View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2045_low_36 (Length: 214)

Name: NF2045_low_36
Description: NF2045
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2045_low_36
NF2045_low_36
[»] chr8 (17 HSPs)
chr8 (1-197)||(7933476-7933672)
chr8 (1-196)||(14394174-14394369)
chr8 (1-197)||(24219822-24220018)
chr8 (1-123)||(29336686-29336808)
chr8 (1-122)||(36425354-36425476)
chr8 (1-107)||(11357832-11357939)
chr8 (1-107)||(45068055-45068162)
chr8 (1-122)||(15012864-15012986)
chr8 (1-106)||(1238690-1238797)
chr8 (1-122)||(6464200-6464322)
chr8 (1-122)||(7311825-7311947)
chr8 (1-122)||(8012944-8013066)
chr8 (29-122)||(26250216-26250310)
chr8 (1-122)||(36005106-36005228)
chr8 (1-122)||(36076443-36076565)
chr8 (21-62)||(3298970-3299011)
chr8 (73-122)||(36021422-36021471)
[»] chr3 (23 HSPs)
chr3 (1-197)||(4591271-4591467)
chr3 (7-197)||(20949739-20949930)
chr3 (1-197)||(4644012-4644208)
chr3 (1-197)||(25692456-25692653)
chr3 (1-197)||(17735819-17736015)
chr3 (1-197)||(19037088-19037284)
chr3 (21-142)||(24705306-24705432)
chr3 (1-197)||(460980-461176)
chr3 (1-122)||(10940928-10941050)
chr3 (1-122)||(27501591-27501713)
chr3 (1-123)||(2786180-2786302)
chr3 (1-122)||(4311110-4311232)
chr3 (1-122)||(6036742-6036864)
chr3 (1-122)||(24179550-24179672)
chr3 (1-122)||(32746846-32746968)
chr3 (1-122)||(43932053-43932175)
chr3 (28-122)||(25893729-25893824)
chr3 (1-122)||(23068940-23069062)
chr3 (1-122)||(43995553-43995674)
chr3 (1-107)||(20650764-20650871)
chr3 (73-122)||(9570171-9570220)
chr3 (73-122)||(9576673-9576722)
chr3 (21-62)||(9989564-9989605)
[»] chr5 (27 HSPs)
chr5 (1-197)||(9843825-9844021)
chr5 (1-197)||(2155671-2155866)
chr5 (1-197)||(3412840-3413036)
chr5 (1-197)||(12918500-12918696)
chr5 (1-197)||(19853078-19853274)
chr5 (1-140)||(30579796-30579936)
chr5 (12-134)||(34738626-34738748)
chr5 (1-194)||(42747561-42747754)
chr5 (1-122)||(2958335-2958457)
chr5 (1-122)||(2966804-2966926)
chr5 (1-122)||(4974039-4974161)
chr5 (1-122)||(25894273-25894395)
chr5 (1-107)||(40958256-40958363)
chr5 (1-122)||(42151295-42151417)
chr5 (1-107)||(2439277-2439384)
chr5 (26-122)||(12505389-12505486)
chr5 (125-197)||(3664176-3664248)
chr5 (1-107)||(5876694-5876801)
chr5 (1-122)||(29414292-29414415)
chr5 (1-122)||(22360440-22360562)
chr5 (1-122)||(29980935-29981057)
chr5 (1-122)||(34356912-34357034)
chr5 (1-122)||(34358703-34358825)
chr5 (1-42)||(3664103-3664144)
chr5 (21-62)||(11766923-11766964)
chr5 (21-62)||(31846148-31846189)
chr5 (21-62)||(33434771-33434812)
[»] chr7 (29 HSPs)
chr7 (1-197)||(10830675-10830871)
chr7 (1-197)||(11024467-11024663)
chr7 (1-197)||(21900739-21900934)
chr7 (1-148)||(8881011-8881158)
chr7 (1-122)||(19090284-19090407)
chr7 (1-122)||(6020488-6020610)
chr7 (1-122)||(8185016-8185138)
chr7 (1-122)||(8192576-8192698)
chr7 (1-122)||(14288191-14288313)
chr7 (1-122)||(22853830-22853952)
chr7 (1-122)||(23612865-23612987)
chr7 (1-122)||(26602388-26602510)
chr7 (1-122)||(33850267-33850389)
chr7 (1-122)||(36876021-36876143)
chr7 (1-122)||(48353104-48353226)
chr7 (1-107)||(1948272-1948379)
chr7 (1-107)||(48346735-48346842)
chr7 (1-122)||(14299376-14299498)
chr7 (1-122)||(15915113-15915235)
chr7 (1-122)||(15949634-15949756)
chr7 (1-122)||(21642994-21643116)
chr7 (1-122)||(39433383-39433505)
chr7 (1-122)||(3923717-3923839)
chr7 (1-122)||(8142068-8142191)
chr7 (1-122)||(1379423-1379545)
chr7 (1-122)||(2447122-2447244)
chr7 (1-122)||(5049536-5049658)
chr7 (1-122)||(6795914-6796036)
chr7 (1-122)||(9642540-9642662)
[»] chr6 (19 HSPs)
chr6 (1-197)||(10081112-10081308)
chr6 (1-197)||(9846997-9847194)
chr6 (6-197)||(11016569-11016760)
chr6 (27-122)||(22870742-22870837)
chr6 (1-122)||(4019859-4019981)
chr6 (1-122)||(4026285-4026407)
chr6 (1-122)||(7062140-7062262)
chr6 (1-122)||(7069326-7069448)
chr6 (1-122)||(34655727-34655849)
chr6 (1-122)||(9864384-9864506)
chr6 (1-122)||(31548371-31548493)
chr6 (1-122)||(34649276-34649398)
chr6 (1-107)||(21262212-21262320)
chr6 (1-107)||(27670570-27670677)
chr6 (1-122)||(29907335-29907457)
chr6 (1-122)||(13671438-13671563)
chr6 (1-122)||(31128914-31129037)
chr6 (1-122)||(1428047-1428169)
chr6 (73-122)||(4718164-4718213)
[»] chr1 (29 HSPs)
chr1 (1-197)||(2824371-2824566)
chr1 (1-197)||(28413223-28413419)
chr1 (1-197)||(38672327-38672523)
chr1 (1-197)||(39806533-39806729)
chr1 (1-197)||(23251828-23252024)
chr1 (1-196)||(5357298-5357493)
chr1 (5-197)||(45619694-45619886)
chr1 (10-197)||(13432334-13432522)
chr1 (1-122)||(1115606-1115728)
chr1 (1-122)||(1175082-1175204)
chr1 (1-122)||(4600005-4600127)
chr1 (1-122)||(23761960-23762082)
chr1 (1-122)||(32798200-32798322)
chr1 (1-122)||(45023011-45023133)
chr1 (1-146)||(31473735-31473880)
chr1 (1-156)||(13249192-13249346)
chr1 (1-122)||(26621946-26622069)
chr1 (1-107)||(31072794-31072901)
chr1 (1-122)||(9869581-9869703)
chr1 (26-122)||(28996510-28996607)
chr1 (26-122)||(29002226-29002323)
chr1 (1-107)||(41305158-41305266)
chr1 (1-122)||(44241833-44241953)
chr1 (1-122)||(11912886-11913008)
chr1 (1-107)||(30660316-30660422)
chr1 (1-122)||(35085482-35085604)
chr1 (1-122)||(39052962-39053084)
chr1 (1-122)||(39059334-39059456)
chr1 (1-122)||(45016257-45016379)
[»] chr2 (24 HSPs)
chr2 (1-197)||(41456082-41456278)
chr2 (1-197)||(36842264-36842460)
chr2 (1-197)||(17863959-17864155)
chr2 (1-189)||(37439092-37439280)
chr2 (1-148)||(24852629-24852773)
chr2 (1-122)||(15853026-15853148)
chr2 (1-122)||(29485371-29485493)
chr2 (1-122)||(42930996-42931118)
chr2 (1-122)||(45012459-45012581)
chr2 (1-122)||(2021072-2021194)
chr2 (1-122)||(21331618-21331740)
chr2 (1-122)||(21341550-21341672)
chr2 (1-122)||(11909576-11909696)
chr2 (1-122)||(43268335-43268458)
chr2 (1-122)||(16816954-16817076)
chr2 (1-122)||(16856111-16856233)
chr2 (1-122)||(36781808-36781930)
chr2 (1-122)||(21067580-21067703)
chr2 (10-148)||(34744888-34745027)
chr2 (1-122)||(2158088-2158210)
chr2 (1-122)||(2164504-2164626)
chr2 (1-122)||(12951272-12951394)
chr2 (1-122)||(13163294-13163414)
chr2 (73-122)||(13901579-13901628)
[»] chr4 (16 HSPs)
chr4 (1-198)||(13003355-13003553)
chr4 (12-197)||(52182717-52182903)
chr4 (1-122)||(13594584-13594706)
chr4 (1-122)||(17457331-17457453)
chr4 (1-122)||(27590781-27590903)
chr4 (1-122)||(30238705-30238827)
chr4 (1-122)||(37355973-37356095)
chr4 (1-122)||(37367939-37368061)
chr4 (1-122)||(7780802-7780925)
chr4 (1-122)||(8104357-8104479)
chr4 (1-122)||(16405822-16405944)
chr4 (1-107)||(49358955-49359060)
chr4 (1-107)||(30211175-30211282)
chr4 (1-122)||(55462396-55462518)
chr4 (1-122)||(5660173-5660295)
chr4 (1-122)||(41373463-41373585)
[»] scaffold0513 (1 HSPs)
scaffold0513 (3-107)||(11771-11877)
[»] scaffold0343 (1 HSPs)
scaffold0343 (1-122)||(3121-3243)
[»] scaffold0510 (1 HSPs)
scaffold0510 (1-122)||(8504-8627)
[»] scaffold0053 (1 HSPs)
scaffold0053 (1-122)||(50166-50288)
[»] scaffold0043 (1 HSPs)
scaffold0043 (1-122)||(4629-4751)


Alignment Details
Target: chr8 (Bit Score: 197; Significance: 1e-107; HSPs: 17)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 1 - 197
Target Start/End: Complemental strand, 7933672 - 7933476
Alignment:
Q  1 agaataacttcaatatcatgtaaattgctagaatcatatattacaagattaaaagattacattctaagctcaatcaagtacctctaatcccaactaaaga 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7933672 agaataacttcaatatcatgtaaattgctagaatcatatattacaagattaaaagattacattctaagctcaatcaagtacctctaatcccaactaaaga 7933573  T
Q  101 gatttagttcatcattgtcatgagaacattacaaaagtggaagaaaagttgagaatccatgcaaggaacttgatttctccaagaatcttgatgaatc 197  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7933572 gatttagttcatcattgtcatgagaacattacaaaagtggaagaaaagttgagaatccatgcaaggaacttgatttctccaagaatcttgatgaatc 7933476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 1 - 196
Target Start/End: Original strand, 14394174 - 14394369
Alignment:
Q  1 agaataacttcaatatcatgtaaattgctagaatcatatattacaagattaaaagattacattctaagctcaatcaagtacctctaatcccaactaaaga 100  Q
    ||||||||||||||||||| |||||||||||||||||||||| |||||| ||| |||||||||||||||| || ||||||||||||||| ||||||| ||    
T  14394174 agaataacttcaatatcatttaaattgctagaatcatatatttcaagatcaaaggattacattctaagcttaaacaagtacctctaatctcaactaagga 14394273  T
Q  101 gatttagttcatcattgtcatgagaacattacaaaagtggaagaaaagttgagaatccatgcaaggaacttgatttctccaagaatcttgatgaat 196  Q
    |||||||||||||||||||||| |||||||||||||||||||| ||||||||||||| |||| | |||||||||||||| ||||||||||||||||    
T  14394274 gatttagttcatcattgtcatgtgaacattacaaaagtggaagcaaagttgagaatctatgccaagaacttgatttctcaaagaatcttgatgaat 14394369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 1 - 197
Target Start/End: Complemental strand, 24220018 - 24219822
Alignment:
Q  1 agaataacttcaatatcatgtaaattgctagaatcatatattacaagattaaaagattacattctaagctcaatcaagtacctctaatcccaactaaaga 100  Q
    ||||||||||||||||||||||||||||||||||||||||||  ||||| ||||| ||||||| | | || |||||||||||||||||||||||||| ||    
T  24220018 agaataacttcaatatcatgtaaattgctagaatcatatattgaaagatcaaaagtttacattatcaacttaatcaagtacctctaatcccaactaagga 24219919  T
Q  101 gatttagttcatcattgtcatgagaacattacaaaagtggaagaaaagttgagaatccatgcaaggaacttgatttctccaagaatcttgatgaatc 197  Q
    |||||||||||| ||||||| |||||||||||||| || |||  |||| |||  ||| |||| | ||||||||||||||||||||||||||||||||    
T  24219918 gatttagttcattattgtcacgagaacattacaaacgtagaaagaaagatgaagatctatgccaagaacttgatttctccaagaatcttgatgaatc 24219822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 29336808 - 29336686
Alignment:
Q  1 agaataacttcaatatcatgtaaattgctagaatcatatattacaagattaaaagattacattctaagctcaatcaagtacctctaatcccaactaaaga 100  Q
    |||||||  ||||||||| ||||| |||||||| ||||||||  ||||| |||||||||||| |||||||  |||||||||||||||||||||| || ||    
T  29336808 agaataatctcaatatcaagtaaaatgctagaaccatatatttgaagatcaaaagattacatactaagcttgatcaagtacctctaatcccaacaaagga 29336709  T
Q  101 gatttagttcatcattgtcatga 123  Q
    || ||||||  ||||||||||||    
T  29336708 gaattagttactcattgtcatga 29336686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 36425476 - 36425354
Alignment:
Q  1 agaataacttcaatatcatgtaaattgctagaatcatatattacaagattaaaagattacattctaagctca-atcaagtacctctaatcccaactaaag 99  Q
    |||||||| |||||||||  | || |||||||| ||||||||   |||| ||||||||||||  |||||| | |||||||||||||||||||||| || |    
T  36425476 agaataacatcaatatcaaatcaaatgctagaaccatatatttatagatcaaaagattacatgttaagctaagatcaagtacctctaatcccaacaaagg 36425377  T
Q  100 agatttagttcatcattgtcatg 122  Q
    |||||||| |  |||||||||||    
T  36425376 agatttagctactcattgtcatg 36425354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 11357939 - 11357832
Alignment:
Q  1 agaataacttcaatatcatgtaaattgctagaatcatatattacaagattaaaagattacattctaagctca-atcaagtacctctaatcccaactaaag 99  Q
    |||||||| |||||||||  | || |||||||| ||||||||   |||| ||||||||||||  |||||| | |||||||||||||||||||||| || |    
T  11357939 agaataacatcaatatcaaatcaaatgctagaaccatatatttatagatcaaaagattacatgttaagctaagatcaagtacctctaatcccaacaaagg 11357840  T
Q  100 agatttag 107  Q
    ||||||||    
T  11357839 agatttag 11357832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 45068162 - 45068055
Alignment:
Q  1 agaataacttcaatatcatgtaaattgctagaatcatatattacaagattaaaagattacattctaagctca-atcaagtacctctaatcccaactaaag 99  Q
    |||||||| |||||||||  | || |||||||| ||||||||   |||| ||||||||||||  | |||| | |||||||||||||||||||||| || |    
T  45068162 agaataacatcaatatcaaatcaaatgctagaaccatatatttatagatcaaaagattacatgtttagctaagatcaagtacctctaatcccaacaaagg 45068063  T
Q  100 agatttag 107  Q
    ||||||||    
T  45068062 agatttag 45068055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 15012864 - 15012986
Alignment:
Q  1 agaataacttcaatatcatgtaaattgctagaatcatatattacaagattaaaagattacattctaagctca-atcaagtacctctaatcccaactaaag 99  Q
    |||||||| ||||||| |  | || |||||||| |||||||| | | || ||||||||||||  ||| || | |||||||||||||||||||||| || |    
T  15012864 agaataacatcaatattaaatcaaatgctagaaccatatatttctatatcaaaagattacatgttaaactaagatcaagtacctctaatcccaacaaagg 15012963  T
Q  100 agatttagttcatcattgtcatg 122  Q
    |||||||| |  |||||||||||    
T  15012964 agatttagctactcattgtcatg 15012986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 1238690 - 1238797
Alignment:
Q  1 agaataacttcaatatcatgtaaattgctagaatcatatattacaagattaaaagattacat-tctaagctca-atcaagtacctctaatcccaactaaa 98  Q
    |||||||| |||||| ||  | || |||||||| ||||||||   |||| |||||||||||| | |||||| | |||||||||||||||||||||| ||     
T  1238690 agaataacatcaataacaaatcaaatgctagaaccatatatttatagatcaaaagattacatgtttaagctaagatcaagtacctctaatcccaacaaag 1238789  T
Q  99 gagattta 106  Q
    ||||||||    
T  1238790 gagattta 1238797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 6464322 - 6464200
Alignment:
Q  1 agaataacttcaatatcatgtaaattgctagaatcatatattacaagattaaaagattacattctaagctca-atcaagtacctctaatcccaactaaag 99  Q
    |||||||| |||||||||  | || |||||||| ||||||||   |||| ||| ||||||||  ||| ||   |||||||||||||||||||||| || |    
T  6464322 agaataacctcaatatcaattcaaatgctagaaccatatatttatagatcaaacgattacatgttaaactatgatcaagtacctctaatcccaacaaagg 6464223  T
Q  100 agatttagttcatcattgtcatg 122  Q
    |||||||| |  |||||||||||    
T  6464222 agatttagctactcattgtcatg 6464200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 7311825 - 7311947
Alignment:
Q  1 agaataacttcaatatcatgtaaattgctagaatcatatattacaagattaaaagattacattctaagctca-atcaagtacctctaatcccaactaaag 99  Q
    |||||||| |||||||||  | || |||||||| ||||||||   |||| ||| ||||||||  ||| ||   |||||||||||||||||||||| || |    
T  7311825 agaataacctcaatatcaattcaaatgctagaaccatatatttatagatcaaacgattacatgttaaactatgatcaagtacctctaatcccaacaaagg 7311924  T
Q  100 agatttagttcatcattgtcatg 122  Q
    |||||||| |  |||||||||||    
T  7311925 agatttagctactcattgtcatg 7311947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 8013066 - 8012944
Alignment:
Q  1 agaataacttcaatatcatgtaaattgctagaatcatatattacaagattaaaagattacattctaagctca-atcaagtacctctaatcccaactaaag 99  Q
    |||||||| |||||||||  | || |||||||| ||||||||   |||| ||| ||||||||  ||| ||   |||||||||||||||||||||| || |    
T  8013066 agaataacctcaatatcaattcaaatgctagaaccatatatttatagatcaaacgattacatgttaaactatgatcaagtacctctaatcccaacaaagg 8012967  T
Q  100 agatttagttcatcattgtcatg 122  Q
    |||||||| |  |||||||||||    
T  8012966 agatttagctactcattgtcatg 8012944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 122
Target Start/End: Complemental strand, 26250310 - 26250216
Alignment:
Q  29 tagaatcatatattacaagattaaaagattacattctaagctca-atcaagtacctctaatcccaactaaagagatttagttcatcattgtcatg 122  Q
    ||||| ||||||||   |||| ||||||||||||  | |||| | |||||||||||||||||||||| || ||||||||| |  |||||||||||    
T  26250310 tagaaccatatatttatagatcaaaagattacatgtttagctaagatcaagtacctctaatcccaacaaaggagatttagctactcattgtcatg 26250216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 36005228 - 36005106
Alignment:
