View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20464_low_6 (Length: 599)

Name: NF20464_low_6
Description: NF20464
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20464_low_6
NF20464_low_6
[»] chr6 (26 HSPs)
chr6 (8-343)||(7393772-7394118)
chr6 (374-582)||(7393342-7393550)
chr6 (21-221)||(24602874-24603074)
chr6 (8-172)||(14032413-14032577)
chr6 (8-260)||(14505943-14506201)
chr6 (21-224)||(12678109-12678311)
chr6 (8-130)||(30816114-30816236)
chr6 (21-111)||(14410961-14411051)
chr6 (21-224)||(32853713-32853917)
chr6 (21-187)||(10188125-10188292)
chr6 (8-224)||(5863398-5863615)
chr6 (21-224)||(10142533-10142737)
chr6 (48-224)||(11762342-11762518)
chr6 (14-116)||(14245110-14245212)
chr6 (21-224)||(2367195-2367399)
chr6 (21-187)||(12141254-12141421)
chr6 (23-224)||(24225569-24225771)
chr6 (14-130)||(14254821-14254937)
chr6 (46-224)||(27738666-27738845)
chr6 (20-233)||(27534552-27534766)
chr6 (8-85)||(32532420-32532497)
chr6 (22-83)||(32052927-32052988)
chr6 (21-85)||(3484078-3484142)
chr6 (64-130)||(32053000-32053067)
chr6 (157-224)||(32532546-32532613)
chr6 (14-79)||(12309441-12309506)
[»] chr3 (40 HSPs)
chr3 (8-220)||(53631761-53631973)
chr3 (8-224)||(4557320-4557536)
chr3 (8-224)||(4016059-4016275)
chr3 (8-200)||(31126834-31127026)
chr3 (25-224)||(42758248-42758447)
chr3 (21-167)||(41937074-41937220)
chr3 (14-163)||(30682684-30682833)
chr3 (8-234)||(34119515-34119739)
chr3 (21-233)||(22535847-22536060)
chr3 (25-234)||(54317018-54317227)
chr3 (8-224)||(48390832-48391048)
chr3 (8-233)||(43582434-43582659)
chr3 (8-145)||(19111592-19111728)
chr3 (24-224)||(34025826-34026027)
chr3 (22-233)||(23580698-23580909)
chr3 (8-215)||(44106816-44107024)
chr3 (21-224)||(830879-831081)
chr3 (21-224)||(44953450-44953654)
chr3 (22-199)||(20086879-20087056)
chr3 (8-217)||(44639131-44639340)
chr3 (23-187)||(17146202-17146367)
chr3 (21-224)||(44172495-44172699)
chr3 (21-224)||(44179195-44179399)
chr3 (21-224)||(49579933-49580137)
chr3 (8-224)||(29842164-29842381)
chr3 (8-111)||(34154274-34154378)
chr3 (20-130)||(10823802-10823913)
chr3 (21-111)||(52198023-52198114)
chr3 (21-130)||(6738503-6738613)
chr3 (21-130)||(44252616-44252726)
chr3 (21-222)||(52572478-52572680)
chr3 (21-116)||(48306659-48306755)
chr3 (21-130)||(39655382-39655492)
chr3 (21-172)||(39728540-39728692)
chr3 (21-224)||(49025550-49025753)
chr3 (21-111)||(7469906-7469997)
chr3 (21-224)||(29284205-29284409)
chr3 (21-111)||(23547100-23547191)
chr3 (25-91)||(55438828-55438894)
chr3 (14-128)||(14208264-14208377)
[»] chr7 (50 HSPs)
chr7 (8-224)||(12980238-12980455)
chr7 (8-224)||(18825887-18826103)
chr7 (6-224)||(5376945-5377163)
chr7 (25-224)||(3920417-3920616)
chr7 (25-224)||(27850341-27850540)
chr7 (21-215)||(25782931-25783125)
chr7 (21-171)||(46127251-46127398)
chr7 (8-223)||(16078875-16079090)
chr7 (8-130)||(2630683-2630805)
chr7 (29-275)||(26622834-26623086)
chr7 (21-224)||(7779882-7780086)
chr7 (22-224)||(25979932-25980135)
chr7 (21-220)||(38139811-38140012)
chr7 (21-145)||(24425256-24425379)
chr7 (8-223)||(37182136-37182351)
chr7 (21-145)||(37579137-37579261)
chr7 (21-217)||(30650505-30650702)
chr7 (21-224)||(45379980-45380185)
chr7 (8-111)||(44986026-44986130)
chr7 (21-163)||(23328484-23328627)
chr7 (36-146)||(26004565-26004675)
chr7 (14-111)||(5916194-5916291)
chr7 (8-224)||(17885326-17885543)
chr7 (21-224)||(16866043-16866247)
chr7 (21-213)||(17851728-17851921)
chr7 (8-224)||(41741465-41741681)
chr7 (21-233)||(45885771-45885984)
chr7 (52-260)||(16811635-16811849)
chr7 (22-224)||(41103528-41103734)
chr7 (21-134)||(39316869-39316983)
chr7 (29-172)||(25905510-25905655)
chr7 (8-85)||(26004675-26004752)
chr7 (21-224)||(35074343-35074548)
chr7 (21-224)||(18125243-18125447)
chr7 (21-224)||(39456030-39456232)
chr7 (21-216)||(44794051-44794246)
chr7 (24-222)||(44734374-44734573)
chr7 (21-130)||(37196107-37196217)
chr7 (50-187)||(44658501-44658639)
chr7 (21-130)||(45708971-45709081)
chr7 (8-85)||(3227698-3227775)
chr7 (21-224)||(21702533-21702737)
chr7 (8-111)||(43507294-43507398)
chr7 (94-224)||(3226961-3227091)
chr7 (21-134)||(24753050-24753163)
chr7 (21-79)||(38152776-38152834)
chr7 (21-83)||(10072363-10072425)
chr7 (225-311)||(24753260-24753346)
chr7 (225-274)||(44985865-44985914)
chr7 (92-224)||(38152833-38152965)
[»] chr1 (39 HSPs)
chr1 (8-224)||(45866200-45866417)
chr1 (21-274)||(16433126-16433379)
chr1 (21-220)||(9982909-9983108)
chr1 (25-187)||(29871337-29871499)
chr1 (21-147)||(35936909-35937035)
chr1 (25-220)||(34673301-34673496)
chr1 (14-224)||(17134810-17135021)
chr1 (8-186)||(40087516-40087695)
chr1 (8-187)||(49741059-49741238)
chr1 (8-111)||(44615604-44615707)
chr1 (8-111)||(44792862-44792965)
chr1 (21-115)||(44632260-44632354)
chr1 (8-224)||(18354095-18354312)
chr1 (8-224)||(12494868-12495084)
chr1 (21-224)||(19572527-19572730)
chr1 (22-224)||(24236776-24236979)
chr1 (21-187)||(42439722-42439889)
chr1 (8-134)||(42707935-42708062)
chr1 (8-138)||(50426756-50426887)
chr1 (21-224)||(36187235-36187439)
chr1 (8-134)||(5180902-5181029)
chr1 (8-130)||(17092068-17092191)
chr1 (21-224)||(51421728-51421932)
chr1 (8-130)||(3628096-3628219)
chr1 (21-233)||(49250779-49250992)
chr1 (21-224)||(29936286-29936490)
chr1 (8-111)||(34060147-34060251)
chr1 (28-121)||(16408823-16408917)
chr1 (21-233)||(28297803-28298017)
chr1 (29-164)||(24710736-24710872)
chr1 (8-130)||(23966729-23966852)
chr1 (8-134)||(39616160-39616287)
chr1 (21-130)||(34610943-34611053)
chr1 (22-110)||(13020559-13020648)
chr1 (60-146)||(2514677-2514764)
chr1 (21-130)||(20774502-20774612)
chr1 (15-89)||(8679684-8679758)
chr1 (225-283)||(40087402-40087460)
chr1 (94-187)||(13390357-13390450)
[»] chr4 (41 HSPs)
chr4 (8-224)||(1724326-1724542)
chr4 (8-224)||(26564694-26564910)
chr4 (21-224)||(12825477-12825680)
chr4 (21-187)||(19534331-19534497)
chr4 (21-199)||(37348999-37349177)
chr4 (8-172)||(13770523-13770687)
chr4 (14-111)||(6482165-6482262)
chr4 (14-172)||(7985189-7985348)
chr4 (25-220)||(37107291-37107486)
chr4 (14-140)||(425692-425818)
chr4 (9-158)||(39188379-39188527)
chr4 (8-111)||(29755459-29755562)
chr4 (21-224)||(32596200-32596403)
chr4 (21-233)||(47550360-47550573)
chr4 (8-116)||(9230146-9230257)
chr4 (21-224)||(31752331-31752535)
chr4 (8-214)||(21423723-21423930)
chr4 (8-130)||(42774623-42774746)
chr4 (8-224)||(48459343-48459560)
chr4 (21-223)||(32585363-32585567)
chr4 (21-224)||(43893103-43893307)
chr4 (26-116)||(39375160-39375250)
chr4 (21-224)||(5902630-5902834)
chr4 (21-223)||(6382289-6382493)
chr4 (21-134)||(47239491-47239605)
chr4 (26-108)||(15987372-15987455)
chr4 (25-111)||(28695271-28695357)
chr4 (21-130)||(31918669-31918779)
chr4 (21-224)||(11027947-11028152)
chr4 (21-224)||(7608845-7609049)
chr4 (8-111)||(39046815-39046919)
chr4 (21-223)||(11122886-11123089)
chr4 (8-130)||(42299653-42299776)
chr4 (8-130)||(44317396-44317519)
chr4 (8-130)||(4766422-4766546)
chr4 (20-85)||(53906437-53906502)
chr4 (51-164)||(13015327-13015446)
chr4 (51-130)||(55826734-55826814)
chr4 (225-304)||(6481953-6482032)
chr4 (8-63)||(13015550-13015605)
chr4 (152-224)||(1866565-1866637)
[»] chr8 (27 HSPs)
chr8 (8-224)||(1012474-1012691)
chr8 (21-223)||(20399461-20399664)
chr8 (16-224)||(43113641-43113849)
chr8 (8-260)||(17469112-17469370)
chr8 (8-187)||(24568796-24568974)
chr8 (8-221)||(45235921-45236135)
chr8 (25-234)||(36131922-36132130)
chr8 (8-187)||(34139304-34139483)
chr8 (14-111)||(35215367-35215464)
chr8 (21-224)||(27932282-27932486)
chr8 (21-233)||(24870030-24870242)
chr8 (20-224)||(1063375-1063580)
chr8 (8-128)||(29089567-29089685)
chr8 (21-224)||(29108837-29109041)
chr8 (21-130)||(2075943-2076053)
chr8 (21-130)||(4230828-4230938)
chr8 (32-222)||(14186205-14186391)
chr8 (21-130)||(17220586-17220696)
chr8 (31-172)||(34776945-34777087)
chr8 (21-133)||(32302929-32303042)
chr8 (8-85)||(40248502-40248579)
chr8 (21-155)||(34021348-34021480)
chr8 (22-214)||(24927819-24928012)
chr8 (20-130)||(28977223-28977334)
chr8 (8-116)||(39445691-39445799)
chr8 (8-67)||(11255177-11255236)
chr8 (21-85)||(31325134-31325197)
[»] chr2 (26 HSPs)
chr2 (21-260)||(6027862-6028108)
chr2 (8-145)||(31942280-31942417)
chr2 (21-187)||(19104893-19105059)
chr2 (21-233)||(13705367-13705580)
chr2 (22-224)||(7314663-7314866)
chr2 (8-130)||(12193936-12194059)
chr2 (21-224)||(14540656-14540855)
chr2 (20-233)||(45256692-45256906)
chr2 (8-215)||(10208454-10208662)
chr2 (8-116)||(16226850-16226958)
chr2 (21-224)||(37999353-37999557)
chr2 (21-222)||(45115428-45115630)
chr2 (8-130)||(37106556-37106678)
chr2 (21-222)||(8915954-8916156)
chr2 (21-188)||(10920515-10920683)
chr2 (8-111)||(37472857-37472961)
chr2 (21-224)||(9632256-9632460)
chr2 (20-134)||(18106195-18106310)
chr2 (21-130)||(42798098-42798208)
chr2 (21-172)||(13830606-13830758)
chr2 (21-224)||(24414147-24414351)
chr2 (20-130)||(36128216-36128327)
chr2 (21-130)||(30846815-30846925)
chr2 (8-224)||(44746124-44746341)
chr2 (14-71)||(37319805-37319862)
chr2 (225-304)||(8915855-8915934)
[»] chr5 (38 HSPs)
chr5 (21-170)||(3573094-3573243)
chr5 (14-215)||(35194014-35194215)
chr5 (8-172)||(30115340-30115504)
chr5 (8-130)||(12447238-12447360)
chr5 (23-172)||(27088420-27088568)
chr5 (8-223)||(35311679-35311894)
chr5 (21-140)||(2985017-2985136)
chr5 (21-224)||(42987495-42987699)
chr5 (8-163)||(2412803-2412958)
chr5 (8-224)||(4582975-4583192)
chr5 (25-259)||(38006444-38006684)
chr5 (21-224)||(4920695-4920899)
chr5 (8-146)||(33862278-33862415)
chr5 (8-224)||(17853309-17853524)
chr5 (22-173)||(18206888-18207041)
chr5 (21-111)||(1218626-1218716)
chr5 (8-218)||(28045511-28045722)
chr5 (8-111)||(3564856-3564960)
chr5 (8-223)||(29245968-29246184)
chr5 (21-172)||(40517675-40517827)
chr5 (23-103)||(42717769-42717849)
chr5 (21-172)||(22694969-22695121)
chr5 (25-224)||(8453389-8453587)
chr5 (21-223)||(30996466-30996668)
chr5 (21-130)||(5908798-5908908)
chr5 (14-223)||(15890069-15890278)
chr5 (31-187)||(6092571-6092728)
chr5 (8-111)||(13402131-13402235)
chr5 (21-111)||(6156047-6156138)
chr5 (22-111)||(6369566-6369656)
chr5 (21-130)||(20973595-20973705)
chr5 (21-187)||(12834627-12834795)
chr5 (8-74)||(27302899-27302965)
chr5 (21-85)||(10126977-10127041)
chr5 (225-268)||(2412680-2412723)
chr5 (21-223)||(12866568-12866772)
chr5 (94-172)||(15564579-15564657)
chr5 (76-133)||(33420437-33420494)
[»] scaffold0036 (1 HSPs)
scaffold0036 (8-224)||(33250-33466)
[»] scaffold0022 (1 HSPs)
scaffold0022 (14-224)||(90460-90670)
[»] scaffold0007 (1 HSPs)
scaffold0007 (21-163)||(197403-197545)
[»] scaffold0294 (1 HSPs)
scaffold0294 (21-223)||(14645-14847)
[»] scaffold0027 (2 HSPs)
scaffold0027 (14-145)||(6269-6400)
scaffold0027 (225-266)||(7788-7829)
[»] scaffold0014 (1 HSPs)
scaffold0014 (8-89)||(14295-14376)
[»] scaffold0135 (1 HSPs)
scaffold0135 (8-116)||(36012-36123)
[»] scaffold0189 (1 HSPs)
scaffold0189 (8-130)||(4113-4236)
[»] scaffold0097 (1 HSPs)
scaffold0097 (8-103)||(33440-33535)
[»] scaffold0519 (1 HSPs)
scaffold0519 (8-67)||(10157-10216)
[»] scaffold1630 (1 HSPs)
scaffold1630 (21-74)||(1492-1545)
[»] scaffold0902 (1 HSPs)
scaffold0902 (14-89)||(748-823)
[»] scaffold0095 (1 HSPs)
scaffold0095 (8-85)||(32685-32761)


Alignment Details
Target: chr6 (Bit Score: 236; Significance: 1e-130; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 8 - 343
Target Start/End: Complemental strand, 7394118 - 7393772
Alignment:
Q  8 tccaagaatatattcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagtttttataacacggtaattatcaaacaaa 107  Q
    ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7394118 tccaacaatatgttcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagtttttataacacggtaattatcaaacaaa 7394019  T
