View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20464_high_35 (Length: 298)
Name: NF20464_high_35
Description: NF20464
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20464_high_35 |
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Alignment Details
Target: chr6 (Bit Score: 248; Significance: 1e-138; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 248; E-Value: 1e-138
Query Start/End: Original strand, 12 - 284
Target Start/End: Original strand, 34199941 - 34200213
Alignment:
| Q |
12 |
ataggttttaagaaaaatcaaaatcagcattgaaatcttgacctttaaattttttatcagacggttcaaatgtgtctgactcaacgtagtcatgctgcac |
111 |
Q |
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| T |
34199941 |
ataggttttaagaaaaatcaaaatcagcattgaaatcttgacctttaaattttttatcagacggttcaaatgtgtctgactcaacgtagtcatgctgcac |
34200040 |
T |
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| Q |
112 |
acaacccaaatccaatttgcgcaggtgannnnnnngaaaacgaagtggataagattgtaatattggatgtgtaatctaaaccattacactggcacacaag |
211 |
Q |
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|||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34200041 |
acaacccaaatccaatttgcgcaggtgatttttttgaaagcgaagtggataagattgtaatattggatgtgtaatctaaaccattacactggcacacaag |
34200140 |
T |
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| Q |
212 |
tttcactgctcatgatcaaaaccaatcaaaaggccttgtcaatttcatggaatgaagttgttgaaggtataat |
284 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34200141 |
tttcactgctcatgatcaaaaccaatcaaaaggccttgtcaatttcatggaatgaagttgttgaaggtataat |
34200213 |
T |
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