Q  1 agaataacttcaatatcatgtaaattgctagaatcatatattacaagattaaaagattacattctaagctca-atcaagtacctctaatcccaactaaag 99  Q
    |||||||| |||||||||  | || |||||||| ||||||||   |||| ||| ||||||||  ||| ||   |||||||||||||||||||||| || |    
T  36005228 agaataacctcaatatcaattcaaatgctagaaccatatatttatagatcaaacgattacatgttaaactatgatcaagtacctctaatcccaacaaagg 36005129  T
Q  100 agatttagttcatcattgtcatg 122  Q
    |||||||| |  |||||||||||    
T  36005128 agatttagctactcattgtcatg 36005106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 36076443 - 36076565
Alignment:
Q  1 agaataacttcaatatcatgtaaattgctagaatcatatattacaagattaaaagattacattctaagctca-atcaagtacctctaatcccaactaaag 99  Q
    |||||||| |||||||||  | || |||||||| ||||||||   |||| ||| ||||||||  ||| ||   |||||||||||||||||||||| || |    
T  36076443 agaataacctcaatatcaattcaaatgctagaaccatatatttatagatcaaacgattacatgttaaactatgatcaagtacctctaatcccaacaaagg 36076542  T
Q  100 agatttagttcatcattgtcatg 122  Q
    |||||||| |  |||||||||||    
T  36076543 agatttagctactcattgtcatg 36076565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 21 - 62
Target Start/End: Complemental strand, 3299011 - 3298970
Alignment:
Q  21 taaattgctagaatcatatattacaagattaaaagattacat 62  Q
    ||||||||||||| ||||||||| ||||| ||||||||||||    
T  3299011 taaattgctagaaccatatattaaaagatcaaaagattacat 3298970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 73 - 122
Target Start/End: Complemental strand, 36021471 - 36021422
Alignment:
Q  73 atcaagtacctctaatcccaactaaagagatttagttcatcattgtcatg 122  Q
    |||||||||||||||||||||| || ||||||||| |  |||||||||||    
T  36021471 atcaagtacctctaatcccaacaaaggagatttagctactcattgtcatg 36021422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 197; Significance: 1e-107; HSPs: 23)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 1 - 197
Target Start/End: Original strand, 4591271 - 4591467
Alignment:
Q  1 agaataacttcaatatcatgtaaattgctagaatcatatattacaagattaaaagattacattctaagctcaatcaagtacctctaatcccaactaaaga 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4591271 agaataacttcaatatcatgtaaattgctagaatcatatattacaagattaaaagattacattctaagctcaatcaagtacctctaatcccaactaaaga 4591370  T
Q  101 gatttagttcatcattgtcatgagaacattacaaaagtggaagaaaagttgagaatccatgcaaggaacttgatttctccaagaatcttgatgaatc 197  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4591371 gatttagttcatcattgtcatgagaacattacaaaagtggaagaaaagttgagaatccatgcaaggaacttgatttctccaagaatcttgatgaatc 4591467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 7 - 197
Target Start/End: Complemental strand, 20949930 - 20949739
Alignment:
Q  7 acttcaatatcatgtaaattgctagaatcatatattacaa-gattaaaagattacattctaagctcaatcaagtacctctaatcccaactaaagagattt 105  Q
    |||||||||||||||||||||||||||||||||| ||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  20949930 acttcaatatcatgtaaattgctagaatcatataatacaaagatcaaaagattacattctaagctcaatcaagtacctctaatcccaactaaggagattt 20949831  T
Q  106 agttcatcattgtcatgagaacattacaaaagtggaagaaaagttgagaatccatgcaaggaacttgatttctccaagaatcttgatgaatc 197  Q
    |||||||||||||||||||||| ||||||||||||||  |||||||||| ||||||| | ||||||||||||||||||||||||||||||||    
T  20949830 agttcatcattgtcatgagaactttacaaaagtggaatgaaagttgagactccatgccaagaacttgatttctccaagaatcttgatgaatc 20949739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 1 - 197
Target Start/End: Complemental strand, 4644208 - 4644012
Alignment:
Q  1 agaataacttcaatatcatgtaaattgctagaatcatatattacaagattaaaagattacattctaagctcaatcaagtacctctaatcccaactaaaga 100  Q
    ||||||||||||||||||||||||||||||||||||||||||  ||||| ||||| ||||||| | | || ||||||||||||||||||||||| || ||    
T  4644208 agaataacttcaatatcatgtaaattgctagaatcatatattgaaagatcaaaagtttacattatcaacttaatcaagtacctctaatcccaacaaagga 4644109  T
Q  101 gatttagttcatcattgtcatgagaacattacaaaagtggaagaaaagttgagaatccatgcaaggaacttgatttctccaagaatcttgatgaatc 197  Q
    ||||| |||||||| |||||||||||||||||||||||||||  ||| ||||  |||||||| | |||||||||||||||||||||||||| |||||    
T  4644108 gattttgttcatcactgtcatgagaacattacaaaagtggaaagaaatttgaagatccatgccaagaacttgatttctccaagaatcttgacgaatc 4644012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 1 - 197
Target Start/End: Original strand, 25692456 - 25692653
Alignment:
Q  1 agaataacttcaatatcatgtaaattgctagaatcatatatt-acaagattaaaagattacattctaagctcaatcaagtacctctaatcccaactaaag 99  Q
    |||||||  |||||||| |||||||||||||||||||||||| | ||||| |||||||||||||||||| |  |||||||||||||||||||||||||      
T  25692456 agaataaactcaatatcttgtaaattgctagaatcatatattcaaaagatcaaaagattacattctaagtttgatcaagtacctctaatcccaactaaga 25692555  T
Q  100 agatttagttcatcattgtcatgagaacattacaaaagtggaagaaaagttgagaatccatgcaaggaacttgatttctccaagaatcttgatgaatc 197  Q
    |||||||||| ||||||||||||| |||||||||||||||||||||||| |||  |||||||| | || ||||||||||| |||  ||||||||||||    
T  25692556 agatttagttgatcattgtcatgataacattacaaaagtggaagaaaagatgaagatccatgctaagagcttgatttctcaaagtttcttgatgaatc 25692653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 197
Target Start/End: Original strand, 17735819 - 17736015
Alignment:
Q  1 agaataacttcaatatcatgtaaattgctagaatcatatattaca-agattaaaagattacattctaagctcaatcaagtacctctaatcccaactaaag 99  Q
    |||||||  |||||||||  ||||||||||||||||||||||  | | || |||||||||||| |||||||  |||||||||||||||||||||| || |    
T  17735819 agaataaactcaatatcacataaattgctagaatcatatatttgagatatcaaaagattacat-ctaagcttgatcaagtacctctaatcccaacaaagg 17735917  T
Q  100 agatttagttcatcattgtcatgagaacattacaaaagtggaagaaaagttgagaatccatgcaaggaacttgatttctccaagaatcttgatgaatc 197  Q
    |||||||||| ||||||||||||||||||||||||   |||||||||   |||  || ||||| | || ||||||||||| |||  ||||||||||||    
T  17735918 agatttagttgatcattgtcatgagaacattacaatcatggaagaaataatgaagattcatgctaagatcttgatttctcaaagtttcttgatgaatc 17736015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 197
Target Start/End: Original strand, 19037088 - 19037284
Alignment:
Q  1 agaataacttcaatatcatgtaaattgctagaatcatatattaca-agattaaaagattacattctaagctcaatcaagtacctctaatcccaactaaag 99  Q
    |||||||  |||||||||  ||||||||||||||||||||||  | | || |||||||||||| |||||||  |||||||||||||||||||||| || |    
T  19037088 agaataaactcaatatcacataaattgctagaatcatatatttgagatatcaaaagattacat-ctaagcttgatcaagtacctctaatcccaacaaagg 19037186  T
Q  100 agatttagttcatcattgtcatgagaacattacaaaagtggaagaaaagttgagaatccatgcaaggaacttgatttctccaagaatcttgatgaatc 197  Q
    |||||||||| ||||||||||||||||||||||||   |||||||||   |||  || ||||| | || ||||||||||| |||  ||||||||||||    
T  19037187 agatttagttgatcattgtcatgagaacattacaatcatggaagaaataatgaagattcatgctaagatcttgatttctcaaagtttcttgatgaatc 19037284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 21 - 142
Target Start/End: Original strand, 24705306 - 24705432
Alignment:
Q  21 taaattgctagaatcatatattacaagattaaaagattacattctaagctcaatcaagtacctctaatcccaac----taaa-gagatttagttcatcat 115  Q
    ||||||||||||||||||||||  ||||| |||||||||||||||||||| |||||||||||| ||||||||||    |||| ||| ||||||| |||||    
T  24705306 taaattgctagaatcatatattcaaagatcaaaagattacattctaagcttaatcaagtacctataatcccaacaaattaaaggaggtttagttgatcat 24705405  T
Q  116 tgtcatgagaacattacaaaagtggaa 142  Q
    |||||||| ||||||||| ||||||||    
T  24705406 tgtcatgataacattacagaagtggaa 24705432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 197
Target Start/End: Complemental strand, 461176 - 460980
Alignment:
Q  1 agaataacttcaatatcatgtaaattgctagaatcatatattacaa-gattaaaagattacattctaagctcaatcaagtacctctaatcccaactaaag 99  Q
    |||||||  |||||||||  |||| |||||||||| | |||| ||| ||| |||||||||||| |||||||  |||||||||||||||||||| | ||      
T  461176 agaataaactcaatatcacataaaatgctagaatcgtctatttcaaagatcaaaagattacat-ctaagcttgatcaagtacctctaatcccagcaaaga 461078  T
Q  100 agatttagttcatcattgtcatgagaacattacaaaagtggaagaaaagttgagaatccatgcaaggaacttgatttctccaagaatcttgatgaatc 197  Q
    |||||||||| ||||||||||||| |||||| ||| | || |||||| | |||  || ||||| | ||  |||||||||| |||  ||||||||||||    
T  461077 agatttagttgatcattgtcatgacaacattgcaataatgaaagaaatgatgaagattcatgctaagatattgatttctcaaagtttcttgatgaatc 460980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 10941050 - 10940928
Alignment:
Q  1 agaataacttcaatatcatgtaaattgctagaatcatatattacaagattaaaagattacattctaagctca-atcaagtacctctaatcccaactaaag 99  Q
    |||||||| |||||||||  | || |||||||| ||||||||   |||| ||||||||||||  |||||| | |||||||||||||||||||||| || |    
T  10941050 agaataacatcaatatcaaatcaaatgctagaaccatatatttatagatcaaaagattacatgttaagctaagatcaagtacctctaatcccaacaaatg 10940951  T
Q  100 agatttagttcatcattgtcatg 122  Q
    |||||||| |  |||||||||||    
T  10940950 agatttagctactcattgtcatg 10940928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 27501713 - 27501591
Alignment:
Q  1 agaataacttcaatatcatgtaaattgctagaatcatatattacaagattaaaagattacattctaagctca-atcaagtacctctaatcccaactaaag 99  Q
    |||||||| |||||||||  | || |||||||| ||||||||   |||| ||||||||||||  |||||| | |||||||||||||||||||||| || |    
T  27501713 agaataacatcaatatcaaatcaaatgctagaaccatatatttatagatcaaaagattacatgttaagctaagatcaagtacctctaatcccaacaaagg 27501614  T
Q  100 agatttagttcatcattgtcatg 122  Q
    |||||||| |  |||||||||||    
T  27501613 agatttagctactcattgtcatg 27501591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 2786180 - 2786302
Alignment:
Q  1 agaataacttcaatatcatgtaaattgctagaatcatatattacaagattaaaagattacattctaagctca-atcaagtacctctaatcccaactaaag 99  Q
    |||||||| |||||||||  | || |||||||||||||||||| | ||||||||||||||||  | |||| | |||||||||||||||||||||| |  |    
T  2786180 agaataacctcaatatcaaatcaaatgctagaatcatatatta-aggattaaaagattacatgtttagcttagatcaagtacctctaatcccaacaatgg 2786278  T
Q  100 agatttagttcatcattgtcatga 123  Q
    | |||||| |  ||||||||||||    
T  2786279 aaatttagctactcattgtcatga 2786302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 4311232 - 4311110
Alignment:
Q  1 agaataacttcaatatcatgtaaattgctagaatcatatattacaagattaaaagattacattctaagctca-atcaagtacctctaatcccaactaaag 99  Q
    |||||||| |||||||||  | || |||||||| ||||||||   |||| ||||||||||||  ||||||   |||||||||||||||||||||| || |    
T  4311232 agaataacatcaatatcaaatcaaatgctagaaccatatatttatagatcaaaagattacatgttaagctaggatcaagtacctctaatcccaacaaagg 4311133  T
Q  100 agatttagttcatcattgtcatg 122  Q
    |||||||| |  |||||||||||    
T  4311132 agatttagctactcattgtcatg 4311110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 6036742 - 6036864
Alignment:
Q  1 agaataacttcaatatcatgtaaattgctagaatcatatattacaagattaaaagattacattctaagctca-atcaagtacctctaatcccaactaaag 99  Q
    |||||||| |||||||||  | || |||||||| ||||||||   |||| ||||||||||||  |||||| | ||||||||||||||||||||||  | |    
T  6036742 agaataacatcaatatcaaatcaaatgctagaaccatatatttatagatcaaaagattacatgttaagctaagatcaagtacctctaatcccaacagagg 6036841  T
Q  100 agatttagttcatcattgtcatg 122  Q
    |||||||| |  |||||||||||    
T  6036842 agatttagctactcattgtcatg 6036864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 24179550 - 24179672
Alignment:
Q  1 agaataacttcaatatcatgtaaattgctagaatcatatattacaagattaaaagattacattctaagctca-atcaagtacctctaatcccaactaaag 99  Q
    |||||||| |||||||||  | || |||||||| ||||||||   |||| ||||||||||||  |||||| | |||||||||| ||||||||||| || |    
T  24179550 agaataacatcaatatcaaatcaaatgctagaaccatatatttatagatcaaaagattacatgttaagctaagatcaagtacccctaatcccaacaaagg 24179649  T
Q  100 agatttagttcatcattgtcatg 122  Q
    |||||||| |  |||||||||||    
T  24179650 agatttagctactcattgtcatg 24179672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 32746846 - 32746968
Alignment:
Q  1 agaataacttcaatatcatgtaaattgctagaatcatatattacaagattaaaagattacattctaagctca-atcaagtacctctaatcccaactaaag 99  Q
    |||||||| |||||||||  | || |||||||| ||||||||   |||| ||||||||||||  |||||| | |||||||||||||||||||||| || |    
T  32746846 agaataacatcaatatcaaatcaaatgctagaaccatatatttatagatcaaaagattacatgttaagctaagatcaagtacctctaatcccaacaaagg 32746945  T
Q  100 agatttagttcatcattgtcatg 122  Q
    |||||||  |  |||||||||||    
T  32746946 agatttaactactcattgtcatg 32746968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 43932053 - 43932175
Alignment:
Q  1 agaataacttcaatatcatgtaaattgctagaatcatatattacaagattaaaagattacattctaagctca-atcaagtacctctaatcccaactaaag 99  Q
    |||||||| |||||||||  | || |||||||| ||||||||   |||| ||||||||||||  |||||| | || ||||||||||||||||||| || |    
T  43932053 agaataacatcaatatcaaatcaaatgctagaaccatatatttatagatcaaaagattacatgttaagctaagattaagtacctctaatcccaacaaagg 43932152  T
Q  100 agatttagttcatcattgtcatg 122  Q
    |||||||| |  |||||||||||    
T  43932153 agatttagctactcattgtcatg 43932175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 122
Target Start/End: Original strand, 25893729 - 25893824
Alignment:
Q  28 ctagaatcatatattacaagattaaaagattacattctaagctca-atcaagtacctctaatcccaactaaagagatttagttcatcattgtcatg 122  Q
    |||||| ||||||||   |||| ||||||||||||  |||||| | |||||||||||||||||||||| || ||||||||| |  |||||||||||    
T  25893729 ctagaaccatatatttatagatcaaaagattacatgttaagctaagatcaagtacctctaatcccaacaaaggagatttagctactcattgtcatg 25893824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 23068940 - 23069062
Alignment:
Q  1 agaataacttcaatatcatgtaaattgctagaatcatatattacaagattaaaagattacattctaagctca-atcaagtacctctaatcccaactaaag 99  Q
    |||||||| |||||||||  | || |||||||| ||||||||   |||| ||||||||||||  ||||||   |||||||||||||||||||||| || |    
T  23068940 agaataacatcaatatcaattcaaatgctagaaccatatatttatagatcaaaagattacatgttaagctatgatcaagtacctctaatcccaacaaagg 23069039  T
Q  100 agatttagttcatcattgtcatg 122  Q
    |||||||  |  |||||||||||    
T  23069040 agatttatctactcattgtcatg 23069062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 43995553 - 43995674
Alignment:
Q  1 agaataacttcaatatcatgtaaattgctagaatcatatattacaagattaaaagattacattctaagctca-atcaagtacctctaatcccaactaaag 99  Q
    |||||||| |||||||||  | || |||||||| ||||||||   |||| ||||||||||||  || ||| | |||||||||||||||||||||| || |    
T  43995553 agaataacatcaatatcaaatcaaatgctagaaccatatatttatagatcaaaagattacatgtta-gctaagatcaagtacctctaatcccaacaaagg 43995651  T
Q  100 agatttagttcatcattgtcatg 122  Q
    |||||||| |  |||||||||||    
T  43995652 agatttagctactcattgtcatg 43995674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 20650871 - 20650764
Alignment:
Q  1 agaataacttcaatatcatgtaaattgctagaatcatatattacaagattaaaagattacattctaagctca-atcaagtacctctaatcccaactaaag 99  Q
    |||||||  |||||||||  | || |||||||||||||||||   |||| ||||||||||||  | |||| | |||||||||||||||||| ||| || |    
T  20650871 agaataatctcaatatcaaatcaaatgctagaatcatatatttatagatcaaaagattacatgtttagctaagatcaagtacctctaatcctaacaaagg 20650772  T
Q  100 agatttag 107  Q
    ||||||||    
T  20650771 agatttag 20650764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 73 - 122
Target Start/End: Complemental strand, 9570220 - 9570171
Alignment:
Q  73 atcaagtacctctaatcccaactaaagagatttagttcatcattgtcatg 122  Q
    |||||||||||||||||||||| || ||||||||| |  |||||||||||    
T  9570220 atcaagtacctctaatcccaacaaaggagatttagctactcattgtcatg 9570171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 73 - 122
