View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20461_low_5 (Length: 256)

Name: NF20461_low_5
Description: NF20461
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20461_low_5
NF20461_low_5
[»] chr6 (59 HSPs)
chr6 (6-239)||(28786059-28786292)
chr6 (1-239)||(27698667-27698904)
chr6 (10-239)||(28792184-28792413)
chr6 (1-239)||(27718552-27718790)
chr6 (9-239)||(27725018-27725248)
chr6 (8-239)||(27611175-27611406)
chr6 (5-238)||(27229014-27229245)
chr6 (6-239)||(28780920-28781153)
chr6 (4-239)||(26802217-26802456)
chr6 (4-239)||(27604878-27605119)
chr6 (4-239)||(26655768-26656003)
chr6 (4-239)||(26761739-26761974)
chr6 (107-239)||(27531370-27531502)
chr6 (23-239)||(27338238-27338454)
chr6 (23-239)||(27398978-27399194)
chr6 (23-239)||(27678744-27678960)
chr6 (15-235)||(31284078-31284298)
chr6 (57-236)||(27593196-27593375)
chr6 (5-235)||(26823626-26823850)
chr6 (91-236)||(26884029-26884174)
chr6 (54-235)||(26622805-26622986)
chr6 (54-235)||(26728783-26728964)
chr6 (7-223)||(27427792-27428006)
chr6 (23-214)||(27706600-27706791)
chr6 (55-235)||(26861446-26861626)
chr6 (57-235)||(27677791-27677969)
chr6 (80-239)||(26646334-26646493)
chr6 (80-239)||(26752302-26752461)
chr6 (119-239)||(25481636-25481756)
chr6 (119-239)||(25579613-25579733)
chr6 (119-239)||(26055820-26055940)
chr6 (119-239)||(26075790-26075910)
chr6 (119-239)||(26048739-26048859)
chr6 (119-239)||(26069908-26070028)
chr6 (119-239)||(26142759-26142879)
chr6 (119-239)||(25538434-25538554)
chr6 (4-84)||(26055738-26055818)
chr6 (99-239)||(28234438-28234578)
chr6 (4-83)||(25481554-25481633)
chr6 (8-83)||(25538356-25538431)
chr6 (4-83)||(26048657-26048736)
chr6 (4-83)||(26069826-26069905)
chr6 (4-83)||(26075708-26075787)
chr6 (4-83)||(26142677-26142756)
chr6 (120-235)||(27214312-27214427)
chr6 (120-235)||(27234801-27234916)
chr6 (4-83)||(25579529-25579610)
chr6 (91-235)||(28325347-28325491)
chr6 (156-235)||(29825958-29826037)
chr6 (168-229)||(26848603-26848664)
chr6 (171-220)||(27665309-27665358)
chr6 (72-185)||(28098596-28098709)
chr6 (120-220)||(25071554-25071654)
chr6 (62-129)||(26018770-26018837)
chr6 (62-129)||(26139474-26139541)
chr6 (81-219)||(28185222-28185360)
chr6 (91-163)||(26342183-26342255)
chr6 (120-220)||(26635585-26635685)
chr6 (120-220)||(26741551-26741651)
[»] scaffold0349 (3 HSPs)
scaffold0349 (1-239)||(14528-14765)
scaffold0349 (9-239)||(3595-3825)
scaffold0349 (1-151)||(8062-8212)
[»] scaffold0277 (2 HSPs)
scaffold0277 (10-239)||(4844-5073)
scaffold0277 (6-239)||(13805-14038)
[»] scaffold1254 (1 HSPs)
scaffold1254 (23-239)||(90-306)
[»] scaffold0419 (1 HSPs)
scaffold0419 (23-239)||(7323-7539)
[»] chr4 (8 HSPs)
chr4 (12-218)||(18699581-18699787)
chr4 (12-218)||(18655658-18655864)
chr4 (12-235)||(18679731-18679954)
chr4 (12-235)||(18731668-18731891)
chr4 (52-235)||(18724249-18724432)
chr4 (7-223)||(17989226-17989440)
chr4 (7-223)||(18073549-18073763)
chr4 (129-219)||(5091147-5091237)
[»] chr1 (3 HSPs)
chr1 (28-238)||(28164523-28164733)
chr1 (31-217)||(28127862-28128042)
chr1 (52-235)||(268521-268704)
[»] scaffold0003 (1 HSPs)
scaffold0003 (7-223)||(59357-59571)
[»] chr8 (2 HSPs)
chr8 (63-235)||(29273947-29274119)
chr8 (102-236)||(31903728-31903862)
[»] scaffold0038 (2 HSPs)
scaffold0038 (99-239)||(34599-34739)
scaffold0038 (91-235)||(116662-116806)
[»] scaffold0019 (1 HSPs)
scaffold0019 (99-219)||(58475-58595)
[»] scaffold0713 (1 HSPs)
scaffold0713 (62-129)||(5915-5982)
[»] chr2 (1 HSPs)
chr2 (129-175)||(3279592-3279638)


