttgactttttagattcattgaataat 244  Q
    |||| ||||||||||||  |||||| | |||||| ||||||||||| |||||||||||    
T  6047794 atactccctccggtcctatttacaacagaaagttaactttttagatacattgaataat 6047851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 187 - 244
Target Start/End: Original strand, 8558912 - 8558969
Alignment:
Q  187 ataccccctccggtccttgttacaagaaaaagttgactttttagattcattgaataat 244  Q
    |||| |||||| |||||  |||||||| ||| |||||||||||||| |||||||||||    
T  8558912 atactccctccagtcctatttacaagagaaaattgactttttagatacattgaataat 8558969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 206 - 254
Target Start/End: Complemental strand, 1158376 - 1158328
Alignment:
Q  206 ttacaagaaaaagttgactttttagattcattgaataattaatgtattt 254  Q
    |||||||||| | ||||||||||| || |||||||||||| ||||||||    
T  1158376 ttacaagaaataattgactttttaaatacattgaataattgatgtattt 1158328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 210 - 294
Target Start/End: Original strand, 2972185 - 2972269
Alignment:
Q  210 aagaaaaagttgactttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcacttatacaatgaa 294  Q
    |||| ||| ||||||||||||||| ||||| |||||  ||||| ||||   |||||||||| | |||||||| |||| |||||||    
T  2972185 aagagaaatttgactttttagatttattgagtaattggtgtatcttatctaaaatatagacaaaatacatcatttatgcaatgaa 2972269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 210 - 294
Target Start/End: Original strand, 3064904 - 3064988
Alignment:
Q  210 aagaaaaagttgactttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcacttatacaatgaa 294  Q
    |||||||| ||  |||||||||||||||| ||||||||||||| || |   |||||||||| | ||||| || |||| |||||||    
T  3064904 aagaaaaaattatctttttagattcattgtataattaatgtatcttgtataaaatatagaccaaatacaccatttatgcaatgaa 3064988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 192 - 244
Target Start/End: Original strand, 17225246 - 17225298
Alignment:
Q  192 ccctccggtccttgttacaagaaaaagttgactttttagattcattgaataat 244  Q
    |||||||||| |  |||||||  |||||||||||||||||| |||||||||||    
T  17225246 ccctccggtcttatttacaagtgaaagttgactttttagatacattgaataat 17225298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 70; Significance: 2e-31; HSPs: 63)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 186 - 324
Target Start/End: Original strand, 15699461 - 15699599
Alignment:
Q  186 aataccccctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcactta 285  Q
    ||||| ||||||||||||| ||| ||||||   |||| |||||||||||||||| |||||||||||| || |||||||||||||||||||||||||||||    
T  15699461 aatactccctccggtccttattataagaaacttttgattttttagattcattgagtaattaatgtatcttgttgtaaatatagactagatacatcactta 15699560  T
Q  286 tacaatgaaccnnnnnnntcaattgtttcttataataag 324  Q
    |||||| ||||       ||||||||||| |||||||||    
T  15699561 tacaataaacctaaaaattcaattgtttcatataataag 15699599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 192 - 296
Target Start/End: Complemental strand, 52279379 - 52279275
Alignment:
Q  192 ccctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcacttatacaat 291  Q
    ||||||| ||||| ||| |||||||||||||||||||||||||||  |||||||||| ||| |||||||||||||||||| ||||||||||||| |||||    
T  52279379 ccctccgatccttattataagaaaaagttgactttttagattcatataataattaatatatcttattgtaaatatagacttgatacatcacttacacaat 52279280  T
Q  292 gaacc 296  Q
    |||||    
T  52279279 gaacc 52279275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 186 - 324
Target Start/End: Original strand, 19998408 - 19998546
Alignment:
Q  186 aataccccctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcactta 285  Q
    ||||| ||||||||||||| ||| ||||||   ||||||||||| ||||||||| |||||||| ||| || |||||||||||||||||||||||||||||    
T  19998408 aatactccctccggtccttattataagaaacttttgactttttatattcattgagtaattaatatatcttgttgtaaatatagactagatacatcactta 19998507  T
Q  286 tacaatgaaccnnnnnnntcaattgtttcttataataag 324  Q
     |||||||| |       |||||||||||||||||||||    
T  19998508 cacaatgaatctaaaaattcaattgtttcttataataag 19998546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 192 - 324
Target Start/End: Original strand, 31050253 - 31050385
Alignment:
Q  192 ccctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcacttatacaat 291  Q
    ||||| ||||||| ||| ||||||   ||||||||||||||||||||  ||||||||||||||| |||||||||||||||| |||||||||||| |||||    
T  31050253 ccctctggtccttattataagaaacttttgactttttagattcattgtgtaattaatgtattttgttgtaaatatagactaaatacatcacttacacaat 31050352  T
Q  292 gaaccnnnnnnntcaattgtttcttataataag 324  Q
     ||||       |||||||||||||||||||||    
T  31050353 aaacctaaaaagtcaattgtttcttataataag 31050385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 213 - 296
Target Start/End: Original strand, 44224293 - 44224376
Alignment:
Q  213 aaaaagttgactttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcacttatacaatgaacc 296  Q
    ||||| |||||||||||||||||| ||||||||||||||| ||||||||||||||| ||||||||||||||| |||||||||||    
T  44224293 aaaaaattgactttttagattcatagaataattaatgtatcttattgtaaatatagtctagatacatcacttgtacaatgaacc 44224376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 210 - 324
Target Start/End: Complemental strand, 45977221 - 45977107
Alignment:
Q  210 aagaaaaagttgactttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcacttatacaatgaaccnnnnnnntcaatt 309  Q
    ||||||||||||||||||||  || || ||||||||||||||| ||||||||||||||||||||||||||||| |||||||| ||||       | ||||    
T  45977221 aagaaaaagttgactttttacgtttatagaataattaatgtatcttattgtaaatatagactagatacatcacctatacaataaaccaaaaaagttaatt 45977122  T
Q  310 gtttcttataataag 324  Q
    |||||||||||||||    
T  45977121 gtttcttataataag 45977107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 207 - 276
Target Start/End: Original strand, 32837654 - 32837723
Alignment:
Q  207 tacaagaaaaagttgactttttagattcattgaataattaatgtattttattgtaaatatagactagata 276  Q
    |||||||||||||||||||||||| ||||| ||||||||||||||||||||||| |||||||||||||||    
T  32837654 tacaagaaaaagttgactttttaggttcatagaataattaatgtattttattgttaatatagactagata 32837723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 219 - 295
Target Start/End: Original strand, 29438168 - 29438244
Alignment:
Q  219 ttgactttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcacttatacaatgaac 295  Q
    |||||||||||| ||||| ||||||||||||||| |||||| ||||||||||||||||||||||||| |||||||||    
T  29438168 ttgactttttaggttcatagaataattaatgtatcttattgaaaatatagactagatacatcacttacacaatgaac 29438244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 200 - 295
Target Start/End: Complemental strand, 27687978 - 27687883
Alignment:
Q  200 tccttgttacaagaaaaagttgactttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcacttatacaatgaac 295  Q
    ||||||||| |||||||| || ||||||||  || || ||||||||||||||| |||||||||||||||||||||||||||||||| | |||||||    
T  27687978 tccttgttataagaaaaaattaactttttaagtttatagaataattaatgtatcttattgtaaatatagactagatacatcacttacataatgaac 27687883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 187 - 294
Target Start/End: Original strand, 51590428 - 51590535
Alignment:
Q  187 ataccccctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcacttat 286  Q
    |||| ||||||||||||| ||| || ||| | |||||||||| | ||||| ||||||||||||||| || || ||||||||||||||||||||||||||     
T  51590428 atactccctccggtccttattataaaaaacaattgacttttttggttcatagaataattaatgtatcttgttataaatatagactagatacatcacttac 51590527  T
Q  287 acaatgaa 294  Q
    ||||||||    
T  51590528 acaatgaa 51590535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 221 - 291
Target Start/End: Original strand, 13770741 - 13770811
Alignment:
Q  221 gactttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcacttatacaat 291  Q
    |||| ||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||| |||||    
T  13770741 gactatttagattcatagaataattaatgtatcttattgtaaatatagactagatacatcacttacacaat 13770811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 192 - 291
Target Start/End: Complemental strand, 13320448 - 13320349
Alignment:
Q  192 ccctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcacttatacaat 291  Q
    |||||| ||| || ||| ||||||||||||||||||||||||||| ||||||||||| ||| |||||||||||||||  || |||||||| ||| |||||    
T  13320448 ccctccagtctttattataagaaaaagttgactttttagattcatagaataattaatatatcttattgtaaatatagtttaaatacatcatttacacaat 13320349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 219 - 324
Target Start/End: Complemental strand, 34175004 - 34174899
Alignment:
Q  219 ttgactttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcacttatacaatgaaccnnnnnnntcaattgtttcttat 318  Q
    |||| |||||| ||||| ||| |||||||||||| || ||| ||||||| |||| |||||||||||| ||||||||||       |||||||||||||||    
T  34175004 ttgattttttaaattcaatgagtaattaatgtatcttgttgcaaatataaactaaatacatcacttacacaatgaacctaaaaagtcaattgtttcttat 34174905  T
Q  319 aataag 324  Q
    ||||||    
T  34174904 aataag 34174899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 192 - 324
Target Start/End: Original strand, 13321717 - 13321849
Alignment:
Q  192 ccctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcacttatacaat 291  Q
    ||||||| ||||| |||||||||| | || ||||||| | || ||  |||||||||||||| || || |||||||||||||||||||||||||| | |||    
T  13321717 ccctccgatccttattacaagaaacaattaacttttttggtttataaaataattaatgtatcttgttataaatatagactagatacatcacttacataat 13321816  T
Q  292 gaaccnnnnnnntcaattgtttcttataataag 324  Q
    ||| |       |||| ||||||||||||||||    
T  13321817 gaatctaaaaaatcaaatgtttcttataataag 13321849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 193 - 250
Target Start/End: Complemental strand, 29256742 - 29256685
Alignment:
Q  193 cctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgt 250  Q
    |||||||||||  ||| |||||||||||||||||||||||||||||| ||||||||||    
T  29256742 cctccggtcctatttataagaaaaagttgactttttagattcattgagtaattaatgt 29256685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 193 - 254
Target Start/End: Complemental strand, 50155442 - 50155381
Alignment:
Q  193 cctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtattt 254  Q
    |||||||||||  ||| |||||||||||||||||||||||||||||| ||||| ||||||||    
T  50155442 cctccggtcctatttataagaaaaagttgactttttagattcattgagtaattgatgtattt 50155381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 222 - 281
Target Start/End: Complemental strand, 12175566 - 12175507
Alignment:
Q  222 actttttagattcattgaataattaatgtattttattgtaaatatagactagatacatca 281  Q
    ||||||||| ||||||||| ||||||||||| || || ||||||||||||||||||||||    
T  12175566 actttttaggttcattgaacaattaatgtatcttgttataaatatagactagatacatca 12175507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 294
Target Start/End: Complemental strand, 29064247 - 29064192
Alignment:
Q  239 aataattaatgtattttattgtaaatatagactagatacatcacttatacaatgaa 294  Q
    |||||||||| |||||||||||||||||||| || |||||||| ||||||||||||    
T  29064247 aataattaatatattttattgtaaatatagattaaatacatcatttatacaatgaa 29064192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 195 - 294
Target Start/End: Original strand, 49944839 - 49944938
Alignment:
Q  195 tccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcacttatacaatgaa 294  Q
    |||||||||  ||| |||||||| || |||||||||||||||||||||||| |||||| || |    ||||||||| | |||||||| ||||||||||||    
T  49944839 tccggtcctatttataagaaaaatttaactttttagattcattgaataattgatgtatcttgtctagaatatagaccaaatacatcatttatacaatgaa 49944938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 194 - 244
Target Start/End: Complemental strand, 33325476 - 33325426
Alignment:
Q  194 ctccggtccttgttacaagaaaaagttgactttttagattcattgaataat 244  Q
    ||||||||||  ||||||||||||||||||||||||||| |||||||||||    
T  33325476 ctccggtcctatttacaagaaaaagttgactttttagatacattgaataat 33325426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 186 - 251
Target Start/End: Original strand, 26924210 - 26924275
Alignment:
Q  186 aataccccctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgta 251  Q
    ||||| ||||||||||||  ||| |||||||||||||||||||| ||||||||| | |||||||||    
T  26924210 aatactccctccggtcctatttataagaaaaagttgactttttaaattcattgagtcattaatgta 26924275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 210 - 294
Target Start/End: Original strand, 640543 - 640626
Alignment:
Q  210 aagaaaaagttgactttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcacttatacaatgaa 294  Q
    |||||||| ||||||||||||||||| ||| ||||| |||||| ||||   |||||||||||| |||||| | ||||||||||||    
T  640543 aagaaaaaattgactttttagattca-tgagtaattgatgtatcttatctaaaatatagactaaatacataatttatacaatgaa 640626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 186 - 238
Target Start/End: Complemental strand, 51590581 - 51590529
Alignment:
Q  186 aataccccctccggtccttgttacaagaaaaagttgactttttagattcattg 238  Q
    ||||| ||||||||||||| ||| |||||||||||||| ||||||||||||||    
T  51590581 aatactccctccggtccttattataagaaaaagttgaccttttagattcattg 51590529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 210 - 245
Target Start/End: Original strand, 18744580 - 18744615
Alignment:
Q  210 aagaaaaagttgactttttagattcattgaataatt 245  Q
    ||||||||||||||||||||||||||||||||||||    
T  18744580 aagaaaaagttgactttttagattcattgaataatt 18744615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 192 - 291
Target Start/End: Complemental strand, 22182910 - 22182811
Alignment:
Q  192 ccctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcacttatacaat 291  Q
    ||||||||||||| ||| ||| || | |||||||||||  ||||||| |||||||||| || |  || ||||||| | |||||||||||||||| |||||    
T  22182910 ccctccggtccttattataagcaacaattgactttttaagttcattggataattaatgcatctcgttataaatatgggctagatacatcacttacacaat 22182811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 193 - 252
Target Start/End: Complemental strand, 38040420 - 38040361
Alignment:
Q  193 cctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtat 252  Q
    |||||||||||  ||| |||||||| ||||||||||||||||||||| ||||| ||||||    