Target Start/End: Complemental strand, 9576722 - 9576673
Alignment:
Q  73 atcaagtacctctaatcccaactaaagagatttagttcatcattgtcatg 122  Q
    |||||||||||||||||||||| || ||||||||| |  |||||||||||    
T  9576722 atcaagtacctctaatcccaacaaaggagatttagctactcattgtcatg 9576673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 21 - 62
Target Start/End: Complemental strand, 9989605 - 9989564
Alignment:
Q  21 taaattgctagaatcatatattacaagattaaaagattacat 62  Q
    ||||||||||||| ||||||||| ||||| ||||||||||||    
T  9989605 taaattgctagaaccatatattaaaagatcaaaagattacat 9989564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 193; Significance: 1e-105; HSPs: 27)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 1 - 197
Target Start/End: Original strand, 9843825 - 9844021
Alignment:
Q  1 agaataacttcaatatcatgtaaattgctagaatcatatattacaagattaaaagattacattctaagctcaatcaagtacctctaatcccaactaaaga 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  9843825 agaataacttcaatatcatgtaaattgctagaatcatatattacaagattaaaagattacattctaagctcaatcaagtacctctaatcccaactacaga 9843924  T
Q  101 gatttagttcatcattgtcatgagaacattacaaaagtggaagaaaagttgagaatccatgcaaggaacttgatttctccaagaatcttgatgaatc 197  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9843925 gatttagttcatcattgtcatgagaacattacaaaagtggaagaaaagttgagaatccatgcaaggaacttgatttctccaagaatcttgatgaatc 9844021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 169; E-Value: 8e-91
Query Start/End: Original strand, 1 - 197
Target Start/End: Complemental strand, 2155866 - 2155671
Alignment:
Q  1 agaataacttcaatatcatgtaaattgctagaatcatatattacaagattaaaagattacattctaagctcaatcaagtacctctaatcccaactaaaga 100  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||    
T  2155866 agaataactttaatatcatgtaaattgctagaatcatatattacaagattaaaatattacattctaagctcaatcaagtacctctaatcccaactaagga 2155767  T
Q  101 gatttagttcatcattgtcatgagaacattacaaaagtggaagaaaagttgagaatccatgcaaggaacttgatttctccaagaatcttgatgaatc 197  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| ||||||||||||||||||||||||||||||    
T  2155766 gatttagttcatcattgtcatgagaacattacaaaagtggaaggaaaattgagaatccatgcaagg-acttgatttctccaagaatcttgatgaatc 2155671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 1 - 197
Target Start/End: Complemental strand, 3413036 - 3412840
Alignment:
Q  1 agaataacttcaatatcatgtaaattgctagaatcatatattacaagattaaaagattacattctaagctcaatcaagtacctctaatcccaactaaaga 100  Q
    ||||||||||||||||||||||||||||||||||||||||||  ||||| ||||| ||||||| | | || |||||||||||||||||||||||||| ||    
T  3413036 agaataacttcaatatcatgtaaattgctagaatcatatattgaaagatcaaaagtttacattatcaacttaatcaagtacctctaatcccaactaagga 3412937  T
Q  101 gatttagttcatcattgtcatgagaacattacaaaagtggaagaaaagttgagaatccatgcaaggaacttgatttctccaagaatcttgatgaatc 197  Q
    ||||||||||||||||||||||||||||||||||||||||||  |||| |||  |||||||  | ||||||||||||||||||||||||||||||||    
T  3412936 gatttagttcatcattgtcatgagaacattacaaaagtggaaagaaagatgaagatccatggcaagaacttgatttctccaagaatcttgatgaatc 3412840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 125; E-Value: 1e-64
Query Start/End: Original strand, 1 - 197
Target Start/End: Complemental strand, 12918696 - 12918500
Alignment:
Q  1 agaataacttcaatatcatgtaaattgctagaatcatatattacaagattaaaagattacattctaagctcaatcaagtacctctaatcccaactaaaga 100  Q
    ||||||||||||||||||||||||||| ||||||||||||||  ||||| ||||| ||||||| | | || |||||||||||||||||||||||||| ||    
T  12918696 agaataacttcaatatcatgtaaattgttagaatcatatattgaaagatcaaaagtttacattatcaacttaatcaagtacctctaatcccaactaagga 12918597  T
Q  101 gatttagttcatcattgtcatgagaacattacaaaagtggaagaaaagttgagaatccatgcaaggaacttgatttctccaagaatcttgatgaatc 197  Q
    ||||||||||||||||||||||||||||||||||||||||||  |||| |||  |||||||| | ||||||||||||| ||||||||||||||||||    
T  12918596 gatttagttcatcattgtcatgagaacattacaaaagtggaaagaaagatgaagatccatgccaagaacttgatttcttcaagaatcttgatgaatc 12918500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 1 - 197
Target Start/End: Complemental strand, 19853274 - 19853078
Alignment:
Q  1 agaataacttcaatatcatgtaaattgctagaatcatatattacaagattaaaagattacattctaagctcaatcaagtacctctaatcccaactaaaga 100  Q
    ||||||||||||||| |||||||||||||||||| |||||||||||||| |||||||||||||||||||| ||||||||| |||||||||||||||| ||    
T  19853274 agaataacttcaataccatgtaaattgctagaataatatattacaagatcaaaagattacattctaagcttaatcaagtatctctaatcccaactaagga 19853175  T
Q  101 gatttagttcatcattgtcatgagaacattacaaaagtggaagaaaagttgagaatccatgcaaggaacttgatttctccaagaatcttgatgaatc 197  Q
    ||||||||||||||||||||||||||   |||||||||||||| |||| |||  |||||||| | ||  |||||||||| |  ||||||||||||||    
T  19853174 gatttagttcatcattgtcatgagaaacatacaaaagtggaaggaaagatgaagatccatgctaagagattgatttctcaacaaatcttgatgaatc 19853078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 30579936 - 30579796
Alignment:
Q  1 agaataacttcaatatcatgtaaattgctagaatcatatatta-caagattaaaagattacattctaagctcaatcaagtacctctaatcccaactaaag 99  Q
    |||||| | |||||||||||||||||||||||||||||||||  |||||| ||||||||||||| | | || ||| ||||||||||||||| |||||| |    
T  30579936 agaatatcatcaatatcatgtaaattgctagaatcatatatttgcaagatcaaaagattacattatcaacttaataaagtacctctaatccaaactaagg 30579837  T
Q  100 agatttagttcatcattgtcatgagaacattacaaaagtgg 140  Q
    ||||||| |||||||||||| ||||||||||||||||||||    
T  30579836 agatttaattcatcattgtcttgagaacattacaaaagtgg 30579796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 12 - 134
Target Start/End: Original strand, 34738626 - 34738748
Alignment:
Q  12 aatatcatgtaaattgctagaatcatatattacaa-gattaaaagattacattctaagctcaatcaagtacctctaatcccaactaaagagatttagttc 110  Q
    |||||||  ||||||||||||||||||||||  || ||| |||||||||||| |||||||  |||||||||||||||||||||| || |||||||||||     
T  34738626 aatatcacataaattgctagaatcatatatttgaaagatcaaaagattacat-ctaagcttgatcaagtacctctaatcccaacaaaggagatttagttg 34738724  T
Q  111 atcattgtcatgagaacattacaa 134  Q
    ||||||||||||| ||||||||||    
T  34738725 atcattgtcatgacaacattacaa 34738748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 194
Target Start/End: Original strand, 42747561 - 42747754
Alignment:
Q  1 agaataacttcaatatcatgtaaattgctagaatcatatattacaagattaaaagattacattctaagctcaatcaagtacctctaatcccaactaaaga 100  Q
    |||||||  |||||||||  ||||  ||||||||||||||||  ||||| |||||||||||| ||| |||  ||||||||| |||||||||||| || ||    
T  42747561 agaataatctcaatatcaaataaagagctagaatcatatattcaaagatcaaaagattacatactaggcttgatcaagtacgtctaatcccaacaaagga 42747660  T
Q  101 gatttagttcatcattgtcatgagaacattacaaaagtggaagaaaagttgagaatccatgcaaggaacttgatttctccaagaatcttgatga 194  Q
    ||||||| |  ||||| |||||  | | |||||||| ||||||||| | |||  || ||||| | || ||||||||||| || | |||||||||    
T  42747661 gatttagctactcattctcatggtagctttacaaaaatggaagaaatgatgaagattcatgctaagatcttgatttctcaaacattcttgatga 42747754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 2958335 - 2958457
Alignment:
Q  1 agaataacttcaatatcatgtaaattgctagaatcatatattacaagattaaaagattacattctaagctca-atcaagtacctctaatcccaactaaag 99  Q
    |||||||| |||||||||  | || |||||||| ||||||||   |||| ||||||||||||  |||||| | |||||||||||||||||||||| || |    
T  2958335 agaataacatcaatatcaaatcaaatgctagaaccatatatttatagatcaaaagattacatgttaagctaagatcaagtacctctaatcccaacaaagg 2958434  T
Q  100 agatttagttcatcattgtcatg 122  Q
    |||||||| |  |||||||||||    
T  2958435 agatttagctactcattgtcatg 2958457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 2966804 - 2966926
Alignment:
Q  1 agaataacttcaatatcatgtaaattgctagaatcatatattacaagattaaaagattacattctaagctca-atcaagtacctctaatcccaactaaag 99  Q
    |||||||| |||||||||  | || |||||||| ||||||||   |||| ||||||||||||  |||||| | |||||||||||||||||||||| || |    
T  2966804 agaataacatcaatatcaaatcaaatgctagaaccatatatttatagatcaaaagattacatgttaagctaagatcaagtacctctaatcccaacaaagg 2966903  T
Q  100 agatttagttcatcattgtcatg 122  Q
    |||||||| |  |||||||||||    
T  2966904 agatttagctactcattgtcatg 2966926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 4974039 - 4974161
Alignment:
Q  1 agaataacttcaatatcatgtaaattgctagaatcatatattacaagattaaaagattacattctaagctca-atcaagtacctctaatcccaactaaag 99  Q
    |||||||| |||||||||  | || |||||||| ||||||||   |||| ||||||||||||  |||||| | |||||||||||||||||||||| || |    
T  4974039 agaataacatcaatatcaaatcaaatgctagaaccatatatttgtagatcaaaagattacatgttaagctaagatcaagtacctctaatcccaacaaagg 4974138  T
Q  100 agatttagttcatcattgtcatg 122  Q
    |||||||| |  |||||||||||    
T  4974139 agatttagctactcattgtcatg 4974161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 25894395 - 25894273
Alignment:
Q  1 agaataacttcaatatcatgtaaattgctagaatcatatattacaagattaaaagattacattctaagctca-atcaagtacctctaatcccaactaaag 99  Q
    |||||||| |||||||||  | || |||||||| ||||||||   |||| ||||||||||||  |||||| | |||||||||||||||||||||| || |    
T  25894395 agaataacatcaatatcaaatcaaatgctagaaccatatatttatagatcaaaagattacatgttaagctaagatcaagtacctctaatcccaacaaagg 25894296  T
Q  100 agatttagttcatcattgtcatg 122  Q
    |||||||| |  |||||||||||    
T  25894295 agatttagctactcattgtcatg 25894273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 40958363 - 40958256
Alignment:
Q  1 agaataacttcaatatcatgtaaattgctagaatcatatattacaagattaaaagattacattctaagctca-atcaagtacctctaatcccaactaaag 99  Q
    |||||||| |||||||||  | || |||||||| ||||||||   |||| ||||||||||||  |||||| | |||||||||||||||||||||| || |    
T  40958363 agaataacatcaatatcaaatcaaatgctagaaccatatatttatagatcaaaagattacatgttaagctaagatcaagtacctctaatcccaacaaagg 40958264  T
Q  100 agatttag 107  Q
    ||||||||    
T  40958263 agatttag 40958256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 42151295 - 42151417
Alignment:
Q  1 agaataacttcaatatcatgtaaattgctagaatcatatattacaagattaaaagattacattctaagctca-atcaagtacctctaatcccaactaaag 99  Q
    |||||||| |||||||||  | || |||||||| ||||||||   |||| ||||||||||||  |||||| | |||||||||||||||||||||  || |    
T  42151295 agaataacatcaatatcaaatcaaatgctagaaccatatatttatagatcaaaagattacatgttaagctaagatcaagtacctctaatcccaatgaagg 42151394  T
Q  100 agatttagttcatcattgtcatg 122  Q
    |||||||| |  |||||||||||    
T  42151395 agatttagctactcattgtcatg 42151417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 2439277 - 2439384
Alignment:
Q  1 agaataacttcaatatcatgtaaattgctagaatcatatattacaagattaaaagattacattctaagctca-atcaagtacctctaatcccaactaaag 99  Q
    |||||||| |||||||||  | || || ||||| ||||||||   |||||||||||||||||  |||||| | |||||||||||||||||| ||| || |    
T  2439277 agaataacatcaatatcaaatcaaatgttagaaccatatatttatagattaaaagattacatgttaagctaagatcaagtacctctaatccgaacaaagg 2439376  T
Q  100 agatttag 107  Q
    ||||||||    
T  2439377 agatttag 2439384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 26 - 122
Target Start/End: Complemental strand, 12505486 - 12505389
Alignment:
Q  26 tgctagaatcatatattacaagattaaaagattacattctaagctca-atcaagtacctctaatcccaactaaagagatttagttcatcattgtcatg 122  Q
    |||||||| |||||||||  |||| ||||||||||||  | |||| | |||||||||||||||||||||| |  ||||||||| |  |||||||||||    
T  12505486 tgctagaaccatatattaatagatcaaaagattacatgtttagctaagatcaagtacctctaatcccaacaatggagatttagctactcattgtcatg 12505389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 125 - 197
Target Start/End: Original strand, 3664176 - 3664248
Alignment:
Q  125 aacattacaaaagtggaagaaaagttgagaatccatgcaaggaacttgatttctccaagaatcttgatgaatc 197  Q
    |||| ||||||||||||||||||| |||  |||||||| | |||||||||||| | |||  ||||||||||||    
T  3664176 aacaatacaaaagtggaagaaaagatgaagatccatgctaagaacttgatttcccaaagtttcttgatgaatc 3664248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 5876694 - 5876801
Alignment:
Q  1 agaataacttcaatatcatgtaaattgctagaatcatatattacaagattaaaagattacattctaagctca-atcaagtacctctaatcccaactaaag 99  Q
    |||||||| |||||||||  | || |||||||| ||||||||   |||| ||||| ||||||  ||||||   |||||||||||||||||||||| || |    
T  5876694 agaataacatcaatatcaaatcaaatgctagaaccatatatttatagatcaaaagtttacatgttaagctaggatcaagtacctctaatcccaacaaagg 5876793  T
Q  100 agatttag 107  Q
    ||||||||    
T  5876794 agatttag 5876801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 29414415 - 29414292
Alignment:
Q  1 agaataacttcaatatcatgtaaattgctagaatcatatattacaagattaaaagattacat-tctaagctca-atcaagtacctctaatcccaactaaa 98  Q
    |||||||| |||||||||  | || || ||||| ||||||||   |||| |||||||||||| | |||||| | |||||||||||||||||||||| ||     
T  29414415 agaataacatcaatatcaaatcaaatgttagaaccatatatttatagatcaaaagattacatgtttaagctaagatcaagtacctctaatcccaacaaag 29414316  T
Q  99 gagatttagttcatcattgtcatg 122  Q
    || |||||| |  |||||||||||    
T  29414315 gaaatttagctactcattgtcatg 29414292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 22360440 - 22360562
Alignment:
Q  1 agaataacttcaatatcatgtaaattgctagaatcatatattacaagattaaaagattacattctaagctcaa-tcaagtacctctaatcccaactaaag 99  Q
    |||||||| |||||||||  | || ||||| || ||||||||   |||| ||||||||||||  |||| | |  ||||||||||||||||||||| || |    
T  22360440 agaataacatcaatatcaaatcaaatgctataaccatatatttatagatcaaaagattacatgttaagttaaggtcaagtacctctaatcccaacaaagg 22360539  T
Q  100 agatttagttcatcattgtcatg 122  Q
    |||||||| |  |||||||||||    
T  22360540 agatttagctactcattgtcatg 22360562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 29980935 - 29981057
Alignment:
Q  1 agaataacttcaatatcatgtaaattgctagaatcatatattacaagattaaaagattacattctaagctca-atcaagtacctctaatcccaactaaag 99  Q
    |||||||| |||||||||  | || |||||||| ||||||||   |||| ||| ||||||||  ||| ||   |||||||||||||||||||||| || |    
T  29980935 agaataacctcaatatcaattcaaatgctagaaccatatatttatagatcaaacgattacatgttaaactatgatcaagtacctctaatcccaacaaagg 29981034  T
Q  100 agatttagttcatcattgtcatg 122  Q
    |||||||| |  |||||||||||    
T  29981035 agatttagctactcattgtcatg 29981057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 34357034 - 34356912
Alignment:
Q  1 agaataacttcaatatcatgtaaattgctagaatcatatattacaagattaaaagattacattctaagctca-atcaagtacctctaatcccaactaaag 99  Q
    |||||||| |||||||||  | || |||||||| ||||||||   |||| ||| ||||||||  ||| ||   |||||||||||||||||||||| || |    
T  34357034 agaataacctcaatatcaattcaaatgctagaaccatatatttatagatcaaacgattacatgttaaactatgatcaagtacctctaatcccaacaaagg 34356935  T
Q  100 agatttagttcatcattgtcatg 122  Q
    |||||||| |  |||||||||||    
T  34356934 agatttagctactcattgtcatg 34356912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 34358825 - 34358703
Alignment:
Q  1 agaataacttcaatatcatgtaaattgctagaatcatatattacaagattaaaagattacattctaagctca-atcaagtacctctaatcccaactaaag 99  Q
    |||||||| |||||||||  | || |||||||| ||||||||   |||| ||| ||||||||  ||| ||   |||||||||||||||||||||| || |    
T  34358825 agaataacctcaatatcaattcaaatgctagaaccatatatttatagatcaaatgattacatgttaaactatgatcaagtacctctaatcccaacaaagg 34358726  T
Q  100 agatttagttcatcattgtcatg 122  Q
    |||||||| |  |||||||||||    
T  34358725 agatttagctactcattgtcatg 34358703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 3664103 - 3664144
Alignment:
Q  1 agaataacttcaatatcatgtaaattgctagaatcatatatt 42  Q