Alignment Details
Target: chr6 (Bit Score: 214; Significance: 1e-117; HSPs: 59)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 6 - 239
Target Start/End: Original strand, 28786059 - 28786292
Alignment:
Q  6 actcattcatattctgcattctcaaactcttttttcatccaatttctctcaattcttatggctatacaatcaccttcctcatccacttcattttcctatg 105  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  28786059 actcattcatattctgaattctcaaactcttttttcatccaatttctctcaattcttatggctatacaatcaccttcctcatcctcttcattttcctatg 28786158  T
Q  106 gattcacttaccaagtgttcctcagttttaggggcactgacactcgccacggttttaccagaaatctctacaaggctcttactgacaagggaatccatac 205  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| | ||    
T  28786159 gattcacttaccaagtgttcctcagttttaggggcactgacactcgccacggttttaccggaaatctctacaaggctcttactgacaagggaatcaaaac 28786258  T
Q  206 cttcattgatgacaatgatcttcaaagaggagat 239  Q
    ||||||||||||||||||||||||||||||||||    
T  28786259 cttcattgatgacaatgatcttcaaagaggagat 28786292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 211; E-Value: 1e-116
Query Start/End: Original strand, 1 - 239
Target Start/End: Complemental strand, 27698904 - 27698667
Alignment:
Q  1 aatttactcattcatattctgcattctcaaactcttttttcatccaatttctctcaattcttatggctatacaatcaccttcctcatccacttcattttc 100  Q
    ||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  27698904 aatttactcattcatattctgcattctcaaactcttttt-catcctatttctctcaattctcatggctatacaatcaccttcctcatccacttcattttc 27698806  T
Q  101 ctatggattcacttaccaagtgttcctcagttttaggggcactgacactcgccacggttttaccagaaatctctacaaggctcttactgacaagggaatc 200  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||    
T  27698805 ctatggattcacttaccaagtgttcatcagttttaggggcactgacactcggcacggttttaccggaaatctctacaaggctcttactgacaagggaatc 27698706  T
Q  201 cataccttcattgatgacaatgatcttcaaagaggagat 239  Q
    |||||||||||||||||||||||||||||||||||||||    
T  27698705 cataccttcattgatgacaatgatcttcaaagaggagat 27698667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 10 - 239
Target Start/End: Original strand, 28792184 - 28792413
Alignment:
Q  10 attcatattctgcattctcaaactcttttttcatccaatttctctcaattcttatggctatacaatcaccttcctcatccacttcattttcctatggatt 109  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  28792184 attcatattctgaattctcaaactcttttttcatccaatttctctcaattcttatggctatacaatcaccttcctcatcctcttcattttcctatggatt 28792283  T
Q  110 cacttaccaagtgttcctcagttttaggggcactgacactcgccacggttttaccagaaatctctacaaggctcttactgacaagggaatccataccttc 209  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| | ||||||    
T  28792284 cacttaccaagtgttcctcagttttaggggcactgacactcgccacggttttaccggaaatctctacaaggctcttactgacaagggaatcaaaaccttc 28792383  T
Q  210 attgatgacaatgatcttcaaagaggagat 239  Q
    ||||||||||||||||||||||||||||||    
T  28792384 attgatgacaatgatcttcaaagaggagat 28792413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 1 - 239
Target Start/End: Complemental strand, 27718790 - 27718552
Alignment:
Q  1 aatttactcattcatattctgcattctcaaactcttttttcatccaatttctctcaattcttatggctatacaatcaccttcctcatccacttcattttc 100  Q
    |||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||| ||||||| ||    
T  27718790 aattcactcattcatattctgcattctcaaactcttttttcatcctatttctctcaattctcatggctatacaatcaccttcctcatcctcttcattctc 27718691  T
Q  101 ctatggattcacttaccaagtgttcctcagttttaggggcactgacactcgccacggttttaccagaaatctctacaaggctcttactgacaagggaatc 200  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| |||||||||||||||||||||||||||||||||||    
T  27718690 ccatggattcacttaccaagtgttcctcagttttaggggcactgacactcggcacagttttaccggaaatctctacaaggctcttactgacaagggaatc 27718591  T
Q  201 cataccttcattgatgacaatgatcttcaaagaggagat 239  Q
    |||||||||||||||||||||||||||||||||||||||    
T  27718590 cataccttcattgatgacaatgatcttcaaagaggagat 27718552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 9 - 239
Target Start/End: Complemental strand, 27725248 - 27725018
Alignment:
Q  9 cattcatattctgcattctcaaactcttttttcatccaatttctctcaattcttatggctatacaatcaccttcctcatccacttcattttcctatggat 108  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||| | ||||||||||||||||||||||||||| ||||||||||||||||||    
T  27725248 cattcatattctgcattctcaaactcttttttcatcctatttctctcaattgtcatggctatacaatcaccttcctcatcctcttcattttcctatggat 27725149  T
Q  109 tcacttaccaagtgttcctcagttttaggggcactgacactcgccacggttttaccagaaatctctacaaggctcttactgacaagggaatccatacctt 208  Q
    ||||||||||||||||||| ||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  27725148 tcacttaccaagtgttccttagttttaggggcactgacactcggcacggttttaccggaaatctctacaaggctcttactgacaagggaatccatacctt 27725049  T
Q  209 cattgatgacaatgatcttcaaagaggagat 239  Q
    |||||||||||||||||||||||||||||||    
T  27725048 cattgatgacaatgatcttcaaagaggagat 27725018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 8 - 239
Target Start/End: Complemental strand, 27611406 - 27611175
Alignment:
Q  8 tcattcatattctgcattctcaaactcttttttcatccaatttctctcaattcttatggctatacaatcaccttcctcatccacttcattttcctatgga 107  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||| |||| | ||||||| ||  |||||||||||||||||    
T  27611406 tcattcatattctgcattctcaaactcttttttcatccaatttctctcaattttcatggctatgcaattagcttcctcttcttcttcattttcctatgga 27611307  T
Q  108 ttcacttaccaagtgttcctcagttttaggggcactgacactcgccacggttttaccagaaatctctacaaggctcttactgacaagggaatccatacct 207  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  27611306 ttcacttaccaagtgttcctcagttttaggggcactgacactcgccacggttttaccggaaatctctacaaggctcttactgacaagggaatccatacct 27611207  T
Q  208 tcattgatgacaatgatcttcaaagaggagat 239  Q
    ||||||||||||||||||||| ||||||||||    
T  27611206 tcattgatgacaatgatcttccaagaggagat 27611175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 5 - 238
Target Start/End: Original strand, 27229014 - 27229245
Alignment:
Q  5 tactcattcatattctgcattctcaaactcttttttcatccaatttctctcaattcttatggctatacaatcaccttcctcatccacttcattttcctat 104  Q
    ||||||||||||||||||||||| ||||||||||  ||||||||||||||||| ||| ||||||||||||||||||||||| ||| |||||||||||| |    
T  27229014 tactcattcatattctgcattctaaaactctttt--catccaatttctctcaagtctcatggctatacaatcaccttcctcttcctcttcattttccttt 27229111  T
Q  105 ggattcacttaccaagtgttcctcagttttaggggcactgacactcgccacggttttaccagaaatctctacaaggctcttactgacaagggaatccata 204  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||| | |||||||||||||||||||||||||||||||||||||    
T  27229112 ggattcacttaccaagtgttccttagttttaggggcactgacactcggcacggttttaccggcaatctctacaaggctcttactgacaagggaatccata 27229211  T
Q  205 ccttcattgatgacaatgatcttcaaagaggaga 238  Q
    ||||||||||||||||||||||||||||||||||    
T  27229212 ccttcattgatgacaatgatcttcaaagaggaga 27229245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 6 - 239
Target Start/End: Original strand, 28780920 - 28781153
Alignment:
Q  6 actcattcatattctgcattctcaaactcttttttcatccaatttctctcaattcttatggctatacaatcaccttcctcatccacttcattttcctatg 105  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||| | |||||||| |||| ||||||||| ||| |||||||||||| ||    
T  28780920 actcattcatattctgaattctcaaactcttttttcatccaatttctctcaattatcatggctatgcaattaccttcctcttcctcttcattttcctctg 28781019  T
Q  106 gattcacttaccaagtgttcctcagttttaggggcactgacactcgccacggttttaccagaaatctctacaaggctcttactgacaagggaatccatac 205  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||| | ||    
T  28781020 cattcacttaccaagtgttcctcagttttaggggcactgacactcgccacggttttaccggcaatctctacaaggctcttactgacaagggaatcaaaac 28781119  T
Q  206 cttcattgatgacaatgatcttcaaagaggagat 239  Q
    ||||||||||||||||||||||||||||||||||    
T  28781120 cttcattgatgacaatgatcttcaaagaggagat 28781153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 4 - 239
Target Start/End: Original strand, 26802217 - 26802456
Alignment:
Q  4 ttactcattcatattctgcattctcaaactctttt----ttcatccaatttctctcaattcttatggctatacaatcaccttcctcatccacttcatttt 99  Q
    |||||||||||||||||||||||||||||||||||    ||||||||||||||| ||||| | |||||||| || || |||||||||||| |||||||||    
T  26802217 ttactcattcatattctgcattctcaaactcttttttttttcatccaatttctcacaattttcatggctatgcagtctccttcctcatcctcttcatttt 26802316  T
Q  100 cctatggattcacttaccaagtgttcctcagttttaggggcactgacactcgccacggttttaccagaaatctctacaaggctcttactgacaagggaat 199  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||  | ||||||||||||||||||| ||||||||||||    
T  26802317 cttatggattcacttaccaagtgttcctcagttttaggggcactgacactcggtacggttttacgggcaatctctacaaggctcttattgacaagggaat 26802416  T
Q  200 ccataccttcattgatgacaatgatcttcaaagaggagat 239  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  26802417 ccataccttcattgatgacaatgatcttcaaagaggagat 26802456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 4 - 239
Target Start/End: Complemental strand, 27605119 - 27604878
Alignment:
Q  4 ttactcattcatattctgcattctcaaactcttttttcatccaatttctctcaattcttatggctatacaatcaccttcctcatccac------ttcatt 97  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||| ||||||||||||| |      ||||||    
T  27605119 ttactcattcatattctgcattctcaaactcttttttcatccaatttctctcaattctcatggctatgcaattaccttcctcatcctcatcctcttcatt 27605020  T
Q  98 ttcctatggattcacttaccaagtgttcctcagttttaggggcactgacactcgccacggttttaccagaaatctctacaaggctcttactgacaaggga 197  Q
    |||||||| ||||||||||||||||||||| |||||||||||||||||||||||  ||||||||||| | ||||||||||||||||||||||||||||||    
T  27605019 ttcctatgcattcacttaccaagtgttccttagttttaggggcactgacactcgatacggttttaccggcaatctctacaaggctcttactgacaaggga 27604920  T
Q  198 atccataccttcattgatgacaatgatcttcaaagaggagat 239  Q
    || ||||||||||||||||| |||||||||| ||||||||||    
T  27604919 attcataccttcattgatgaaaatgatcttcgaagaggagat 27604878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 164; E-Value: 9e-88
Query Start/End: Original strand, 4 - 239
Target Start/End: Original strand, 26655768 - 26656003
Alignment:
Q  4 ttactcattcatattctgcattctcaaactcttttttcatccaatttctctcaattcttatggctatacaatcaccttcctcatccacttcattttccta 103  Q
    ||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||| |||||||||||||    
T  26655768 ttactcattcatattctgcattcccaaactcttttttcatccattttctctcaattctcatggctatacaatcaccttcctcatcctcttcattttccta 26655867  T
Q  104 tggattcacttaccaagtgttcctcagttttaggggcactgacactcgccacggttttaccagaaatctctacaaggctcttactgacaagggaatccat 203  Q
    ||| || |  |||||||||||||||||||||||||||| |||||| || |||||||||||| | ||||||||||||||||||| ||| ||||||||||||    
T  26655868 tgggtttaaataccaagtgttcctcagttttaggggcattgacacccggcacggttttaccggcaatctctacaaggctcttattgataagggaatccat 26655967  T
Q  204 accttcattgatgacaatgatcttcaaagaggagat 239  Q
    || ||||||||||||||||||||||  |||||||||    
T  26655968 actttcattgatgacaatgatcttctcagaggagat 26656003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 164; E-Value: 9e-88
Query Start/End: Original strand, 4 - 239
Target Start/End: Original strand, 26761739 - 26761974
Alignment:
Q  4 ttactcattcatattctgcattctcaaactcttttttcatccaatttctctcaattcttatggctatacaatcaccttcctcatccacttcattttccta 103  Q
    ||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||| |||||||||||||    
T  26761739 ttactcattcatattctgcattcccaaactcttttttcatccattttctctcaattctcatggctatacaatcaccttcctcatcctcttcattttccta 26761838  T
Q  104 tggattcacttaccaagtgttcctcagttttaggggcactgacactcgccacggttttaccagaaatctctacaaggctcttactgacaagggaatccat 203  Q
    ||| || |  |||||||||||||||||||||||||||| |||||| || |||||||||||| | ||||||||||||||||||| ||| ||||||||||||    
T  26761839 tgggtttaaataccaagtgttcctcagttttaggggcattgacacccggcacggttttaccggcaatctctacaaggctcttattgataagggaatccat 26761938  T
Q  204 accttcattgatgacaatgatcttcaaagaggagat 239  Q
    || ||||||||||||||||||||||  |||||||||    
T  26761939 actttcattgatgacaatgatcttctcagaggagat 26761974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 107 - 239
Target Start/End: Complemental strand, 27531502 - 27531370
Alignment:
Q  107 attcacttaccaagtgttcctcagttttaggggcactgacactcgccacggttttaccagaaatctctacaaggctcttactgacaagggaatccatacc 206  Q
    |||||||||||||||||||||||||||||||||| | ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||    
T  27531502 attcacttaccaagtgttcctcagttttaggggcgcggacactcgccacggttttaccggaaatctctacaaggctcttactgacaagggaatctatacc 27531403  T
Q  207 ttcattgatgacaatgatcttcaaagaggagat 239  Q
    |||||||||||||||||||||||||||||||||    
T  27531402 ttcattgatgacaatgatcttcaaagaggagat 27531370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 23 - 239
Target Start/End: Complemental strand, 27338454 - 27338238
Alignment:
Q  23 attctcaaactcttttttcatccaatttctctcaattcttatggctatacaatcaccttcctcatccacttcattttcctatggattcacttaccaagtg 122  Q
    ||||||||||| ||||||||||  ||||||||||||||| |||||||| ||||||| |||||| ||| ||||| |||||| ||| ||||  ||||| |||    
T  27338454 attctcaaacttttttttcatcttatttctctcaattctcatggctatgcaatcactttcctcttcctcttcaatttcctctgggttcaaataccatgtg 27338355  T
Q  123 ttcctcagttttaggggcactgacactcgccacggttttaccagaaatctctacaaggctcttactgacaagggaatccataccttcattgatgacaatg 222  Q
    |||||||||||||||| || ||||||||   ||||||||||| | ||||||||||||||||||| ||||||||||||| | ||||||||||||||||| |    
T  27338354 ttcctcagttttagggacattgacactctttacggttttaccggcaatctctacaaggctcttattgacaagggaatcaaaaccttcattgatgacaacg 27338255  T
Q  223 atcttcaaagaggagat 239  Q
    ||||| |||||||||||    
T  27338254 atcttgaaagaggagat 27338238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 23 - 239
Target Start/End: Complemental strand, 27399194 - 27398978
Alignment:
Q  23 attctcaaactcttttttcatccaatttctctcaattcttatggctatacaatcaccttcctcatccacttcattttcctatggattcacttaccaagtg 122  Q
    ||||||||||| ||||||||||  ||||||||||||||| |||||||| ||||||| |||||| ||| ||||| |||||| ||| ||||  ||||| |||    