Q  108 ataatatgatataccaacataaaataaatttctgcattcaggatgagtttgagtatgagttcgggttagatacctatatatacattacccgtctcttact 207  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||| | ||||||||||||  ||||| ||||||||||||    
T  7394018 ataatatgatataccaacataaaataaatttatgcattcaggatgagtttgagtatgggttcggggtggatacctatatacccattatccgtctcttact 7393919  T
Q  208 cgtgttttgaaatcggg------ccaaactcaatcaaaatggagaaaatccgtcaaattaaatttgattcggacgtataaccaaatgtataggt-----t 296  Q
    |||||||||||||||||      |||||| |||||||||||| ||||||||||||||||  ||||||||||||||| ||||||||||||| |||     |    
T  7393918 cgtgttttgaaatcggggaaaatccaaacccaatcaaaatggggaaaatccgtcaaattggatttgattcggacgtgtaaccaaatgtatgggttttaat 7393819  T
Q  297 ttgctgccgtgcctatatgcaatcctttatggtttacccttttctta 343  Q
    |||||||||||||||| | ||||||||||||||||||||||||||||    
T  7393818 ttgctgccgtgcctatcttcaatcctttatggtttacccttttctta 7393772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 374 - 582
Target Start/End: Complemental strand, 7393550 - 7393342
Alignment:
Q  374 aaattgattatttacgttacattatgtttgtacttttaggacagatctggtatagaaatatgatataataaggaccaatcgaaagtgtatttccacaaaa 473  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||    
T  7393550 aaattgattctttacgttacattatgtttgtacttttaggacagatctggtatagaaatatgatataataaggaacaatcgaaagtgcatttccacaaaa 7393451  T
Q  474 aagatatataaaatgggcaatctaaggtggcaaaaaggtctataattaatcactgcaccgcagtctcagctccaaaattaaatttatcgacagtactata 573  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7393450 aagatatataaaatgggcaatctaaggtggcaaaaaggtctataattaatcactgcaccgcagtctcagctccaaaattaaatttatcgacagtactata 7393351  T
Q  574 ttatcaact 582  Q
    |||||||||    
T  7393350 ttatcaact 7393342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 21 - 221
Target Start/End: Complemental strand, 24603074 - 24602874
Alignment:
Q  21 tcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagtttttataacacggtaattatcaaacaaaataatatgatata 120  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||  |||||||||||||||||| |||  | |    
T  24603074 tcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatggtagtttttataacacgtcaattatcaaacaaaataacatggcaca 24602975  T
Q  121 ccaacataaaataaatttctgcattcaggatgagtttgagtatgagttcgggttagatacctatatatacattacccgtctcttactcgtgttttgaaat 220  Q
     ||||||||| ||| ||||| |||||  |||| ||||| ||||| ||||||| | | || |||||||    ||||||||| | ||| | |||||||||||    
T  24602974 tcaacataaagtaattttctacattcgtgatgggtttgggtatgggttcggggtgggtatctatatacctgttacccgtcacatacccatgttttgaaat 24602875  T
Q  221 c 221  Q
    |    
T  24602874 c 24602874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 8 - 172
Target Start/End: Original strand, 14032413 - 14032577
Alignment:
Q  8 tccaagaatatattcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagtttttataacacggtaattatcaaacaaa 107  Q
    ||||| |||||  |||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||   ||||||||||||||    
T  14032413 tccaacaatatgctcactttaacatttgttagaccgattgatttagttgctcctttaaatatcaatgatagtttttataacacaacaattatcaaacaaa 14032512  T
Q  108 ataatatgatataccaacataaaataaatttctgcattcaggatgagtttgagtatgagttcggg 172  Q
    |||| |||| ||| ||||||||| ||| ||| ||||||  ||| | ||||| ||||| |||||||    
T  14032513 ataacatgacatatcaacataaagtaattttatgcatttgggacgggtttgggtatgggttcggg 14032577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 8 - 260
Target Start/End: Original strand, 14505943 - 14506201
Alignment:
Q  8 tccaagaatatattcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagtttttataacacggtaattatcaaacaaa 107  Q
    ||||| |||||  ||||||||||||||||||||| |||||||||||||| |||||| |||||||||||||||||||||||||||  ||||||||||||||    
T  14505943 tccaacaatatgctcactttaacatttgttagactgattgatttagttgctcctttcaatatcaatgttagtttttataacacgacaattatcaaacaaa 14506042  T
Q  108 ataatatgatataccaacataaaataaatttctgcattcaggatgagtttgagtatgagttcgggttagatacctatatatacattacccgtctcttact 207  Q
    ||||  ||| ||| ||||| ||| ||  ||||||||||  ||| | |||| |||||| ||||||| | | |||||| |||    ||||||||| | |||     
T  14506043 ataacgtgacatatcaacacaaagtagttttctgcatttgggacgggtttaagtatgggttcggggtgggtacctaaatacttgttacccgtcccatacc 14506142  T
Q  208 cgtgttttgaaatcggg------ccaaactcaatcaaaatggagaaaatccgtcaaatt 260  Q
     ||||||||||||||||      |||||| || ||||||||| ||||| ||||||||||    
T  14506143 tgtgttttgaaatcggggaaaacccaaacccagtcaaaatggggaaaacccgtcaaatt 14506201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 21 - 224
Target Start/End: Complemental strand, 12678311 - 12678109
Alignment:
Q  21 tcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagtttttataacacggtaattatcaaacaaaataatatgatata 120  Q
    |||||||||| ||| ||||||||||||||||||||| ||||||||||||||||| || |||||||||||||  |||||||||||||||||| |||| |||    
T  12678311 tcactttaac-tttattagaccgattgatttagttgctcctttaaatatcaatgataatttttataacacgacaattatcaaacaaaataacatgacata 12678213  T
Q  121 ccaacataaaataaatttctgcattcaggatgagtttgagtatgagttcgggttagatacctatatatacattacccgtctcttactcgtgttttgaaat 220  Q
     ||| ||||||||| |||||  |||| ||| | ||||| ||||| |||| || | | ||||||||||  | ||||||||| | |||  |||| |||||||    
T  12678212 tcaatataaaataattttctcaattcgggacgggtttgggtatgggttcagggtgggtacctatataccctttacccgtcccatacctgtgtcttgaaat 12678113  T
Q  221 cggg 224  Q
    ||||    
T  12678112 cggg 12678109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 8 - 130
Target Start/End: Original strand, 30816114 - 30816236
Alignment:
Q  8 tccaagaatatattcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagtttttataacacggtaattatcaaacaaa 107  Q
    ||||| ||||| | |||||||||||||||||||||||||||||||| || |||||||||| |||||| ||||||||||||||||| ||||||| ||||||    
T  30816114 tccaacaatatgtacactttaacatttgttagaccgattgatttaggtgctcctttaaatgtcaatggtagtttttataacacggcaattatccaacaaa 30816213  T
Q  108 ataatatgatataccaacataaa 130  Q
    |||| || | ||| |||||||||    
T  30816214 ataacatcacatatcaacataaa 30816236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 21 - 111
Target Start/End: Complemental strand, 14411051 - 14410961
Alignment:
Q  21 tcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagtttttataacacggtaattatcaaacaaaataa 111  Q
    |||||||||||||||||||||||||||||||||||  ||||||||||||||||| | ||||||||||||||  ||||||||||||||||||    
T  14411051 tcactttaacatttgttagaccgattgatttagtttctcctttaaatatcaatgatggtttttataacacgacaattatcaaacaaaataa 14410961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 21 - 224
Target Start/End: Original strand, 32853713 - 32853917
Alignment:
Q  21 tcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagttttta-taacacggtaattatcaaacaaaataatatgatat 119  Q
    ||||||| |||||||||||||  | ||||||||||| || |||||||||||||| ||||||||| ||||| || |||||||||||||||||| || | ||    
T  32853713 tcactttcacatttgttagacaaaatgatttagttgatcatttaaatatcaatggtagtttttattaacatggcaattatcaaacaaaataacataacat 32853812  T
Q  120 accaacataaaataaatttctgcattcaggatgagtttgagtatgagttcgggttagatacctatatatacattacccgtctcttactcgtgttttgaaa 219  Q
    | ||||||||| ||| ||| | ||||  ||| | ||||| ||||| ||||||| | | ||||||||||  | ||||||||| | ||| |||||||||| |    
T  32853813 atcaacataaagtaattttttacatttgggacgggtttgggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgttttgaga 32853912  T
Q  220 tcggg 224  Q
    |||||    
T  32853913 tcggg 32853917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 21 - 187
Target Start/End: Complemental strand, 10188292 - 10188125
Alignment:
Q  21 tcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagttttta-taacacggtaattatcaaacaaaataatatgatat 119  Q
    ||||||| |||||||||||||  | ||||||||||| ||||||||||||||||| ||||||||| ||||| |  ||||||| |||||||||| || ||||    
T  10188292 tcactttcacatttgttagacaaaatgatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcgaacaaaataacataatat 10188193  T
Q  120 accaacataaaataaatttctgcattcaggatgagtttgagtatgagttcgggttagatacctatata 187  Q
    | ||||||||||||| ||| | ||||  ||||| ||||| ||||| ||||||| | | ||||||||||    
T  10188192 atcaacataaaataattttttacatttgggatgggtttgggtatgggttcggggtgggtacctatata 10188125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 8 - 224
Target Start/End: Complemental strand, 5863615 - 5863398
Alignment:
Q  8 tccaagaatatattcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagttttta-taacacggtaattatcaaacaa 106  Q
    ||||| |||| | ||||||| |||||| ||||||  | ||||||||||| ||||||||||||||||| ||||||||| ||||| | ||||||||||||||    
T  5863615 tccaataataaactcactttcacattttttagacaaaatgatttagttgatcctttaaatatcaatggtagtttttattaacatgataattatcaaacaa 5863516  T
Q  107 aataatatgatataccaacataaaataaatttctgcattcaggatgagtttgagtatgagttcgggttagatacctatatatacattacccgtctcttac 206  Q
    ||||| || | ||| ||||||||||||  ||| | ||||  ||| | ||||| ||||| ||||| | | | || |||||||  | ||||||||| | |||    
T  5863515 aataacataacatatcaacataaaatatttttttacatttgggacgggtttgggtatgggttcgaggtgggtatctatatacccgttacccgtcccatac 5863416  T
Q  207 tcgtgttttgaaatcggg 224  Q
     |||||||||||||||||    
T  5863415 ccgtgttttgaaatcggg 5863398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 21 - 224
Target Start/End: Complemental strand, 10142737 - 10142533
Alignment:
Q  21 tcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagttttta-taacacggtaattatcaaacaaaataatatgatat 119  Q
    ||||||| |||||||||||||  | ||||||||||| ||||||||||||||||| ||||||||| ||||| |  |||||||||||||||||| || | ||    
T  10142737 tcactttcacatttgttagacaaaatgatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataacataacat 10142638  T
Q  120 accaacataaaataaatttctgcattcaggatgagtttgagtatgagttcgggttagatacctatatatacattacccgtctcttactcgtgttttgaaa 219  Q
    | ||||||||||||| ||| | ||||  |||   ||||| ||||||||||||| | | ||||||||||  | ||||| ||| | ||| ||| |||||| |    
T  10142637 atcaacataaaataattttttacatttgggacaggtttgggtatgagttcggggtgggtacctatatacccgttacctgtcccatacccgttttttgaga 10142538  T
Q  220 tcggg 224  Q
    |||||    
T  10142537 tcggg 10142533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 48 - 224
Target Start/End: Original strand, 11762342 - 11762518
Alignment:
Q  48 atttagttgttcctttaaatatcaatgttagtttttataacacggtaattatcaaacaaaataatatgatataccaacataaaataaatttctgcattca 147  Q
    ||||||||| |||| |||||||||||| ||||||||||||||||  ||||||  |||||||||| |||  ||| ||||||||| ||| ||||| ||||      
T  11762342 atttagttgctcctataaatatcaatggtagtttttataacacgacaattatataacaaaataacatggcatatcaacataaagtaattttctacatttg 11762441  T
Q  148 ggatgagtttgagtatgagttcgggttagatacctatatatacattacccgtctcttactcgtgttttgaaatcggg 224  Q
    ||||| ||||| ||||||||||||| | || |||||||||  | ||||||||| | ||| | ||||| |||||||||    
T  11762442 ggatgggtttgggtatgagttcggggtggacacctatatacccgttacccgtcccatacccttgtttagaaatcggg 11762518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 14 - 116
Target Start/End: Original strand, 14245110 - 14245212
Alignment:
Q  14 aatatattcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagtttttataacacggtaattatcaaacaaaataata 113  Q
    ||||| ||||||||||||||| ||||||||| ||||||||| | |||||||||||| |||| ||||||||||||||||  |||| ||||||||||||| |    
T  14245110 aatatgttcactttaacatttattagaccgaatgatttagtcgctcctttaaatattaatggtagtttttataacacgacaattttcaaacaaaataaca 14245209  T
Q  114 tga 116  Q
    |||    
T  14245210 tga 14245212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 21 - 224
Target Start/End: Original strand, 2367195 - 2367399
Alignment:
Q  21 tcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagttttta-taacacggtaattatcaaacaaaataatatgatat 119  Q
    |||||||||||||||||||||  | ||||||||||  ||||||||||||||||| ||||||||| ||||| |  |||||||||||||||||| || | ||    
T  2367195 tcactttaacatttgttagacaaaatgatttagtttatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataacataacat 2367294  T
Q  120 accaacataaaataaatttctgcattcaggatgagtttgagtatgagttcgggttagatacctatatatacattacccgtctcttactcgtgttttgaaa 219  Q
    | | ||||||| ||| ||| | ||||  ||| | ||||| ||||| ||||||| | | ||| ||||||  | ||||||||| | ||| |||||||||| |    
T  2367295 atccacataaagtaattttttccatttgggacgggtttgggtatgggttcggggtgggtacttatatacccgttacccgtcccatacccgtgttttgaga 2367394  T