    |||||||  ||||||||| |||||||||||||||||||||||    
T  3664103 agaataaactcaatatcaagtaaattgctagaatcatatatt 3664144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 21 - 62
Target Start/End: Complemental strand, 11766964 - 11766923
Alignment:
Q  21 taaattgctagaatcatatattacaagattaaaagattacat 62  Q
    ||||||||||||| ||||||||| ||||| ||||||||||||    
T  11766964 taaattgctagaaccatatattaaaagatcaaaagattacat 11766923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 21 - 62
Target Start/End: Complemental strand, 31846189 - 31846148
Alignment:
Q  21 taaattgctagaatcatatattacaagattaaaagattacat 62  Q
    ||||||||||||| ||||||||| ||||| ||||||||||||    
T  31846189 taaattgctagaaccatatattaaaagatcaaaagattacat 31846148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 21 - 62
Target Start/End: Complemental strand, 33434812 - 33434771
Alignment:
Q  21 taaattgctagaatcatatattacaagattaaaagattacat 62  Q
    ||||||||||||| ||||||||| ||||| ||||||||||||    
T  33434812 taaattgctagaaccatatattaaaagatcaaaagattacat 33434771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 177; Significance: 1e-95; HSPs: 29)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 177; E-Value: 1e-95
Query Start/End: Original strand, 1 - 197
Target Start/End: Complemental strand, 10830871 - 10830675
Alignment:
Q  1 agaataacttcaatatcatgtaaattgctagaatcatatattacaagattaaaagattacattctaagctcaatcaagtacctctaatcccaactaaaga 100  Q
    |||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  10830871 agaataacatcaatatcatgtaaattgctagaataatatattacaagattaaaagattacattctaagctcaatcaagtacctctaatcccaactaagga 10830772  T
Q  101 gatttagttcatcattgtcatgagaacattacaaaagtggaagaaaagttgagaatccatgcaaggaacttgatttctccaagaatcttgatgaatc 197  Q
    ||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10830771 gatttagttcatcattgtcatgagaacattacaaaagtggaatgaaagttgagaatccatgcaaggaacttgatttctccaagaatcttgatgaatc 10830675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 177; E-Value: 1e-95
Query Start/End: Original strand, 1 - 197
Target Start/End: Complemental strand, 11024663 - 11024467
Alignment:
Q  1 agaataacttcaatatcatgtaaattgctagaatcatatattacaagattaaaagattacattctaagctcaatcaagtacctctaatcccaactaaaga 100  Q
    |||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  11024663 agaataacatcaatatcatgtaaattgctagaataatatattacaagattaaaagattacattctaagctcaatcaagtacctctaatcccaactaagga 11024564  T
Q  101 gatttagttcatcattgtcatgagaacattacaaaagtggaagaaaagttgagaatccatgcaaggaacttgatttctccaagaatcttgatgaatc 197  Q
    ||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11024563 gatttagttcatcattgtcatgagaacattacaaaagtggaatgaaagttgagaatccatgcaaggaacttgatttctccaagaatcttgatgaatc 11024467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 173; E-Value: 3e-93
Query Start/End: Original strand, 1 - 197
Target Start/End: Complemental strand, 21900934 - 21900739
Alignment:
Q  1 agaataacttcaatatcatgtaaattgctagaatcatatattacaagattaaaagattacattctaagctcaatcaagtacctctaatcccaactaaaga 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||    
T  21900934 agaataacttcaatatcatgtaaattgctagaatcatatattacaagattaaaagat-acattctaagctcaatcaagtacctctaatcccaactaagga 21900836  T
Q  101 gatttagttcatcattgtcatgagaacattacaaaagtggaagaaaagttgagaatccatgcaaggaacttgatttctccaagaatcttgatgaatc 197  Q
    ||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  21900835 gatttagttcatcattgtcatgagaacattacaaaagtggaatgaaagttgagaatccatgcaaagaacttgatttctccaagaatcttgatgaatc 21900739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 8881158 - 8881011
Alignment:
Q  1 agaataacttcaatatcatgtaaattgctagaatcatatatt-acaagattaaaagattacattctaagctcaatcaagtacctctaatcccaactaaag 99  Q
    |||||||  |||||||||  |||| |||||||||||| |||| | ||||| ||||||||||||| ||||||  |||||||||||||||||||||| || |    
T  8881158 agaataaactcaatatcacataaaatgctagaatcatttatttaaaagatcaaaagattacatt-taagcttgatcaagtacctctaatcccaacaaagg 8881060  T
Q  100 agatttagttcatcattgtcatgagaacattacaaaagtggaagaaaag 148  Q
    |||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  8881059 agatttagttgatcattgtcatgataacattacaaaagtggaagaaaag 8881011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 19090284 - 19090407
Alignment:
Q  1 agaataacttcaatatcatgtaaattgctagaatcatatattacaagattaaaagattacat-tctaagctca-atcaagtacctctaatcccaactaaa 98  Q
    |||||||| |||||||||  | || |||||||| ||||||||   |||| |||||||||||| | |||||| | |||||||||||||||||||||| |||    
T  19090284 agaataacatcaatatcaaatcaaatgctagaaccatatatttatagatcaaaagattacatgtttaagctaagatcaagtacctctaatcccaacaaaa 19090383  T
Q  99 gagatttagttcatcattgtcatg 122  Q
    ||||||||| |  |||||||||||    
T  19090384 gagatttagctactcattgtcatg 19090407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 6020610 - 6020488
Alignment:
Q  1 agaataacttcaatatcatgtaaattgctagaatcatatattacaagattaaaagattacattctaagctca-atcaagtacctctaatcccaactaaag 99  Q
    |||||||| |||||||||  | || |||||||| ||||||||   |||| ||||||||||||  |||||| | |||||||||||||||||||||| || |    
T  6020610 agaataacatcaatatcaaatcaaatgctagaaccatatatttatagatcaaaagattacatgttaagctaagatcaagtacctctaatcccaacaaagg 6020511  T
Q  100 agatttagttcatcattgtcatg 122  Q
    |||||||| |  |||||||||||    
T  6020510 agatttagctactcattgtcatg 6020488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 8185138 - 8185016
Alignment:
Q  1 agaataacttcaatatcatgtaaattgctagaatcatatattacaagattaaaagattacattctaagctca-atcaagtacctctaatcccaactaaag 99  Q
    |||||||| |||||||||  | || |||||||| ||||||||   |||| ||||||||||||  |||||| | |||||||||||||||||||||| || |    
T  8185138 agaataacatcaatatcaaatcaaatgctagaaccatatatttatagatcaaaagattacatgttaagctaagatcaagtacctctaatcccaacaaagg 8185039  T
Q  100 agatttagttcatcattgtcatg 122  Q
    |||||||| |  |||||||||||    
T  8185038 agatttagctactcattgtcatg 8185016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 8192698 - 8192576
Alignment:
Q  1 agaataacttcaatatcatgtaaattgctagaatcatatattacaagattaaaagattacattctaagctca-atcaagtacctctaatcccaactaaag 99  Q
    |||||||| |||||||||  | || |||||||| ||||||||   |||| ||||||||||||  |||||| | |||||||||||||||||||||| || |    
T  8192698 agaataacatcaatatcaaatcaaatgctagaaccatatatttatagatcaaaagattacatgttaagctaagatcaagtacctctaatcccaacaaagg 8192599  T
Q  100 agatttagttcatcattgtcatg 122  Q
    |||||||| |  |||||||||||    
T  8192598 agatttagctactcattgtcatg 8192576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 14288191 - 14288313
Alignment:
Q  1 agaataacttcaatatcatgtaaattgctagaatcatatattacaagattaaaagattacattctaagctca-atcaagtacctctaatcccaactaaag 99  Q
    |||||||| |||||||||  | || |||||||||||||||||   |||| ||| ||||||||  |||||| | |||||||||||||||||||||| || |    
T  14288191 agaataacatcaatatcaattcaaatgctagaatcatatatttatagatcaaaggattacatgttaagctaagatcaagtacctctaatcccaacaaagg 14288290  T
Q  100 agatttagttcatcattgtcatg 122  Q
    |||||||| |  |||||||||||    
T  14288291 agatttagctactcattgtcatg 14288313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 22853952 - 22853830
Alignment:
Q  1 agaataacttcaatatcatgtaaattgctagaatcatatattacaagattaaaagattacattctaagctca-atcaagtacctctaatcccaactaaag 99  Q
    |||||||| |||||||||  | || |||||||| ||||||||   |||| ||||||||||||  |||||| | |||||||||||||||||||||| || |    
T  22853952 agaataacatcaatatcaaatcaaatgctagaaccatatatttatagatcaaaagattacatgttaagctaagatcaagtacctctaatcccaacaaagg 22853853  T
Q  100 agatttagttcatcattgtcatg 122  Q
    |||||||| |  |||||||||||    
T  22853852 agatttagctactcattgtcatg 22853830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 23612865 - 23612987
Alignment:
Q  1 agaataacttcaatatcatgtaaattgctagaatcatatattacaagattaaaagattacattctaagctca-atcaagtacctctaatcccaactaaag 99  Q
    |||||||| |||||||||  | || |||||||| ||||||||   |||| ||||||||||||  |||||| | |||||||||||||||||||||| || |    
T  23612865 agaataacatcaatatcaaatcaaatgctagaaccatatatttatagatcaaaagattacatgttaagctaagatcaagtacctctaatcccaacaaagg 23612964  T
Q  100 agatttagttcatcattgtcatg 122  Q
    |||||||| |  |||||||||||    
T  23612965 agatttagctactcattgtcatg 23612987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 26602388 - 26602510
Alignment:
Q  1 agaataacttcaatatcatgtaaattgctagaatcatatattacaagattaaaagattacattctaagctca-atcaagtacctctaatcccaactaaag 99  Q
    |||||||| |||||||||  | || |||||||| ||||||||   |||| ||||||||||||  |||||| | |||||||||||||||||||||| || |    
T  26602388 agaataacatcaatatcaaatcaaatgctagaaccatatatttatagatcaaaagattacatgttaagctaagatcaagtacctctaatcccaacaaagg 26602487  T
Q  100 agatttagttcatcattgtcatg 122  Q
    |||||||| |  |||||||||||    
T  26602488 agatttagctactcattgtcatg 26602510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 33850389 - 33850267
Alignment:
Q  1 agaataacttcaatatcatgtaaattgctagaatcatatattacaagattaaaagattacattctaagctca-atcaagtacctctaatcccaactaaag 99  Q
    |||||||| |||||||||  | || |||||||| |||||||| | |||| ||||||||||||  |||||| | |||||||||||||||||||||| || |    
T  33850389 agaataacatcaatatcaaatcaaatgctagaaccatatatttctagatcaaaagattacatgttaagctaagatcaagtacctctaatcccaacaaagg 33850290  T
Q  100 agatttagttcatcattgtcatg 122  Q
    |||||||  |  |||||||||||    
T  33850289 agatttatctactcattgtcatg 33850267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 36876021 - 36876143
Alignment:
Q  1 agaataacttcaatatcatgtaaattgctagaatcatatattacaagattaaaagattacattctaagctca-atcaagtacctctaatcccaactaaag 99  Q
    |||||||| |||||||||  | || |||||||| ||||||||   |||| ||||||||||||  ||||||   |||||||||||||||||||||| ||||    
T  36876021 agaataacatcaatatcaaatcaaatgctagaaccatatatttatagatcaaaagattacatgttaagctatgatcaagtacctctaatcccaacaaaag 36876120  T
Q  100 agatttagttcatcattgtcatg 122  Q
    |||||||| |  |||||||||||    
T  36876121 agatttagctactcattgtcatg 36876143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 48353226 - 48353104
Alignment:
Q  1 agaataacttcaatatcatgtaaattgctagaatcatatattacaagattaaaagattacattctaagctca-atcaagtacctctaatcccaactaaag 99  Q
    |||||||| |||||||||  | || |||||||| ||||||||   |||| ||||||||||||  |||||| | |||||||||||||||||||||| || |    
T  48353226 agaataacatcaatatcaaatcaaatgctagaaccatatatttatagatcaaaagattacatgttaagctaagatcaagtacctctaatcccaacaaagg 48353127  T
Q  100 agatttagttcatcattgtcatg 122  Q
    |||||||| |  |||||||||||    
T  48353126 agatttagctactcattgtcatg 48353104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 1948379 - 1948272
Alignment:
Q  1 agaataacttcaatatcatgtaaattgctagaatcatatattacaagattaaaagattacattctaagctca-atcaagtacctctaatcccaactaaag 99  Q
    |||||||| |||||||||  | || |||||||| ||||||||   |||| ||||||||||||  |||||| | |||||||||||||||||||||| || |    
T  1948379 agaataacatcaatatcaaatcaaatgctagaaccatatatttatagatcaaaagattacatgttaagctaagatcaagtacctctaatcccaacaaagg 1948280  T
Q  100 agatttag 107  Q
    ||||||||    
T  1948279 agatttag 1948272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 48346842 - 48346735
Alignment:
Q  1 agaataacttcaatatcatgtaaattgctagaatcatatattacaagattaaaagattacattctaagctca-atcaagtacctctaatcccaactaaag 99  Q
    |||||||| |||||||||  | || |||||||| ||||||||   |||| ||||||||||||  |||||| | |||||||||||||||||||||| || |    
T  48346842 agaataacatcaatatcaaatcaaatgctagaaccatatatttatagatcaaaagattacatgttaagctaagatcaagtacctctaatcccaacaaagg 48346743  T
Q  100 agatttag 107  Q
    ||||||||    
T  48346742 agatttag 48346735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 14299376 - 14299498
Alignment:
Q  1 agaataacttcaatatcatgtaaattgctagaatcatatattacaagattaaaagattacattctaagctca-atcaagtacctctaatcccaactaaag 99  Q
    |||||||| |||||||||  | || |||||||||||||||||   |||| ||| ||||||||  |||||| | |||||||||||||||||| ||| || |    
T  14299376 agaataacatcaatatcaattcaaatgctagaatcatatatttatagatcaaaggattacatgttaagctaagatcaagtacctctaatcctaacaaagg 14299475  T
Q  100 agatttagttcatcattgtcatg 122  Q
    |||||||| |  |||||||||||    
T  14299476 agatttagctactcattgtcatg 14299498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 15915113 - 15915235
Alignment:
Q  1 agaataacttcaatatcatgtaaattgctagaatcatatattacaagattaaaagattacattctaagctca-atcaagtacctctaatcccaactaaag 99  Q
    |||||||| |||||||||  | || |||||||| ||||||||   |||| ||||||||||||  |||||| | |||||||||||||||||||||| || |    
T  15915113 agaataacatcaatatcaaatcaaatgctagaaccatatatttatagatcaaaagattacatgttaagctaagatcaagtacctctaatcccaacaaagg 15915212  T
Q  100 agatttagttcatcattgtcatg 122  Q
    |||| ||| |  |||||||||||    
T  15915213 agatctagctactcattgtcatg 15915235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 15949634 - 15949756
Alignment:
Q  1 agaataacttcaatatcatgtaaattgctagaatcatatattacaagattaaaagattacattctaagctca-atcaagtacctctaatcccaactaaag 99  Q
    |||||||| |||||||||  | || |||||||| ||||||||   |||| ||||||||||||  |||||| | |||||||||||||||||||||| || |    
T  15949634 agaataacatcaatatcaaatcaaatgctagaaccatatatttatagatcaaaagattacatgttaagctaagatcaagtacctctaatcccaacaaagg 15949733  T
Q  100 agatttagttcatcattgtcatg 122  Q
    |||| ||| |  |||||||||||    
T  15949734 agatctagctactcattgtcatg 15949756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 21642994 - 21643116
Alignment:
Q  1 agaataacttcaatatcatgtaaattgctagaatcatatattacaagattaaaagattacattctaagctca-atcaagtacctctaatcccaactaaag 99  Q
    |||||||| |||||||||  | || |||||||| ||||||||   |||| ||||||||||||  |||||| | |||||||||||||||| ||||| || |    
T  21642994 agaataacatcaatatcaaatcaaatgctagaaccatatatttatagatcaaaagattacatgttaagctaagatcaagtacctctaatgccaacaaagg 21643093  T
Q  100 agatttagttcatcattgtcatg 122  Q
    |||||||| |  |||||||||||    
T  21643094 agatttagctactcattgtcatg 21643116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 39433383 - 39433505
Alignment:
Q  1 agaataacttcaatatcatgtaaattgctagaatcatatattacaagattaaaagattacattctaagctca-atcaagtacctctaatcccaactaaag 99  Q
    |||||||| |||||||||  | || |||||||| || |||||   |||| ||||||||||||  |||||| | |||||||||||||||||| ||| ||||    
T  39433383 agaataacatcaatatcaaatcaaatgctagaaccagatatttatagatcaaaagattacatgttaagctaagatcaagtacctctaatcctaacaaaag 39433482  T
Q  100 agatttagttcatcattgtcatg 122  Q
    |||||||| |  |||||||||||    
T  39433483 agatttagctactcattgtcatg 39433505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 3923839 - 3923717
Alignment:
Q  1 agaataacttcaatatcatgtaaattgctagaatcatatattacaagattaaaagattacattctaagctca-atcaagtacctctaatcccaactaaag 99  Q
    |||||||| |||||||||  | || |||||||| ||||||||   |||| ||| ||||||||  |||||| | |||||||||||||||||||||| || |    
T  3923839 agaataacatcaatatcaattcaaatgctagaaccatatatttatagatcaaaggattacatgttaagctaagatcaagtacctctaatcccaacaaagg 3923740  T
Q  100 agatttagttcatcattgtcatg 122  Q
     ||||||| |  |||||||||||    
T  3923739 tgatttagctactcattgtcatg 3923717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 8142191 - 8142068
Alignment:
Q  1 agaataacttcaatatcatgtaaattgctagaatcatatattacaagattaaaagattacat-tctaagctca-atcaagtacctctaatcccaactaaa 98  Q
    |||||||| |||||||||  | || |||||||| ||||||||   |||| ||| |||||||| | ||||||   |||||||||||||||||||||| ||     