T  38040420 cctccggtcctatttataagaaaaatttgactttttagattcattgattaattgatgtat 38040361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 193 - 251
Target Start/End: Complemental strand, 43929489 - 43929431
Alignment:
Q  193 cctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgta 251  Q
    |||||||||||  ||| ||||||||||| |||||||||||||||| ||||||| |||||    
T  43929489 cctccggtcctatttataagaaaaagttaactttttagattcattcaataattgatgta 43929431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 187 - 244
Target Start/End: Complemental strand, 2352459 - 2352402
Alignment:
Q  187 ataccccctccggtccttgttacaagaaaaagttgactttttagattcattgaataat 244  Q
    |||| ||||||||||||  |||||||| | |||||||||||||||| |||||||||||    
T  2352459 atactccctccggtcctatttacaagagacagttgactttttagatacattgaataat 2352402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 187 - 244
Target Start/End: Original strand, 2961102 - 2961159
Alignment:
Q  187 ataccccctccggtccttgttacaagaaaaagttgactttttagattcattgaataat 244  Q
    |||| ||||||||||||  |||||||| |||||||||||||||||| |||| ||||||    
T  2961102 atactccctccggtcctatttacaagagaaagttgactttttagatacattcaataat 2961159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 210 - 295
Target Start/End: Original strand, 48565548 - 48565633
Alignment:
Q  210 aagaaaaagttgactttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcacttatacaatgaac 295  Q
    |||||| | |||| ||||| | ||||| |||||||||| |||| || || ||||||||||||| ||||||||| || |||||||||    
T  48565548 aagaaataattgatttttttggttcatagaataattaaagtatcttgttataaatatagactaaatacatcacctacacaatgaac 48565633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 210 - 294
Target Start/End: Original strand, 15342958 - 15343042
Alignment:
Q  210 aagaaaaagttgactttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcacttatacaatgaa 294  Q
    ||||||||||||| |||||||||||||||  |||||||||||| || |    ||||||||| | |||||||| |||| |||||||    
T  15342958 aagaaaaagttgaatttttagattcattgtgtaattaatgtatcttgtctagaatatagaccaaatacatcatttatgcaatgaa 15343042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 186 - 294
Target Start/End: Original strand, 18038685 - 18038793
Alignment:
Q  186 aataccccctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcactta 285  Q
    ||||| |||||  |||||| ||| |||||| | |||||||||||| |||||||  ||| | |||||| |  || ||||| |||| |||||||||||||||    
T  18038685 aatactccctctagtccttattataagaaatatttgactttttaggttcattgcttaagtgatgtatctcgttataaatgtagattagatacatcactta 18038784  T
Q  286 tacaatgaa 294  Q
     ||||||||    
T  18038785 aacaatgaa 18038793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 224 - 296
Target Start/End: Original strand, 20486692 - 20486764
Alignment:
Q  224 tttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcacttatacaatgaacc 296  Q
    ||||||||||||||| |||||||| |||  || |||||||||||| ||||||| |||||| | ||||| ||||    
T  20486692 tttttagattcattgtataattaacgtaacttcttgtaaatataggctagatatatcactaacacaataaacc 20486764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 186 - 254
Target Start/End: Complemental strand, 26924364 - 26924296
Alignment:
Q  186 aataccccctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtattt 254  Q
    ||||| ||||||||||||  ||| |||||| | |||||||||| |||||||||||||| | ||||||||    
T  26924364 aatactccctccggtcctatttataagaaacatttgacttttttgattcattgaataaatgatgtattt 26924296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 210 - 254
Target Start/End: Complemental strand, 34146931 - 34146887
Alignment:
Q  210 aagaaaaagttgactttttagattcattgaataattaatgtattt 254  Q
    |||||||| |||| ||||| |||||||||||||||||||||||||    
T  34146931 aagaaaaaattgatttttttgattcattgaataattaatgtattt 34146887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 210 - 294
Target Start/End: Original strand, 34332497 - 34332581
Alignment:
Q  210 aagaaaaagttgactttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcacttatacaatgaa 294  Q
    |||||||  ||||||||||||||||||||| ||||| ||||||||| |    ||||||||| | |||||||| |||| |||||||    
T  34332497 aagaaaactttgactttttagattcattgagtaattgatgtattttgtctagaatatagaccaaatacatcatttatccaatgaa 34332581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 193 - 244
Target Start/End: Complemental strand, 26545141 - 26545090
Alignment:
Q  193 cctccggtccttgttacaagaaaaagttgactttttagattcattgaataat 244  Q
    ||||||||| |  |||||||| |||||||||||||||||| |||||||||||    
T  26545141 cctccggtcttatttacaagagaaagttgactttttagatacattgaataat 26545090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 193 - 244
Target Start/End: Original strand, 26550291 - 26550342
Alignment:
Q  193 cctccggtccttgttacaagaaaaagttgactttttagattcattgaataat 244  Q
    |||||| ||||  |||||||| |||||||||||||||||| |||||||||||    
T  26550291 cctccgatcctatttacaagagaaagttgactttttagatacattgaataat 26550342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 195 - 254
Target Start/End: Complemental strand, 28359064 - 28359005
Alignment:
Q  195 tccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtattt 254  Q
    |||||||||  ||| ||||||||  ||| |||||| ||||||||||||||||||||||||    
T  28359064 tccggtcctatttataagaaaaaaatgaatttttaaattcattgaataattaatgtattt 28359005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 210 - 252
Target Start/End: Complemental strand, 7375596 - 7375554
Alignment:
Q  210 aagaaaaagttgactttttagattcattgaataattaatgtat 252  Q
    |||||||| ||||||||||||||||||||  ||||||||||||    
T  7375596 aagaaaaaattgactttttagattcattgtgtaattaatgtat 7375554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 206 - 244
Target Start/End: Complemental strand, 15289904 - 15289866
Alignment:
Q  206 ttacaagaaaaagttgactttttagattcattgaataat 244  Q
    |||||||| |||||||||||||||||| |||||||||||    
T  15289904 ttacaagagaaagttgactttttagatacattgaataat 15289866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 210 - 252
Target Start/End: Original strand, 23923571 - 23923613
Alignment:
Q  210 aagaaaaagttgactttttagattcattgaataattaatgtat 252  Q
    |||||||| |||| |||||||||||||||| ||||||||||||    
T  23923571 aagaaaaatttgaatttttagattcattgagtaattaatgtat 23923613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 220 - 254
Target Start/End: Original strand, 25021262 - 25021296
Alignment:
Q  220 tgactttttagattcattgaataattaatgtattt 254  Q
    |||||||||||||||||||||||||| ||||||||    
T  25021262 tgactttttagattcattgaataattgatgtattt 25021296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 206 - 252
Target Start/End: Complemental strand, 25021362 - 25021316
Alignment:
Q  206 ttacaagaaaaagttgactttttagattcattgaataattaatgtat 252  Q
    |||||||||| | ||||||||||||||| ||||||||||| ||||||    
T  25021362 ttacaagaaacaattgactttttagatttattgaataattgatgtat 25021316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 187 - 261
Target Start/End: Complemental strand, 25238723 - 25238649
Alignment:
Q  187 ataccccctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtattttattgta 261  Q
    |||| |||||| |||||| ||| || ||| | |||||||||||| ||||| ||||||||||||||| || |||||    
T  25238723 atactccctcctgtccttattataaaaaacaattgactttttaggttcatagaataattaatgtatcttgttgta 25238649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 187 - 252
Target Start/End: Complemental strand, 5368920 - 5368855
Alignment:
Q  187 ataccccctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtat 252  Q
    |||| |||||||||| |  ||| ||| |||| || ||||||||||| |||||||||||||||||||    
T  5368920 atactccctccggtcatatttataagcaaaaattaactttttagatgcattgaataattaatgtat 5368855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 210 - 251
Target Start/End: Original strand, 6793615 - 6793656
Alignment:
Q  210 aagaaaaagttgactttttagattcattgaataattaatgta 251  Q
    ||||||||||| | |||||| |||||||||||||||||||||    
T  6793615 aagaaaaagttaattttttaaattcattgaataattaatgta 6793656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 254
Target Start/End: Original strand, 9548676 - 9548737
Alignment:
Q  193 cctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtattt 254  Q
    |||||||||||  |||||||||| | || ||||||||||| |||| ||||||| ||||||||    
T  9548676 cctccggtcctatttacaagaaacaatttactttttagatacattaaataatttatgtattt 9548737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 187 - 240
Target Start/End: Complemental strand, 9548822 - 9548769
Alignment:
Q  187 ataccccctccggtccttgttacaagaaaaagttgactttttagattcattgaa 240  Q
    |||| ||||||||||||  |||||||| ||| |||||||||||||| |||||||    
T  9548822 atactccctccggtcctatttacaagagaaaattgactttttagatacattgaa 9548769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 187 - 244
Target Start/End: Original strand, 10065253 - 10065310
Alignment:
Q  187 ataccccctccggtccttgttacaagaaaaagttgactttttagattcattgaataat 244  Q
    |||| ||||||||||||  |||||||| ||| |||| ||||||||| |||||||||||    
T  10065253 atactccctccggtcctatttacaagagaaaattgattttttagatacattgaataat 10065310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 254
Target Start/End: Original strand, 14281594 - 14281655
Alignment:
Q  193 cctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtattt 254  Q
    |||||||||||  |||||||| | | || ||||||||||| |||||||||||| ||||||||    
T  14281594 cctccggtcctatttacaagagacaatttactttttagatacattgaataatttatgtattt 14281655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 238
Target Start/End: Complemental strand, 18038840 - 18038787
Alignment:
Q  185 caataccccctccggtccttgttacaagaaaaagttgactttttagattcattg 238  Q
    |||||| ||||||||||||| ||| || ||| | ||||||||||||||||||||    
T  18038840 caatactccctccggtccttattataaaaaacatttgactttttagattcattg 18038787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 251
Target Start/End: Complemental strand, 26760324 - 26760259
Alignment:
Q  186 aataccccctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgta 251  Q
    ||||| ||||||||||||  ||| |||||||| |||| |||||| ||||||||| | |||||||||    
T  26760324 aatactccctccggtcctatttataagaaaaaattgattttttaaattcattgagtcattaatgta 26760259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 206 - 255
Target Start/End: Complemental strand, 27819443 - 27819394
Alignment:
Q  206 ttacaagaaaaagttgactttttagattcattgaataattaatgtatttt 255  Q
    |||||||||||| || ||||||||||||||||||||| ||  ||||||||    
T  27819443 ttacaagaaaaatttaactttttagattcattgaatatttggtgtatttt 27819394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 254
Target Start/End: Original strand, 38830487 - 38830548
Alignment:
Q  193 cctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtattt 254  Q
    |||||||||||  |||||||| | | || ||||||||||| |||||||||||| ||||||||    
T  38830487 cctccggtcctatttacaagagacaatttactttttagatacattgaataatttatgtattt 38830548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 228 - 285
Target Start/End: Complemental strand, 43851058 - 43851001
Alignment:
Q  228 tagattcattgaataattaatgtattttattgtaaatatagactagatacatcactta 285  Q
    |||||||||| |||||||||| ||| || || |||||||| | |||||||||||||||    
T  43851058 tagattcattaaataattaatatatcttgttataaatatatattagatacatcactta 43851001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 252
Target Start/End: Original strand, 47946007 - 47946064
Alignment:
Q  195 tccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtat 252  Q
    |||||||||  ||| |||||||  ||||||||||||||||||| |||||||| |||||    
T  47946007 tccggtcctatttataagaaaagcttgactttttagattcattaaataattattgtat 47946064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 242 - 324
Target Start/End: Complemental strand, 52030963 - 52030881
Alignment:
Q  242 aattaatgtattttattgtaaatatagactagatacatcacttatacaatgaaccnnnnnnntcaattgtttcttataataag 324  Q
    ||||||||||| ||||| |||||||| | ||||||||||||||| || ||||| |       |||||| ||||||||||||||    
T  52030963 aattaatgtatcttattataaatataaattagatacatcacttacacgatgaaactaaaaaatcaattttttcttataataag 52030881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 192 - 244
Target Start/End: Complemental strand, 28989417 - 28989365
Alignment:
Q  192 ccctccggtccttgttacaagaaaaagttgactttttagattcattgaataat 244  Q
    |||||||||| |  |||||||| ||||||||||| |||||| |||||||||||    
T  28989417 ccctccggtcttatttacaagagaaagttgacttattagatacattgaataat 28989365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 186 - 254
Target Start/End: Complemental strand, 34332627 - 34332559
Alignment:
Q  186 aataccccctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtattt 254  Q
    ||||||||||| ||||||  ||| |||||| | |||||||||| ||||||||| |||| | ||||||||    
T  34332627 aataccccctctggtcctatttataagaaacatttgacttttttgattcattggataaatgatgtattt 34332559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 196 - 252
Target Start/End: Complemental strand, 38738072 - 38738016
Alignment:
Q  196 ccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtat 252  Q
    ||||||||  ||| |||||||| || |||||||||||||||||| ||||| ||||||    
T  38738072 ccggtcctatttataagaaaaatttaactttttagattcattgagtaattgatgtat 38738016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 192 - 244
Target Start/End: Complemental strand, 38830628 - 38830576
Alignment:
Q  192 ccctccggtccttgttacaagaaaaagttgactttttagattcattgaataat 244  Q
    ||||||||||||  |||||||| | ||||||||||||| || |||||||||||    
T  38830628 ccctccggtcctatttacaagagacagttgactttttaaatacattgaataat 38830576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 210 - 294
Target Start/End: Complemental strand, 44939193 - 44939109
Alignment:
Q  210 aagaaaaagttgactttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcacttatacaatgaa 294  Q
    |||| ||| |||| |||||||||||||||| ||||| |||||| | ||    ||||||||| | |||||||| ||||||||||||    
T  44939193 aagagaaaattgattttttagattcattgagtaattgatgtatctaatctagaatatagaccaaatacatcatttatacaatgaa 44939109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0767 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0767
Description:

Target: scaffold0767; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 187 - 327
Target Start/End: Original strand, 3807 - 3947
Alignment:
Q  187 ataccccctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcacttat 286  Q
    |||| ||||||||||||| ||| |||||| | |||||||||| ||||||||||||| |||||| || |  || ||||||||||||||||||||||||||     
T  3807 atactccctccggtccttattataagaaacaattgacttttttgattcattgaatacttaatgcatctcgttataaatatagactagatacatcacttac 3906  T
Q  287 acaatgaaccnnnnnnntcaattgtttcttataataagtga 327  Q
    ||||||||||       ||||||||||||||||||||||||    
T  3907 acaatgaacctaaaaagtcaattgtttcttataataagtga 3947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 67; Significance: 1e-29; HSPs: 2)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 186 - 296
Target Start/End: Complemental strand, 40342 - 40232
Alignment:
Q  186 aataccccctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcactta 285  Q
    ||||| ||||||||||||| ||| ||||||   ||||||||||||||||||||| |||||||| ||| || |||||||||||||||||||||||||||||    
T  40342 aatactccctccggtccttattataagaaacttttgactttttagattcattgagtaattaatatatcttgttgtaaatatagactagatacatcactta 40243  T
Q  286 tacaatgaacc 296  Q
     ||||||||||    
T  40242 cacaatgaacc 40232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 186 - 253
Target Start/End: Complemental strand, 1683 - 1616
Alignment:
Q  186 aataccccctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtatt 253  Q
    ||||| |||||||||| |  ||| |||||||| || | |||||||||||||||||||||| |||||||    
T  1683 aatactccctccggtcttatttataagaaaaaattaattttttagattcattgaataattgatgtatt 1616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059 (Bit Score: 62; Significance: 9e-27; HSPs: 1)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 187 - 296
Target Start/End: Complemental strand, 26736 - 26627
Alignment:
Q  187 ataccccctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcacttat 286  Q
    |||| ||||||||||||| ||| ||||||   |||| |||||||||||||||| |||||||||||| || |||||||||||||||||||||||||||||     
T  26736 atactccctccggtccttattataagaaacttttgattttttagattcattgagtaattaatgtatcttgttgtaaatatagactagatacatcacttac 26637  T
Q  287 acaatgaacc 296  Q
    | ||||||||    
T  26636 ataatgaacc 26627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0200 (Bit Score: 61; Significance: 4e-26; HSPs: 1)
Name: scaffold0200
Description:

Target: scaffold0200; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 193 - 296
Target Start/End: Complemental strand, 25759 - 25655
Alignment:
Q  193 cctccggtccttgttacaagaaaaagttgacttttt-agattcattgaataattaatgtattttattgtaaatatagactagatacatcacttatacaat 291  Q
    |||||||||||| ||| ||||||||||||||||||| |  ||||| ||||||||||||||| ||||| |||||||||||||||||||||||||||| |||    
T  25759 cctccggtccttattataagaaaaagttgacttttttacgttcatagaataattaatgtatcttattataaatatagactagatacatcacttatataat 25660  T
Q  292 gaacc 296  Q
     ||||    
T  25659 aaacc 25655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 61; Significance: 4e-26; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 187 - 324
Target Start/End: Complemental strand, 112973 - 112836
Alignment:
Q  187 ataccccctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcacttat 286  Q
    |||| |||||||||||||   | |||||| | ||||||||||||||| |||||||||||||||||| || || |||||||||| ||||||||||| || |    
T  112973 atactccctccggtccttaacataagaaacaattgactttttagatttattgaataattaatgtatcttgttataaatatagattagatacatcatttgt 112874  T
Q  287 acaatgaaccnnnnnnntcaattgtttcttataataag 324  Q
    ||||||||||       |||||||||||||||||||||    
T  112873 acaatgaacctaaaacgtcaattgtttcttataataag 112836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0533 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0533
Description:

Target: scaffold0533; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 196 - 324
Target Start/End: Complemental strand, 3381 - 3253
Alignment:
Q  196 ccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcacttatacaatgaac 295  Q
    ||||||||| ||| |||||| | || ||||||||  || |||||||||| |||||||||   | |||||||||||||||||||||||||| |||||||||    
T  3381 ccggtccttattataagaaacaattaactttttaagttaattgaataatcaatgtatttcgatataaatatagactagatacatcacttacacaatgaac 3282  T
Q  296 cnnnnnnntcaattgtttcttataataag 324  Q
            |||||||||||||||||||||    
T  3281 ataaaaagtcaattgtttcttataataag 3253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 192 - 287
Target Start/End: Original strand, 17388 - 17483
Alignment:
Q  192 ccctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcacttata 287  Q
    |||||||||| || ||| ||||||   |||| |||||||||||||||| |||||||||||| || | |||||||||||||||| ||||||||||||    
T  17388 ccctccggtctttattataagaaacttttgattttttagattcattgagtaattaatgtatcttgtagtaaatatagactagacacatcacttata 17483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 210 - 294
Target Start/End: Complemental strand, 5541 - 5457
Alignment:
Q  210 aagaaaaagttgactttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcacttatacaatgaa 294  Q
    |||||| | ||||||||||||||||||||||||||||||||||  | |  |||||||||||| ||||| ||||||| ||||||||    
T  5541 aagaaataattgactttttagattcattgaataattaatgtatactgtaataaatatagactcgatacttcacttacacaatgaa 5457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 200 - 285
Target Start/End: Original strand, 19308 - 19390
Alignment:
Q  200 tccttgttacaagaaaaagttgactttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcactta 285  Q
    ||||| ||| |||||||||||||||||||||||||||   | ||||||| ||| |||||||||||||||||||  |||||||||||    
T  19308 tccttattataagaaaaagttgactttttagattcat---agaattaatatatcttattgtaaatatagactacttacatcactta 19390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0287 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0287
Description:

Target: scaffold0287; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 198 - 324
Target Start/End: Original strand, 12755 - 12881
Alignment:
Q  198 ggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcacttatacaatgaaccn 297  Q
    ||||||| ||| |||||| | |||||||||||| |||||||  ||| | |||||| |  || ||||| |||||||||||||||||||| | ||||||||     
T  12755 ggtccttattataagaaatatttgactttttaggttcattgtttaagtgatgtatctcgttataaatgtagactagatacatcacttaaataatgaacct 12854  T
Q  298 nnnnnntcaattgtttcttataataag 324  Q
          |||| ||||||||||||||||    
T  12855 aaaaagtcaaatgtttcttataataag 12881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0460 (Bit Score: 37; Significance: 0.000000000008; HSPs: 2)
Name: scaffold0460
Description:

Target: scaffold0460; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 224 - 296
Target Start/End: Original strand, 12248 - 12320
Alignment:
Q  224 tttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcacttatacaatgaacc 296  Q
    |||||||||| |||| |||||||| |||| || |||||||||||| |||||||||||||| | ||||| ||||    
T  12248 tttttagatttattgtataattaacgtatcttcttgtaaatataggctagatacatcactaacacaataaacc 12320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0460; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 224 - 296
Target Start/End: Original strand, 7681 - 7753
Alignment:
Q  224 tttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcacttatacaatgaacc 296  Q
    ||||||||||||||| |||||||| |||  || |||||||||||| ||||||| |||||| | ||||| ||||    
T  7681 tttttagattcattgtataattaacgtaacttcttgtaaatataggctagatatatcactaacacaataaacc 7753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0221 (Bit Score: 37; Significance: 0.000000000008; HSPs: 2)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 192 - 244
Target Start/End: Complemental strand, 11175 - 11123
Alignment:
Q  192 ccctccggtccttgttacaagaaaaagttgactttttagattcattgaataat 244  Q
    ||||||||||||  |||||||| |||||||||||||||||| |||||||||||    
T  11175 ccctccggtcctatttacaagagaaagttgactttttagatacattgaataat 11123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0221; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 186 - 254
Target Start/End: Original strand, 11027 - 11095
Alignment:
Q  186 aataccccctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtattt 254  Q
    ||||| ||||||||||||| |||||||| | | || ||||||||||| |||| ||||||| ||||||||    
T  11027 aatactccctccggtcctttttacaagagacaatttactttttagatacattaaataatttatgtattt 11095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 193 - 244
Target Start/End: Complemental strand, 29388 - 29337
Alignment:
Q  193 cctccggtccttgttacaagaaaaagttgactttttagattcattgaataat 244  Q
    |||||||||||  |||||||| |||||||||||||||||| |||||||||||    
T  29388 cctccggtcctatttacaagagaaagttgactttttagatacattgaataat 29337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 192 - 254
Target Start/End: Original strand, 29247 - 29309
Alignment:
Q  192 ccctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtattt 254  Q
    ||||||||||||  |||||||||| | || ||||||||||| |||| ||||||| ||||||||    
T  29247 ccctccggtcctatttacaagaaacaatttactttttagatacattaaataatttatgtattt 29309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2107 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold2107
Description:

Target: scaffold2107; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 186 - 244
Target Start/End: Complemental strand, 594 - 536
Alignment:
Q  186 aataccccctccggtccttgttacaagaaaaagttgactttttagattcattgaataat 244  Q
    ||||| ||||||||||||  |||||||| ||| |||||||||||||| |||||||||||    
T  594 aatactccctccggtcctatttacaagagaaaattgactttttagatacattgaataat 536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 213 - 294
Target Start/End: Complemental strand, 71973 - 71892
Alignment:
Q  213 aaaaagttgactttttagattcattgaataattaatgtattttattgtaaatatagactagatacatcacttatacaatgaa 294  Q
    |||||||||| || ||| ||||||||  ||||||||||||||| |   |||||||||||| |||||| | ||||||||||||    
T  71973 aaaaagttgatttattaaattcattgtgtaattaatgtattttgtataaaatatagactaaatacataatttatacaatgaa 71892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 192 - 252
Target Start/End: Original strand, 77348 - 77408
Alignment:
Q  192 ccctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtat 252  Q
    ||||||||||||  ||| |||| ||||||||||||| |||| |||||||||||| ||||||    
T  77348 ccctccggtcctatttataagagaaagttgacttttcagatacattgaataatttatgtat 77408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 32; Significance: 0.000000008; HSPs: 3)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 187 - 254
Target Start/End: Original strand, 492303 - 492370
Alignment:
Q  187 ataccccctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtattt 254  Q
    |||| ||||||||||||  ||| |||| |||||||| ||||||||| |||||||||||  ||||||||    
T  492303 atactccctccggtcctatttataagagaaagttgattttttagatacattgaataatgtatgtattt 492370  T