T  27399194 attctcaaacttttttttcatcttatttctctcaattctcatggctatgcaatcactttcctcttcctcttcaatttcctctgggttcaaataccatgtg 27399095  T
Q  123 ttcctcagttttaggggcactgacactcgccacggttttaccagaaatctctacaaggctcttactgacaagggaatccataccttcattgatgacaatg 222  Q
    |||||||||||||||| || ||||||||   ||||||||||| | ||||||||||||||||||| ||||||||||||| | ||||||||||||||||| |    
T  27399094 ttcctcagttttagggacattgacactctttacggttttaccggcaatctctacaaggctcttattgacaagggaatcaaaaccttcattgatgacaacg 27398995  T
Q  223 atcttcaaagaggagat 239  Q
    ||||| |||||||||||    
T  27398994 atcttgaaagaggagat 27398978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 23 - 239
Target Start/End: Original strand, 27678744 - 27678960
Alignment:
Q  23 attctcaaactcttttttcatccaatttctctcaattcttatggctatacaatcaccttcctcatccacttcattttcctatggattcacttaccaagtg 122  Q
    |||||||||||||||||||||| ||||||||| || ||| |||||||| |||||||||||||| ||||||||| |||||||||  | ||  ||||||||     
T  27678744 attctcaaactcttttttcatctaatttctctaaaatctcatggctatgcaatcaccttcctcttccacttcaatttcctatgagtacaaataccaagta 27678843  T
Q  123 ttcctcagttttaggggcactgacactcgccacggttttaccagaaatctctacaaggctcttactgacaagggaatccataccttcattgatgacaatg 222  Q
    ||||||||||| || || | |||||||||  ||||||| ||| | ||||||||||||||||||||||||||||||||| | |||||||||||| | ||||    
T  27678844 ttcctcagtttcagaggaagtgacactcggtacggtttcaccgggaatctctacaaggctcttactgacaagggaatcaacaccttcattgataagaatg 27678943  T
Q  223 atcttcaaagaggagat 239  Q
     ||||||||||||||||    
T  27678944 gtcttcaaagaggagat 27678960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 15 - 235
Target Start/End: Original strand, 31284078 - 31284298
Alignment:
Q  15 tattctgcattctcaaactcttttttcatccaatttctctcaattcttatggctatacaatcaccttcctcatccacttcattttcctatggattcactt 114  Q
    ||||||||||||||||| ||||| ||||||||  ||||||||| ||| |||||||| |||||| ||||||| ||| ||||| ||||||||| |||||  |    
T  31284078 tattctgcattctcaaattctttcttcatccatattctctcaaatctcatggctatgcaatcatcttcctcttcctcttcaatttcctatgtattcaaat 31284177  T
Q  115 accaagtgttcctcagttttaggggcactgacactcgccacggttttaccagaaatctctacaaggctcttactgacaagggaatccataccttcattga 214  Q
    ||||||| ||||| ||||| ||||| | |||||||||  | ||||| ||| | ||||||||||||||||||||||||||||||||||| |||||||||||    
T  31284178 accaagtattccttagtttcaggggaagtgacactcggtatggtttcaccggcaatctctacaaggctcttactgacaagggaatccacaccttcattga 31284277  T
Q  215 tgacaatgatcttcaaagagg 235  Q
    ||| | ||| |||||||||||    
T  31284278 tgatagtgaacttcaaagagg 31284298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 57 - 236
Target Start/End: Complemental strand, 27593375 - 27593196
Alignment:
Q  57 attcttatggctatacaatcaccttcctcatccacttcattttcctatggattcacttaccaagtgttcctcagttttaggggcactgacactcgccacg 156  Q
    ||||| |||||||| |||||||||||||| ||||||||| |||||||||  | ||  |||||||| ||||||||||| || || | |||||||||  |||    
T  27593375 attctcatggctatgcaatcaccttcctcttccacttcaatttcctatgattacaaataccaagtattcctcagtttcagaggaagtgacactcggtacg 27593276  T
Q  157 gttttaccagaaatctctacaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttcaaagagga 236  Q
    |||| ||| | ||||||||||||||||||||||||||||||||| | ||||||||||||||||||| |||||||||||||    
T  27593275 gtttcaccggcaatctctacaaggctcttactgacaagggaatcaacaccttcattgatgacaatggtcttcaaagagga 27593196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 5 - 235
Target Start/End: Original strand, 26823626 - 26823850
Alignment:
Q  5 tactcattcatattctgcattctcaaactcttttttcatccaatttctctcaattcttatggctatacaatcaccttcctcatccacttcattttcctat 104  Q
    ||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||| |||||||| || ||| ||||||      ||||| |||| |||    
T  26823626 tactcattcatattctgcattctcaaactctttcttcgtccaatttctctcaattctcatggctatgcagtcaacttcct------cttcagtttcatat 26823719  T
Q  105 ggattcacttaccaagtgttcctcagttttaggggcactgacactcgccacggttttaccagaaatctctacaaggctcttactgacaagggaatccata 204  Q
    |  ||||  ||||||||||| ||||||||||| ||| ||||||||||  | |  |||||| | |||||||||||||||||||| |||||||||||||| |    
T  26823720 gatttcaaataccaagtgtttctcagttttagaggcgctgacactcggtatgaatttaccggcaatctctacaaggctcttacagacaagggaatccaca 26823819  T
Q  205 ccttcattgatgacaatgatcttcaaagagg 235  Q
    ||||  |||||||   ||| |||||||||||    
T  26823820 ccttttttgatgatcgtgaacttcaaagagg 26823850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 91 - 236
Target Start/End: Original strand, 26884029 - 26884174
Alignment:
Q  91 cttcattttcctatggattcacttaccaagtgttcctcagttttaggggcactgacactcgccacggttttaccagaaatctctacaaggctcttactga 190  Q
    ||||||||||||||||||||||||||||||||||||||||||| || || | |||||||||  | ||||| ||  ||||||||||||||||||||||| |    
T  26884029 cttcattttcctatggattcacttaccaagtgttcctcagtttcagaggaagtgacactcggtatggtttcactggaaatctctacaaggctcttactaa 26884128  T
Q  191 caagggaatccataccttcattgatgacaatgatcttcaaagagga 236  Q
    |||||||||||| |||||||||||||| ||| |||||| |||||||    
T  26884129 caagggaatccacaccttcattgatgataatcatcttccaagagga 26884174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 54 - 235
Target Start/End: Original strand, 26622805 - 26622986
Alignment:
Q  54 tcaattcttatggctatacaatcaccttcctcatccacttcattttcctatggattcacttaccaagtgttcctcagttttaggggcactgacactcgcc 153  Q
    |||||| | |||||||| |||||||| ||||| ||| ||||| ||||||||  |||||  |||||||||||||| ||||| || |||| |||||||||      
T  26622805 tcaattatcatggctatgcaatcaccatcctcttcctcttcaatttcctatcaattcaaataccaagtgttcctaagtttcagaggcagtgacactcggt 26622904  T
Q  154 acggttttaccagaaatctctacaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttcaaagagg 235  Q
    ||||||| ||  ||||||||||||||||||||||||||||||||||||| ||||||||||||||   ||| |||||||||||    
T  26622905 acggtttcactggaaatctctacaaggctcttactgacaagggaatccacaccttcattgatgatcgtgaacttcaaagagg 26622986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 54 - 235
Target Start/End: Original strand, 26728783 - 26728964
Alignment:
Q  54 tcaattcttatggctatacaatcaccttcctcatccacttcattttcctatggattcacttaccaagtgttcctcagttttaggggcactgacactcgcc 153  Q
    |||||| | |||||||| |||||||| ||||| ||| ||||| ||||||||  |||||  |||||||||||||| ||||| || |||| |||||||||      
T  26728783 tcaattatcatggctatgcaatcaccatcctcttcctcttcaatttcctatcaattcaaataccaagtgttcctaagtttcagaggcagtgacactcggt 26728882  T
Q  154 acggttttaccagaaatctctacaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttcaaagagg 235  Q
    ||||||| ||  ||||||||||||||||||||||||||||||||||||| ||||||||||||||   ||| |||||||||||    
T  26728883 acggtttcactggaaatctctacaaggctcttactgacaagggaatccacaccttcattgatgatcgtgaacttcaaagagg 26728964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 7 - 223
Target Start/End: Complemental strand, 27428006 - 27427792
Alignment:
Q  7 ctcattcatattctgcattctcaaactcttttttcatccaatttctctcaattcttatggctatacaatcaccttcctcatccacttcattttcctatgg 106  Q
    |||||||||||||||||||||||||||||| |  ||||  ||||||||||||||| ||||| || |||| ||||| ||  ||| |||||||||||||||     
T  27428006 ctcattcatattctgcattctcaaactcttct--catcttatttctctcaattctcatggccatgcaattacctttctattcctcttcattttcctatgc 27427909  T
Q  107 attcacttaccaagtgttcctcagttttaggggcactgacactcgccacggttttaccagaaatctctacaaggctcttactgacaagggaatccatacc 206  Q
    ||||| |||| | |||||||||| || || |||||| ||||||||  ||||||| ||| | |||||||  |||||||||| |||||||||||| | ||||    
T  27427908 attcagttacgatgtgttcctcatttgtaagggcaccgacactcggtacggtttcaccggcaatctcttgaaggctcttattgacaagggaattcgtacc 27427809  T
Q  207 ttcattgatgacaatga 223  Q
    |||  ||||||| ||||    
T  27427808 ttccatgatgacgatga 27427792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 23 - 214
Target Start/End: Complemental strand, 27706791 - 27706600
Alignment:
Q  23 attctcaaactcttttttcatccaatttctctcaattcttatggctatacaatcaccttcctcatccacttcattttcctatggattcacttaccaagtg 122  Q
    |||||||||||||||||||||| ||||||||| || ||| |||||||| |||||||||| ||| ||||||||| |||||||||  | ||  ||||||||     
T  27706791 attctcaaactcttttttcatctaatttctctaaaatctcatggctatgcaatcacctttctcttccacttcaatttcctatgagtacaaataccaagta 27706692  T
Q  123 ttcctcagttttaggggcactgacactcgccacggttttaccagaaatctctacaaggctcttactgacaagggaatccataccttcattga 214  Q
    ||||||||||| || ||   |||||||||  ||||||| ||  | ||||||||||||||| ||  ||||||||||||||| |||||||||||    
T  27706691 ttcctcagtttcagaggaggtgacactcggtacggtttcacaggcaatctctacaaggcttttgatgacaagggaatccacaccttcattga 27706600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 55 - 235
Target Start/End: Original strand, 26861446 - 26861626
Alignment:
Q  55 caattcttatggctatacaatcaccttcctcatccacttcattttcctatggattcacttaccaagtgttcctcagttttaggggcactgacactcgcca 154  Q
    ||||||| |||||||| |||||||||| ||| ||| ||||  |||||||||||||||  ||||| || ||||||||||| || || | |||||||||  |    
T  26861446 caattctgatggctatgcaatcaccttgctcttcctcttccatttcctatggattcaaataccaggtattcctcagtttcagaggaagtgacactcggta 26861545  T
Q  155 cggttttaccagaaatctctacaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttcaaagagg 235  Q
     ||||||||| | |||||||||||||||||||||||||||||||| || |||||||| |||||   ||| |||||||||||    
T  26861546 tggttttaccggtaatctctacaaggctcttactgacaagggaattcacaccttcatggatgatcgtgaacttcaaagagg 26861626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 57 - 235
Target Start/End: Complemental strand, 27677969 - 27677791
Alignment:
Q  57 attcttatggctatacaatcaccttcctcatccacttcattttcctatggattcacttaccaagtgttcctcagttttaggggcactgacactcgccacg 156  Q
    ||||| |||||||| |||||||||||||| ||||||||| |||||||||  | ||  |||||||| ||||||| ||| || || | |||||||||  |||    
T  27677969 attctcatggctatgcaatcaccttcctcttccacttcaatttcctatgagtacaaataccaagtattcctcaatttcagaggaagtgacactcggtacg 27677870  T
Q  157 gttttaccagaaatctctacaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttcaaagagg 235  Q
    |||| ||| | ||||||||||||||||||  ||||||||||||||| |||||||||||  |  |||| |||||||||||    
T  27677869 gtttcaccggcaatctctacaaggctcttgatgacaagggaatccacaccttcattgacaatcatgaacttcaaagagg 27677791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 80 - 239
Target Start/End: Original strand, 26646334 - 26646493
Alignment:
Q  80 ttcctcatccacttcattttcctatggattcacttaccaagtgttcctcagttttaggggcactgacactcgccacggttttaccagaaatctctacaag 179  Q
    |||||| ||| ||| | ||||||| |||||||| ||||| || |||||||  || ||||||| |||||||||  ||||||||||  || |||||||||||    
T  26646334 ttcctcttcctctttaatttcctacggattcacctaccaggtcttcctcaacttcaggggcagtgacactcgtgacggttttactggacatctctacaag 26646433  T
Q  180 gctcttactgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagat 239  Q
    |||||||||||||||||||| || ||||||||||||||   ||||||| | |||||||||    
T  26646434 gctcttactgacaagggaattcacaccttcattgatgattgtgatcttaagagaggagat 26646493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 80 - 239
Target Start/End: Original strand, 26752302 - 26752461
Alignment:
Q  80 ttcctcatccacttcattttcctatggattcacttaccaagtgttcctcagttttaggggcactgacactcgccacggttttaccagaaatctctacaag 179  Q
    |||||| ||| ||| | ||||||| |||||||| ||||| || |||||||  || ||||||| |||||||||  ||||||||||  || |||||||||||    
T  26752302 ttcctcttcctctttaatttcctacggattcacctaccaggtcttcctcaacttcaggggcagtgacactcgtgacggttttactggacatctctacaag 26752401  T
Q  180 gctcttactgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagat 239  Q
    |||||||||||||||||||| || ||||||||||||||   ||||||| | |||||||||    
T  26752402 gctcttactgacaagggaattcacaccttcattgatgattgtgatcttaagagaggagat 26752461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 119 - 239
Target Start/End: Original strand, 25481636 - 25481756
Alignment:
Q  119 agtgttcctcagttttaggggcactgacactcgccacggttttaccagaaatctctacaaggctcttactgacaagggaatccataccttcattgatgac 218  Q
    ||||||||||| ||| ||||||| |||||||||| ||  ||||||| | |||||||| |||||||||  |||||||||||| | ||| |||||||||||     
T  25481636 agtgttcctcaatttcaggggcagtgacactcgcaacaattttaccggtaatctctataaggctcttgttgacaagggaattcgtactttcattgatgaa 25481735  T
Q  219 aatgatcttcaaagaggagat 239  Q
    |||||||||||||||||||||    
T  25481736 aatgatcttcaaagaggagat 25481756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 119 - 239
Target Start/End: Original strand, 25579613 - 25579733
Alignment:
Q  119 agtgttcctcagttttaggggcactgacactcgccacggttttaccagaaatctctacaaggctcttactgacaagggaatccataccttcattgatgac 218  Q
    ||||||||||||||| || |||| |||||||||| ||  ||||||| | |||||||| |||||||||  |||||||||||| | ||||||| |||||||     
T  25579613 agtgttcctcagtttcagaggcagtgacactcgcaacacttttaccggtaatctctataaggctcttgttgacaagggaattcgtaccttctttgatgat 25579712  T
Q  219 aatgatcttcaaagaggagat 239  Q
    |||||||||||||||||||||    
T  25579713 aatgatcttcaaagaggagat 25579733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 119 - 239
Target Start/End: Original strand, 26055820 - 26055940
Alignment:
Q  119 agtgttcctcagttttaggggcactgacactcgccacggttttaccagaaatctctacaaggctcttactgacaagggaatccataccttcattgatgac 218  Q
    ||||||||||| ||| ||||||| |||||||||| ||  ||||||| | |||||||| |||||||||  ||||||||||||  |||| |||||||||||     
T  26055820 agtgttcctcattttcaggggcagtgacactcgcaacaattttaccggtaatctctataaggctcttgttgacaagggaattaatactttcattgatgaa 26055919  T
Q  219 aatgatcttcaaagaggagat 239  Q
    |||||||||||||||||||||    
T  26055920 aatgatcttcaaagaggagat 26055940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 119 - 239
Target Start/End: Original strand, 26075790 - 26075910
Alignment:
Q  119 agtgttcctcagttttaggggcactgacactcgccacggttttaccagaaatctctacaaggctcttactgacaagggaatccataccttcattgatgac 218  Q
    ||||||||||| ||| ||||||| |||||||||| ||  ||||||| | |||||||| |||||||||  ||||||||||||  |||| |||||||||||     
T  26075790 agtgttcctcaatttcaggggcagtgacactcgcaacaattttaccggtaatctctataaggctcttgttgacaagggaattaatactttcattgatgaa 26075889  T
Q  219 aatgatcttcaaagaggagat 239  Q
    |||||||||||||||||||||    
