View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20463_high_51 (Length: 209)
Name: NF20463_high_51
Description: NF20463
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20463_high_51 |
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Alignment Details
Target: chr3 (Bit Score: 169; Significance: 8e-91; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 169; E-Value: 8e-91
Query Start/End: Original strand, 15 - 191
Target Start/End: Original strand, 51804541 - 51804717
Alignment:
| Q |
15 |
cacagatacaccggccacccatatagtgttcatcttcttactcttgtaaccatccgaacataatggaaagtttctttgatcagatgaattagcattaacc |
114 |
Q |
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| T |
51804541 |
cacagatacaccggccacccatatagtgttcatcttcttactcttgtaaccatgtgaacataatggaaagtttctttgatcagatgaattagcattaacc |
51804640 |
T |
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| Q |
115 |
ggcatcatcacacataaaccaggattccctgcaaagctttcaactaaccctcctttaatcaatttaggaggaatagg |
191 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
51804641 |
ggcatcatcacacataaaccaggattccctgcaaagctttcaactaaccctcctttaatcaatttaggaggaatagg |
51804717 |
T |
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