T  8142191 agaataacatcaatatcaaatcaaatgctagaaccatatatttatagatcaaaggattacatgtttaagctatgatcaagtacctctaatcccaacaaag 8142092  T
Q  99 gagatttagttcatcattgtcatg 122  Q
    ||||||||| |  |||||||||||    
T  8142091 gagatttagctactcattgtcatg 8142068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 1379423 - 1379545
Alignment:
Q  1 agaataacttcaatatcatgtaaattgctagaatcatatattacaagattaaaagattacattctaagctca-atcaagtacctctaatcccaactaaag 99  Q
    |||||||| |||||||||  | || |||||||| ||||||||   |||| ||| ||||||||  ||| ||   |||||||||||||||||||||| || |    
T  1379423 agaataacctcaatatcaattcaaatgctagaaccatatatttatagatcaaacgattacatgttaaactatgatcaagtacctctaatcccaacaaagg 1379522  T
Q  100 agatttagttcatcattgtcatg 122  Q
    |||||||| |  |||||||||||    
T  1379523 agatttagctactcattgtcatg 1379545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 2447122 - 2447244
Alignment:
Q  1 agaataacttcaatatcatgtaaattgctagaatcatatattacaagattaaaagattacattctaagctca-atcaagtacctctaatcccaactaaag 99  Q
    |||||||| |||||||||  | || |||||||| ||||||||   |||| ||| ||||||||  ||| ||   |||||||||||||||||||||| || |    
T  2447122 agaataacctcaatatcaattcaaatgctagaaccatatatttatagatcaaacgattacatgttaaactatgatcaagtacctctaatcccaacaaagg 2447221  T
Q  100 agatttagttcatcattgtcatg 122  Q
    |||||||| |  |||||||||||    
T  2447222 agatttagctactcattgtcatg 2447244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 5049658 - 5049536
Alignment:
Q  1 agaataacttcaatatcatgtaaattgctagaatcatatattacaagattaaaagattacattctaagctca-atcaagtacctctaatcccaactaaag 99  Q
    |||||||| |||||||||  | || |||||||| ||||||||   |||| ||| ||||||||  ||| ||   |||||||||||||||||||||| || |    
T  5049658 agaataacctcaatatcaattcaaatgctagaaccatatatttatagatcaaacgattacatgttaaactatgatcaagtacctctaatcccaacaaagg 5049559  T
Q  100 agatttagttcatcattgtcatg 122  Q
    |||||||| |  |||||||||||    
T  5049558 agatttagctactcattgtcatg 5049536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 6795914 - 6796036
Alignment:
Q  1 agaataacttcaatatcatgtaaattgctagaatcatatattacaagattaaaagattacattctaagctca-atcaagtacctctaatcccaactaaag 99  Q
    |||||||| |||||||||  | || |||||||| ||||||||   |||| ||| ||||||||  ||| ||   |||||||||||||||||||||| || |    
T  6795914 agaataacctcaatatcaattcaaatgctagaaccatatatttatagatcaaacgattacatgttaaactatgatcaagtacctctaatcccaacaaagg 6796013  T
Q  100 agatttagttcatcattgtcatg 122  Q
    |||||||| |  |||||||||||    
T  6796014 agatttagctactcattgtcatg 6796036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 9642662 - 9642540
Alignment:
Q  1 agaataacttcaatatcatgtaaattgctagaatcatatattacaagattaaaagattacattctaagctca-atcaagtacctctaatcccaactaaag 99  Q
    |||||||| |||||||||  | || |||||||| |||||| |   |||| ||||||||||||  ||| ||   |||||||||||||||||||||| || |    
T  9642662 agaataacatcaatatcaaatcaaatgctagaaccatataattatagatcaaaagattacatgttaaactatgatcaagtacctctaatcccaacaaagg 9642563  T
Q  100 agatttagttcatcattgtcatg 122  Q
    |||||||| |  |||||||||||    
T  9642562 agatttagctactcattgtcatg 9642540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 177; Significance: 1e-95; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 177; E-Value: 1e-95
Query Start/End: Original strand, 1 - 197
Target Start/End: Complemental strand, 10081308 - 10081112
Alignment:
Q  1 agaataacttcaatatcatgtaaattgctagaatcatatattacaagattaaaagattacattctaagctcaatcaagtacctctaatcccaactaaaga 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  10081308 agaataacttcaatatcatgtaaattgctagaatcatatattacaagattaaaagattacattctaagctcaatcaagtacctttaatcccaactaaaga 10081209  T
Q  101 gatttagttcatcattgtcatgagaacattacaaaagtggaagaaaagttgagaatccatgcaaggaacttgatttctccaagaatcttgatgaatc 197  Q
    |||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||| ||||||||||||||||||    
T  10081208 gatttatttcatcattgtcatgagaacattacaaaagtggaaggaaagttgagaatccatgcaaggaactttatttcttcaagaatcttgatgaatc 10081112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 1 - 197
Target Start/End: Original strand, 9846997 - 9847194
Alignment:
Q  1 agaataacttcaatatcatgtaaattgctagaatcatatatta-caagattaaaagattacattctaagctcaatcaagtacctctaatcccaactaaag 99  Q
    |||||| | |||||||||||||||||||||||||||||||||  |||||| ||||||||||||||| | || |||||||||||||||||||||||||| |    
T  9846997 agaatatcatcaatatcatgtaaattgctagaatcatatatttgcaagatcaaaagattacattctgaacttaatcaagtacctctaatcccaactaagg 9847096  T
Q  100 agatttagttcatcattgtcatgagaacattacaaaagtggaagaaaagttgagaatccatgcaaggaacttgatttctccaagaatcttgatgaatc 197  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||| |||  |||||||| | ||   ||||||||| |  ||||||||||||||    
T  9847097 agatttagttcatcattgtcatgagaacattacaaaagtggaaggaaagatgaagatccatgctaagagaatgatttctcaacaaatcttgatgaatc 9847194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 6 - 197
Target Start/End: Original strand, 11016569 - 11016760
Alignment:
Q  6 aacttcaatatcatgtaaattgctagaatcatatattacaagattaaaagattacattctaagctcaatcaagtacctctaatcccaactaaagagattt 105  Q
    |||||||||||||||||||||||||||||||||||||  ||||| ||||||||||||||||||||  ||||| |||||||||||||||| || |||||||    
T  11016569 aacttcaatatcatgtaaattgctagaatcatatattgaaagatcaaaagattacattctaagcttgatcaaatacctctaatcccaacaaaggagattt 11016668  T
Q  106 agttcatcattgtcatgagaacattacaaaagtggaagaaaagttgagaatccatgcaaggaacttgatttctccaagaatcttgatgaatc 197  Q
    |||| ||||||||| ||| |||||||||||||||||| | ||| |||| |||||||| |  |  |||||||||| |||  ||||||||||||    
T  11016669 agttgatcattgtcgtgataacattacaaaagtggaatacaagatgaggatccatgccaatagattgatttctcaaaggttcttgatgaatc 11016760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 27 - 122
Target Start/End: Original strand, 22870742 - 22870837
Alignment:
Q  27 gctagaatcatatattacaagattaaaagattacattctaagctcaatcaagtacctctaatcccaactaaagagatttagttcatcattgtcatg 122  Q
    ||||||||||||||||| | ||| |||| ||||||| ||| |||  |||||||||||||||||||||| || ||||||||| | |||||| |||||    
T  22870742 gctagaatcatatattaaaggatcaaaatattacatactacgcttgatcaagtacctctaatcccaacaaaggagatttagctaatcattctcatg 22870837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 4019981 - 4019859
Alignment:
Q  1 agaataacttcaatatcatgtaaattgctagaatcatatattacaagattaaaagattacattctaagctca-atcaagtacctctaatcccaactaaag 99  Q
    |||||||| |||||||||  | || |||||||| ||||||||   |||| ||||||||||||  |||||| | |||||||||||||||||||||| || |    
T  4019981 agaataacatcaatatcaaatcaaatgctagaaccatatatttatagatcaaaagattacatgttaagctaagatcaagtacctctaatcccaacaaagg 4019882  T
Q  100 agatttagttcatcattgtcatg 122  Q
    |||||||| |  |||||||||||    
T  4019881 agatttagctactcattgtcatg 4019859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 4026407 - 4026285
Alignment:
Q  1 agaataacttcaatatcatgtaaattgctagaatcatatattacaagattaaaagattacattctaagctca-atcaagtacctctaatcccaactaaag 99  Q
    |||||||| |||||||||  | || |||||||| ||||||||   |||| ||||||||||||  |||||| | |||||||||||||||||||||| || |    
T  4026407 agaataacatcaatatcaaatcaaatgctagaaccatatatttatagatcaaaagattacatgttaagctaagatcaagtacctctaatcccaacaaagg 4026308  T
Q  100 agatttagttcatcattgtcatg 122  Q
    |||||||| |  |||||||||||    
T  4026307 agatttagctactcattgtcatg 4026285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 7062262 - 7062140
Alignment:
Q  1 agaataacttcaatatcatgtaaattgctagaatcatatattacaagattaaaagattacattctaagctca-atcaagtacctctaatcccaactaaag 99  Q
    |||||||| |||||||||  | || |||||||| ||||||||   |||| ||||||||||||  |||||| | |||||||||||||||||||||| || |    
T  7062262 agaataacatcaatatcaaatcaaatgctagaaccatatatttatagatcaaaagattacatgttaagctaagatcaagtacctctaatcccaacaaagg 7062163  T
Q  100 agatttagttcatcattgtcatg 122  Q
    |||||||| |  |||||||||||    
T  7062162 agatttagctactcattgtcatg 7062140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 7069448 - 7069326
Alignment:
Q  1 agaataacttcaatatcatgtaaattgctagaatcatatattacaagattaaaagattacattctaagctca-atcaagtacctctaatcccaactaaag 99  Q
    |||||||| |||||||||  | || |||||||| ||||||||   |||| ||||||||||||  |||||| | |||||||||||||||||||||| || |    
T  7069448 agaataacatcaatatcaaatcaaatgctagaaccatatatttatagatcaaaagattacatgttaagctaagatcaagtacctctaatcccaacaaagg 7069349  T
Q  100 agatttagttcatcattgtcatg 122  Q
    |||||||| |  |||||||||||    
T  7069348 agatttagctactcattgtcatg 7069326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 34655727 - 34655849
Alignment:
Q  1 agaataacttcaatatcatgtaaattgctagaatcatatattacaagattaaaagattacattctaagctca-atcaagtacctctaatcccaactaaag 99  Q
    |||||||| |||||||||  | || |||||||| ||||||||   |||| ||||||||||||  |||||| | |||||||||||||||||||||| || |    
T  34655727 agaataacatcaatatcaaatcaaatgctagaaccatatatttatagatcaaaagattacatgttaagctaagatcaagtacctctaatcccaacaaagg 34655826  T
Q  100 agatttagttcatcattgtcatg 122  Q
    |||||||| |  |||||||||||    
T  34655827 agatttagctactcattgtcatg 34655849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 9864506 - 9864384
Alignment:
Q  1 agaataacttcaatatcatgtaaattgctagaatcatatattacaagattaaaagattacattctaagctca-atcaagtacctctaatcccaactaaag 99  Q
    |||||||| |||||||||  | || |||||||| ||||||||   |||| ||||||||||||  |||||| | |||||||||||||||||||||| || |    
T  9864506 agaataacatcaatatcaaatcaaatgctagaaccatatatttatagatcaaaagattacatgttaagctaagatcaagtacctctaatcccaacaaagg 9864407  T
Q  100 agatttagttcatcattgtcatg 122  Q
    |||||||  |  |||||||||||    
T  9864406 agatttatctactcattgtcatg 9864384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 31548371 - 31548493
Alignment:
Q  1 agaataacttcaatatcatgtaaattgctagaatcatatattacaagattaaaagattacattctaagctca-atcaagtacctctaatcccaactaaag 99  Q
    |||||||| |||||||||  | || |||||||| ||||||||   | || ||||||||||||  |||||| | |||||||||||||||||||||| || |    
T  31548371 agaataacatcaatatcaaatcaaatgctagaaccatatatttataaatcaaaagattacatgttaagctaagatcaagtacctctaatcccaacaaagg 31548470  T
Q  100 agatttagttcatcattgtcatg 122  Q
    |||||||| |  |||||||||||    
T  31548471 agatttagctactcattgtcatg 31548493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 34649276 - 34649398
Alignment:
Q  1 agaataacttcaatatcatgtaaattgctagaatcatatattacaagattaaaagattacattctaagctca-atcaagtacctctaatcccaactaaag 99  Q
    |||||||| |||||||||  | || |||||||| ||||||||   |||| ||||||||||||  |||||| | |||||||||||||||||| ||| || |    
T  34649276 agaataacatcaatatcaaatcaaatgctagaaccatatatttatagatcaaaagattacatgttaagctaagatcaagtacctctaatcctaacaaagg 34649375  T
Q  100 agatttagttcatcattgtcatg 122  Q
    |||||||| |  |||||||||||    
T  34649376 agatttagctactcattgtcatg 34649398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 21262320 - 21262212
Alignment:
Q  1 agaataacttcaatatcatgtaaattgctagaatcatatattacaagattaaaagattacat-tctaagctca-atcaagtacctctaatcccaactaaa 98  Q
    |||||||| |||||||||  | || |||||||| ||||||||   |||| |||||||||||| | |||||| | |||||||||||||||||||||| ||     
T  21262320 agaataacatcaatatcaaatcaaatgctagaaccatatatttatagatcaaaagattacatgtttaagctaagatcaagtacctctaatcccaacaaag 21262221  T
Q  99 gagatttag 107  Q
    |||||||||    
T  21262220 gagatttag 21262212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 27670570 - 27670677
Alignment:
Q  1 agaataacttcaatatcatgtaaattgctagaatcatatattacaagattaaaagattacattctaagctca-atcaagtacctctaatcccaactaaag 99  Q
    |||||||| |||||||||  | || |||||||| ||||||||   |||| ||||||||||||  |||||| | |||||||||||||||||| ||| || |    
T  27670570 agaataacatcaatatcaaattaaatgctagaaccatatatttatagatcaaaagattacatgttaagctaagatcaagtacctctaatccgaacaaagg 27670669  T
Q  100 agatttag 107  Q
    ||||||||    
T  27670670 agatttag 27670677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 29907335 - 29907457
Alignment:
Q  1 agaataacttcaatatcatgtaaattgctagaatcatatattacaagattaaaagattacattctaagctca-atcaagtacctctaatcccaactaaag 99  Q
    |||||||| ||||| |||  | || |||||||||||||||||   |||| ||||||||||||  ||||||   |||||||||||||||||||||| || |    
T  29907335 agaataacatcaatttcaaatcaaatgctagaatcatatatttatagatcaaaagattacatgttaagctaggatcaagtacctctaatcccaacaaagg 29907434  T
Q  100 agatttagttcatcattgtcatg 122  Q
    |||||||  |  |||||||||||    
T  29907435 agatttaactactcattgtcatg 29907457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 13671563 - 13671438
Alignment:
Q  1 agaataacttcaatatcatgtaaattgctagaatcatatattacaagattaaaagattacattctaagctca-atca---agtacctctaatcccaacta 96  Q
    |||||||| |||||||||  | || |||||||| ||||||||   |||| ||||||||||||  |||||| | ||||   |||||||||||||||||| |    
T  13671563 agaataacatcaatatcaaatcaaatgctagaaccatatatttatagatcaaaagattacatgttaagctaagatcaagtagtacctctaatcccaacaa 13671464  T
Q  97 aagagatttagttcatcattgtcatg 122  Q
    | ||||||||| |  |||||||||||    
T  13671463 aggagatttagctactcattgtcatg 13671438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 31129037 - 31128914
Alignment:
Q  1 agaataacttcaatatcatgtaaattgctagaatcatatattacaagattaaaagattacat-tctaagctca-atcaagtacctctaatcccaactaaa 98  Q
    |||||||| |||||||||  | || |||||||| ||||||||   | || |||||||||||| | ||||||   |||||||||||||||||||||| ||     
T  31129037 agaataacatcaatatcaaatcaaatgctagaaccatatatttataaatcaaaagattacatgtttaagctatgatcaagtacctctaatcccaacaaag 31128938  T
Q  99 gagatttagttcatcattgtcatg 122  Q
    ||||||||| |  |||||||||||    
T  31128937 gagatttagctactcattgtcatg 31128914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 1428169 - 1428047
Alignment:
Q  1 agaataacttcaatatcatgtaaattgctagaatcatatattacaagattaaaagattacattctaagctca-atcaagtacctctaatcccaactaaag 99  Q
    |||||||| |||||||||  | || |||||||| ||||||||   |||| ||| ||||||||  ||| ||   |||||||||||||||||||||| || |    
T  1428169 agaataacctcaatatcaattcaaatgctagaaccatatatttatagatcaaacgattacatgttaaactatgatcaagtacctctaatcccaacaaagg 1428070  T
Q  100 agatttagttcatcattgtcatg 122  Q
    |||||||| |  |||||||||||    
T  1428069 agatttagctactcattgtcatg 1428047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 73 - 122
Target Start/End: Complemental strand, 4718213 - 4718164
Alignment:
Q  73 atcaagtacctctaatcccaactaaagagatttagttcatcattgtcatg 122  Q
    |||||||||||||||||||||| || ||||||||| |  |||||||||||    
T  4718213 atcaagtacctctaatcccaacaaaggagatttagctactcattgtcatg 4718164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 177; Significance: 1e-95; HSPs: 29)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 177; E-Value: 1e-95
Query Start/End: Original strand, 1 - 197
Target Start/End: Complemental strand, 2824566 - 2824371
Alignment:
Q  1 agaataacttcaatatcatgtaaattgctagaatcatatattacaagattaaaagattacattctaagctcaatcaagtacctctaatcccaactaaaga 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||| ||    
T  2824566 agaataacttcaatatcatgtaaattgctagaatcatatattacaagattaaaagattacattctaagctcaatcaagtgcctctaatcccagctaagga 2824467  T
Q  101 gatttagttcatcattgtcatgagaacattacaaaagtggaagaaaagttgagaatccatgcaaggaacttgatttctccaagaatcttgatgaatc 197  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  2824466 gatttagttcatcattgtcatgagaacattacaaaagtggaagaaaagttgagaatccatgcaagg-acttgatttctccaagaatcttgatgaatc 2824371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 177; E-Value: 1e-95