Q  220 tcggg 224  Q
    |||||    
T  2367395 tcggg 2367399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 21 - 187
Target Start/End: Original strand, 12141254 - 12141421
Alignment:
Q  21 tcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagttttta-taacacggtaattatcaaacaaaataatatgatat 119  Q
    ||||||| |||||||||||||  | ||||||||||| ||||||||||||||||||||||||||| ||| | |  |||||||||||||||||| || |  |    
T  12141254 tcactttcacatttgttagacaaaatgatttagttgatcctttaaatatcaatgttagtttttattaagatgacaattatcaaacaaaataacataacgt 12141353  T
Q  120 accaacataaaataaatttctgcattcaggatgagtttgagtatgagttcgggttagatacctatata 187  Q
    | ||||||||||||| ||| | ||||  ||| | ||||| ||||| ||||||| | | ||||||||||    
T  12141354 atcaacataaaataattttttacatttgggacgggtttgggtatgggttcggggtgggtacctatata 12141421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 23 - 224
Target Start/End: Original strand, 24225569 - 24225771
Alignment:
Q  23 actttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagttttta-taacacggtaattatcaaacaaaataatatgatatac 121  Q
    ||||| |||||||||||||  | | ||||||||| ||||||||||||||||| ||||||||| ||||| |  |||||||||||||||||| || | |||     
T  24225569 actttcacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataacataacatat 24225668  T
Q  122 caacataaaataaatttctgcattcaggatgagtttgagtatgagttcgggttagatacctatatatacattacccgtctcttactcgtgttttgaaatc 221  Q
    ||||||||||||| ||| | ||||  ||| | ||||| | ||| ||||||| | | ||||||||||  | ||||||||| | ||  |||||||||| |||    
T  24225669 caacataaaataattttttacatttgggacgggtttgggcatgggttcggggtgggtacctatatacccgttacccgtcccatatccgtgttttgagatc 24225768  T
Q  222 ggg 224  Q
    |||    
T  24225769 ggg 24225771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 14 - 130
Target Start/End: Original strand, 14254821 - 14254937
Alignment:
Q  14 aatatattcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagtttttataacacggtaattatcaaacaaaataata 113  Q
    ||||| || |||||||||||| ||||||||| ||||||| | | ||||||||||||||||| |||||||||||||||   || | ||||||||||||| |    
T  14254821 aatatgttgactttaacatttattagaccgaatgatttaatcgctcctttaaatatcaatgatagtttttataacacatcaaatttcaaacaaaataaca 14254920  T
Q  114 tgatataccaacataaa 130  Q
    ||| ||| |||||||||    
T  14254921 tgacatatcaacataaa 14254937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 46 - 224
Target Start/End: Original strand, 27738666 - 27738845
Alignment:
Q  46 tgatttagttgttcctttaaatatcaatgttagttttta-taacacggtaattatcaaacaaaataatatgatataccaacataaaataaatttctgcat 144  Q
    ||||||||||| ||||||||||||||||| ||||||||| ||||| |  |||||||| ||||||||| || | ||| ||||||||| ||| ||| | |||    
T  27738666 tgatttagttgctcctttaaatatcaatggtagtttttattaacatgacaattatcatacaaaataacataacatatcaacataaagtaattttttacat 27738765  T
Q  145 tcaggatgagtttgagtatgagttcgggttagatacctatatatacattacccgtctcttactcgtgttttgaaatcggg 224  Q
    |  ||| | ||||| ||||| ||||||| | | ||| |||||||   ||||||||| | ||| |||||||||||||||||    
T  27738766 ttgggacgggtttgggtatgggttcggggtgggtacatatatatctgttacccgtcccatacccgtgttttgaaatcggg 27738845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 20 - 233
Target Start/End: Original strand, 27534552 - 27534766
Alignment:
Q  20 ttcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagttttta-taacacggtaattatcaaacaaaataatatgata 118  Q
    |||||||| |||||||||||||  | | ||||||||| | ||||||||||||||| ||||||||| ||||| |  |||||||||||||||||| || | |    
T  27534552 ttcactttcacatttgttagacaaaattatttagttgattctttaaatatcaatgatagtttttattaacatgacaattatcaaacaaaataacataaca 27534651  T
Q  119 taccaacataaaataaatttctgcattcaggatgagtttgagtatgagttcgggttagatacctatatatacattacccgtctcttactcgtgttttgaa 218  Q
    || ||||||||| ||  ||| | ||||  ||| | ||||| |||||  |||||| | | ||||||||||  | ||||||||| | ||| ||||||| ||     
T  27534652 tatcaacataaagtagttttttacatttgggacgggtttgggtatggattcggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgag 27534751  T
Q  219 atcgggccaaactca 233  Q
    ||||||  |||||||    
T  27534752 atcggggaaaactca 27534766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 8 - 85
Target Start/End: Original strand, 32532420 - 32532497
Alignment:
Q  8 tccaagaatatattcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagtttttat 85  Q
    ||||| |||||  ||||||||||||||||||||| || ||||||||||| |||||||||||||| || ||||||||||    
T  32532420 tccaataatatgctcactttaacatttgttagacggaatgatttagttggtcctttaaatatcattggtagtttttat 32532497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 22 - 83
Target Start/End: Original strand, 32052927 - 32052988
Alignment:
Q  22 cactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagttttt 83  Q
    |||||||||||||||||||| || ||||||| ||  |||||||||||||||||| |||||||    
T  32052927 cactttaacatttgttagacggaatgatttatttaatcctttaaatatcaatgtaagttttt 32052988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 21 - 85
Target Start/End: Complemental strand, 3484142 - 3484078
Alignment:
Q  21 tcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagtttttat 85  Q
    ||||||| |||||||||||||  | | ||||||||| ||||||||||||||||| ||||||||||    
T  3484142 tcactttcacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttat 3484078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 64 - 130
Target Start/End: Original strand, 32053000 - 32053067
Alignment:
Q  64 aaatatcaatgttagtttttat-aacacggtaattatcaaacaaaataatatgatataccaacataaa 130  Q
    |||||||| ||| ||||||||| |||| | ||||||||||||||||||| |||| ||| |||||||||    
T  32053000 aaatatcattgtaagtttttattaacatgataattatcaaacaaaataacatgacatatcaacataaa 32053067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 157 - 224
Target Start/End: Original strand, 32532546 - 32532613
Alignment:
Q  157 tgagtatgagttcgggttagatacctatatatacattacccgtctcttactcgtgttttgaaatcggg 224  Q
    |||||||| ||||||| | | ||||||||||  ||||||||||| | ||| |||||||||||||||||    
T  32532546 tgagtatgggttcggggtgggtacctatatacccattacccgtcccatacccgtgttttgaaatcggg 32532613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 14 - 79
Target Start/End: Original strand, 12309441 - 12309506
Alignment:
Q  14 aatatattcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagt 79  Q
    ||||| || |||||||||||||||||||  | ||||||| |||  |||||||||||||||| ||||    
T  12309441 aatatgtttactttaacatttgttagacgaaatgatttaattgcccctttaaatatcaatgatagt 12309506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 101; Significance: 9e-50; HSPs: 40)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 101; E-Value: 9e-50
Query Start/End: Original strand, 8 - 220
Target Start/End: Original strand, 53631761 - 53631973
Alignment:
Q  8 tccaagaatatattcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagtttttataacacggtaattatcaaacaaa 107  Q
    ||||| |||||  |||||||| |||||||||||||||| |||||||||| ||||||||||||||||| ||||||||||||||||| ||||||||||||||    
T  53631761 tccaacaatatgctcactttatcatttgttagaccgatcgatttagttgctcctttaaatatcaatggtagtttttataacacggcaattatcaaacaaa 53631860  T
Q  108 ataatatgatataccaacataaaataaatttctgcattcaggatgagtttgagtatgagttcgggttagatacctatatatacattacccgtctcttact 207  Q
    |||| |||  ||| ||||||||| ||| |||||  |||| ||| ||||||||||||| ||||||| | | ||||||||||  | ||||||||||| |||     
T  53631861 ataacatggcatatcaacataaagtaattttctagattcgggacgagtttgagtatgggttcggggtgggtacctatatacccgttacccgtctcataca 53631960  T
Q  208 cgtgttttgaaat 220  Q
    |||||||| ||||    
T  53631961 cgtgttttaaaat 53631973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 8 - 224
Target Start/End: Complemental strand, 4557536 - 4557320
Alignment:
Q  8 tccaagaatatattcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagtttttataacacggtaattatcaaacaaa 107  Q
    ||||| ||||| ||||||||||||||||||||||||||| ||||||||| ||||||||||||||||  |||||||||||||||   ||||||||||||||    
T  4557536 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttataacacatcaattatcaaacaaa 4557437  T
Q  108 ataatatgatataccaacataaaataaatttctgcattcaggatgagtttgagtatgagttcgggttagatacctatatatacattacccgtctcttact 207  Q
    |||| |||| ||| ||||||||| ||| ||||||||||| ||||   |||| ||||| ||||||| | | ||||||||||  | ||||||||| | |||     
T  4557436 ataacatgacatatcaacataaagtaattttctgcattcgggatagatttgggtatgggttcggggtgggtacctatatactcgttacccgtcccatacc 4557337  T
Q  208 cgtgttttgaaatcggg 224  Q
    | |||||||||| ||||    
T  4557336 catgttttgaaaacggg 4557320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 8 - 224
Target Start/End: Complemental strand, 4016275 - 4016059
Alignment:
Q  8 tccaagaatatattcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagtttttataacacggtaattatcaaacaaa 107  Q
    ||||| ||||| ||||||||||||||||||||||||||| ||||||||| ||||||||||||| ||  |||||||||||||||   ||||||||||||||    
T  4016275 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcgatagtagtttttataacacatcaattatcaaacaaa 4016176  T
Q  108 ataatatgatataccaacataaaataaatttctgcattcaggatgagtttgagtatgagttcgggttagatacctatatatacattacccgtctcttact 207  Q
    |||| |||| ||| ||||||||  ||  ||||||||||| ||| ||||||| ||||| ||||||  | | ||||||||||  | ||| ||||| | |||     
T  4016175 ataacatgacatatcaacataaggtagttttctgcattcgggacgagtttgggtatgggttcggagtgggtacctatatacccgttatccgtcccatacc 4016076  T
Q  208 cgtgttttgaaatcggg 224  Q
    | |||||||||||||||    
T  4016075 catgttttgaaatcggg 4016059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 8 - 200
Target Start/End: Complemental strand, 31127026 - 31126834
Alignment:
Q  8 tccaagaatatattcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagtttttataacacggtaattatcaaacaaa 107  Q
    ||||| |||||  ||||||||||||||||||||| |||||||||||||| |||||| ||||||||||||||||||||||| |||  ||||||||||||||    
T  31127026 tccaacaatatgctcactttaacatttgttagactgattgatttagttgctcctttcaatatcaatgttagtttttataatacgacaattatcaaacaaa 31126927  T
Q  108 ataatatgatataccaacataaaataaatttctgcattcaggatgagtttgagtatgagttcgggttagatacctatatatacattacccgtc 200  Q
    |||| |||  ||| ||||| ||  ||  ||||||||||  ||| ||||||| ||||||||||||| | |||||||||||| |  |||||||||    
T  31126926 ataacatggcatatcaacacaatgtagttttctgcatttgggacgagtttgggtatgagttcggggtggatacctatatacatgttacccgtc 31126834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 25 - 224
Target Start/End: Original strand, 42758248 - 42758447
Alignment:
Q  25 tttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagtttttataacacggtaattatcaaacaaaataatatgatataccaa 124  Q
    ||||||||||||||||||| |||||||| ||| ||||||||||||||||| |||||||||||||| || |||||||||||||||||| |||  ||| |||    
T  42758248 tttaacatttgttagaccggttgatttaattgctcctttaaatatcaatgatagtttttataacatggcaattatcaaacaaaataacatggcatatcaa 42758347  T
Q  125 cataaaataaatttctgcattcaggatgagtttgagtatgagttcgggttagatacctatatatacattacccgtctcttactcgtgttttgaaatcggg 224  Q
    |||||| ||| ||||| | ||| ||| | ||||| ||||| ||||||| |  |||||||||||    ||||||||| | |||  ||||||||||||||||    
T  42758348 cataaagtaattttcttcgttcgggacgggtttgggtatgggttcggggtgcatacctatatacctgttacccgtcccatacctgtgttttgaaatcggg 42758447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 21 - 167
Target Start/End: Complemental strand, 41937220 - 41937074
Alignment:
Q  21 tcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagtttttataacacggtaattatcaaacaaaataatatgatata 120  Q
    ||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| |||||||||||  ||||||||||||||||||||||| ||     
T  41937220 tcactttaacatttgttagaccgattgatttagttgttcatttcaatatcaatgttagtctttataacacgacaattatcaaacaaaataatatgacatg 41937121  T
Q  121 ccaacataaaataaatttctgcattcaggatgagtttgagtatgagt 167  Q
     ||||| ||| ||  ||||||||||   || ||||||| ||||||||    
T  41937120 tcaacacaaagtagttttctgcatttgagacgagtttgggtatgagt 41937074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 14 - 163
Target Start/End: Original strand, 30682684 - 30682833
Alignment:
Q  14 aatatattcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagtttttataacacggtaattatcaaacaaaataata 113  Q
    ||||| ||||||||||||||||||||| ||| ||||||| ||| ||||||||||||||||| |||||||||||||| |   ||||||||||||||||| |    
