View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2045_low_35 (Length: 226)
Name: NF2045_low_35
Description: NF2045
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2045_low_35 |
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Alignment Details
Target: chr4 (Bit Score: 213; Significance: 1e-117; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 38239179 - 38239395
Alignment:
| Q |
1 |
attgtatacataacaacagcagaaacattgcccataataataccaaatctctagctacaaaactcatgttgatctgtcagggaagaaattattagttatt |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38239179 |
attgtatacataacaacagcagaaacattgcccataataataccaaatctctagctacaaaactcatgttgatctgtcagggaagaaattattagttatt |
38239278 |
T |
|
| Q |
101 |
aactaactaattgttgattaaagacataccaaaacaagataaataagcatggttggatctaacacaaaactgatttgtggaatgaggagtgtctctcttt |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
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| T |
38239279 |
aactaactaattgttgattaaagacataccaaaacaagataaataagcatggttggatctaacacaaaactgatttgtggagtgaggagtgtctctcttt |
38239378 |
T |
|
| Q |
201 |
ataaactctattcgtta |
217 |
Q |
| |
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||||||||||||||||| |
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| T |
38239379 |
ataaactctattcgtta |
38239395 |
T |
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