View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20463_high_39 (Length: 253)
Name: NF20463_high_39
Description: NF20463
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20463_high_39 |
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Alignment Details
Target: chr4 (Bit Score: 218; Significance: 1e-120; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 10 - 239
Target Start/End: Original strand, 21175005 - 21175234
Alignment:
| Q |
10 |
ataatactaataattttatgataaatggtaacattggaagttttgttggtgaaagtgttaaccaacatgaagaaaaatcaagtggagttggatatagtta |
109 |
Q |
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| T |
21175005 |
ataataataataattttatgataaatggtaacattggaagttttgttggtgaaagtgttaaccaacatgaagaaaaatcaagtggagttggatatagtta |
21175104 |
T |
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| Q |
110 |
ttataatggtcaaagtcaaacattaaatccattactagattatggtcttgaagatattaagcaattgattagtagcagcagtaacaaaggttttcatgtt |
209 |
Q |
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| T |
21175105 |
taataatggtcaaagtcaaacattaaatccattactagattatggtcttgaagatattaagcaattgattagtagcagcggtaacaaaggttttcatgtt |
21175204 |
T |
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| Q |
210 |
gatgatattcataagaatgaagagattggt |
239 |
Q |
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|||||||||||||||||||||||||||||| |
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| T |
21175205 |
gatgatattcataagaatgaagagattggt |
21175234 |
T |
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