T  30682684 aatatgttcactttaacatttgttagaacgaatgatttaattgctcctttaaatatcaatgatagtttttataacatgaccattatcaaacaaaataaca 30682783  T
Q  114 tgatataccaacataaaataaatttctgcattcaggatgagtttgagtat 163  Q
    ||| ||| ||||||||| ||| ||||| ||||||||| | ||||||||||    
T  30682784 tgacatatcaacataaagtaattttctacattcaggacgggtttgagtat 30682833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 8 - 234
Target Start/End: Original strand, 34119515 - 34119739
Alignment:
Q  8 tccaagaatatattcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagtttttataacacggtaattatcaaacaaa 107  Q
    ||||| |||||  |||||||||||||||||||||||||||||||||||| || ||| |||||||||||||||||||||||||||  ||||||||||||||    
T  34119515 tccaacaatatgctcactttaacatttgttagaccgattgatttagttgctcatttcaatatcaatgttagtttttataacacgacaattatcaaacaaa 34119614  T
Q  108 ataatatgatataccaacataaaataaatttctgcattcaggatgagtttgagtatgagttcgggttagatacctatatatacattacccgtctcttact 207  Q
    |||  |||  ||| ||||| ||| ||  ||||||||||  ||| |  |||| ||||| ||||||| | | ||||||||||    ||| ||||||| |||     
T  34119615 ata--atggcatatcaacacaaagtagttttctgcatttgggacggatttgggtatgggttcggggtgggtacctatatacctgttatccgtctcatacc 34119712  T
Q  208 cgtgttttgaaatcgggccaaactcaa 234  Q
    |||||||| ||||||||  ||||||||    
T  34119713 cgtgttttaaaatcgggaaaaactcaa 34119739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 21 - 233
Target Start/End: Complemental strand, 22536060 - 22535847
Alignment:
Q  21 tcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagttttta-taacacggtaattatcaaacaaaataatatgatat 119  Q
    ||||||||||||||||||||| || ||||||||||| ||||||||||||||||| ||||||||| ||||| |  |||||||||||||||||| |||| ||    
T  22536060 tcactttaacatttgttagacagaatgatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataacatgacat 22535961  T
Q  120 accaacataaaataaatttctgcattcaggatgagtttgagtatgagttcgggttagatacctatatatacattacccgtctcttactcgtgttttgaaa 219  Q
    | ||||||||||||| ||| | |||| |||| |||| || ||||| ||||||| | | | ||| ||||  | ||||||||| | ||  ||||||||||||    
T  22535960 atcaacataaaataattttttacatttaggacgagtatgtgtatgggttcggggtgggtgcctgtatacccgttacccgtcccatatccgtgttttgaaa 22535861  T
Q  220 tcgggccaaactca 233  Q
    | |||  |||||||    
T  22535860 ttggggaaaactca 22535847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 25 - 234
Target Start/End: Original strand, 54317018 - 54317227
Alignment:
Q  25 tttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagtttttataacacggtaattatcaaacaaaataatatgatataccaa 124  Q
    |||||||||||||||||   |||||||||||| ||||||||||||||||  ||||||||||||||||| |||||||||||||||||| |||  ||| |||    
T  54317018 tttaacatttgttagacatgttgatttagttgctcctttaaatatcaatagtagtttttataacacggcaattatcaaacaaaataacatggcatatcaa 54317117  T
Q  125 cataaaataaatttctgcattcaggatgagtttgagtatgagttcgggttagatacctatatatacattacccgtctcttactcgtgttttgaaatcggg 224  Q
    |||||| ||| ||||| | ||  ||| | ||||| | ||| ||||||| | | ||||||||||  | |||||||||   |||| ||||||||||||||||    
T  54317118 cataaagtaattttcttcgtttgggacgggtttgggaatgggttcggggtgggtacctatatacccgttacccgtcctatacttgtgttttgaaatcggg 54317217  T
Q  225 ccaaactcaa 234  Q
      ||||||||    
T  54317218 gaaaactcaa 54317227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 8 - 224
Target Start/End: Complemental strand, 48391048 - 48390832
Alignment:
Q  8 tccaagaatatattcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagtttttataacacggtaattatcaaacaaa 107  Q
    ||||| ||||| ||||||| |||||||||||||| || ||||||||||| || |||||||||||||| |||||||| ||||| |  ||||||||||||||    
T  48391048 tccaacaatatgttcacttcaacatttgttagacggaatgatttagttgatcttttaaatatcaatggtagtttttttaacatgacaattatcaaacaaa 48390949  T
Q  108 ataatatgatataccaacataaaataaatttctgcattcaggatgagtttgagtatgagttcgggttagatacctatatatacattacccgtctcttact 207  Q
    |||| |||| ||| ||||||||| ||| ||| | | ||| ||| | || || ||||| |||| || | | |||||||||   | ||||||||| | |||     
T  48390948 ataacatgacatatcaacataaagtaattttttacgttcgggacgggtatgggtatgggttcaggatgggtacctatattcccgttacccgtcccatacc 48390849  T
Q  208 cgtgttttgaaatcggg 224  Q
    |||||||||||||||||    
T  48390848 cgtgttttgaaatcggg 48390832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 8 - 233
Target Start/End: Original strand, 43582434 - 43582659
Alignment:
Q  8 tccaagaatatattcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagttttta-taacacggtaattatcaaacaa 106  Q
    ||||| |||||  |||||||||||||||||||||  | ||||||||||| ||| ||||||||||||| ||||||||| | ||| | ||||||||||||||    
T  43582434 tccaacaatatgctcactttaacatttgttagacgtaatgatttagttgatccgttaaatatcaatggtagtttttatttacatgataattatcaaacaa 43582533  T
Q  107 aataatatgatataccaacataaaataaatttctgcattcaggatgagtttgagtatgagttcgggttagatacctatatatacattacccgtctcttac 206  Q
    ||||| |||| ||| ||| ||||| ||| ||| | ||||  ||| | || ||| |||| ||||||| | | |||||| ||| || ||||||||||| |||    
T  43582534 aataacatgacatatcaatataaagtaattttttacatttgggacgggtatgaatatgggttcggg-tgggtacctacatacacgttacccgtctcatac 43582632  T
Q  207 tcgtgttttgaaatcgggccaaactca 233  Q
     |||||||||||||||||  |||||||    
T  43582633 ccgtgttttgaaatcggggaaaactca 43582659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 8 - 145
Target Start/End: Original strand, 19111592 - 19111728
Alignment:
Q  8 tccaagaatatattcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagtttttataacacggtaattatcaaacaaa 107  Q
    ||||| |||||  |||||||||||||||||| ||| ||||||||||||  ||||||||||||||||| ||||||||||||||||  ||||||||||||||    
T  19111592 tccaacaatatgatcactttaacatttgttataccaattgatttagttactcctttaaatatcaatggtagtttttataacacgaaaattatcaaacaaa 19111691  T
Q  108 ataatatgatataccaacataaaataaatttctgcatt 145  Q
    |||| |||| |||  |||||||| ||| ||||| ||||    
T  19111692 ataacatgacata-taacataaagtaattttctacatt 19111728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 24 - 224
Target Start/End: Original strand, 34025826 - 34026027
Alignment:
Q  24 ctttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagtttttat-aacacggtaattatcaaacaaaataatatgatatacc 122  Q
    |||||||||||| ||||  || ||||||||||| ||||||||||||||||| || ||||||| |||| |  |||||||||||||||||| |||| ||| |    
T  34025826 ctttaacatttgatagatggaatgatttagttgatcctttaaatatcaatggtaatttttattaacatgacaattatcaaacaaaataacatgacatatc 34025925  T
Q  123 aacataaaataaatttctgcattcaggatgagtttgagtatgagttcgggttagatacctatatatacattacccgtctcttactcgtgttttgaaatcg 222  Q
    |||||||||||| ||| | ||||  ||| | || || ||||||||||||| | || |||||||||  | ||||||||| | |||  ||||||||||||||    
T  34025926 aacataaaataattttttacatttgggacgggtatgggtatgagttcggggtggaaacctatatactcgttacccgtcccatacctgtgttttgaaatcg 34026025  T
Q  223 gg 224  Q
    ||    
T  34026026 gg 34026027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 22 - 233
Target Start/End: Original strand, 23580698 - 23580909
Alignment:
Q  22 cactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagttttta-taacacggtaattatcaaacaaaataatatgatata 120  Q
    ||||||||||||||||| || || ||||||||||| ||||||||||||||||  ||||||||| ||||| |  |||||||||||||||||| || | |||    
T  23580698 cactttaacatttgttatacggaatgatttagttgatcctttaaatatcaatagtagtttttattaacatgacaattatcaaacaaaataacat-acata 23580796  T
Q  121 ccaacataaaataaatttctgcattcaggatgagtttgagtatgagttcgggttagatacctatatatacattacccgtctcttactcgtgttttgaaat 220  Q
     ||||||||||||| ||| | ||||  |||| ||| || ||||| ||||||  | | ||||||||||  | |||||||| || |||||||||||||||||    
T  23580797 tcaacataaaataattttttacatttgggataagtgtgggtatgggttcggagtgggtacctatatacccgttacccgtttcatactcgtgttttgaaat 23580896  T
Q  221 cgggccaaactca 233  Q
     |||  |||||||    
T  23580897 tggggaaaactca 23580909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 8 - 215
Target Start/End: Complemental strand, 44107024 - 44106816
Alignment:
Q  8 tccaagaatatattcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagtttttat-aacacggtaattatcaaacaa 106  Q
    ||||| |||| | ||||||| |||||||| ||||  | ||||||||||| ||||||||||||||||| |||||||||| |||| |  |||||||||||||    
T  44107024 tccaacaataaactcactttcacatttgtaagacaaaatgatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaa 44106925  T
Q  107 aataatatgatataccaacataaaataaatttctgcattcaggatgagtttgagtatgagttcgggttagatacctatatatacattacccgtctcttac 206  Q
    ||||| || | |||  |||||||| ||| ||| | ||||  ||| | ||||||||||| ||||||| ||||||||||||||| | |||| |||| | |||    
T  44106924 aataacataacatattaacataaagtaattttttacatttgggacgggtttgagtatgggttcggggtagatacctatatatccgttacgcgtcccatac 44106825  T
Q  207 tcgtgtttt 215  Q
     ||||||||    
T  44106824 ccgtgtttt 44106816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 21 - 224
Target Start/End: Original strand, 830879 - 831081
Alignment:
Q  21 tcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagtttttataacacggtaattatcaaacaaaataatatgatata 120  Q
    |||| ||||||||| ||||||| ||||||||||||  ||||| ||||||||||| |||||||||||| |||| |||||||||||||||||| ||   |||    
T  830879 tcacgttaacattttttagaccaattgatttagtttctccttaaaatatcaatgatagtttttataagacggcaattatcaaacaaaataacatagcata 830978  T
Q  121 ccaacataaaataaatttctgcattcaggatgagtttgagtatgagttcgggttagatacctatatatacattacccgtctcttactcgtgttttgaaat 220  Q
      |||||||| ||| ||||||||||| ||| || |||| ||||| |||| || | | |||| |||||  | ||| ||||||| ||| ||||||||||||     
T  830979 ttaacataaagtaattttctgcattcgggacgaatttgggtatgggttcagggtgggtacc-atatactcgttatccgtctcatacccgtgttttgaaaa 831077  T
Q  221 cggg 224  Q
    ||||    
T  831078 cggg 831081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 21 - 224
Target Start/End: Complemental strand, 44953654 - 44953450
Alignment:
Q  21 tcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagttttta-taacacggtaattatcaaacaaaataatatgatat 119  Q
    ||||||| |||||||||||||  | | ||||||||| ||||||||||||||||| ||||||||| ||||| |  |||||||||||||||||| || | ||    
T  44953654 tcactttcacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataacataacat 44953555  T
Q  120 accaacataaaataaatttctgcattcaggatgagtttgagtatgagttcgggttagatacctatatatacattacccgtctcttactcgtgttttgaaa 219  Q
    | ||||||||| ||  ||| | ||||  ||| | ||||||||||||||||||| |   ||||||||||  | ||||||||| | ||| |||||||||| |    
T  44953554 atcaacataaagtagttttttacatttgggacgggtttgagtatgagttcggggtgagtacctatatacccgttacccgtcccatacccgtgttttgaga 44953455  T
Q  220 tcggg 224  Q
    |||||    
T  44953454 tcggg 44953450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 22 - 199
Target Start/End: Original strand, 20086879 - 20087056
Alignment:
Q  22 cactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagttttta-taacacggtaattatcaaacaaaataatatgatata 120  Q
    |||||||||||||||||||  || ||||||||||| ||||||||||||||||| ||||||||| ||||| |  ||||||||| |||||||| |||| |||    
T  20086879 cactttaacatttgttagatggaatgatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaagcaaaataacatgacata 20086978  T
Q  121 ccaacataaaataaatttctgcattcaggatgagtttgagtatgagttcgggttagatacctatatatacattacccgt 199  Q
     ||||||||||||| ||| | ||||  ||| | || |||||| | ||||||| | | ||||||||||  ||||||||||    
T  20086979 tcaacataaaataattttttacatttgggacgggtatgagta-gggttcggggtgggtacctatatacccattacccgt 20087056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 8 - 217
Target Start/End: Original strand, 44639131 - 44639340
Alignment:
Q  8 tccaagaatatattcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagttttta-taacacggtaattatcaaacaa 106  Q
    ||||| |||| ||||||||| ||||||||||||   || |||||||||| ||||||||||||||||| ||||||||| ||||| |  |||||||||||||    
T  44639131 tccaataataaattcactttcacatttgttagataaat-gatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaa 44639229  T
Q  107 aataatatgatataccaacataaaataaatttctgcattcaggatgagtttgagtatgagttcgggttagatacctatatatacattacccgtctcttac 206  Q
    ||||| || | ||| ||||||||||||| ||| | ||||  | | | ||||| ||||| ||||||| | | ||||||||||  | ||||||||| | |||    
T  44639230 aataacataacatatcaacataaaataattttttacatttggaacgggtttgggtatgggttcggggtgggtacctatatacccgttacccgtcccatac 44639329  T