T  26075890 aatgatcttcaaagaggagat 26075910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 119 - 239
Target Start/End: Original strand, 26048739 - 26048859
Alignment:
Q  119 agtgttcctcagttttaggggcactgacactcgccacggttttaccagaaatctctacaaggctcttactgacaagggaatccataccttcattgatgac 218  Q
    ||||||||||||||| ||||||| |||||||||| ||  ||||||| | |||||||| |||||||| | ||||||||||||   ||| |||||||||||     
T  26048739 agtgttcctcagtttcaggggcagtgacactcgcaacaattttaccggtaatctctataaggctctcattgacaagggaatttgtactttcattgatgat 26048838  T
Q  219 aatgatcttcaaagaggagat 239  Q
    ||||||||| |||||||||||    
T  26048839 aatgatcttgaaagaggagat 26048859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 119 - 239
Target Start/End: Original strand, 26069908 - 26070028
Alignment:
Q  119 agtgttcctcagttttaggggcactgacactcgccacggttttaccagaaatctctacaaggctcttactgacaagggaatccataccttcattgatgac 218  Q
    ||||||||||||||| ||||||| |||||||||| ||  ||||||| | |||||||| |||||||| | ||||||||||||   ||| |||||||||||     
T  26069908 agtgttcctcagtttcaggggcagtgacactcgcaacaattttaccggtaatctctataaggctctcattgacaagggaatttgtactttcattgatgat 26070007  T
Q  219 aatgatcttcaaagaggagat 239  Q
    ||||||||| |||||||||||    
T  26070008 aatgatcttgaaagaggagat 26070028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 119 - 239
Target Start/End: Original strand, 26142759 - 26142879
Alignment:
Q  119 agtgttcctcagttttaggggcactgacactcgccacggttttaccagaaatctctacaaggctcttactgacaagggaatccataccttcattgatgac 218  Q
    ||||||||||||||| ||||||| |||||||||| ||   |||||| | |||||||| |||||||||  |||||||||||| | ||| |||||||||||     
T  26142759 agtgttcctcagtttcaggggcagtgacactcgcaacaaatttaccggtaatctctataaggctcttgttgacaagggaattcgtactttcattgatgat 26142858  T
Q  219 aatgatcttcaaagaggagat 239  Q
    ||||||||| |||||||||||    
T  26142859 aatgatcttgaaagaggagat 26142879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 119 - 239
Target Start/End: Original strand, 25538434 - 25538554
Alignment:
Q  119 agtgttcctcagttttaggggcactgacactcgccacggttttaccagaaatctctacaaggctcttactgacaagggaatccataccttcattgatgac 218  Q
    ||||||||||||||| ||||||| |||||||||| ||   |||||| | |||||||| |||||||||  ||||||||||||   ||| ||||| |||||     
T  25538434 agtgttcctcagtttcaggggcagtgacactcgcaacaaatttaccggtaatctctataaggctcttgttgacaagggaattagtactttcatagatgat 25538533  T
Q  219 aatgatcttcaaagaggagat 239  Q
    ||||||||| |||||||||||    
T  25538534 aatgatcttgaaagaggagat 25538554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 4 - 84
Target Start/End: Original strand, 26055738 - 26055818
Alignment:
Q  4 ttactcattcatattctgcattctcaaactcttttttcatccaatttctctcaattcttatggctatacaatcaccttcct 84  Q
    ||||||||||||||||| |||| ||||| ||||||||||||||  |||| |||||||| |||||||| |||||||||||||    
T  26055738 ttactcattcatattctccattttcaaagtcttttttcatccatattctttcaattctcatggctatgcaatcaccttcct 26055818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 99 - 239
Target Start/End: Original strand, 28234438 - 28234578
Alignment:
Q  99 tcctatggattcacttaccaagtgttcctcagttttaggggcactgacactcgccacggttttaccagaaatctctacaaggctcttactgacaagggaa 198  Q
    |||||||||||||| ||  | |||||||| |||||||| || | |||||||||| | |||||||||  ||||||||| |  ||||||  | |||||||||    
T  28234438 tcctatggattcacctatgacgtgttccttagttttagaggtagtgacactcgctatggttttaccgaaaatctctatagagctctttgtcacaagggaa 28234537  T
Q  199 tccataccttcattgatgacaatgatcttcaaagaggagat 239  Q
    |||| ||||||||||||||||  || |||||| ||||||||    
T  28234538 tccacaccttcattgatgacagggagcttcaaggaggagat 28234578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 4 - 83
Target Start/End: Original strand, 25481554 - 25481633
Alignment:
Q  4 ttactcattcatattctgcattctcaaactcttttttcatccaatttctctcaattcttatggctatacaatcaccttcc 83  Q
    ||||||||||||||||| |||| ||||| | ||||||||||||| |||| |||||||| |||||||| ||||||||||||    
T  25481554 ttactcattcatattctccattttcaaagttttttttcatccaaattctttcaattctcatggctatgcaatcaccttcc 25481633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 8 - 83
Target Start/End: Original strand, 25538356 - 25538431
Alignment:
Q  8 tcattcatattctgcattctcaaactcttttttcatccaatttctctcaattcttatggctatacaatcaccttcc 83  Q
    ||||||||||||| |||| ||||| ||||||||||||||| |||| |||||||| |||||||| ||||||||||||    
T  25538356 tcattcatattctccattttcaaagtcttttttcatccaaattctttcaattctcatggctatgcaatcaccttcc 25538431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 4 - 83
Target Start/End: Original strand, 26048657 - 26048736
Alignment:
Q  4 ttactcattcatattctgcattctcaaactcttttttcatccaatttctctcaattcttatggctatacaatcaccttcc 83  Q
    ||||||||||||||||| |||| ||||| ||||||||||||||  |||| |||||||| |||||||| ||||||||||||    
T  26048657 ttactcattcatattctccattttcaaagtcttttttcatccatattctttcaattctcatggctatgcaatcaccttcc 26048736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 4 - 83
Target Start/End: Original strand, 26069826 - 26069905
Alignment:
Q  4 ttactcattcatattctgcattctcaaactcttttttcatccaatttctctcaattcttatggctatacaatcaccttcc 83  Q
    ||||||||||||||||| |||| ||||| ||||||||||||||  |||| |||||||| |||||||| ||||||||||||    
T  26069826 ttactcattcatattctccattttcaaagtcttttttcatccatattctttcaattctcatggctatgcaatcaccttcc 26069905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 4 - 83
Target Start/End: Original strand, 26075708 - 26075787
Alignment:
Q  4 ttactcattcatattctgcattctcaaactcttttttcatccaatttctctcaattcttatggctatacaatcaccttcc 83  Q
    ||||||||||||||||| |||| ||||| ||||||||||||||  |||| |||||||| |||||||| ||||||||||||    
T  26075708 ttactcattcatattctccattttcaaagtcttttttcatccatattctttcaattctcatggctatgcaatcaccttcc 26075787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 4 - 83
Target Start/End: Original strand, 26142677 - 26142756
Alignment:
Q  4 ttactcattcatattctgcattctcaaactcttttttcatccaatttctctcaattcttatggctatacaatcaccttcc 83  Q
    ||||||||||||||||| |||| ||||| ||||||||||||||  |||| |||||||| |||||||| ||||||||||||    
T  26142677 ttactcattcatattctccattttcaaagtcttttttcatccatattctttcaattctcatggctatgcaatcaccttcc 26142756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 120 - 235
Target Start/End: Original strand, 27214312 - 27214427
Alignment:
Q  120 gtgttcctcagttttaggggcactgacactcgccacggttttaccagaaatctctacaaggctcttactgacaagggaatccataccttcattgatgaca 219  Q
    |||||| | ||||| ||||| || |||||||| |||||||| ||| | |||||||| || ||||||  |||||| |||||||  ||||||||||||||||    
T  27214312 gtgttcattagtttcaggggtaccgacactcgacacggtttcaccggtaatctctataaagctctttgtgacaaaggaatccgaaccttcattgatgaca 27214411  T
Q  220 atgatcttcaaagagg 235  Q
    | || ||||| |||||    
T  27214412 aggagcttcagagagg 27214427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 120 - 235
Target Start/End: Complemental strand, 27234916 - 27234801
Alignment:
Q  120 gtgttcctcagttttaggggcactgacactcgccacggttttaccagaaatctctacaaggctcttactgacaagggaatccataccttcattgatgaca 219  Q
    |||||| | ||||| ||||| || |||||||| |||||||| ||| | |||||||| || ||||||  |||||| |||||||  ||||||||||||||||    
T  27234916 gtgttcattagtttcaggggtaccgacactcgacacggtttcaccggtaatctctataaagctctttgtgacaaaggaatccgaaccttcattgatgaca 27234817  T
Q  220 atgatcttcaaagagg 235  Q
    | || ||||| |||||    
T  27234816 aggagcttcagagagg 27234801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 4 - 83
Target Start/End: Original strand, 25579529 - 25579610
Alignment:
Q  4 ttactcattcatattctgcattctcaaactcttttt--tcatccaatttctctcaattcttatggctatacaatcaccttcc 83  Q
    ||||||||||||||||| |||| ||||| | |||||  |||||||| |||| |||||||| |||||||| ||||||||||||    
T  25579529 ttactcattcatattctccattttcaaagtttttttattcatccaaattctttcaattctcatggctatgcaatcaccttcc 25579610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 91 - 235
Target Start/End: Original strand, 28325347 - 28325491
Alignment:
Q  91 cttcattttcctatggattcacttaccaagtgttcctcagttttaggggcactgacactcgccacggttttaccagaaatctctacaaggctcttactga 190  Q
    |||| ||||||||||||||||| ||  | |||||||| |||||||| || | |||||||||  | ||||||||  ||||||||||||| | ||||  |      
T  28325347 cttccttttcctatggattcacctatgacgtgttccttagttttagaggtagtgacactcgttatggttttactggaaatctctacaaagatctttgtag 28325446  T
Q  191 caagggaatccataccttcattgatgacaatgatcttcaaagagg 235  Q
     ||| |||| | |||||||||||||||||| || |||||| ||||    
T  28325447 gaagagaattcgtaccttcattgatgacaaagaccttcaacgagg 28325491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 156 - 235
Target Start/End: Original strand, 29825958 - 29826037
Alignment:
Q  156 ggttttaccagaaatctctacaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttcaaagagg 235  Q
    ||||||||| | ||||||||||| ||||| |||||||||  ||| |  ||||||||||||||||| || |||||||||||    
T  29825958 ggttttaccggcaatctctacaaagctctaactgacaagaaaattcgcaccttcattgatgacaaagagcttcaaagagg 29826037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 168 - 229
Target Start/End: Original strand, 26848603 - 26848664
Alignment:
Q  168 aatctctacaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttca 229  Q
    |||||||| || |||||| ||||||| |||||||  ||||||||||||||||| ||||||||    
T  26848603 aatctctataaagctctttctgacaatggaatccgaaccttcattgatgacaaggatcttca 26848664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 171 - 220
Target Start/End: Complemental strand, 27665358 - 27665309
Alignment:
Q  171 ctctacaaggctcttactgacaagggaatccataccttcattgatgacaa 220  Q
    ||||| ||||||||| ||||||| |||||||| |||||||||||||||||    
T  27665358 ctctataaggctctttctgacaaaggaatccacaccttcattgatgacaa 27665309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 72 - 185
Target Start/End: Complemental strand, 28098709 - 28098596
Alignment:
Q  72 caatcaccttcctcatccacttcattttcctatggattcacttaccaagtgttcctcagttttaggggcactgacactcgccacggttttaccagaaatc 171  Q
    |||||| ||||||| | | ||||||| || ||||||||||| ||  | ||||| || | |||||||||||| ||||||||  | ||||||||  ||||||    
T  28098709 caatcatcttcctctttctcttcattctcttatggattcacctatgacgtgtttcttaattttaggggcaccgacactcggtatggttttactggaaatc 28098610  T
Q  172 tctacaaggctctt 185  Q
    ||||||| ||||||    
T  28098609 tctacaaagctctt 28098596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 120 - 220
Target Start/End: Original strand, 25071554 - 25071654
Alignment:
Q  120 gtgttcctcagttttaggggcactgacactcgccacggttttaccagaaatctctacaaggctcttactgacaagggaatccataccttcattgatgaca 219  Q
    |||||| | ||||| ||||| || ||||||||   |||||||||| | ||||| || || |||||| ||||||| |||||||| ||||| ||||||||||    
T  25071554 gtgttcattagtttcaggggtaccgacactcgattcggttttaccggtaatctttataaagctctttctgacaaaggaatccacacctttattgatgaca 25071653  T
Q  220 a 220  Q
    |    
T  25071654 a 25071654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 62 - 129
Target Start/End: Complemental strand, 26018837 - 26018770
Alignment:
Q  62 tatggctatacaatcaccttcctcatccacttcattttcctatggattcacttaccaagtgttcctca 129  Q
    ||||||||| ||||||||||| ||  || | || |||||||||||| |||| ||||||||||||||||    
T  26018837 tatggctattcaatcaccttcgtctacctcatccttttcctatggactcacataccaagtgttcctca 26018770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 62 - 129
Target Start/End: Complemental strand, 26139541 - 26139474
Alignment:
Q  62 tatggctatacaatcaccttcctcatccacttcattttcctatggattcacttaccaagtgttcctca 129  Q
    ||||| ||| ||||||||||||||  || | || |||||||||||| |||| ||||||||||||||||    
T  26139541 tatggttattcaatcaccttcctctacctcatccttttcctatggactcacataccaagtgttcctca 26139474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 219
Target Start/End: Original strand, 28185222 - 28185360
Alignment:
Q  81 tcctcatccacttcattttcctatggattcacttaccaagtgttcctcagttttaggggcactgacactcgccacggttttaccagaaatctctacaagg 180  Q
    ||||||||| |||| || |||||||||||||| ||  | |||||||| || ||||| || | |||||||||  |  |||||||  |||||||| | |  |    
T  28185222 tcctcatcctcttccttctcctatggattcacctatgacgtgttccttagctttagaggtagtgacactcgttatcgttttactggaaatctcaatagag 28185321  T
Q  181 ctcttactgacaagggaatccataccttcattgatgaca 219  Q
    |||||  ||||||||||||||  |||||||| |||||||    
T  28185322 ctctttgtgacaagggaatccgaaccttcatggatgaca 28185360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 163
Target Start/End: Complemental strand, 26342255 - 26342183
Alignment:
Q  91 cttcattttcctatggattcacttaccaagtgttcctcagttttaggggcactgacactcgccacggttttac 163  Q
    ||||||| || ||||||||||| ||  | |||||||||| ||||||||||| || ||||||| | ||||||||    
T  26342255 cttcattctcatatggattcacatatgatgtgttcctcaattttaggggcattggcactcgctatggttttac 26342183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 220
Target Start/End: Original strand, 26635585 - 26635685
Alignment:
Q  120 gtgttcctcagttttaggggcactgacactcgccacggttttaccagaaatctctacaaggctcttactgacaagggaatccataccttcattgatgaca 219  Q
    |||||| | ||||| |||||||| |||||||    |||||| ||| | || ||||| || |||||| ||||||| |||||| | ||||||||||||||||    
T  26635585 gtgttcattagtttcaggggcaccgacactcaattcggtttcaccggtaacctctataaagctctttctgacaaaggaatcaacaccttcattgatgaca 26635684  T
Q  220 a 220  Q
    |    
T  26635685 a 26635685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 220
Target Start/End: Original strand, 26741551 - 26741651
Alignment:
Q  120 gtgttcctcagttttaggggcactgacactcgccacggttttaccagaaatctctacaaggctcttactgacaagggaatccataccttcattgatgaca 219  Q
    |||||| | ||||| |||||||| |||||||    |||||| ||| | || ||||| || |||||| ||||||| |||||| | ||||||||||||||||    
T  26741551 gtgttcattagtttcaggggcaccgacactcaattcggtttcaccggtaacctctataaagctctttctgacaaaggaatcaacaccttcattgatgaca 26741650  T
Q  220 a 220  Q
    |    
T  26741651 a 26741651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349 (Bit Score: 211; Significance: 1e-116; HSPs: 3)
Name: scaffold0349
Description:

