View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20464_high_25 (Length: 354)

Name: NF20464_high_25
Description: NF20464
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20464_high_25
NF20464_high_25
[»] chr7 (1 HSPs)
chr7 (12-298)||(23188287-23188574)


Alignment Details
Target: chr7 (Bit Score: 262; Significance: 1e-146; HSPs: 1)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 262; E-Value: 1e-146
Query Start/End: Original strand, 12 - 298
Target Start/End: Original strand, 23188287 - 23188574
Alignment:
Q  12 tgaaccaaataaaattcaaaaagaaaaccaaatttagtttcgtagctgatacaaattgcaaaaggtcatagcatcaaatat--atattaacaaaattcat 109  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||  |||||||||||||||||    
T  23188287 tgaaccaaataaaattcaaaaagaaaaccaaatttagtttcgtagctgatgcaaattgcaaaaggtcatagcatcaaatatatatattaacaaaattcat 23188386  T
Q  110 tttgaaaaattgtcaaactcttgtttctgcgttgtgcttttctcggttctatgaggtgcttcgtgcacaaacaatgtatagcagattgtgtcatcttcta 209  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23188387 tttgaaaaattgtcaaactcttgtttctgcgttgtgcttttctcggttctatgaggtgcttcgtgcacaaacaatgtatagcagattgtgtcatcttcta 23188486  T
Q  210 gcatggtttgttcttgcgttgtgtatttaatagttagattttatttaaaatataataaaatttgaaaccctattcgaatagaatattta 298  Q
    |||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23188487 gcatgg-ttgttcttgcattgtgtatttaatagttagattttatttaaaatataataaaatttgaaaccctattcgaatagaatattta 23188574  T

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