Q  207 tcgtgttttga 217  Q
     ||||||||||    
T  44639330 ccgtgttttga 44639340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 23 - 187
Target Start/End: Complemental strand, 17146367 - 17146202
Alignment:
Q  23 actttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagttttta-taacacggtaattatcaaacaaaataatatgatatac 121  Q
    ||||| |||||||||||||  | ||||||||||| ||||||||||||||||| ||||||||| ||||| |  |||||||||||||||||| || | |||     
T  17146367 actttcacatttgttagacaaaatgatttagttgatcctttaaatatcaatgatagtttttattaacatgacaattatcaaacaaaataacataacatat 17146268  T
Q  122 caacataaaataaatttctgcattcaggatgagtttgagtatgagttcgggttagatacctatata 187  Q
    ||||||||| ||| ||| | ||||  ||| | ||||| ||||| ||||||| | ||||||||||||    
T  17146267 caacataaagtaattttttacatttgggaagggtttgtgtatgggttcggggtggatacctatata 17146202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 21 - 224
Target Start/End: Original strand, 44172495 - 44172699
Alignment:
Q  21 tcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagttttta-taacacggtaattatcaaacaaaataatatgatat 119  Q
    ||||||| |||||||||||||  | ||||||||||| |||||||||||||| || ||||||||| ||||| |  |||||||||||||||||| || | ||    
T  44172495 tcactttcacatttgttagacaaaatgatttagttgatcctttaaatatcagtggtagtttttattaacatgacaattatcaaacaaaataacataacat 44172594  T
Q  120 accaacataaaataaatttctgcattcaggatgagtttgagtatgagttcgggttagatacctatatatacattacccgtctcttactcgtgttttgaaa 219  Q
    | ||||||||| ||| ||| | ||||  ||| | ||||| ||||| ||||||| | | ||| ||||||  | ||||||||| | ||| |||||||||| |    
T  44172595 atcaacataaagtaattttttacatttgggacgggtttgggtatgggttcggggtgggtacttatatacccgttacccgtcccatacccgtgttttgaga 44172694  T
Q  220 tcggg 224  Q
    |||||    
T  44172695 tcggg 44172699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 21 - 224
Target Start/End: Original strand, 44179195 - 44179399
Alignment:
Q  21 tcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagttttta-taacacggtaattatcaaacaaaataatatgatat 119  Q
    ||||||| |||||||||||||  | ||||||||||| |||||||||||||| || ||||||||| ||||| |  |||||||||||||||||| || | ||    
T  44179195 tcactttcacatttgttagacaaaatgatttagttgatcctttaaatatcagtggtagtttttattaacatgacaattatcaaacaaaataacataacat 44179294  T
Q  120 accaacataaaataaatttctgcattcaggatgagtttgagtatgagttcgggttagatacctatatatacattacccgtctcttactcgtgttttgaaa 219  Q
    | ||||||||| ||| ||| | ||||  ||| | ||||| ||||| ||||||| | | ||| ||||||  | ||||||||| | ||| |||||||||| |    
T  44179295 atcaacataaagtaattttttacatttgggacgggtttgggtatgggttcggggtgggtacttatatacccgttacccgtcccatacccgtgttttgaga 44179394  T
Q  220 tcggg 224  Q
    |||||    
T  44179395 tcggg 44179399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 21 - 224
Target Start/End: Original strand, 49579933 - 49580137
Alignment:
Q  21 tcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagttttta-taacacggtaattatcaaacaaaataatatgatat 119  Q
    ||||||| |||||||||||||  | ||||||||||| ||||||||||||||||| ||||||||| ||||| |  ||| |||||||||||||| || | ||    
T  49579933 tcactttcacatttgttagacaaaatgatttagttgatcctttaaatatcaatggtagtttttattaacatgacaatcatcaaacaaaataacataacat 49580032  T
Q  120 accaacataaaataaatttctgcattcaggatgagtttgagtatgagttcgggttagatacctatatatacattacccgtctcttactcgtgttttgaaa 219  Q
    | ||| ||||| ||| ||| | ||||  ||| | ||||||||||| ||||| | | | ||||||||||  | ||||||||| | ||| |||||||||| |    
T  49580033 atcaatataaagtaattttttacatttgggacgggtttgagtatgggttcgaggtgggtacctatatactcgttacccgtcccatacccgtgttttgaga 49580132  T
Q  220 tcggg 224  Q
    |||||    
T  49580133 tcggg 49580137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 8 - 224
Target Start/End: Original strand, 29842164 - 29842381
Alignment:
Q  8 tccaagaatatattcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagttttta-taacacggtaattatcaaacaa 106  Q
    ||||| |||||  |||||| ||||||||||||||  | ||||||||||| ||||||||||||||||| ||||||||| ||||| |  |||||||||||||    
T  29842164 tccaacaatatgctcacttcaacatttgttagacgaaatgatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaa 29842263  T
Q  107 aataatatgatataccaacataaaataaatttctgcattcaggatgagtttgagtatgagttcgggttagatacctatatatacattacccgtctcttac 206  Q
    ||||| |||| | | ||||||||| ||| ||| | ||||   || | || |||||||| ||||||| | | |||||||||   | ||||| ||| | |||    
T  29842264 aataacatgacaaatcaacataaagtaattttttacatttgagacgggtatgagtatgggttcggggtgggtacctatattcccgttaccagtcccatac 29842363  T
Q  207 tcgtgttttgaaatcggg 224  Q
     |||||||| ||||||||    
T  29842364 ccgtgttttaaaatcggg 29842381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 8 - 111
Target Start/End: Original strand, 34154274 - 34154378
Alignment:
Q  8 tccaagaatatattcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagttttta-taacacggtaattatcaaacaa 106  Q
    ||||| ||||| |||||||||| |||||||||||  | ||||||||||| ||||||||||||||||| ||||||||| ||||| |  |||||||||||||    
T  34154274 tccaacaatatgttcactttaatatttgttagacataatgatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaa 34154373  T
Q  107 aataa 111  Q
    |||||    
T  34154374 aataa 34154378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 20 - 130
Target Start/End: Complemental strand, 10823913 - 10823802
Alignment:
Q  20 ttcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagttttta-taacacggtaattatcaaacaaaataatatgata 118  Q
    |||||||| |||||||||||||  | ||||||||||| ||||||||||||||||| ||||||||| ||||| |  |||||||||||||||||| || | |    
T  10823913 ttcactttcacatttgttagacaaaatgatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataacataaca 10823814  T
Q  119 taccaacataaa 130  Q
    || |||||||||    
T  10823813 tatcaacataaa 10823802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 21 - 111
Target Start/End: Original strand, 52198023 - 52198114
Alignment:
Q  21 tcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagttttta-taacacggtaattatcaaacaaaataa 111  Q
    ||||||| |||||||||||||  | ||||||||||| ||||||||||||||||| ||||||||| ||||| |  ||||||||||||||||||    
T  52198023 tcactttcacatttgttagacaaaatgatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataa 52198114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 21 - 130
Target Start/End: Complemental strand, 6738613 - 6738503
Alignment:
Q  21 tcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagttttta-taacacggtaattatcaaacaaaataatatgatat 119  Q
    |||||||||||| ||||||||  | ||||||| ||| |||||  |||||||||| ||||||||| ||||| || |||||||||||||||||| |||| ||    
T  6738613 tcactttaacatctgttagacataatgatttaattgatccttccaatatcaatggtagtttttattaacatggcaattatcaaacaaaataacatgacat 6738514  T
Q  120 accaacataaa 130  Q
    | |||||||||    
T  6738513 atcaacataaa 6738503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 21 - 130
Target Start/End: Original strand, 44252616 - 44252726
Alignment:
Q  21 tcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagttttta-taacacggtaattatcaaacaaaataatatgatat 119  Q
    ||||||| |||||||||||||  | | ||||||||| ||||||||||||||||| ||||||||| ||||| |  |||||||||||||||||| || | ||    
T  44252616 tcactttcacatttgttagacaaaattatttagttgatcctttaaatatcaatgatagtttttattaacatgacaattatcaaacaaaataacataacat 44252715  T
Q  120 accaacataaa 130  Q
    | |||||||||    
T  44252716 atcaacataaa 44252726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 21 - 222
Target Start/End: Original strand, 52572478 - 52572680
Alignment:
Q  21 tcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagttttta-taacacggtaattatcaaacaaaataatatgatat 119  Q
    ||||||| |||||||||||||  | ||||||||||| | ||||||||||||||| ||||||||| ||||| |  |||||||||||||||||| || | ||    
T  52572478 tcactttcacatttgttagacaaaatgatttagttgatactttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataacataacat 52572577  T
Q  120 accaacataaaataaatttctgcattcaggatgagtttgagtatgagttcgggttagatacctatatatacattacccgtctcttactcgtgttttgaaa 219  Q
    |  |||||||| ||| ||| | ||||  ||| | | |||||||||  |||||| | | | ||||||||  | ||||||||| | ||| |||||||||| |    
T  52572578 attaacataaagtaattttttacatttgggacgggcttgagtatggattcggggtgggtccctatatacccgttacccgtcccatacccgtgttttgaga 52572677  T
Q  220 tcg 222  Q
    |||    
T  52572678 tcg 52572680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 21 - 116
Target Start/End: Complemental strand, 48306755 - 48306659
Alignment:
Q  21 tcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagttttta-taacacggtaattatcaaacaaaataatatga 116  Q
    ||||||||| ||||||||||| || ||||||||||| | ||||||||||||||| ||||||||| ||||| |  |||||||||||||| ||| ||||    
T  48306755 tcactttaatatttgttagacggaatgatttagttgatactttaaatatcaatgatagtttttattaacatgacaattatcaaacaaattaacatga 48306659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 21 - 130
Target Start/End: Complemental strand, 39655492 - 39655382
Alignment:
Q  21 tcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagttttta-taacacggtaattatcaaacaaaataatatgatat 119  Q
    ||||||| ||||||||||||   | | ||||||||| ||||||||||||||||| ||||||||| ||||| |  |||||||||||||||||| || | ||    
T  39655492 tcactttcacatttgttagagaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataacataacat 39655393  T
Q  120 accaacataaa 130  Q
    | |||||||||    
T  39655392 atcaacataaa 39655382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 21 - 172
Target Start/End: Original strand, 39728540 - 39728692
Alignment:
Q  21 tcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagttttta-taacacggtaattatcaaacaaaataatatgatat 119  Q
    ||||||| |||||||||||||  | ||||||||||  || |||||||||||||| ||||||||| |||||    |||||||||||||||||| || | ||    
T  39728540 tcactttcacatttgttagacaaaatgatttagttaatcttttaaatatcaatgatagtttttattaacagaacaattatcaaacaaaataacattacat 39728639  T
Q  120 accaacataaaataaatttctgcattcaggatgagtttgagtatgagttcggg 172  Q
    | ||||||||| ||| ||| | ||||  ||| | ||||| ||||| |||||||    
T  39728640 atcaacataaagtaattttttacatttgggacgggtttgggtatgggttcggg 39728692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 21 - 224
Target Start/End: Original strand, 49025550 - 49025753
Alignment:
Q  21 tcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagttttta-taacacggtaattatcaaacaaaataatatgatat 119  Q
    ||||||| |||||| ||||||  | ||||||||||| ||||||||||||||||| ||||||||| |||||    |||||||||||||||||| || | ||    
T  49025550 tcactttcacatttattagacaaaatgatttagttgatcctttaaatatcaatggtagtttttattaacataacaattatcaaacaaaataacataacat 49025649  T
Q  120 accaacataaaataaatttctgcattcaggatgagtttgagtatgagttcgggttagatacctatatatacattacccgtctcttactcgtgttttgaaa 219  Q
    | ||||| ||| ||| ||| | ||||  ||| | ||||| ||||| |||||| |  | ||||||||||    ||||||||| | ||| |||||||||| |    
T  49025650 atcaacacaaagtaattttttacatttgggacgggtttgggtatgggttcggatgtg-tacctatatacctgttacccgtcccatacccgtgttttgaga 49025748  T
Q  220 tcggg 224  Q
    |||||    
T  49025749 tcggg 49025753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 21 - 111
Target Start/End: Complemental strand, 7469997 - 7469906
Alignment:
Q  21 tcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagttttta-taacacggtaattatcaaacaaaataa 111  Q
    ||||||| |||||||||||||  | | ||||||||| ||||||||||||||||| ||||||||| ||| | |  ||||||||||||||||||    
T  7469997 tcactttcacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaagatgacaattatcaaacaaaataa 7469906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 21 - 224
Target Start/End: Original strand, 29284205 - 29284409
Alignment:
Q  21 tcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagtttttat-aacacggtaattatcaaacaaaataatatgatat 119  Q
    ||||||| |||||||||| ||  | | ||||||||| || ||||||||| |||| |||||||||| |||| |  |||||||||||||||||| || | ||    
T  29284205 tcactttcacatttgttaaacaaaattatttagttgatcttttaaatattaatggtagtttttattaacatgacaattatcaaacaaaataacataacat 29284304  T
Q  120 accaacataaaataaatttctgcattcaggatgagtttgagtatgagttcgggttagatacctatatatacattacccgtctcttactcgtgttttgaaa 219  Q
    | ||||||||| ||  ||| | |||   ||| | ||||| ||||| ||||||| | | ||||||||||  | ||||||||| | ||| ||||||| || |    