Target: scaffold0349; HSP #1
Raw Score: 211; E-Value: 1e-116
Query Start/End: Original strand, 1 - 239
Target Start/End: Complemental strand, 14765 - 14528
Alignment:
Q  1 aatttactcattcatattctgcattctcaaactcttttttcatccaatttctctcaattcttatggctatacaatcaccttcctcatccacttcattttc 100  Q
    ||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  14765 aatttactcattcatattctgcattctcaaactcttttt-catcctatttctctcaattctcatggctatacaatcaccttcctcatccacttcattttc 14667  T
Q  101 ctatggattcacttaccaagtgttcctcagttttaggggcactgacactcgccacggttttaccagaaatctctacaaggctcttactgacaagggaatc 200  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||    
T  14666 ctatggattcacttaccaagtgttcatcagttttaggggcactgacactcggcacggttttaccggaaatctctacaaggctcttactgacaagggaatc 14567  T
Q  201 cataccttcattgatgacaatgatcttcaaagaggagat 239  Q
    |||||||||||||||||||||||||||||||||||||||    
T  14566 cataccttcattgatgacaatgatcttcaaagaggagat 14528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349; HSP #2
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 9 - 239
Target Start/End: Complemental strand, 3825 - 3595
Alignment:
Q  9 cattcatattctgcattctcaaactcttttttcatccaatttctctcaattcttatggctatacaatcaccttcctcatccacttcattttcctatggat 108  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||| | ||||||||||||||||||||||||||| ||||||||||||||||||    
T  3825 cattcatattctgcattctcaaactcttttttcatcctatttctctcaattgtcatggctatacaatcaccttcctcatcctcttcattttcctatggat 3726  T
Q  109 tcacttaccaagtgttcctcagttttaggggcactgacactcgccacggttttaccagaaatctctacaaggctcttactgacaagggaatccatacctt 208  Q
    ||||||||||||||||||| ||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  3725 tcacttaccaagtgttccttagttttaggggcactgacactcggcacggttttaccggaaatctctacaaggctcttactgacaagggaatccatacctt 3626  T
Q  209 cattgatgacaatgatcttcaaagaggagat 239  Q
    |||||||||||||||||||||||||||||||    
T  3625 cattgatgacaatgatcttcaaagaggagat 3595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349; HSP #3
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 8212 - 8062
Alignment:
Q  1 aatttactcattcatattctgcattctcaaactcttttttcatccaatttctctcaattcttatggctatacaatcaccttcctcatccacttcattttc 100  Q
    |||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||| ||||||| ||    
T  8212 aattcactcattcatattctgcattctcaaactcttttttcatcctatttctctcaattctcatggctatacaatcaccttcctcatcctcttcattctc 8113  T
Q  101 ctatggattcacttaccaagtgttcctcagttttaggggcactgacactcg 151  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||||    
T  8112 ccatggattcacttaccaagtgttcctcagttttaggggcactgacactcg 8062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0277 (Bit Score: 206; Significance: 1e-113; HSPs: 2)
Name: scaffold0277
Description:

Target: scaffold0277; HSP #1
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 10 - 239
Target Start/End: Complemental strand, 5073 - 4844
Alignment:
Q  10 attcatattctgcattctcaaactcttttttcatccaatttctctcaattcttatggctatacaatcaccttcctcatccacttcattttcctatggatt 109  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  5073 attcatattctgaattctcaaactcttttttcatccaatttctctcaattcttatggctatacaatcaccttcctcatcctcttcattttcctatggatt 4974  T
Q  110 cacttaccaagtgttcctcagttttaggggcactgacactcgccacggttttaccagaaatctctacaaggctcttactgacaagggaatccataccttc 209  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| | ||||||    
T  4973 cacttaccaagtgttcctcagttttaggggcattgacactcgccacggttttaccggaaatctctacaaggctcttactgacaagggaatcaaaaccttc 4874  T
Q  210 attgatgacaatgatcttcaaagaggagat 239  Q
    ||||||||||||||||||||||||||||||    
T  4873 attgatgacaatgatcttcaaagaggagat 4844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0277; HSP #2
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 6 - 239
Target Start/End: Complemental strand, 14038 - 13805
Alignment:
Q  6 actcattcatattctgcattctcaaactcttttttcatccaatttctctcaattcttatggctatacaatcaccttcctcatccacttcattttcctatg 105  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||| | |||||||| |||| ||||||||| ||| |||||||||||| ||    
T  14038 actcattcatattctgaattctcaaactcttttttcatccaatttctctcaattatcatggctatgcaattaccttcctcttcctcttcattttcctctg 13939  T
Q  106 gattcacttaccaagtgttcctcagttttaggggcactgacactcgccacggttttaccagaaatctctacaaggctcttactgacaagggaatccatac 205  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||| | ||    
T  13938 cattcacttaccaagtgttcctcagttttaggggcactgacactcgccacggttttaccggcaatctctacaaggctcttactgacaagggaatcaaaac 13839  T
Q  206 cttcattgatgacaatgatcttcaaagaggagat 239  Q
    ||||||||||||||||||||||||||||||||||    
T  13838 cttcattgatgacaatgatcttcaaagaggagat 13805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1254 (Bit Score: 165; Significance: 2e-88; HSPs: 1)
Name: scaffold1254
Description:

Target: scaffold1254; HSP #1
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 23 - 239
Target Start/End: Complemental strand, 306 - 90
Alignment:
Q  23 attctcaaactcttttttcatccaatttctctcaattcttatggctatacaatcaccttcctcatccacttcattttcctatggattcacttaccaagtg 122  Q
    |||||||||||||||||||||| |||||||||||||||| |||||||| ||||||||| |||| ||| |||||||||| |||| ||||||||||||||||    
T  306 attctcaaactcttttttcatctaatttctctcaattctcatggctatgcaatcacctccctcttcctcttcattttcatatgcattcacttaccaagtg 207  T
Q  123 ttcctcagttttaggggcactgacactcgccacggttttaccagaaatctctacaaggctcttactgacaagggaatccataccttcattgatgacaatg 222  Q
    ||||| |||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||| | |||||||||||||||||||    
T  206 ttccttagttttaggggcactgacactcgccacggttttaccggcaatctctacaaggctcttactgacaagggaatcaaaaccttcattgatgacaatg 107  T
Q  223 atcttcaaagaggagat 239  Q
    |||||||||||||||||    
T  106 atcttcaaagaggagat 90  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0419 (Bit Score: 165; Significance: 2e-88; HSPs: 1)
Name: scaffold0419
Description:

Target: scaffold0419; HSP #1
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 23 - 239
Target Start/End: Original strand, 7323 - 7539
Alignment:
Q  23 attctcaaactcttttttcatccaatttctctcaattcttatggctatacaatcaccttcctcatccacttcattttcctatggattcacttaccaagtg 122  Q
    |||||||||||||||||||||| |||||||||||||||| |||||||| ||||||||| |||| ||| |||||||||| |||| ||||||||||||||||    
T  7323 attctcaaactcttttttcatctaatttctctcaattctcatggctatgcaatcacctccctcttcctcttcattttcatatgcattcacttaccaagtg 7422  T
Q  123 ttcctcagttttaggggcactgacactcgccacggttttaccagaaatctctacaaggctcttactgacaagggaatccataccttcattgatgacaatg 222  Q
    ||||| |||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||| | |||||||||||||||||||    
T  7423 ttccttagttttaggggcactgacactcgccacggttttaccggcaatctctacaaggctcttactgacaagggaatcaaaaccttcattgatgacaatg 7522  T
Q  223 atcttcaaagaggagat 239  Q
    |||||||||||||||||    
T  7523 atcttcaaagaggagat 7539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 143; Significance: 3e-75; HSPs: 8)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 12 - 218
Target Start/End: Complemental strand, 18699787 - 18699581
Alignment:
Q  12 tcatattctgcattctcaaactcttttttcatccaatttctctcaattcttatggctatacaatcaccttcctcatccacttcattttcctatggattca 111  Q
    ||||||||||||||||||||||||||||||||| | |||||||||||||| |||||||| |||||||||||||||||| |||||||||||||| ||||||    
T  18699787 tcatattctgcattctcaaactcttttttcatctagtttctctcaattctcatggctatgcaatcaccttcctcatcctcttcattttcctatcgattca 18699688  T
Q  112 cttaccaagtgttcctcagttttaggggcactgacactcgccacggttttaccagaaatctctacaaggctcttactgacaagggaatccataccttcat 211  Q
    ||||||||||||||||||| || |||||||||||||||||  ||||||||||  |  |||||||||| ||||||||||||||||||||||| ||||||||    
T  18699687 cttaccaagtgttcctcagcttcaggggcactgacactcgtgacggttttactggccatctctacaaagctcttactgacaagggaatccacaccttcat 18699588  T
Q  212 tgatgac 218  Q
    |||||||    
T  18699587 tgatgac 18699581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 12 - 218
Target Start/End: Complemental strand, 18655864 - 18655658
Alignment:
Q  12 tcatattctgcattctcaaactcttttttcatccaatttctctcaattcttatggctatacaatcaccttcctcatccacttcattttcctatggattca 111  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||| | |||||||  |||||||||||||||||| |||||||||||||| ||||||    
T  18655864 tcatattctgcattctcaaactcttttttcatccagtttctctcaattttcatggctaggcaatcaccttcctcatcctcttcattttcctatcgattca 18655765  T
Q  112 cttaccaagtgttcctcagttttaggggcactgacactcgccacggttttaccagaaatctctacaaggctcttactgacaagggaatccataccttcat 211  Q
    ||||||||||||||||||| || ||||||| |||||||||  ||||||||||  |  |||||||||| ||||||||||||||||||||||| ||||||||    
T  18655764 cttaccaagtgttcctcagcttcaggggcagtgacactcgtaacggttttactgggcatctctacaaagctcttactgacaagggaatccacaccttcat 18655665  T
Q  212 tgatgac 218  Q
    |||||||    
T  18655664 tgatgac 18655658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 12 - 235
Target Start/End: Complemental strand, 18679954 - 18679731
Alignment:
Q  12 tcatattctgcattctcaaactcttttttcatccaatttctctcaattcttatggctatacaatcaccttcctcatccacttcattttcctatggattca 111  Q
    ||||||||||||||||||||||||||||||||||| |||||||| ||| | |||||||| |||||||||||||||| | |||||||||||||| ||||||    
T  18679954 tcatattctgcattctcaaactcttttttcatccagtttctctctattttcatggctatgcaatcaccttcctcattctcttcattttcctatcgattca 18679855  T
Q  112 cttaccaagtgttcctcagttttaggggcactgacactcgccacggttttaccagaaatctctacaaggctcttactgacaagggaatccataccttcat 211  Q
    ||||||||||||||||||| || ||||||| |||||||||  ||||||||||  |  ||||||||||||||||||||||||| |||||||| ||||||||    
T  18679854 cttaccaagtgttcctcagcttcaggggcagtgacactcgtaacggttttactggtcatctctacaaggctcttactgacaaaggaatccacaccttcat 18679755  T
Q  212 tgatgacaatgatcttcaaagagg 235  Q
    |||||||  ||| || ||||||||    
T  18679754 tgatgaccgtgacctgcaaagagg 18679731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 12 - 235
Target Start/End: Complemental strand, 18731891 - 18731668
Alignment:
Q  12 tcatattctgcattctcaaactcttttttcatccaatttctctcaattcttatggctatacaatcaccttcctcatccacttcattttcctatggattca 111  Q
    ||||||||||||||||||||||||||||||||||| |||||||| ||| | |||||||| |||||||||||||||||| |||||||||||||| ||||||    
T  18731891 tcatattctgcattctcaaactcttttttcatccagtttctctcgattttcatggctatgcaatcaccttcctcatcctcttcattttcctatcgattca 18731792  T
Q  112 cttaccaagtgttcctcagttttaggggcactgacactcgccacggttttaccagaaatctctacaaggctcttactgacaagggaatccataccttcat 211  Q
    ||||||||||||||||||| || ||||||| |||||||||  ||||||||||  |  |||||||||  ||||||||||||||||||||||| ||||||||    
T  18731791 cttaccaagtgttcctcagcttcaggggcagtgacactcgtgacggttttactggccatctctacagagctcttactgacaagggaatccacaccttcat 18731692  T
Q  212 tgatgacaatgatcttcaaagagg 235  Q
    |||||||  ||| || ||||||||    
T  18731691 tgatgaccgtgacctgcaaagagg 18731668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 52 - 235
Target Start/End: Complemental strand, 18724432 - 18724249
Alignment:
Q  52 tctcaattcttatggctatacaatcaccttcctcatccacttcattttcctatggattcacttaccaagtgttcctcagttttaggggcactgacactcg 151  Q
    |||||||||| |||||||| |||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||| || ||||||| |||||||||    
T  18724432 tctcaattctcatggctatgcaatcaccttcctcatcctcttcattttcctatcgattcacttaccaagtgttcctcagcttcaggggcagtgacactcg 18724333  T
Q  152 ccacggttttaccagaaatctctacaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttcaaagagg 235  Q
      ||||||||||  |  |||||||||||||||||||||||||||||||||| |||||||||||||||  ||| || ||||||||    
T  18724332 taacggttttactggtcatctctacaaggctcttactgacaagggaatccacaccttcattgatgaccgtgacctgcaaagagg 18724249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 7 - 223
Target Start/End: Complemental strand, 17989440 - 17989226
Alignment:
Q  7 ctcattcatattctgcattctcaaactcttttttcatccaatttctctcaattcttatggctatacaatcaccttcctcatccacttcattttcctatgg 106  Q
    |||||||||||||||||||||||||||||| |  ||||  ||||||||||||||| ||||| || |||| ||||| ||  ||| |||||||||||||||     
T  17989440 ctcattcatattctgcattctcaaactcttct--catcttatttctctcaattctcatggccatgcaattacctttctattcctcttcattttcctatgc 17989343  T
Q  107 attcacttaccaagtgttcctcagttttaggggcactgacactcgccacggttttaccagaaatctctacaaggctcttactgacaagggaatccatacc 206  Q
    ||||| |||| | |||||||||| || || |||||| ||||||||  ||||||| ||| | |||||||  |||||||||| |||||||||||| | ||||    
T  17989342 attcagttacgatgtgttcctcatttgtaagggcaccgacactcggtacggtttcaccggcaatctcttgaaggctcttattgacaagggaattcgtacc 17989243  T
Q  207 ttcattgatgacaatga 223  Q
    |||  ||||||| ||||    
T  17989242 ttccatgatgacgatga 17989226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 7 - 223
Target Start/End: Original strand, 18073549 - 18073763
Alignment:
Q  7 ctcattcatattctgcattctcaaactcttttttcatccaatttctctcaattcttatggctatacaatcaccttcctcatccacttcattttcctatgg 106  Q
    |||||||||||||||||||||||||||||| |  ||||  ||||||||||||||| ||||| || |||| ||||| ||  ||| |||||||||||||||     
T  18073549 ctcattcatattctgcattctcaaactcttct--catcttatttctctcaattctcatggccatgcaattacctttctattcctcttcattttcctatgc 18073646  T
Q  107 attcacttaccaagtgttcctcagttttaggggcactgacactcgccacggttttaccagaaatctctacaaggctcttactgacaagggaatccatacc 206  Q
    ||||| |||| | |||||||||| || || |||||| ||||||||  ||||||| ||| | |||||||  |||||||||| |||||||||||| | ||||    
T  18073647 attcagttacgatgtgttcctcatttgtaagggcaccgacactcggtacggtttcaccggcaatctcttgaaggctcttattgacaagggaattcgtacc 18073746  T
Q  207 ttcattgatgacaatga 223  Q
    |||  ||||||| ||||    
T  18073747 ttccatgatgacgatga 18073763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 219
Target Start/End: Complemental strand, 5091237 - 5091147
Alignment:
Q  129 agttttaggggcactgacactcgccacggttttaccagaaatctctacaaggctcttactgacaagggaatccataccttcattgatgaca 219  Q
    |||||||| ||||| ||||||||  ||||||||||  ||||||||||  | |||||   || ||||||||| || ||||||||||||||||    
T  5091237 agttttagaggcaccgacactcgttacggttttactggaaatctctatgaagctctacgtgtcaagggaattcacaccttcattgatgaca 5091147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 87; Significance: 8e-42; HSPs: 3)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 28 - 238
Target Start/End: Complemental strand, 28164733 - 28164523
Alignment:
Q  28 caaactcttttttcatccaatttctctcaattcttatggctatacaatcaccttcctcatccacttcattttcctatggattcacttaccaagtgttcct 127  Q
    ||||||||||| ||||||||||||| |||||||| |||||||||| ||| | |||||| ||| ||||| |||||||||||||||| ||||||||||||||    
T  28164733 caaactcttttctcatccaatttctgtcaattctcatggctatacgatcgcattcctcttcctcttcaatttcctatggattcacataccaagtgttcct 28164634  T
Q  128 cagttttaggggcactgacactcgccacggttttaccagaaatctctacaaggctcttactgacaagggaatccataccttcattgatgacaatgatctt 227  Q
    |||||||||||||| |||||||||  ||||||| ||  |  ||||||| ||||| |||   ||||||||||| || || |||||||||||   |||||||    
T  28164633 cagttttaggggcagtgacactcgtgacggtttcactggccatctctataaggcccttgacgacaagggaattcacacattcattgatgattgtgatctt 28164534  T
Q  228 caaagaggaga 238  Q
     | ||||||||    
T  28164533 gagagaggaga 28164523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 31 - 217
Target Start/End: Complemental strand, 28128042 - 28127862
Alignment:
Q  31 actcttttttcatccaatttctctcaattcttatggctatacaatcaccttcctcatccacttcattttcctatggattcacttaccaagtgttcctcag 130  Q
    |||||||| ||||||||||| | |||||||| |||||||| ||||||| ||||||      |||| |||||||||||||||| |||||||||||||||||    
T  28128042 actcttttctcatccaatttttgtcaattctcatggctatgcaatcacattcctc------ttcaatttcctatggattcacataccaagtgttcctcag 28127949  T
Q  131 ttttaggggcactgacactcgccacggttttaccagaaatctctacaaggctcttactgacaagggaatccataccttcattgatga 217  Q
     || ||||||| |||||||||  ||||||| ||  |  ||||||||||||| |||  ||||||||||||||| || |||||||||||    
T  28127948 cttcaggggcagtgacactcgtgacggtttcactggccatctctacaaggccctttatgacaagggaatccacacattcattgatga 28127862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 52 - 235
Target Start/End: Complemental strand, 268704 - 268521
Alignment:
Q  52 tctcaattcttatggctatacaatcaccttcctcatccacttcattttcctatggattcacttaccaagtgttcctcagttttaggggcactgacactcg 151  Q
    ||||| |||| |||||||| |||||||||||||| ||| ||||| | || ||||||||  | ||||| || |||||||  || || |||  |||||||||    
T  268704 tctcagttctcatggctatgcaatcaccttcctcttcctcttcaatctcatatggatttgcctaccaggtcttcctcaacttcagaggcggtgacactcg 268605  T
Q  152 ccacggttttaccagaaatctctacaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttcaaagagg 235  Q
      | |||||||   |  |||||||||||||||||||||||||||||||||| ||||||||||||||   ||| |||||||||||    
T  268604 tgagggttttattggccatctctacaaggctcttactgacaagggaatccacaccttcattgatgatcgtgaacttcaaagagg 268521  T