Query Start/End: Original strand, 1 - 197
Target Start/End: Complemental strand, 28413419 - 28413223
Alignment:
Q  1 agaataacttcaatatcatgtaaattgctagaatcatatattacaagattaaaagattacattctaagctcaatcaagtacctctaatcccaactaaaga 100  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||    
T  28413419 agaataacttcaatatcatgtaaattactagaatcatatattacaagattaaaagattacattctaatctcaatcaagtacctctaatcccaactaagga 28413320  T
Q  101 gatttagttcatcattgtcatgagaacattacaaaagtggaagaaaagttgagaatccatgcaaggaacttgatttctccaagaatcttgatgaatc 197  Q
    |||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28413319 gatttagttcatcattgtcatgtgaacattacaaaagtggaaggaaagttgagaatccatgcaaggaacttgatttctccaagaatcttgatgaatc 28413223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 173; E-Value: 3e-93
Query Start/End: Original strand, 1 - 197
Target Start/End: Complemental strand, 38672523 - 38672327
Alignment:
Q  1 agaataacttcaatatcatgtaaattgctagaatcatatattacaagattaaaagattacattctaagctcaatcaagtacctctaatcccaactaaaga 100  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||    
T  38672523 agaataacttcaatatcatgtaaattgctagaatcatatattataagattaaaagattacattctaagctcaatcaagtacctctaatctcaactaagga 38672424  T
Q  101 gatttagttcatcattgtcatgagaacattacaaaagtggaagaaaagttgagaatccatgcaaggaacttgatttctccaagaatcttgatgaatc 197  Q
    ||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  38672423 gatttagttcatcattgtcatgagaactttacaaaagtggaaggaaagttgagaatccatgaaaggaacttgatttctccaagaatcttgatgaatc 38672327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 169; E-Value: 8e-91
Query Start/End: Original strand, 1 - 197
Target Start/End: Original strand, 39806533 - 39806729
Alignment:
Q  1 agaataacttcaatatcatgtaaattgctagaatcatatattacaagattaaaagattacattctaagctcaatcaagtacctctaatcccaactaaaga 100  Q
    |||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  39806533 agaataactttaatatcatgtaaattggtagaatcatatattacaagattaaaagattacattctaagctcaatcaagtacctctaatcccaactaagga 39806632  T
Q  101 gatttagttcatcattgtcatgagaacattacaaaagtggaagaaaagttgagaatccatgcaaggaacttgatttctccaagaatcttgatgaatc 197  Q
    ||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||| ||||||||    
T  39806633 gatttagttcatcattgtcatgagaactttacaaaagtggaaggaaagttgagaatccatgcaaggaactcgatttctccaagaatctcgatgaatc 39806729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 1 - 197
Target Start/End: Original strand, 23251828 - 23252024
Alignment:
Q  1 agaataacttcaatatcatgtaaattgctagaatcatatattacaagattaaaagattacattctaagctcaatcaagtacctctaatcccaactaaaga 100  Q
    |||||||||||||||||||||||||| ||||||||||||| |||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| ||    
T  23251828 agaataacttcaatatcatgtaaattactagaatcatataatacaagatcaaaagattacattctaagctcaaacaagtacctctaatcccaactaagga 23251927  T
Q  101 gatttagttcatcattgtcatgagaacattacaaaagtggaagaaaagttgagaatccatgcaaggaacttgatttctccaagaatcttgatgaatc 197  Q
    |||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||| | |||||||||||||||||||| |||||||||||    
T  23251928 gatttagttcatcattgtcatgtgaacattacaaaagtggaaggaaagttgagaatccatgccaagaacttgatttctccaagaaacttgatgaatc 23252024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 1 - 196
Target Start/End: Complemental strand, 5357493 - 5357298
Alignment:
Q  1 agaataacttcaatatcatgtaaattgctagaatcatatattacaagattaaaagattacattctaagctcaatcaagtacctctaatcccaactaaaga 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| || ||||||||||||| ||||||||| ||    
T  5357493 agaataacttcaatatcatgtaaattgctagaatcatatattacaagatcaaaggattacattctaagcttaaacaagtacctctaaccccaactaagga 5357394  T
Q  101 gatttagttcatcattgtcatgagaacattacaaaagtggaagaaaagttgagaatccatgcaaggaacttgatttctccaagaatcttgatgaat 196  Q
    || ||||||||||||||||||| |||||||||| ||||||||| |||||||||||| ||||| | |||||||||||||| ||||||||||||||||    
T  5357393 gaattagttcatcattgtcatgtgaacattacagaagtggaaggaaagttgagaattcatgccaagaacttgatttctcaaagaatcttgatgaat 5357298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 133; E-Value: 2e-69
Query Start/End: Original strand, 5 - 197
Target Start/End: Complemental strand, 45619886 - 45619694
Alignment:
Q  5 taacttcaatatcatgtaaattgctagaatcatatattacaagattaaaagattacattctaagctcaatcaagtacctctaatcccaactaaagagatt 104  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| | || |||||||||||||||| |||||| ||||||    
T  45619886 taacttcaatatcatgtaaattgctagaatcatatattacaagatcaaaagattacattctaagtttaaacaagtacctctaatccaaactaaggagatt 45619787  T
Q  105 tagttcatcattgtcatgagaacattacaaaagtggaagaaaagttgagaatccatgcaaggaacttgatttctccaagaatcttgatgaatc 197  Q
    |||||||||||||||||| |||||||||||||||||||| || ||||||||||||||  | |||||||||||||| || ||||| ||||||||    
T  45619786 tagttcatcattgtcatgtgaacattacaaaagtggaaggaaggttgagaatccatgtcaagaacttgatttctcaaataatctcgatgaatc 45619694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 125; E-Value: 1e-64
Query Start/End: Original strand, 10 - 197
Target Start/End: Original strand, 13432334 - 13432522
Alignment:
Q  10 tcaatatcatgtaaattgctagaatcatatattacaa-gattaaaagattacattctaagctcaatcaagtacctctaatcccaactaaagagatttagt 108  Q
    |||||||||||||||||||||||||||||||||  || ||| ||||||||||||| | | || |||||||||||| ||||||||||||| ||||||||||    
T  13432334 tcaatatcatgtaaattgctagaatcatatatttgaaagatcaaaagattacattatcaacttaatcaagtacctgtaatcccaactaaggagatttagt 13432433  T
Q  109 tcatcattgtcatgagaacattacaaaagtggaagaaaagttgagaatccatgcaaggaacttgatttctccaagaatcttgatgaatc 197  Q
    |||||||||||||||||| |||||||||||||||| |||||||||||||||||| | |||||||||||||| |||||||||||||||||    
T  13432434 tcatcattgtcatgagaaaattacaaaagtggaaggaaagttgagaatccatgccaagaacttgatttctcaaagaatcttgatgaatc 13432522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 1115728 - 1115606
Alignment:
Q  1 agaataacttcaatatcatgtaaattgctagaatcatatattacaagattaaaagattacattctaagctca-atcaagtacctctaatcccaactaaag 99  Q
    |||||||| |||||||||  | || |||||||| |||||||| | |||| ||||||||||||  |||||| | |||||||||||||||||||||| || |    
T  1115728 agaataacatcaatatcaaatcaaatgctagaaccatatatttctagatcaaaagattacatgttaagctaagatcaagtacctctaatcccaacaaagg 1115629  T
Q  100 agatttagttcatcattgtcatg 122  Q
    |||||||| |  |||||||||||    
T  1115628 agatttagctactcattgtcatg 1115606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 1175082 - 1175204
Alignment:
Q  1 agaataacttcaatatcatgtaaattgctagaatcatatattacaagattaaaagattacattctaagctca-atcaagtacctctaatcccaactaaag 99  Q
    |||||||| |||||||||  | || |||||||| ||||||||   |||| ||||||||||||  |||||| | |||||||||||||||||||||| || |    
T  1175082 agaataacatcaatatcaaatcaaatgctagaaccatatatttatagatcaaaagattacatgttaagctaagatcaagtacctctaatcccaacaaagg 1175181  T
Q  100 agatttagttcatcattgtcatg 122  Q
    |||||||| |  |||||||||||    
T  1175182 agatttagctactcattgtcatg 1175204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 4600005 - 4600127
Alignment:
Q  1 agaataacttcaatatcatgtaaattgctagaatcatatattacaagattaaaagattacattctaagctca-atcaagtacctctaatcccaactaaag 99  Q
    |||||||| |||||||||  | || |||||||| ||||||||   |||| ||||||||||||  |||||| | |||||||||||||||||||||| || |    
T  4600005 agaataacatcaatatcaaatcaaatgctagaaccatatatttatagatcaaaagattacatgttaagctaagatcaagtacctctaatcccaacaaagg 4600104  T
Q  100 agatttagttcatcattgtcatg 122  Q
    |||||||| |  |||||||||||    
T  4600105 agatttagctactcattgtcatg 4600127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 23762082 - 23761960
Alignment:
Q  1 agaataacttcaatatcatgtaaattgctagaatcatatattacaagattaaaagattacattctaagctca-atcaagtacctctaatcccaactaaag 99  Q
    |||||||| |||||||||  | || |||||||| ||||||||   |||||||||||||||||  ||||||   |||||||||||||||||||||| || |    
T  23762082 agaataacatcaatatcaaatcaaatgctagaaccatatatttatagattaaaagattacatgttaagctaggatcaagtacctctaatcccaacaaagg 23761983  T
Q  100 agatttagttcatcattgtcatg 122  Q
    |||||||| |  |||||||||||    
T  23761982 agatttagctactcattgtcatg 23761960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 32798200 - 32798322
Alignment:
Q  1 agaataacttcaatatcatgtaaattgctagaatcatatattacaagattaaaagattacattctaagctca-atcaagtacctctaatcccaactaaag 99  Q
    |||||||| |||||||||  | || |||||||| |||||||| | | || ||||||||||||  |||||| | |||||||||||||||||||||| || |    
T  32798200 agaataacatcaatatcaaatcaaatgctagaaccatatatttctacatcaaaagattacatgttaagctaagatcaagtacctctaatcccaacaaagg 32798299  T
Q  100 agatttagttcatcattgtcatg 122  Q
    |||||||| |  |||||||||||    
T  32798300 agatttagctactcattgtcatg 32798322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 45023011 - 45023133
Alignment:
Q  1 agaataacttcaatatcatgtaaattgctagaatcatatattacaagattaaaagattacattctaagctca-atcaagtacctctaatcccaactaaag 99  Q
    |||||||| |||||||||  | || |||||||| ||||||||   |||| ||||||||||||  |||||| | |||||||||||||||||||||| || |    
T  45023011 agaataacatcaatatcaaatcaaatgctagaaccatatatttatagatcaaaagattacatgttaagctaagatcaagtacctctaatcccaacaaagg 45023110  T
Q  100 agatttagttcatcattgtcatg 122  Q
    |||||||| |  |||||||||||    
T  45023111 agatttagctactcattgtcatg 45023133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 31473735 - 31473880
Alignment:
Q  1 agaataacttcaatatcatgtaaattgctagaatcatatattacaagattaaaagattacattctaagctcaatcaagtacctctaatcccaactaaaga 100  Q
    |||||||  |||||||||  ||||  ||||||||||||||||  | ||| |||||||||||| ||| |||  |||||||||||||||||||||| ||  |    
T  31473735 agaataatctcaatatcaaataaaaagctagaatcatatatttaaggatcaaaagattacatgctaggcttgatcaagtacctctaatcccaacaaagta 31473834  T
Q  101 gatttagttcatcattgtcatgagaacattacaaaagtggaagaaa 146  Q
    ||||||| |  ||||| |||||  | | |||||||| |||||||||    
T  31473835 gatttagctactcattatcatggtagctttacaaaaatggaagaaa 31473880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 13249192 - 13249346
Alignment:
Q  1 agaataacttcaatatcatgtaaattgctagaatcatatattacaagattaaaagattacattctaagctcaatcaagtacctctaatcccaactaaaga 100  Q
    |||||||  |||||||||  ||||  ||||||||||||||||| ||||  |||||||||||| ||| |||  |||||||||||||||| | ||| || ||    
T  13249192 agaataatctcaatatcaaataaagagctagaatcatatattaaaagaacaaaagattacatactaggcttgatcaagtacctctaat-ctaacaaagga 13249290  T
Q  101 gatttagttcatcattgtcatgagaacattacaaaagtggaagaaaagttgagaat 156  Q
    |||||||||  ||||| |||||| ||| || ||| | || | |||||| |||||||    
T  13249291 gatttagttactcattatcatgataaccttgcaagattgaaggaaaagatgagaat 13249346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 26621946 - 26622069
Alignment:
Q  1 agaataacttcaatatcatgtaaattgctagaatcatatattacaagattaaaagattacat-tctaagctca-atcaagtacctctaatcccaactaaa 98  Q
    |||||||| |||||||||  | || |||||||| ||||||||   |||| |||||||||||| | |||||| | |||||||||||||||||||||| ||     
T  26621946 agaataacatcaatatcaaatcaaatgctagaaccatatatttatagatcaaaagattacatgtttaagctaagatcaagtacctctaatcccaacaaag 26622045  T
Q  99 gagatttagttcatcattgtcatg 122  Q
    ||||||||| |  |||||||||||    
T  26622046 gagatttagctactcattgtcatg 26622069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 31072794 - 31072901
Alignment:
Q  1 agaataacttcaatatcatgtaaattgctagaatcatatattacaagattaaaagattacattctaagctca-atcaagtacctctaatcccaactaaag 99  Q
    |||||||| |||||||||  | || |||||||| ||||||||   |||| ||||||||||||  |||||| | |||||||||||||||||||||| || |    
T  31072794 agaataacatcaatatcaaatcaaatgctagaaccatatatttatagatcaaaagattacatgttaagctaagatcaagtacctctaatcccaacaaagg 31072893  T
Q  100 agatttag 107  Q
    ||||||||    
T  31072894 agatttag 31072901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 9869581 - 9869703
Alignment:
Q  1 agaataacttcaatatcatgtaaattgctagaatcatatattacaagattaaaagattacattctaagctca-atcaagtacctctaatcccaactaaag 99  Q
    |||||||| |||||||||  | || |||||||| ||||||||   |||| ||||||||||||  |||||| | |||||||||||||||||||||| || |    
T  9869581 agaataacatcaatatcaaatcaaatgctagaaccatatatttatagatcaaaagattacatgttaagctaagatcaagtacctctaatcccaacaaagg 9869680  T
Q  100 agatttagttcatcattgtcatg 122  Q
    |||||||  |  |||||||||||    
T  9869681 agatttaactactcattgtcatg 9869703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 26 - 122
Target Start/End: Original strand, 28996510 - 28996607
Alignment:
Q  26 tgctagaatcatatattacaagattaaaagattacattctaagctca-atcaagtacctctaatcccaactaaagagatttagttcatcattgtcatg 122  Q
    |||||||| ||||||||   |||| ||||||||||||  |||||| | |||||||||||||||||||||| || ||||||||| |  |||||||||||    
T  28996510 tgctagaaccatatatttatagatcaaaagattacatgttaagctaagatcaagtacctctaatcccaacaaaggagatttagctactcattgtcatg 28996607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 26 - 122
Target Start/End: Original strand, 29002226 - 29002323
Alignment:
Q  26 tgctagaatcatatattacaagattaaaagattacattctaagctca-atcaagtacctctaatcccaactaaagagatttagttcatcattgtcatg 122  Q
    |||||||| ||||||||   |||| ||||||||||||  |||||| | |||||||||||||||||||||| || ||||||||| |  |||||||||||    
T  29002226 tgctagaaccatatatttatagatcaaaagattacatgttaagctaagatcaagtacctctaatcccaacaaaggagatttagctactcattgtcatg 29002323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 41305266 - 41305158
Alignment:
Q  1 agaataacttcaatatcatgtaaattgctagaatcatatattacaagattaaaagattacat-tctaagctca-atcaagtacctctaatcccaactaaa 98  Q
    |||||||| |||||||||  | || |||||||| ||||||||   |||| |||||||||||| | |||||| | |||||||||||||||||||||| ||     
T  41305266 agaataacatcaatatcaaatcaaatgctagaaccatatatttatagatcaaaagattacatgtttaagctaagatcaagtacctctaatcccaacaaag 41305167  T
Q  99 gagatttag 107  Q
    |||||||||    
T  41305166 gagatttag 41305158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 44241833 - 44241953
Alignment:
Q  1 agaataacttcaatatcatgtaaattgctagaatcatatattacaagattaaaagattacattctaagctca-atcaagtacctctaatcccaactaaag 99  Q
    |||||||| |||||||||  |||  |||||||| ||||||||   |||| ||||||||||||  |||||| | |||||||||||||||||||||| |  |    
T  44241833 agaataacatcaatatcaaataa--tgctagaaccatatatttatagatcaaaagattacatgttaagctaagatcaagtacctctaatcccaacaatgg 44241930  T
Q  100 agatttagttcatcattgtcatg 122  Q
    |||||||| |  |||||||||||    
T  44241931 agatttagctactcattgtcatg 44241953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 11913008 - 11912886
Alignment:
Q  1 agaataacttcaatatcatgtaaattgctagaatcatatattacaagattaaaagattacattctaagctca-atcaagtacctctaatcccaactaaag 99  Q
    |||||||| |||||||||  | || |||||||||||||||||   | || ||||||||||||  | |||| | ||||||||||||||||| |||| || |    
T  11913008 agaataacatcaatatcaaatcaaatgctagaatcatatatttataaatcaaaagattacatgtttagctaagatcaagtacctctaatctcaacaaagg 11912909  T
Q  100 agatttagttcatcattgtcatg 122  Q
    |||||||| |  |||||||||||    
T  11912908 agatttagctactcattgtcatg 11912886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 30660316 - 30660422
Alignment:
Q  1 agaataacttcaatatcatgtaaattgctagaatcatatattacaagattaaaagattacattctaagctcaatcaagtacctctaatcccaactaaaga 100  Q
    |||||||  |||||||||  ||||  ||||||||||||||||| | ||| |||||||||||   || |||  |||||||| || |||||||||| || ||    