T  29284305 atcaacataaagtagttttttacatctgggacgggtttgggtatgggttcgggctgggtacctatatacccgttacccgtcccatacccgtgtttcgaga 29284404  T
Q  220 tcggg 224  Q
    |||||    
T  29284405 tcggg 29284409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 21 - 111
Target Start/End: Complemental strand, 23547191 - 23547100
Alignment:
Q  21 tcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagttttta-taacacggtaattatcaaacaaaataa 111  Q
    ||||||| |||||||||| ||  | | ||||||||| |||||||||||| |||| ||||||||| ||||| |  ||||||||||||||||||    
T  23547191 tcactttcacatttgttaaacaaaattatttagttgatcctttaaatataaatgctagtttttattaacatgacaattatcaaacaaaataa 23547100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 25 - 91
Target Start/End: Complemental strand, 55438894 - 55438828
Alignment:
Q  25 tttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagtttttataacacg 91  Q
    |||||||||||||| | ||||||||||||||| ||||  ||||||| ||| ||||||| ||||||||    
T  55438894 tttaacatttgttaaagcgattgatttagttgctcctccaaatatcgatggtagttttaataacacg 55438828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 14 - 128
Target Start/End: Original strand, 14208264 - 14208377
Alignment:
Q  14 aatatattcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagtttttataacacggtaattatcaaacaaaataata 113  Q
    ||||| |||| ||||||||||  | ||| || |||||| |||| |||||||||||||||||  | ||||||||||| |  ||||||||||| |||||| |    
T  14208264 aatattttcattttaacatttccttgactgaatgattttgttgctcctttaaatatcaatgaca-tttttataacatgacaattatcaaaccaaataaca 14208362  T
Q  114 tgatataccaacata 128  Q
    |  |||| |||||||    
T  14208363 tagtatatcaacata 14208377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 98; Significance: 6e-48; HSPs: 50)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 8 - 224
Target Start/End: Original strand, 12980238 - 12980455
Alignment:
Q  8 tccaagaatatattcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagtttttataacacggtaattatcaaacaaa 107  Q
    ||||| ||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||  ||||||||||||||    
T  12980238 tccaacaatatgttcactttaacatttgttagaccgattgatttagttgctcctttaaatatcaatgatagtttttataacacgaaaattatcaaacaaa 12980337  T
Q  108 ataatatgatataccaacataaaata-aatttctgcattcaggatgagtttgagtatgagttcgggttagatacctatatatacattacccgtctcttac 206  Q
    |||| |||  ||| ||||||||||||   ||| ||||||  ||| | ||||| ||||| ||||||| | | ||| ||||||  ||||||||||| | |||    
T  12980338 ataacatggcatatcaacataaaatattttttttgcatttgggacgggtttgggtatgggttcggggtgggtacttatatacccattacccgtcccatac 12980437  T
Q  207 tcgtgttttgaaatcggg 224  Q
     |||||||||||||||||    
T  12980438 ccgtgttttgaaatcggg 12980455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 8 - 224
Target Start/End: Complemental strand, 18826103 - 18825887
Alignment:
Q  8 tccaagaatatattcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagtttttataacacggtaattatcaaacaaa 107  Q
    ||||| |||||  ||||||||||||||||||||||||||||||||||||||| |||| ||||||||| ||||||||||||||||  ||||||||||||||    
T  18826103 tccaataatatgctcactttaacatttgttagaccgattgatttagttgttcttttatatatcaatggtagtttttataacacgacaattatcaaacaaa 18826004  T
Q  108 ataatatgatataccaacataaaataaatttctgcattcaggatgagtttgagtatgagttcgggttagatacctatatatacattacccgtctcttact 207  Q
    |||| |||  ||| |||| |||||||| |||||| |||  ||||| ||||| ||| | ||||||| | | ||||||||||  | ||||||||| | |||     
T  18826003 ataacatggcatatcaacgtaaaataattttctgtatttgggatgggtttgggtacgggttcggggtgggtacctatatacccgttacccgtcccatacc 18825904  T
Q  208 cgtgttttgaaatcggg 224  Q
    |||||||||||||||||    
T  18825903 cgtgttttgaaatcggg 18825887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 6 - 224
Target Start/End: Original strand, 5376945 - 5377163
Alignment:
Q  6 tgtccaagaatatattcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagtttttataacacggtaattatcaaaca 105  Q
    ||||||| |||||  ||| |||||||||||||| ||||||||||||||||| |||||||||||||| || ||||||||||||||||  ||||||||||||    
T  5376945 tgtccaacaatatgctcattttaacatttgttaaaccgattgatttagttgctcctttaaatatcattggtagtttttataacacgacaattatcaaaca 5377044  T
Q  106 aaataatatgatataccaacataaaataaatttctgcattcaggatgagtttgagtatgagttcgggttagatacctatatatacattacccgtctctta 205  Q
    |||| | |||||||| ||||||||| ||| ||||||||||| |||    |||| ||||| ||||||| | | ||||||||||  | ||||||||| | ||    
T  5377045 aaattacatgatatatcaacataaagtaattttctgcattcgggacagatttgggtatgggttcggggtgggtacctatataccctttacccgtcccata 5377144  T
Q  206 ctcgtgttttgaaatcggg 224  Q
    |  ||||||||||||||||    
T  5377145 cctgtgttttgaaatcggg 5377163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 25 - 224
Target Start/End: Original strand, 3920417 - 3920616
Alignment:
Q  25 tttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagtttttataacacggtaattatcaaacaaaataatatgatataccaa 124  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||| || |||||||||||||||||| |||  ||| |||    
T  3920417 tttaacatttgttagaccgattcatttagttgttcctttaaatatcaatggtagtttttataacatggcaattatcaaacaaaataacatggcatatcaa 3920516  T
Q  125 cataaaataaatttctgcattcaggatgagtttgagtatgagttcgggttagatacctatatatacattacccgtctcttactcgtgttttgaaatcggg 224  Q
    |||||||||| ||||| ||||| |||    |||| ||||| ||||||| | | ||||||||||    ||| ||||| | |||  ||||||||||||||||    
T  3920517 cataaaataattttctacattcgggacagttttgggtatgggttcggggtgggtacctatatacctgttatccgtcccataccagtgttttgaaatcggg 3920616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 25 - 224
Target Start/End: Complemental strand, 27850540 - 27850341
Alignment:
Q  25 tttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagtttttataacacggtaattatcaaacaaaataatatgatataccaa 124  Q
    |||||||||||||||| ||||||||||||||| |||||||||||||||||  |||||||||||||||  |||||||||||||||||| |||| ||| ||     
T  27850540 tttaacatttgttagatcgattgatttagttgctcctttaaatatcaatgaaagtttttataacacgacaattatcaaacaaaataacatgacatatcat 27850441  T
Q  125 cataaaataaatttctgcattcaggatgagtttgagtatgagttcgggttagatacctatatatacattacccgtctcttactcgtgttttgaaatcggg 224  Q
    | |||| ||| ||||| ||||| ||| | ||||| ||||| ||||||| | | |||||||| |  | ||||||||| | ||| |||||||||||||||||    
T  27850440 cgtaaagtaattttctacattcgggacgggtttgggtatgggttcgggatgggtacctatacacccgttacccgtcccatacccgtgttttgaaatcggg 27850341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 21 - 215
Target Start/End: Complemental strand, 25783125 - 25782931
Alignment:
Q  21 tcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagtttttataacacggtaattatcaaacaaaataatatgatata 120  Q
    ||||||||| |||| ||| ||||||||||||||||| ||||||||||||  ||| ||||||||||||||| | ||||||||||||||||||||||| |||    
T  25783125 tcactttaatatttattataccgattgatttagttgctcctttaaatattgatgatagtttttataacactgcaattatcaaacaaaataatatgagata 25783026  T
Q  121 ccaacataaaataaatttctgcattcaggatgagtttgagtatgagttcgggttagatacctatatatacattacccgtctcttactcgtgtttt 215  Q
      |||||||| ||| ||||||||||| ||| |  |||  ||||||||||||| | | ||||||||||  ||||| ||||||| ||| ||||||||    
T  25783025 ttaacataaagtaattttctgcattcgggacggattttggtatgagttcggggtgggtacctatatacccattatccgtctcatacccgtgtttt 25782931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 21 - 171
Target Start/End: Complemental strand, 46127398 - 46127251
Alignment:
Q  21 tcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagtttttataacacggtaattatcaaacaaaataatatgatata 120  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||  ||| |||||||||||||| |||| ||     
T  46127398 tcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatggtagttattataacacgacaatgatcaaacaaaataacatgacat- 46127300  T
Q  121 ccaacataaaataaatttctgcattcaggatgagtttgagtatgagttcgg 171  Q
      | |||||||||| ||||||||||  ||| | ||||||||||||| ||||    
T  46127299 --atcataaaataattttctgcatttgggacgggtttgagtatgagatcgg 46127251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 8 - 223
Target Start/End: Original strand, 16078875 - 16079090
Alignment:
Q  8 tccaagaatatattcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagtttttataacacggtaattatcaaacaaa 107  Q
    ||||| ||||| ||||||||||||||| ||||||||||||||||||||  ||||||||||||||| | ||||||||||||||||  ||||||||||||||    
T  16078875 tccaacaatatgttcactttaacattttttagaccgattgatttagtttctcctttaaatatcaagggtagtttttataacacgacaattatcaaacaaa 16078974  T
Q  108 ataatatgatataccaacataaaataaatttctgcattcaggatgagtttgagtatgagttcgggttagatacctatatatacattacccgtctcttact 207  Q
    |||| |||  ||| |||| |||| ||| |||||| ||||| || ||||||| ||||  ||| ||| | |  |||||||||  | ||||||||| | |||     
T  16078975 ataacatggcatatcaacgtaaagtaattttctgtattcatgacgagtttgggtataggtttggggtgggcacctatatacccgttacccgtcccatacc 16079074  T
Q  208 cgtgttttgaaatcgg 223  Q
    |||||||||| |||||    
T  16079075 cgtgttttgagatcgg 16079090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 8 - 130
Target Start/End: Complemental strand, 2630805 - 2630683
Alignment:
Q  8 tccaagaatatattcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagtttttataacacggtaattatcaaacaaa 107  Q
    ||||| ||||| |||||||||||||||| |||||||||||||||||||| || |||||||||||||| |||||||||||| |||| ||||||||||||||    
T  2630805 tccaacaatatgttcactttaacatttgatagaccgattgatttagttgctcatttaaatatcaatggtagtttttataatacggcaattatcaaacaaa 2630706  T
Q  108 ataatatgatataccaacataaa 130  Q
    |||| |||  ||| |||||||||    
T  2630705 ataacatggcatatcaacataaa 2630683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 29 - 275
Target Start/End: Original strand, 26622834 - 26623086
Alignment:
Q  29 acatttgttagaccgattgatttagttgttcctttaaatatcaatgttagtttttataacacggtaattatcaaacaaaataatatgatataccaacata 128  Q
    ||||||||| |||| ||||||||| ||| ||||||||||||||||| |||||||||||||||   |||||||||||||||||| |||  ||| |||||||    
T  26622834 acatttgtttgaccaattgatttaattgctcctttaaatatcaatggtagtttttataacacaacaattatcaaacaaaataacatggcatatcaacata 26622933  T
Q  129 aaataaatttctgcattcaggatgagtttgagtatgagttcgggttagatacctatatatacattacccgtctcttactcgtgttttgaaatcggg---- 224  Q
    |||||| ||| |||||||   | ||||||| ||||| ||||||| | | ||| ||||||  |||||||| || | ||| |||||||||||||| ||        
T  26622934 aaataattttttgcattcgaaacgagtttgggtatgggttcggggtgggtacttatatacccattacccatcccatacccgtgttttgaaatcagggaaa 26623033  T
Q  225 --ccaaactcaatcaaaatggagaaaatccgtcaaattaaatttgattcggac 275  Q
      |||||| || |||||| || ||||||||| |||| | |||||| |||||||    
T  26623034 acccaaacccactcaaaacggggaaaatccgacaaaatgaatttggttcggac 26623086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 21 - 224
Target Start/End: Original strand, 7779882 - 7780086
Alignment:
Q  21 tcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagttttta-taacacggtaattatcaaacaaaataatatgatat 119  Q
    ||||||| |||||||||||||  | ||||||||||| ||||||||||||||||| ||||||||| ||||| |  |||||||||||||||||| || | ||    
T  7779882 tcactttcacatttgttagacaaaatgatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataacataacat 7779981  T
Q  120 accaacataaaataaatttctgcattcaggatgagtttgagtatgagttcgggttagatacctatatatacattacccgtctcttactcgtgttttgaaa 219  Q
    | ||||||||||||||||| | ||||  ||| | ||||| ||||  ||||||| | | ||||||||||  ||||| ||||| | ||| |||||||||| |    
T  7779982 atcaacataaaataaatttttacatttgggacgggtttgggtataggttcggggtgggtacctatatacccattatccgtcccatacccgtgttttgaga 7780081  T
Q  220 tcggg 224  Q
    |||||    
T  7780082 tcggg 7780086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 22 - 224
Target Start/End: Complemental strand, 25980135 - 25979932
Alignment:
Q  22 cactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagttttta-taacacggtaattatcaaacaaaataatatgatata 120  Q
    |||||||||||||||||||| || ||||||| ||  |||||||||||||||||| |||||||| ||||| | ||||||||||||||||||| |||| ||     
T  25980135 cactttaacatttgttagacggaatgatttatttaatcctttaaatatcaatgtaagtttttattaacatgataattatcaaacaaaataacatgacatt 25980036  T
Q  121 ccaacataaaataaatttctgcattcaggatgagtttgagtatgagttcgggttagatacctatatatacattacccgtctcttactcgtgttttgaaat 220  Q