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Target: scaffold0002; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 219 - 253
Target Start/End: Complemental strand, 423366 - 423332
Alignment:
Q  219 ttgactttttagattcattgaataattaatgtatt 253  Q
    ||||||||||||||||||||||||||| |||||||    
T  423366 ttgactttttagattcattgaataattgatgtatt 423332  T

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Target: scaffold0002; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 186 - 254
Target Start/End: Complemental strand, 492456 - 492388
Alignment:
Q  186 aataccccctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtattt 254  Q
    ||||| |||||| |||||  |||||||||| | || ||||||||||| |||| ||||||| ||||||||    
T  492456 aatactccctccagtcctatttacaagaaacaatttactttttagatacattaaataatttatgtattt 492388  T

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Target: scaffold0592 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0592
Description:

Target: scaffold0592; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 186 - 244
Target Start/End: Complemental strand, 530 - 472
Alignment:
Q  186 aataccccctccggtccttgttacaagaaaaagttgactttttagattcattgaataat 244  Q
    ||||| ||||||| ||||  |||||||| || ||||||||||||||| |||||||||||    
T  530 aatactccctccgatcctatttacaagagaaggttgactttttagatacattgaataat 472  T

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Target: scaffold0242 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0242
Description:

Target: scaffold0242; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 251
Target Start/End: Original strand, 16511 - 16569
Alignment:
Q  193 cctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgta 251  Q
    ||||| |||||  ||||||||||||||| | |||||||||||||| ||||||| |||||    
T  16511 cctccagtcctatttacaagaaaaagttaattttttagattcattcaataattgatgta 16569  T

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Target: scaffold0024 (Bit Score: 30; Significance: 0.0000001; HSPs: 2)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 255
Target Start/End: Original strand, 35951 - 36020
Alignment:
Q  186 aataccccctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtatttt 255  Q
    ||||| ||||||||||||  |||||||| | | || ||||||||||| |||| ||||||| |||||||||    
T  35951 aatactccctccggtcctatttacaagagacaatttactttttagatacattaaataatttatgtatttt 36020  T

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Target: scaffold0024; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 192 - 244
Target Start/End: Complemental strand, 36099 - 36047
Alignment:
Q  192 ccctccggtccttgttacaagaaaaagttgactttttagattcattgaataat 244  Q
    ||||||||||||  |||||||| ||| |||||||||||||| |||| ||||||    
T  36099 ccctccggtcctatttacaagagaaaattgactttttagatgcattcaataat 36047  T

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Target: scaffold0144 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0144
Description:

Target: scaffold0144; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 194 - 254
Target Start/End: Original strand, 38830 - 38890
Alignment:
Q  194 ctccggtccttgttacaagaaaaagttgactttttagattcattgaataattaatgtattt 254  Q
    |||||||||| ||||||||| | | || ||||||||||| |||| ||||||| ||||||||    
T  38830 ctccggtcctagttacaagagacaatttactttttagatacattaaataatttatgtattt 38890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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