T  30660316 agaataatctcaatatcaaataaagagctagaatcatatattaaaggatcaaaagattacacaataggcttgatcaagtatctttaatcccaacaaagga 30660415  T
Q  101 gatttag 107  Q
    |||||||    
T  30660416 gatttag 30660422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 35085482 - 35085604
Alignment:
Q  1 agaataacttcaatatcatgtaaattgctagaatcatatattacaagattaaaagattacattctaagctca-atcaagtacctctaatcccaactaaag 99  Q
    |||||||| |||||||||  | || ||||| || ||||||||   |||| ||||||||||||  |||||| | ||||||||||| |||||| ||| || |    
T  35085482 agaataacatcaatatcaaatcaaatgctataaccatatatttatagatcaaaagattacatgttaagctaagatcaagtacctttaatcctaacaaagg 35085581  T
Q  100 agatttagttcatcattgtcatg 122  Q
    |||||||| |  |||||||||||    
T  35085582 agatttaggtactcattgtcatg 35085604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 39053084 - 39052962
Alignment:
Q  1 agaataacttcaatatcatgtaaattgctagaatcatatattacaagattaaaagattacattctaagctca-atcaagtacctctaatcccaactaaag 99  Q
    |||||||| |||||||||  | || |||||||| ||||||||   |||| ||| ||||||||  ||| ||   |||||||||||||||||||||| || |    
T  39053084 agaataacatcaatatcaaatcaaatgctagaaccatatatttatagatcaaaggattacatgttaaactatgatcaagtacctctaatcccaacaaagg 39052985  T
Q  100 agatttagttcatcattgtcatg 122  Q
    |||||||| |  |||||||||||    
T  39052984 agatttagctactcattgtcatg 39052962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 39059456 - 39059334
Alignment:
Q  1 agaataacttcaatatcatgtaaattgctagaatcatatattacaagattaaaagattacattctaagctca-atcaagtacctctaatcccaactaaag 99  Q
    |||||||| |||||||||  | || |||||||| ||||||||   |||| ||| ||||||||  ||| ||   |||||||||||||||||||||| || |    
T  39059456 agaataacatcaatatcaaatcaaatgctagaaccatatatttatagatcaaaggattacatgttaaactatgatcaagtacctctaatcccaacaaagg 39059357  T
Q  100 agatttagttcatcattgtcatg 122  Q
    |||||||| |  |||||||||||    
T  39059356 agatttagctactcattgtcatg 39059334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 45016257 - 45016379
Alignment:
Q  1 agaataacttcaatatcatgtaaattgctagaatcatatattacaagattaaaagattacattctaagctca-atcaagtacctctaatcccaactaaag 99  Q
    |||||||| |||||||||  | || |||||||| ||||||||   |||| ||| ||||||||  ||| ||   |||||||||||||||||||||| || |    
T  45016257 agaataacctcaatatcaattcaaatgctagaaccatatatttatagatcaaacgattacatgttaaactatgatcaagtacctctaatcccaacaaagg 45016356  T
Q  100 agatttagttcatcattgtcatg 122  Q
    |||||||| |  |||||||||||    
T  45016357 agatttagctactcattgtcatg 45016379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 173; Significance: 3e-93; HSPs: 24)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 173; E-Value: 3e-93
Query Start/End: Original strand, 1 - 197
Target Start/End: Original strand, 41456082 - 41456278
Alignment:
Q  1 agaataacttcaatatcatgtaaattgctagaatcatatattacaagattaaaagattacattctaagctcaatcaagtacctctaatcccaactaaaga 100  Q
    ||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||    
T  41456082 agaataatttcaatatcatgtaaattgctagaattatatattacaagattaaaagattacattctaagctcaatcaagtacctctaatcccaacgaagga 41456181  T
Q  101 gatttagttcatcattgtcatgagaacattacaaaagtggaagaaaagttgagaatccatgcaaggaacttgatttctccaagaatcttgatgaatc 197  Q
    ||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41456182 gatttagttcatcattgtcatgagaacattacaaacgtggaaggaaagttgagaatccatgcaaggaacttgatttctccaagaatcttgatgaatc 41456278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 161; E-Value: 5e-86
Query Start/End: Original strand, 1 - 197
Target Start/End: Original strand, 36842264 - 36842460
Alignment:
Q  1 agaataacttcaatatcatgtaaattgctagaatcatatattacaagattaaaagattacattctaagctcaatcaagtacctctaatcccaactaaaga 100  Q
    |||||||||| ||||||||||||||||||||||||||||| |||||||| ||||||||||||| ||||||||||||||||||||||||||||||||| ||    
T  36842264 agaataactttaatatcatgtaaattgctagaatcatataatacaagatcaaaagattacattttaagctcaatcaagtacctctaatcccaactaagga 36842363  T
Q  101 gatttagttcatcattgtcatgagaacattacaaaagtggaagaaaagttgagaatccatgcaaggaacttgatttctccaagaatcttgatgaatc 197  Q
    ||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||| | ||||||||||||||||||||||||||||||||    
T  36842364 gatttagttcatcattgtcatgagaactttacaaaagtggaaggaaagttgagaatccatgccaagaacttgatttctccaagaatcttgatgaatc 36842460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 1 - 197
Target Start/End: Original strand, 17863959 - 17864155
Alignment:
Q  1 agaataacttcaatatcatgtaaattgctagaatcatatattacaagattaaaagattacattctaagctcaatcaagtacctctaatcccaactaaaga 100  Q
    |||||||  |||||||||  ||||||||||||||||||||||  ||||  |||||||||||||||||||| ||||||||||||||||||||||| || ||    
T  17863959 agaataaactcaatatcacataaattgctagaatcatatatttaaagaacaaaagattacattctaagcttaatcaagtacctctaatcccaacaaagga 17864058  T
Q  101 gatttagttcatcattgtcatgagaacattacaaaagtggaagaaaagttgagaatccatgcaaggaacttgatttctccaagaatcttgatgaatc 197  Q
    ||||||| | ||||||||||||| |||||||||||||||||||||||| |||  |||| ||| | || ||||||||||| |||  ||||||||||||    
T  17864059 gatttagctgatcattgtcatgataacattacaaaagtggaagaaaagatgaagatccgtgccaagagcttgatttctcaaaggttcttgatgaatc 17864155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 1 - 189
Target Start/End: Complemental strand, 37439280 - 37439092
Alignment:
Q  1 agaataacttcaatatcatgtaaattgctagaatcatatattacaagattaaaagattacattctaagctcaatcaagtacctctaatcccaactaaaga 100  Q
    |||||||  |||||||||||||||||||||||||||||||||  ||||| ||||||||||||||||||||  |||||||||||||||||||||| || ||    
T  37439280 agaataaactcaatatcatgtaaattgctagaatcatatattcaaagatcaaaagattacattctaagcttgatcaagtacctctaatcccaacaaagga 37439181  T
Q  101 gatttagttcatcattgtcatgagaacattacaaaagtggaagaaaagttgagaatccatgcaaggaacttgatttctccaagaatctt 189  Q
    ||||||||| ||||||||||||| |||  ||||||||||||||||||| |||  |||||||| | ||  |||||||||| |||| ||||    
T  37439180 gatttagttgatcattgtcatgataaccatacaaaagtggaagaaaagatgaagatccatgctaagagattgatttctcaaagattctt 37439092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 24852773 - 24852629
Alignment:
Q  1 agaataacttcaatatcatgtaaattgctagaatcatatatt-acaagattaaaagattacattctaagctcaatcaagtacctctaatcccaactaaag 99  Q
    |||||||  |||||||||  ||||| |||||||||||||||| | ||||| |||||||||||| |||||||  ||||||||||| |||| ||||| || |    
T  24852773 agaataaactcaatatcacataaatagctagaatcatatatttaaaagatcaaaagattacat-ctaagcttgatcaagtacctgtaattccaacaaagg 24852675  T
Q  100 agatttagttcatcattgtcatgagaacattacaaaagtggaagaaaag 148  Q
    ||| |||  | |||||   ||||| ||||||||||||||||||||||||    
T  24852674 agagttaaatgatcat---catgataacattacaaaagtggaagaaaag 24852629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 15853026 - 15853148
Alignment:
Q  1 agaataacttcaatatcatgtaaattgctagaatcatatattacaagattaaaagattacattctaagctca-atcaagtacctctaatcccaactaaag 99  Q
    |||||||| |||||||||  | || |||||||| ||||||||   |||| ||||||||||||  |||||| | |||||||||||||||||||||| || |    
T  15853026 agaataacatcaatatcaaatcaaatgctagaaccatatatttatagatcaaaagattacatgttaagctaagatcaagtacctctaatcccaacaaagg 15853125  T
Q  100 agatttagttcatcattgtcatg 122  Q
    |||||||| |  |||||||||||    
T  15853126 agatttagctactcattgtcatg 15853148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 29485371 - 29485493
Alignment:
Q  1 agaataacttcaatatcatgtaaattgctagaatcatatattacaagattaaaagattacattctaagctca-atcaagtacctctaatcccaactaaag 99  Q
    |||||||| |||||||||  | || |||||||| ||||||||   |||| ||||||||||||  |||||| | |||||||||||||||||||||| || |    
T  29485371 agaataacatcaatatcaaatcaaatgctagaaccatatatttatagatcaaaagattacatgttaagctaagatcaagtacctctaatcccaacaaagg 29485470  T
Q  100 agatttagttcatcattgtcatg 122  Q
    |||||||| |  |||||||||||    
T  29485471 agatttagctactcattgtcatg 29485493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 42931118 - 42930996
Alignment:
Q  1 agaataacttcaatatcatgtaaattgctagaatcatatattacaagattaaaagattacattctaagctca-atcaagtacctctaatcccaactaaag 99  Q
    |||||||| |||||||||  | || |||||||| ||||||||   |||| ||||||||||||  |||||| | |||||||||||||||||||||| || |    
T  42931118 agaataacatcaatatcaaatcaaatgctagaaccatatatttatagatcaaaagattacatgttaagctaagatcaagtacctctaatcccaacaaagg 42931019  T
Q  100 agatttagttcatcattgtcatg 122  Q
    |||||||| |  |||||||||||    
T  42931018 agatttagctactcattgtcatg 42930996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 45012459 - 45012581
Alignment:
Q  1 agaataacttcaatatcatgtaaattgctagaatcatatattacaagattaaaagattacattctaagctca-atcaagtacctctaatcccaactaaag 99  Q
    |||||||| |||||||||  | || |||||||| ||||||||   |||| ||||||||||||  |||||| | |||||||||||||||||||||| || |    
T  45012459 agaataacatcaatatcaaatcaaatgctagaaccatatatttatagatcaaaagattacatgttaagctaagatcaagtacctctaatcccaacaaagg 45012558  T
Q  100 agatttagttcatcattgtcatg 122  Q
    |||||||| |  |||||||||||    
T  45012559 agatttagctactcattgtcatg 45012581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 2021194 - 2021072
Alignment:
Q  1 agaataacttcaatatcatgtaaattgctagaatcatatattacaagattaaaagattacattctaagctca-atcaagtacctctaatcccaactaaag 99  Q
    |||||||| |||||||||  | || ||||| || ||||||||   |||| ||||||||||||  |||||| | |||||||||||||||||||||| || |    
T  2021194 agaataacatcaatatcaaatcaaatgctataaccatatatttatagatcaaaagattacatgttaagctaagatcaagtacctctaatcccaacaaagg 2021095  T
Q  100 agatttagttcatcattgtcatg 122  Q
    |||||||| |  |||||||||||    
T  2021094 agatttagctactcattgtcatg 2021072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 21331740 - 21331618
Alignment:
Q  1 agaataacttcaatatcatgtaaattgctagaatcatatattacaagattaaaagattacattctaagctca-atcaagtacctctaatcccaactaaag 99  Q
    |||||||| |||||||||  | || |||||||| ||||||||   |||| ||||||||||||  |||||| | |||||||||||||||||||||| || |    
T  21331740 agaataacatcaatatcaaatcaaatgctagaaccatatatttatagatcaaaagattacatgttaagctaagatcaagtacctctaatcccaacaaagg 21331641  T
Q  100 agatttagttcatcattgtcatg 122  Q
    | |||||| |  |||||||||||    
T  21331640 atatttagctactcattgtcatg 21331618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 21341672 - 21341550
Alignment:
Q  1 agaataacttcaatatcatgtaaattgctagaatcatatattacaagattaaaagattacattctaagctca-atcaagtacctctaatcccaactaaag 99  Q
    |||||||| |||||||||  | || |||||||| ||||||||   |||| ||||||||||||  |||||| | |||||||||||||||||||||| || |    
T  21341672 agaataacatcaatatcaaatcaaatgctagaaccatatatttatagatcaaaagattacatgttaagctaagatcaagtacctctaatcccaacaaagg 21341573  T
Q  100 agatttagttcatcattgtcatg 122  Q
    | |||||| |  |||||||||||    
T  21341572 atatttagctactcattgtcatg 21341550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 11909696 - 11909576
Alignment:
Q  1 agaataacttcaatatcatgtaaattgctagaatcatatattacaagattaaaagattacattctaagctcaatcaagtacctctaatcccaactaaaga 100  Q
    |||||||| |||||||||  | || |||||||||||||||||| ||||||||||||||| ||  | ||||  ||||||||||||  |||||||| |  ||    
T  11909696 agaataacctcaatatcaaatcaaatgctagaatcatatatta-aagattaaaagattaaatgtttagctagatcaagtacctccgatcccaacaatgga 11909598  T
Q  101 gatttagttcatcattgtcatg 122  Q
    ||||||| |  |||||||||||    
T  11909597 gatttagctactcattgtcatg 11909576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 43268335 - 43268458
Alignment:
Q  1 agaataacttcaatatcatgtaaattgctagaatcatatattacaagattaaaagattacat-tctaagctca-atcaagtacctctaatcccaactaaa 98  Q
    |||||||| |||||||||  | || |||||||| ||||||||   |||| |||||||||||| | ||||||   |||||||||||||||||||||| ||     
T  43268335 agaataacatcaatatcaaatcaaatgctagaaccatatatttatagatcaaaagattacatgtttaagctatgatcaagtacctctaatcccaacaaag 43268434  T
Q  99 gagatttagttcatcattgtcatg 122  Q
    ||||||||| |  |||||||||||    
T  43268435 gagatttagctactcattgtcatg 43268458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 16817076 - 16816954
Alignment:
Q  1 agaataacttcaatatcatgtaaattgctagaatcatatattacaagattaaaagattacattctaagctca-atcaagtacctctaatcccaactaaag 99  Q
    |||||||| |||||||||  | || |||||||| ||||||||   |||| ||||  ||||||  |||||| | |||||||||||||||||||||| || |    
T  16817076 agaataacatcaatatcaaatcaaatgctagaaccatatatttatagatcaaaaagttacatgttaagctaagatcaagtacctctaatcccaacaaagg 16816977  T
Q  100 agatttagttcatcattgtcatg 122  Q
    |||||||| |  |||||||||||    
T  16816976 agatttagctactcattgtcatg 16816954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 16856233 - 16856111
Alignment:
Q  1 agaataacttcaatatcatgtaaattgctagaatcatatattacaagattaaaagattacattctaagctca-atcaagtacctctaatcccaactaaag 99  Q
    |||||||| |||||||||  | || |||||||| ||||||||   |||| ||||  ||||||  |||||| | |||||||||||||||||||||| || |    
T  16856233 agaataacatcaatatcaaatcaaatgctagaaccatatatttatagatcaaaaagttacatgttaagctaagatcaagtacctctaatcccaacaaagg 16856134  T
Q  100 agatttagttcatcattgtcatg 122  Q
    |||||||| |  |||||||||||    
T  16856133 agatttagctactcattgtcatg 16856111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 36781930 - 36781808
Alignment:
Q  1 agaataacttcaatatcatgtaaattgctagaatcatatattacaagattaaaagattacattctaagctca-atcaagtacctctaatcccaactaaag 99  Q
    |||||||| |||||||||  | || |||||||| ||||||||   |||| ||||||||||||  ||| ||   |||||||||||||||||||||| || |    
T  36781930 agaataacatcaatatcaaatcaaatgctagaaccatatatttatagatcaaaagattacatgttaaactatgatcaagtacctctaatcccaacaaagg 36781831  T
Q  100 agatttagttcatcattgtcatg 122  Q
    |||||||| |  |||||||||||    
T  36781830 agatttagctactcattgtcatg 36781808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 21067703 - 21067580
Alignment:
Q  1 agaataacttcaatatcatgtaaattgctagaatcatatattacaagattaaaagattacat-tctaagctca-atcaagtacctctaatcccaactaaa 98  Q
    |||||||| |||||||||  | || |||||||| ||||||||   |||| |||| ||||||| | |||||| | ||||| |||||||||||||||| ||     
T  21067703 agaataacatcaatatcaaatcaaatgctagaaccatatatttatagatcaaaatattacatgtttaagctaagatcaaatacctctaatcccaacaaag 21067604  T
Q  99 gagatttagttcatcattgtcatg 122  Q
    ||||||||| |  |||||||||||    
T  21067603 gagatttagctactcattgtcatg 21067580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 10 - 148
Target Start/End: Complemental strand, 34745027 - 34744888
Alignment:
Q  10 tcaatatcatgtaaattgctagaatcatatattacaagattaaaagat-tacattctaagctcaatcaagtacctctaatcccaactaaagagatttagt 108  Q
    ||||||||| |||||   |||||||||||||||  | ||| ||||||  ||||| ||| |||  ||||||||| |||||||||||| || |||||||||     
T  34745027 tcaatatcaagtaaaagactagaatcatatatttaaggatcaaaagaaatacatactatgcttgatcaagtacatctaatcccaacaaaggagatttagc 34744928  T
Q  109 tcatcattgtcatgagaacattacaaaagtggaagaaaag 148  Q
    |  |||||||||||  |   |||||||| |||||||||||    
T  34744927 tactcattgtcatggtagttttacaaaaatggaagaaaag 34744888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 2158088 - 2158210
Alignment:
Q  1 agaataacttcaatatcatgtaaattgctagaatcatatattacaagattaaaagattacattctaagctca-atcaagtacctctaatcccaactaaag 99  Q
    |||||||| |||||||||  | || |||||||| ||||||||   |||| ||| ||||||||  ||| ||   |||||||||||||||||||||| || |    
T  2158088 agaataacctcaatatcaattcaaatgctagaaccatatatttatagatcaaacgattacatgttaaactatgatcaagtacctctaatcccaacaaagg 2158187  T