     ||||||||||||| ||| | ||||  | | |  |||| ||||||||| ||| | | ||| ||||||| | ||||||||||| |||  ||||||||||||    
T  25980035 tcaacataaaataattttttacatttggaaaggatttgggtatgagtttggggtgggtacatatatatccgttacccgtctcatacctgtgttttgaaat 25979936  T
Q  221 cggg 224  Q
    ||||    
T  25979935 cggg 25979932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 21 - 220
Target Start/End: Complemental strand, 38140012 - 38139811
Alignment:
Q  21 tcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagttttta-taacacggtaattatcaaacaaaataatatgatat 119  Q
    ||||||||||||||||||||| || ||||||||||| ||||||||||||||||| ||||||||| ||||| |  |||||||||||||||||| |||| ||    
T  38140012 tcactttaacatttgttagacggaatgatttagttgatcctttaaatatcaatgatagtttttattaacatgacaattatcaaacaaaataacatgacat 38139913  T
Q  120 accaacataaaataa-atttctgcattcaggatgagtttgagtatgagttcgggttagatacctatatatacattacccgtctcttactcgtgttttgaa 218  Q
    | ||| |||||||||  ||| | ||||   || | |||||  |||| ||||||| | | ||| ||||||  ||||||||||| | |||||||||||||||    
T  38139912 atcaatataaaataatttttttacatttgagacgggtttggttatgggttcggggtgggtacttatatactcattacccgtcccatactcgtgttttgaa 38139813  T
Q  219 at 220  Q
    ||    
T  38139812 at 38139811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 21 - 145
Target Start/End: Original strand, 24425256 - 24425379
Alignment:
Q  21 tcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagtttttataacacggtaattatcaaacaaaataatatgatata 120  Q
    ||||||||||||||||||||||| |||||||| |||| |||||||||||||||| |||||||||||||||| ||||||||||||| ||||| |||  |||    
T  24425256 tcactttaacatttgttagaccggttgatttatttgt-cctttaaatatcaatggtagtttttataacacgataattatcaaacagaataacatggcata 24425354  T
Q  121 ccaacataaaataaatttctgcatt 145  Q
     ||||||| | ||| ||| ||||||    
T  24425355 tcaacatatagtaattttatgcatt 24425379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 8 - 223
Target Start/End: Original strand, 37182136 - 37182351
Alignment:
Q  8 tccaagaatatattcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagttttta-taacacggtaattatcaaacaa 106  Q
    ||||| ||||| ||||||||||||||||||||||  | ||||||||||| ||||||||||||||||| ||||||||| ||||| |  |||||||||||||    
T  37182136 tccaacaatatgttcactttaacatttgttagacacaatgatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaa 37182235  T
Q  107 aataatatgatataccaacataaaataaatttctgcattcaggatgagtttgagtatgagttcgggttagatacctatatatacattacccgtctcttac 206  Q
    ||||| |||| ||| |||||||| |||| ||| | ||||  ||| | || || ||||| |||||| | || ||||||||||  |  |||||||| | |||    
T  37182236 aataacatgacatatcaacataagataattttttacatttgggacgggtatgggtatgggttcggatgag-tacctatatacccgctacccgtcccatac 37182334  T
Q  207 tcgtgttttgaaatcgg 223  Q
     ||||||||||| ||||    
T  37182335 ccgtgttttgaattcgg 37182351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 21 - 145
Target Start/End: Original strand, 37579137 - 37579261
Alignment:
Q  21 tcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagtttttataacacggtaattatcaaacaaaataatatgatata 120  Q
    ||||||||||||||||||||  |||||||||||||| || |||||||||||||| || ||||||||||| |  |||||||||||||||||| |||  |||    
T  37579137 tcactttaacatttgttagatggattgatttagttgctcatttaaatatcaatgataatttttataacatgacaattatcaaacaaaataacatggcata 37579236  T
Q  121 ccaacataaaataaatttctgcatt 145  Q
     ||||||||| ||| ||||||||||    
T  37579237 gcaacataaagtaattttctgcatt 37579261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 21 - 217
Target Start/End: Original strand, 30650505 - 30650702
Alignment:
Q  21 tcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagttttta-taacacggtaattatcaaacaaaataatatgatat 119  Q
    ||||||| |||||||||||||  | ||||||||||| ||||||||||||||||| ||||||||| ||||| || |||||||||||||||||| || | ||    
T  30650505 tcactttcacatttgttagacaaaatgatttagttgatcctttaaatatcaatggtagtttttattaacatggcaattatcaaacaaaataacataacat 30650604  T
Q  120 accaacataaaataaatttctgcattcaggatgagtttgagtatgagttcgggttagatacctatatatacattacccgtctcttactcgtgttttga 217  Q
    | ||||||||| ||| ||| | ||||  ||| |  |||| ||||| ||||||| | | ||||||||||  | ||||||||| | ||| ||||||||||    
T  30650605 atcaacataaagtaattttttacatttgggacggatttgggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgttttga 30650702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 21 - 224
Target Start/End: Original strand, 45379980 - 45380185
Alignment:
Q  21 tcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagttttta-taacacggtaattatcaaacaaaataatatgatat 119  Q
    |||||||||||||||||||||  | ||||||||||| ||||||||||||||||| ||||||||| ||||| |  |||||||||||||||||| |||| ||    
T  45379980 tcactttaacatttgttagacgaactgatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataacatgacat 45380079  T
Q  120 accaacataaaataa-atttctgcattcaggatgagtttgagtatgagttcgggttagatacctatatatacattacccgtctcttactcgtgttttgaa 218  Q
      ||||||||| |||  ||| | ||||  ||| ||||||  ||||| ||||||| | | ||||||||||  | ||||||||| | ||| ||| |||||||    
T  45380080 gtcaacataaagtaatttttttacatttgggacgagtttaggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtattttgaa 45380179  T
Q  219 atcggg 224  Q
    ||||||    
T  45380180 atcggg 45380185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 8 - 111
Target Start/End: Complemental strand, 44986130 - 44986026
Alignment:
Q  8 tccaagaatatattcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagttttta-taacacggtaattatcaaacaa 106  Q
    ||||| ||||| |||||||||||||||||||||| || ||||||||||| ||||||||||||||||| ||||||||| ||||| |  |||||||||||||    
T  44986130 tccaacaatatgttcactttaacatttgttagacggaatgatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaa 44986031  T
Q  107 aataa 111  Q
    |||||    
T  44986030 aataa 44986026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 21 - 163
Target Start/End: Original strand, 23328484 - 23328627
Alignment:
Q  21 tcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagtttttataacacggtaattatcaaacaaaataatatgatata 120  Q
    |||||||| ||||| |||||||||||||||||||| |||||||||||||||||| || |||||||| ||||  |||||||||||||||||| | || ||     
T  23328484 tcactttagcatttattagaccgattgatttagttattcctttaaatatcaatgataatttttatagcacgacaattatcaaacaaaataacaagacatg 23328583  T
Q  121 ccaacat-aaaataaatttctgcattcaggatgagtttgagtat 163  Q
     |||||| ||||||| ||||| ||||| ||| | ||||| ||||    
T  23328584 tcaacataaaaataattttctccattcgggacgggtttgggtat 23328627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 36 - 146
Target Start/End: Complemental strand, 26004675 - 26004565
Alignment:
Q  36 ttagaccgattgatttagttgttcctttaaatatcaatgttagtttttataacacggtaattatcaaacaaaataatatgatataccaacataaaataaa 135  Q
    ||||||||||||||||||| | ||||||||||||||||| |||||||||||| | |  |||||||||||||||||| |||  ||| ||||||||| |||     
T  26004675 ttagaccgattgatttagtcgctcctttaaatatcaatgatagtttttataagaagacaattatcaaacaaaataacatggcatatcaacataaagtaat 26004576  T
Q  136 tttctgcattc 146  Q
    |||||||||||    
T  26004575 tttctgcattc 26004565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 14 - 111
Target Start/End: Complemental strand, 5916291 - 5916194
Alignment:
Q  14 aatatattcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagtttttataacacggtaattatcaaacaaaataa 111  Q
    |||||| ||| |||||||||||||||||||||||||| | ||  ||||||||||||||||| ||||||| ||||||| | ||||||||||||||||||    
T  5916291 aatatactcagtttaacatttgttagaccgattgattgatttactcctttaaatatcaatggtagttttgataacacagcaattatcaaacaaaataa 5916194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 8 - 224
Target Start/End: Original strand, 17885326 - 17885543
Alignment:
Q  8 tccaagaatatattcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagttttta-taacacggtaattatcaaacaa 106  Q
    ||||| ||||| |||||||||||||||| ||||  || ||||||||||| ||||||||||||||||| ||||||||| | ||| |  |||||||||||||    
T  17885326 tccaacaatatgttcactttaacatttgatagatggaatgatttagttgatcctttaaatatcaatggtagtttttattgacatgacaattatcaaacaa 17885425  T
Q  107 aataatatgatataccaacataaaataaatttctgcattcaggatgagtttgagtatgagttcgggttagatacctatatatacattacccgtctcttac 206  Q
    ||||| |||| ||| ||||||||| ||| ||| | ||||  ||| | || || ||||| ||||||| | |  |||||||||  | ||||||||| | |||    
T  17885426 aataacatgacatatcaacataaagtaattttttacatttgggacgggtatgggtatgggttcggggttggaacctatatacccgttacccgtcccatac 17885525  T
Q  207 tcgtgttttgaaatcggg 224  Q
     | |||||| ||||||||    
T  17885526 ccatgttttaaaatcggg 17885543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 21 - 224
Target Start/End: Original strand, 16866043 - 16866247
Alignment:
Q  21 tcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagttttta-taacacggtaattatcaaacaaaataatatgatat 119  Q
    ||||||| |||||||||||||  | ||||||||||  || |||||||||||||| ||||||||| ||||| || |||||||||||||||||| || | ||    
T  16866043 tcactttcacatttgttagacaaaatgatttagttaatcatttaaatatcaatgatagtttttattaacatggcaattatcaaacaaaataacataacat 16866142  T
Q  120 accaacataaaataaatttctgcattcaggatgagtttgagtatgagttcgggttagatacctatatatacattacccgtctcttactcgtgttttgaaa 219  Q
    | ||||||||| ||| ||| | ||||  ||| | ||||| ||||| ||||||| | | ||||||||||  | |||| |||| | ||| |||||||||| |    
T  16866143 atcaacataaagtaattttttacatttgggacgggtttgggtatgggttcggggtgggtacctatatacccgttactcgtcccatacccgtgttttgaga 16866242  T
Q  220 tcggg 224  Q
    |||||    
T  16866243 tcggg 16866247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 21 - 213
Target Start/End: Original strand, 17851728 - 17851921
Alignment:
Q  21 tcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagttttta-taacacggtaattatcaaacaaaataatatgatat 119  Q
    ||||||| |||||| |||||   | ||||||||||| ||||||||||||||||| ||||||||| ||||| |  |||||||||||||||||| || | ||    
T  17851728 tcactttcacatttattagataaaatgatttagttgatcctttaaatatcaatgatagtttttattaacatgacaattatcaaacaaaataacataacat 17851827  T
Q  120 accaacataaaataaatttctgcattcaggatgagtttgagtatgagttcgggttagatacctatatatacattacccgtctcttactcgtgtt 213  Q
    | ||||||||| ||  ||| | ||||  ||||| ||||| ||||| ||||||| | | ||||||||||| | ||||||||| | ||| ||||||    
T  17851828 atcaacataaagtagttttttacatttgggatgggtttgggtatgggttcgggatgggtacctatatatccgttacccgtcccatacccgtgtt 17851921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 8 - 224
Target Start/End: Complemental strand, 41741681 - 41741465
Alignment:
Q  8 tccaagaatatattcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagttttta-taacacggtaattatcaaacaa 106  Q
    ||||| |||||  |||||||||||||||||||||  | ||||||| ||| ||| ||||||||||||| ||||||||| ||||| | ||||||||||||||    
T  41741681 tccaacaatatgctcactttaacatttgttagacgtaatgatttaattgatccgttaaatatcaatggtagtttttattaacatgataattatcaaacaa 41741582  T
Q  107 aataatatgatataccaacataaaataaatttctgcattcaggatgagtttgagtatgagttcgggttagatacctatatatacattacccgtctcttac 206  Q
    ||||| |||| ||| ||  ||||| ||| ||| | ||||  ||| | || ||| |||| ||||||| | | |||||| |||  | ||| ||||||| |||    
T  41741581 aataacatgacatatcagtataaagtaattttttacatttgggacgggtatgaatatgggttcggg-tgggtacctacatacccgttatccgtctcatac 41741483  T
Q  207 tcgtgttttgaaatcggg 224  Q
     |||||||||||||||||    
T  41741482 ccgtgttttgaaatcggg 41741465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 21 - 233
Target Start/End: Complemental strand, 45885984 - 45885771
Alignment:
Q  21 tcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagttttta-taacacggtaattatcaaacaaaataatatgatat 119  Q
    ||||||| |||||||||||||  | ||||| ||||| ||||||||||||||||| ||||||||| ||||| || |||||||||||||||||| || | ||    
T  45885984 tcactttcacatttgttagacaaaatgattaagttgatcctttaaatatcaatgatagtttttattaacatggcaattatcaaacaaaataacataacat 45885885  T
Q  120 accaacataaaataaatttctgcattcaggatgagtttgagtatgagttcgggttagatacctatatatacattacccgtctcttactcgtgttttgaaa 219  Q
    | ||||||||| ||| ||| | ||||  ||| |  |||  ||||| ||||||| | | ||||||||||    ||||||||| | ||| |||||||||| |    
T  45885884 atcaacataaagtaattttttacatttgggacggattttggtatgggttcggggtgggtacctatatacttgttacccgtcccatacccgtgttttgaga 45885785  T
Q  220 tcgggccaaactca 233  Q
    |||||  |||||||    