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Target: scaffold0003 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 7 - 223
Target Start/End: Original strand, 59357 - 59571
Alignment:
Q  7 ctcattcatattctgcattctcaaactcttttttcatccaatttctctcaattcttatggctatacaatcaccttcctcatccacttcattttcctatgg 106  Q
    |||||||||||||||||||||||||||||| |  ||||  ||||||||||||||| ||||| || |||| ||||| ||  ||| |||||||||||||||     
T  59357 ctcattcatattctgcattctcaaactcttct--catcttatttctctcaattctcatggccatgcaattacctttctattcctcttcattttcctatgc 59454  T
Q  107 attcacttaccaagtgttcctcagttttaggggcactgacactcgccacggttttaccagaaatctctacaaggctcttactgacaagggaatccatacc 206  Q
    ||||| |||| | |||||||||| || || |||||| ||||||||  ||||||| ||| | |||||||  |||||||||| |||||||||||| | ||||    
T  59455 attcagttacgatgtgttcctcatttgtaagggcaccgacactcggtacggtttcaccggcaatctcttgaaggctcttattgacaagggaattcgtacc 59554  T
Q  207 ttcattgatgacaatga 223  Q
    |||  ||||||| ||||    
T  59555 ttccatgatgacgatga 59571  T

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Target: chr8 (Bit Score: 69; Significance: 5e-31; HSPs: 2)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 63 - 235
Target Start/End: Complemental strand, 29274119 - 29273947
Alignment:
Q  63 atggctatacaatcaccttcctcatccacttcattttcctatggattcacttaccaagtgttcctcagttttaggggcactgacactcgccacggtttta 162  Q
    |||||||| |||||||||||||| ||| ||||| | || ||||||||||||||||| || |||||||  ||||| |||  |||||||||  |||||||||    
T  29274119 atggctatgcaatcaccttcctcttcctcttcaatctcatatggattcacttaccaggtcttcctcaactttagaggcggtgacactcgtgacggtttta 29274020  T
Q  163 ccagaaatctctacaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttcaaagagg 235  Q
       |  ||||||||||| |||||||||||||||||||||| ||||||||||||||   ||| |||||||||||    
T  29274019 ttggccatctctacaagactcttactgacaagggaatccacaccttcattgatgatcgtgaacttcaaagagg 29273947  T

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Target: chr8; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 102 - 236
Target Start/End: Original strand, 31903728 - 31903862
Alignment:
Q  102 tatggattcacttaccaagtgttcctcagttttaggggcactgacactcgccacggttttaccagaaatctctacaaggctcttactgacaagggaatcc 201  Q
    ||||||||||| ||| | ||||||||||| ||||| |||   ||||||||| | ||||||||  ||||||||||||| ||||||  ||| ||||||||||    
T  31903728 tatggattcacctacgatgtgttcctcagctttagaggcttagacactcgctatggttttactggaaatctctacaaagctctttatgataagggaatcc 31903827  T
Q  202 ataccttcattgatgacaatgatcttcaaagagga 236  Q
    | ||||| ||||| ||  | || ||||||||||||    
T  31903828 acacctttattgacgatgaagaacttcaaagagga 31903862  T

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Target: scaffold0038 (Bit Score: 49; Significance: 4e-19; HSPs: 2)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 99 - 239
Target Start/End: Original strand, 34599 - 34739
Alignment:
Q  99 tcctatggattcacttaccaagtgttcctcagttttaggggcactgacactcgccacggttttaccagaaatctctacaaggctcttactgacaagggaa 198  Q
    |||||||||||||| ||  | |||||||| |||||||| || | |||||||||| | |||||||||  ||||||||| |  ||||||  | |||||||||    
T  34599 tcctatggattcacctatgacgtgttccttagttttagaggtagtgacactcgctatggttttaccgaaaatctctatagagctctttgtcacaagggaa 34698  T
Q  199 tccataccttcattgatgacaatgatcttcaaagaggagat 239  Q
    |||| ||||||||||||||||  || |||||| ||||||||    
T  34699 tccacaccttcattgatgacagggagcttcaaggaggagat 34739  T

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Target: scaffold0038; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 91 - 235
Target Start/End: Original strand, 116662 - 116806
Alignment:
Q  91 cttcattttcctatggattcacttaccaagtgttcctcagttttaggggcactgacactcgccacggttttaccagaaatctctacaaggctcttactga 190  Q
    |||| ||||||||||||||||| ||  | |||||||| |||||||| || | |||||||||  | ||||||||  ||||||||||||| | ||||  |      
T  116662 cttccttttcctatggattcacctatgacgtgttccttagttttagaggtagtgacactcgttatggttttactggaaatctctacaaagatctttgtag 116761  T
Q  191 caagggaatccataccttcattgatgacaatgatcttcaaagagg 235  Q
     ||| |||| | |||||||||||||||||| || |||||| ||||    
T  116762 gaagagaattcgtaccttcattgatgacaaagaccttcaacgagg 116806  T

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Target: scaffold0019 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 99 - 219
Target Start/End: Complemental strand, 58595 - 58475
Alignment:
Q  99 tcctatggattcacttaccaagtgttcctcagttttaggggcactgacactcgccacggttttaccagaaatctctacaaggctcttactgacaagggaa 198  Q
    |||||||||||||| || || |||||||| || ||||| ||   |||||||||| | ||||||||  ||||||||||||  ||||||  |||||||||||    
T  58595 tcctatggattcacctatcacgtgttccttagctttagaggttgtgacactcgctatggttttactggaaatctctacagagctctttgtgacaagggaa 58496  T
Q  199 tccataccttcattgatgaca 219  Q
    |||  |||||||| |||||||    
T  58495 tccgaaccttcatggatgaca 58475  T

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Target: scaffold0713 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0713
Description:

Target: scaffold0713; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 62 - 129
Target Start/End: Original strand, 5915 - 5982
Alignment:
Q  62 tatggctatacaatcaccttcctcatccacttcattttcctatggattcacttaccaagtgttcctca 129  Q
    ||||| ||| ||||||||||||||  || | || |||||||||||| |||| ||||||||||||||||    
T  5915 tatggttattcaatcaccttcctctacctcatccttttcctatggactcacataccaagtgttcctca 5982  T

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Target: chr2 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 175
Target Start/End: Original strand, 3279592 - 3279638
Alignment:
Q  129 agttttaggggcactgacactcgccacggttttaccagaaatctcta 175  Q
    |||||||||||||||||||||||| | ||||||||  ||||||||||    
T  3279592 agttttaggggcactgacactcgctatggttttactggaaatctcta 3279638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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