View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20463_low_10 (Length: 450)
Name: NF20463_low_10
Description: NF20463
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20463_low_10 |
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Alignment Details
Target: chr5 (Bit Score: 405; Significance: 0; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 405; E-Value: 0
Query Start/End: Original strand, 25 - 445
Target Start/End: Original strand, 2274255 - 2274675
Alignment:
| Q |
25 |
gatataatacaaaacatatgaaagtgatcggaataagatgtgattgccctagtgtattaagacatttaaagttgagattagcttaattgcttaaaaaatt |
124 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2274255 |
gatataatacaaaacatatgaaagtgatcggaataagatgtgattgccctagtgtattaagacatttaaagttgagattagcttaattgcttaaaaaatt |
2274354 |
T |
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| Q |
125 |
acattataaaccattcctaatgccttgcggcgggggcagcaaagaaaatttgaaggagtacatgccttgtaaggtaaggaaacaaatgacatgttttcat |
224 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2274355 |
acattataaaccattcctaatgccttgcggcgggggcagcaaagaaaatttgaaggagtacatgccttgtaaggtaaggaaacaaatgacatgttttcat |
2274454 |
T |
|
| Q |
225 |
tgctcaattatttattgactttacatgtattaattccgcctaaccttccatgaattccgtcatacacttacttttcattggttagttgttattcgtgata |
324 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
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| T |
2274455 |
tgctcaattatttattgactttacatgtattaattccgcctaaccttccatgaattccgtcaaacacttacttttcattggttagttgttattcgtgata |
2274554 |
T |
|
| Q |
325 |
cttctttcgcaagatatagcaatattgttccctttataataacacttgaatcattaaatagattattcatctcattagtggttacaattagtctttatct |
424 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||| |
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| T |
2274555 |
cttctttcgcaagatatagcaatattgttccctttataataacacttgaataattaaatagattattcatctcattagtggttacaattagtccttatct |
2274654 |
T |
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| Q |
425 |
gactttcaaattcatctcact |
445 |
Q |
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||||||||||||||| ||||| |
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| T |
2274655 |
gactttcaaattcatttcact |
2274675 |
T |
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