Q  100 agatttagttcatcattgtcatg 122  Q
    |||||||| |  |||||||||||    
T  2158188 agatttagctactcattgtcatg 2158210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 2164504 - 2164626
Alignment:
Q  1 agaataacttcaatatcatgtaaattgctagaatcatatattacaagattaaaagattacattctaagctca-atcaagtacctctaatcccaactaaag 99  Q
    |||||||| |||||||||  | || |||||||| ||||||||   |||| ||| ||||||||  ||| ||   |||||||||||||||||||||| || |    
T  2164504 agaataacctcaatatcaattcaaatgctagaaccatatatttatagatcaaacgattacatgttaaactatgatcaagtacctctaatcccaacaaagg 2164603  T
Q  100 agatttagttcatcattgtcatg 122  Q
    |||||||| |  |||||||||||    
T  2164604 agatttagctactcattgtcatg 2164626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 12951272 - 12951394
Alignment:
Q  1 agaataacttcaatatcatgtaaattgctagaatcatatattacaagattaaaagattacattctaagctca-atcaagtacctctaatcccaactaaag 99  Q
    |||||||| |||||||||  | || |||||||| ||||||||   |||| ||| ||||||||  ||| ||   |||||||||||||||||||||| || |    
T  12951272 agaataacctcaatatcaattcaaatgctagaaccatatatttatagatcaaacgattacatgttaaactatgatcaagtacctctaatcccaacaaagg 12951371  T
Q  100 agatttagttcatcattgtcatg 122  Q
    |||||||| |  |||||||||||    
T  12951372 agatttagctactcattgtcatg 12951394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 13163294 - 13163414
Alignment:
Q  1 agaataacttcaatatcatgtaaattgctagaatcatatattacaagattaaaagattacattctaagctcaatcaagtacctctaatcccaactaaaga 100  Q
    |||||||  |||||||||  | || ||||| |||||||||||| | ||| ||||||||||||  |  |||  |||||||||||||||||||||| |  ||    
T  13163294 agaataatctcaatatcaaatcaaatgctacaatcatatattata-gatcaaaagattacatgttttgcttgatcaagtacctctaatcccaacaatgga 13163392  T
Q  101 gatttagttcatcattgtcatg 122  Q
    ||||||| |  |||||||||||    
T  13163393 gatttagctactcattgtcatg 13163414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 73 - 122
Target Start/End: Complemental strand, 13901628 - 13901579
Alignment:
Q  73 atcaagtacctctaatcccaactaaagagatttagttcatcattgtcatg 122  Q
    |||||||||||||||||||||| || ||||||||| |  |||||||||||    
T  13901628 atcaagtacctctaatcccaacaaaggagatttagctactcattgtcatg 13901579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 163; Significance: 3e-87; HSPs: 16)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 163; E-Value: 3e-87
Query Start/End: Original strand, 1 - 198
Target Start/End: Complemental strand, 13003553 - 13003355
Alignment:
Q  1 agaataacttcaatatcatgtaaattgctagaatcatatattacaagatt-aaaagattacattctaagctcaatcaagtacctctaatcccaactaaag 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |    
T  13003553 agaataacttcaatatcatgtaaattgctagaatcatatattacaagatttaaaagattacattctaagctcaatcaagtacctctaatcccaactaagg 13003454  T
Q  100 agatttagttcatcattgtcatgagaacattacaaaagtggaagaaaagttgagaatccatgcaaggaacttgatttctccaagaatcttgatgaatct 198  Q
    ||||||||||||||||||||||||||||||||||||| | | || |||||||||||| ||||||||||||||||||||||||||| |||||||||||||    
T  13003453 agatttagttcatcattgtcatgagaacattacaaaacttgcaggaaagttgagaatacatgcaaggaacttgatttctccaagattcttgatgaatct 13003355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 12 - 197
Target Start/End: Complemental strand, 52182903 - 52182717
Alignment:
Q  12 aatatcatgtaaattgctagaatcatatattacaagattaaaagattacattctaagc-tcaatcaagtacctctaatcccaactaaagagatttagttc 110  Q
    |||||||| |||||| |||||||||||||||  | ||| ||||||||||||||||||| | ||||||||||||||||||||||| || |||||||||||     
T  52182903 aatatcatctaaattactagaatcatatattcaaggatcaaaagattacattctaagccttaatcaagtacctctaatcccaacaaaggagatttagttg 52182804  T
Q  111 atcattgtcatgagaacattacaaaagtggaagaaaagttgagaatccatgcaaggaacttgatttctccaagaatcttgatgaatc 197  Q
    ||||||||||||| ||||||||||   ||||||||| | |||  || ||||| | || ||||||||||| |||  ||||||||||||    
T  52182803 atcattgtcatgataacattacaatcatggaagaaatggtgaagattcatgccaagatcttgatttctcaaagtttcttgatgaatc 52182717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 13594584 - 13594706
Alignment:
Q  1 agaataacttcaatatcatgtaaattgctagaatcatatattacaagattaaaagattacattctaagctca-atcaagtacctctaatcccaactaaag 99  Q
    |||||||| |||||||||  | || |||||||| ||||||||   |||| ||||||||||||  |||||| | |||||||||||||||||||||| || |    
T  13594584 agaataacatcaatatcaaatcaaatgctagaaccatatatttatagatcaaaagattacatgttaagctaagatcaagtacctctaatcccaacaaagg 13594683  T
Q  100 agatttagttcatcattgtcatg 122  Q
    |||||||| |  |||||||||||    
T  13594684 agatttagctactcattgtcatg 13594706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 17457331 - 17457453
Alignment:
Q  1 agaataacttcaatatcatgtaaattgctagaatcatatattacaagattaaaagattacattctaagctca-atcaagtacctctaatcccaactaaag 99  Q
    |||||||| |||||||||  | || |||||||| ||||||||   |||| ||||||||||||  |||||| | |||||||||||||||||||||| || |    
T  17457331 agaataacatcaatatcaaatcaaatgctagaaccatatatttatagatcaaaagattacatgttaagctaagatcaagtacctctaatcccaacaaagg 17457430  T
Q  100 agatttagttcatcattgtcatg 122  Q
    |||||||| |  |||||||||||    
T  17457431 agatttagctactcattgtcatg 17457453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 27590781 - 27590903
Alignment:
Q  1 agaataacttcaatatcatgtaaattgctagaatcatatattacaagattaaaagattacattctaagctca-atcaagtacctctaatcccaactaaag 99  Q
    |||||||| |||||||||  | || |||||||| ||||||||   |||| ||||||||||||  |||||| | |||||||||||||||||||||| || |    
T  27590781 agaataacatcaatatcaaatcaaatgctagaaccatatatttatagatcaaaagattacatgttaagctaagatcaagtacctctaatcccaacaaagg 27590880  T
Q  100 agatttagttcatcattgtcatg 122  Q
    |||||||| |  |||||||||||    
T  27590881 agatttagctactcattgtcatg 27590903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 30238705 - 30238827
Alignment:
Q  1 agaataacttcaatatcatgtaaattgctagaatcatatattacaagattaaaagattacattctaagctca-atcaagtacctctaatcccaactaaag 99  Q
    |||||||| |||||||||  | || |||||||| ||||||||   |||| ||||||||||||  |||||| | |||||||||||||||||||||| || |    
T  30238705 agaataacatcaatatcaaatcaaatgctagaaccatatatttatagatcaaaagattacatgttaagctaagatcaagtacctctaatcccaacaaagg 30238804  T
Q  100 agatttagttcatcattgtcatg 122  Q
    |||||||| |  |||||||||||    
T  30238805 agatttagctactcattgtcatg 30238827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 37356095 - 37355973
Alignment:
Q  1 agaataacttcaatatcatgtaaattgctagaatcatatattacaagattaaaagattacattctaagctca-atcaagtacctctaatcccaactaaag 99  Q
    |||||||| |||||||||  | || |||||||| ||||||||   |||| ||||||||||||  |||||| | |||||||||||||||||||||| || |    
T  37356095 agaataacatcaatatcaaatcaaatgctagaaccatatatttatagatcaaaagattacatgttaagctaagatcaagtacctctaatcccaacaaagg 37355996  T
Q  100 agatttagttcatcattgtcatg 122  Q
    |||||||| |  |||||||||||    
T  37355995 agatttagctactcattgtcatg 37355973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 37368061 - 37367939
Alignment:
Q  1 agaataacttcaatatcatgtaaattgctagaatcatatattacaagattaaaagattacattctaagctca-atcaagtacctctaatcccaactaaag 99  Q
    |||||||| |||||||||  | || |||||||| ||||||||   |||| ||||||||||||  |||||| | |||||||||||||||||||||| || |    
T  37368061 agaataacatcaatatcaaatcaaatgctagaaccatatatttatagatcaaaagattacatgttaagctaagatcaagtacctctaatcccaacaaagg 37367962  T
Q  100 agatttagttcatcattgtcatg 122  Q
    |||||||| |  |||||||||||    
T  37367961 agatttagctactcattgtcatg 37367939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 7780802 - 7780925
Alignment:
Q  1 agaataacttcaatatcatgtaaattgctagaatcatatattacaagattaaaagattacat-tctaagctca-atcaagtacctctaatcccaactaaa 98  Q
    |||||||| |||||||||  | || |||||||| ||||||||   |||| |||||||||||| | |||||| | |||||||||||||||||||||| ||     
T  7780802 agaataacatcaatatcaaatcaaatgctagaaccatatatttatagatcaaaagattacatgtttaagctaagatcaagtacctctaatcccaacaaag 7780901  T
Q  99 gagatttagttcatcattgtcatg 122  Q
    ||||||||| |  |||||||||||    
T  7780902 gagatttagctactcattgtcatg 7780925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 8104357 - 8104479
Alignment:
Q  1 agaataacttcaatatcatgtaaattgctagaatcatatattacaagattaaaagattacattctaagctca-atcaagtacctctaatcccaactaaag 99  Q
    |||||||| | |||||||  | || |||||||| ||||||||   |||| ||||||||||||  |||||| | |||||||||||||||||||||| || |    
T  8104357 agaataacattaatatcaaatcaaatgctagaaccatatatttatagatcaaaagattacatgttaagctaagatcaagtacctctaatcccaacaaagg 8104456  T
Q  100 agatttagttcatcattgtcatg 122  Q
    |||||||| |  |||||||||||    
T  8104457 agatttagctactcattgtcatg 8104479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 16405822 - 16405944
Alignment:
Q  1 agaataacttcaatatcatgtaaattgctagaatcatatattacaagattaaaagattacattctaagctca-atcaagtacctctaatcccaactaaag 99  Q
    |||||||| |||||||||  | || || || || ||||||||   |||||||||||||||||  |||||| | |||||||||||||||||||||| || |    
T  16405822 agaataacatcaatatcaaatcaaatgataaaaccatatatttatagattaaaagattacatgttaagctaagatcaagtacctctaatcccaacaaagg 16405921  T
Q  100 agatttagttcatcattgtcatg 122  Q
    |||||||| |  |||||||||||    
T  16405922 agatttagctactcattgtcatg 16405944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 49359060 - 49358955
Alignment:
Q  1 agaataacttcaatatcatgtaaattgctagaatcatatattacaagattaaaagattacattctaagctcaatcaagtacctctaatcccaactaaaga 100  Q
    |||||||  |||||||||  | || |||||||||||||||||| ||||| ||||||||||||  | ||||  |||||||||||||||||||||| |  ||    
T  49359060 agaataatatcaatatcaaatcaaatgctagaatcatatatta-aagatcaaaagattacatgtttagcttgatcaagtacctctaatcccaacaatgga 49358962  T
Q  101 gatttag 107  Q
    |||||||    
T  49358961 gatttag 49358955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 30211282 - 30211175
Alignment:
Q  1 agaataacttcaatatcatgtaaattgctagaatcatatattacaagattaaaagattacattctaagctca-atcaagtacctctaatcccaactaaag 99  Q
    |||||||| |||||||||  | || |||||||| ||||||||   |||| ||||||||||||  |||||| | |||||||||||||||||| ||| || |    
T  30211282 agaataacatcaatatcaaatcaaatgctagaaccatatatttatagatcaaaagattacatgttaagctaagatcaagtacctctaatccaaacaaagg 30211183  T
Q  100 agatttag 107  Q
    ||||||||    
T  30211182 agatttag 30211175  T

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Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 55462518 - 55462396
Alignment:
Q  1 agaataacttcaatatcatgtaaattgctagaatcatatattacaagattaaaagattacattctaagctca-atcaagtacctctaatcccaactaaag 99  Q
    |||||||| | |||||||  | || |||||||| ||||||||   |||| ||||||||||||  |||||| | |||| ||||||||||||||||| || |    
T  55462518 agaataacattaatatcaaatcaaatgctagaaccatatatttatagatcaaaagattacatgttaagctaagatcaggtacctctaatcccaacaaagg 55462419  T
Q  100 agatttagttcatcattgtcatg 122  Q
    |||||||| |  |||||||||||    
T  55462418 agatttagctactcattgtcatg 55462396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 5660295 - 5660173
Alignment:
Q  1 agaataacttcaatatcatgtaaattgctagaatcatatattacaagattaaaagattacattctaagctca-atcaagtacctctaatcccaactaaag 99  Q
    |||||||  |||||||||  | || |||||||| ||||||||   |||| ||||||||||||  | |||| | |||||||||||||||||||||| || |    
T  5660295 agaataatctcaatatcaaatcaaatgctagaaccatatatttatagatcaaaagattacatgtttagctaagatcaagtacctctaatcccaacaaagg 5660196  T
Q  100 agatttagttcatcattgtcatg 122  Q
    |||||||  |  |||||||||||    
T  5660195 agatttaactactcattgtcatg 5660173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 41373463 - 41373585
Alignment:
Q  1 agaataacttcaatatcatgtaaattgctagaatcatatattacaagattaaaagattacattctaagctca-atcaagtacctctaatcccaactaaag 99  Q
    |||||||| |||||||||  | || |||||||| ||||||||   |||| ||| ||||||||  ||| ||   |||||||||||||||||||||| || |    
T  41373463 agaataacctcaatatcaattcaaatgctagaaccatatatttatagatcaaacgattacatgttaaactatgatcaagtacctctaatcccaacaaagg 41373562  T
Q  100 agatttagttcatcattgtcatg 122  Q
    |||||||| |  |||||||||||    
T  41373563 agatttagctactcattgtcatg 41373585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0513 (Bit Score: 35; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0513
Description:

Target: scaffold0513; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 3 - 107
Target Start/End: Complemental strand, 11877 - 11771
Alignment:
Q  3 aataacttcaatatcatgtaaattgctagaatcatatattacaagattaaaagattacat-tctaagctca-atcaagtacctctaatcccaactaaaga 100  Q
    |||||| |||||||||  | || |||||||| ||||||||   |||| |||||||||||| | |||||| | |||||||||||||||||||||| || ||    
T  11877 aataacatcaatatcaattcaaatgctagaaccatatatttatagatcaaaagattacatgtttaagctaagatcaagtacctctaatcccaacaaagga 11778  T
Q  101 gatttag 107  Q
    |||||||    
T  11777 gatttag 11771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0343 (Bit Score: 35; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0343
Description:

Target: scaffold0343; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 3121 - 3243
Alignment:
Q  1 agaataacttcaatatcatgtaaattgctagaatcatatattacaagattaaaagattacattctaagctca-atcaagtacctctaatcccaactaaag 99  Q
    |||||||| |||||||||  | || | |||||| ||||||||   |||| ||||||||||||  |||||| | |||||||||||||||||||||| || |    
T  3121 agaataacatcaatatcaaatcaaatactagaaccatatatttttagatcaaaagattacatgttaagctaagatcaagtacctctaatcccaacaaagg 3220  T
Q  100 agatttagttcatcattgtcatg 122  Q
    |||||||  |  |||||||||||    
T  3221 agatttaactactcattgtcatg 3243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0510 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0510
Description:

Target: scaffold0510; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 8627 - 8504
Alignment:
Q  1 agaataacttcaatatcatgtaaattgctagaatcatatattacaagattaaaagattacat-tctaagctca-atcaagtacctctaatcccaactaaa 98  Q
    |||||||| |||||||||  | || |||||||| ||||||||   |||| ||| |||||||| | ||||||   |||||||||||||||||||||| ||     
T  8627 agaataacatcaatatcaaatcaaatgctagaaccatatatttatagatcaaaggattacatgtttaagctatgatcaagtacctctaatcccaacaaag 8528  T
Q  99 gagatttagttcatcattgtcatg 122  Q
    ||||||||| |  |||||||||||    
T  8527 gagatttagctactcattgtcatg 8504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 50166 - 50288
Alignment:
Q  1 agaataacttcaatatcatgtaaattgctagaatcatatattacaagattaaaagattacattctaagctca-atcaagtacctctaatcccaactaaag 99  Q
    |||||||| |||||||||  | || |||||||| ||||||||   |||| ||| ||||||||  ||| ||   |||||||||||||||||||||| || |    
T  50166 agaataacctcaatatcaattcaaatgctagaaccatatatttatagatcaaacgattacatgttaaactatgatcaagtacctctaatcccaacaaagg 50265  T
Q  100 agatttagttcatcattgtcatg 122  Q
    |||||||| |  |||||||||||    
T  50266 agatttagctactcattgtcatg 50288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 4751 - 4629
Alignment:
Q  1 agaataacttcaatatcatgtaaattgctagaatcatatattacaagattaaaagattacattctaagctca-atcaagtacctctaatcccaactaaag 99  Q
    |||||||| |||||||||  | || |||||||| ||||||||   |||| ||| ||||||||  ||| ||   |||||||||||||||||||||| || |    
T  4751 agaataacctcaatatcaattcaaatgctagaaccatatatttatagatcaaacgattacatgttaaactatgatcaagtacctctaatcccaacaaagg 4652  T
Q  100 agatttagttcatcattgtcatg 122  Q
    |||||||| |  |||||||||||    
T  4651 agatttagctactcattgtcatg 4629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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