T  45885784 tcggggaaaactca 45885771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 52 - 260
Target Start/End: Original strand, 16811635 - 16811849
Alignment:
Q  52 agttgttcctttaaatatcaatgttagtttttat-aacacggtaattatcaaacaaaataatatgatataccaacataaaataaatttctgcattcagga 150  Q
    ||||| || |||||||||||||| |||||||||| |||| || |||||||||||||||||| || ||||| ||||||||| ||| ||| | ||||  |||    
T  16811635 agttgatcttttaaatatcaatggtagtttttattaacatggcaattatcaaacaaaataacataatatatcaacataaagtaattttttacatttggga 16811734  T
Q  151 tgagtttgagtatgagttcgggttagatacctatatatacattacccgtctcttactcgtgttttgaaatcggg------ccaaactcaatcaaaatgga 244  Q
     |  |||| ||||| ||||||| | | || |||||||  ||||| ||||||| ||| |||||||||| ||||||      ||||||||| ||||||||||    
T  16811735 cggctttgggtatgggttcggg-tgggtatctatatacccattatccgtctcatacccgtgttttgagatcggggaaaatccaaactcagtcaaaatgga 16811833  T
Q  245 gaaaatccgtcaaatt 260  Q
    ||||| | ||||||||    
T  16811834 gaaaacctgtcaaatt 16811849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 22 - 224
Target Start/End: Original strand, 41103528 - 41103734
Alignment:
Q  22 cactttaacatttgttagaccgattgatttagttgttcctttaaat---atcaatgttagttttta-taacacggtaattatcaaacaaaataatatgat 117  Q
    |||||||||||||||||||| || ||||||||||| ||||||||||   ||||||| || ||| || ||||| |  |||||||||||||||||| | ||     
T  41103528 cactttaacatttgttagacggaatgatttagttgatcctttaaatatcatcaatggtaatttgtattaacatgacaattatcaaacaaaataacaagag 41103627  T
Q  118 ataccaacataaaataaatttctgcattcaggatgagtttgagtatgagttcgggttagatacctatatatacattacccgtctcttactcgtgttttga 217  Q
    ||| ||||||||||||| ||| | |||| |||| | ||||  ||||| ||||||| | | ||| ||||||  | ||| ||||| | ||| ||||||||||    
T  41103628 atatcaacataaaataattttttacatttaggacgggtttatgtatgggttcggggtgggtacttatatacccgttaaccgtcccatacccgtgttttga 41103727  T
Q  218 aatcggg 224  Q
    |||||||    
T  41103728 aatcggg 41103734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 21 - 134
Target Start/End: Original strand, 39316869 - 39316983
Alignment:
Q  21 tcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagttttta-taacacggtaattatcaaacaaaataatatgatat 119  Q
    |||||||||||||||||||||  | ||||||| | | ||||| ||||||||||| ||||||||| ||||| |  |||||||||||||||||| |||| ||    
T  39316869 tcactttaacatttgttagacgtaatgatttaatcgatccttcaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataacatgacat 39316968  T
Q  120 accaacataaaataa 134  Q
    | |||||||||||||    
T  39316969 atcaacataaaataa 39316983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 29 - 172
Target Start/End: Original strand, 25905510 - 25905655
Alignment:
Q  29 acatttgttagaccgattgatttagttgttcctttaaatatcaatgttagttttta-taacacggtaattatcaaacaaaataatatgatataccaacat 127  Q
    |||||||||||||  | | ||||||||| ||||||||||||||||| ||||||||| ||||| |  |||||||||||||||||| || | ||| ||||||    
T  25905510 acatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataacataacatatcaacat 25905609  T
Q  128 aaaataaatttctgcattcaggatga-gtttgagtatgagttcggg 172  Q
    ||||||| ||| | ||||  ||| || ||||| |||||||||||||    
T  25905610 aaaataattttttacatttgggacgatgtttgggtatgagttcggg 25905655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 8 - 85
Target Start/End: Complemental strand, 26004752 - 26004675
Alignment:
Q  8 tccaagaatatattcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagtttttat 85  Q
    ||||| |||||  ||| |||||||||||||||||||||||||||||| | ||||||||||||||||| ||||||||||    
T  26004752 tccaacaatatgctcattttaacatttgttagaccgattgatttagtcgctcctttaaatatcaatggtagtttttat 26004675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 21 - 224
Target Start/End: Original strand, 35074343 - 35074548
Alignment:
Q  21 tcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagttttta-taacacggtaattatcaaacaaaataatatgatat 119  Q
    ||||||| |||||||||||||  | | ||||||||| ||||||||||||||||| ||||||||| ||||| |  |||||||||||||||||| || | ||    
T  35074343 tcactttcacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataacataacat 35074442  T
Q  120 accaacataaaata-aatttctgcattcaggatgagtttgagtatgagttcgggttagatacctatatatacattacccgtctcttactcgtgttttgaa 218  Q
    | ||||||||| ||   ||| | ||||  ||| | ||||| ||||| ||||||||| | ||||||||||  | ||||||||| | ||| |||||||| |     
T  35074443 atcaacataaagtagtttttttacatttgggacgggtttgggtatgggttcgggttgggtacctatatacccgttacccgtcccatacccgtgttttaag 35074542  T
Q  219 atcggg 224  Q
    ||||||    
T  35074543 atcggg 35074548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 21 - 224
Target Start/End: Complemental strand, 18125447 - 18125243
Alignment:
Q  21 tcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagttttta-taacacggtaattatcaaacaaaataatatgatat 119  Q
    ||||||| |||||||||||||  | | ||||||||| | ||||||||||||||| ||||||||| ||||| |  |||||||||||||||||| || | ||    
T  18125447 tcactttcacatttgttagacaaaattatttagttgattctttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataacataacat 18125348  T
Q  120 accaacataaaataaatttctgcattcaggatgagtttgagtatgagttcgggttagatacctatatatacattacccgtctcttactcgtgttttgaaa 219  Q
    | ||||||||| ||  ||| | ||||  ||| | ||||| ||||| ||||||| | | ||||||||||  | ||||||||| | ||| ||||||| || |    
T  18125347 atcaacataaagtagttttttacatttgggacgggtttgggtatgcgttcggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgaga 18125248  T
Q  220 tcggg 224  Q
    |||||    
T  18125247 tcggg 18125243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 21 - 224
Target Start/End: Complemental strand, 39456232 - 39456030
Alignment:
Q  21 tcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagttttta-taacacggtaattatcaaacaaaataatatgatat 119  Q
    |||||||||||||||||||||  | ||||||| ||| |||||  |||||||||| || |||||| || || || |||||||||||||||||| |||| ||    
T  39456232 tcactttaacatttgttagacgtaatgatttaattgatccttccaatatcaatggtaatttttattaccatggcaattatcaaacaaaataacatgacat 39456133  T
Q  120 accaacataaaataaatttctgcattcaggatgagtttgagtatgagttcgggttagatacctatatatacattacccgtctcttactcgtgttttgaaa 219  Q
    | ||||||||| | ||||| | ||||  ||| | || |||||||| ||||||| | | ||||||||||  | ||||||||| | ||| | ||||||||||    
T  39456132 atcaacataaagt-aatttttacatttgggacgggtatgagtatg-gttcggggtgggtacctatatacccgttacccgtcccatacccatgttttgaaa 39456035  T
Q  220 tcggg 224  Q
    |||||    
T  39456034 tcggg 39456030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 21 - 216
Target Start/End: Complemental strand, 44794246 - 44794051
Alignment:
Q  21 tcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagttttta-taacacggtaattatcaaacaaaataatatgatat 119  Q
    ||||||| |||||||||||||  | ||||||||||| || ||||| |||||||| ||||||||| ||||| |  |||||||||||||||||| || | ||    
T  44794246 tcactttcacatttgttagacaaaatgatttagttgatcatttaagtatcaatggtagtttttagtaacatgacaattatcaaacaaaataacataacat 44794147  T
Q  120 accaacataaaataaatttctgcattcaggatgagtttgagtatgagttcgggttagatacctatatatacattacccgtctcttactcgtgttttg 216  Q
    | ||||||||||||| ||| | ||||  |||   ||||| ||||| ||||||| | | ||||| ||||  | ||||||||||| ||| |||||||||    
T  44794146 atcaacataaaataattttttacatttgggacaggtttgggtatgggttcggggtgggtacct-tatactcgttacccgtctcatacccgtgttttg 44794051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 24 - 222
Target Start/End: Complemental strand, 44734573 - 44734374
Alignment:
Q  24 ctttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagttttta-taacacggtaattatcaaacaaaataatatgatatacc 122  Q
    |||||| |||||||||||  | ||||||| ||| ||||| ||||||||||| ||||||||| ||||| |  |||||||||| ||||||| |||| ||| |    
T  44734573 ctttaatatttgttagacgtaatgatttaattgatccttcaaatatcaatgatagtttttattaacatgacaattatcaaataaaataacatgacatatc 44734474  T
Q  123 aacataaaataaatttctgcattcaggatgagtttgagtatgagttcgggttagatacctatatatacattacccgtctcttactcgtgttttgaaatcg 222  Q
    |||||||| ||| ||| | ||||  ||| |  | || ||||| ||||||| | | ||||||||||  ||||||| ||| | ||| |||||||||||||||    
T  44734473 aacataaagtaattttttacatttgggacggatatgtgtatgggttcggggtgggtacctatatacccattaccggtcccatacccgtgttttgaaatcg 44734374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 21 - 130
Target Start/End: Complemental strand, 37196217 - 37196107
Alignment:
Q  21 tcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagttttta-taacacggtaattatcaaacaaaataatatgatat 119  Q
    ||||||||||||||||||||| || ||||||||||| || |||| ||||||||| ||||||||| ||||| |  | |||||||||||||||| || | ||    
T  37196217 tcactttaacatttgttagacggaatgatttagttgatcttttatatatcaatggtagtttttattaacatgacagttatcaaacaaaataacataacat 37196118  T
Q  120 accaacataaa 130  Q
    | |||||||||    
T  37196117 atcaacataaa 37196107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 50 - 187
Target Start/End: Complemental strand, 44658639 - 44658501
Alignment:
Q  50 ttagttgttcctttaaatatcaatgttagtttttat-aacacggtaattatcaaacaaaataatatgatataccaacataaaataaatttctgcattcag 148  Q
    ||||||| ||||||||||||||||| |||||||||| |||| |  |||||||||||||||||| |||| ||| ||||||||||||  ||| | ||||  |    
T  44658639 ttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataacatgacatatcaacataaaatatttttttacatttgg 44658540  T
Q  149 gatgagtttgagtatgagttcgggttagatacctatata 187  Q
     | | ||||| ||||| ||||||| ||| ||||||||||    
T  44658539 tacgggtttgggtatgggttcgggataggtacctatata 44658501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 21 - 130
Target Start/End: Complemental strand, 45709081 - 45708971
Alignment:
Q  21 tcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagttttta-taacacggtaattatcaaacaaaataatatgatat 119  Q
    ||||||| |||||||||||||  | ||||||||||| ||||||||||||||||| || |||||| ||| | |  ||||||||||||||||||||| | ||    
T  45709081 tcactttcacatttgttagacaaaatgatttagttgatcctttaaatatcaatggtaatttttattaatatgacaattatcaaacaaaataatataacat 45708982  T
Q  120 accaacataaa 130  Q
    | |||||||||    
T  45708981 atcaacataaa 45708971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 8 - 85
Target Start/End: Complemental strand, 3227775 - 3227698
Alignment:
Q  8 tccaagaatatattcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagtttttat 85  Q
    ||||| |||||  |||||| |||||||||||||| || ||||||||||| ||||||||||||||||| ||||||||||    
T  3227775 tccaacaatatgctcacttcaacatttgttagacggaatgatttagttgatcctttaaatatcaatggtagtttttat 3227698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 21 - 224
Target Start/End: Original strand, 21702533 - 21702737
Alignment:
Q  21 tcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagttttta-taacacggtaattatcaaacaaaataatatgatat 119  Q
    ||||||| |||||||||||||  | | ||||||||| |||||||||||| |||| ||||||||| ||||| |  |||||||||||||||||| || | ||    
T  21702533 tcactttcacatttgttagacaaaattatttagttgatcctttaaatataaatggtagtttttattaacatgacaattatcaaacaaaataacataacat 21702632  T
Q  120 accaacataaaataaatttctgcattcaggatgagtttgagtatgagttcgggttagatacctatatatacattacccgtctcttactcgtgttttgaaa 219  Q
    | ||||||||| ||  ||| | ||||  ||| | ||| | ||||| ||||||| | | ||||||||||  | ||||||||| | ||| ||||||| || |    
T  21702633 atcaacataaagtagttttttacatttgggacgggttggggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgaga 21702732  T
Q  220 tcggg 224  Q
    |||||    
T  21702733 tcggg 21702737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 8 - 111
Target Start/End: Original strand, 43507294 - 43507398
Alignment:
Q  8 tccaagaatatattcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagttttta-taacacggtaattatcaaacaa 106  Q
    ||||| |||||  ||||||||| ||||||||||| || ||||||||||| || |||||||||||||| ||||||||| ||| | |  |||||||||||||    
T  43507294 tccaacaatatgctcactttaaaatttgttagacggaatgatttagttgatcttttaaatatcaatggtagtttttattaatatgacaattatcaaacaa 43507393  T
Q  107 aataa 111  Q
    |||||    
T  43507394 aataa 43507398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 94 - 224
Target Start/End: Complemental strand, 3227091 - 3226961
Alignment:
Q  94 aattatcaaacaaaataatatgatataccaacataaaataaatttctgcattcaggatgagtttgagtatgagttcgggttagatacctatatatacatt 193  Q
    |||||||||||||||||| |||| ||| ||||||||||||| ||| | ||||  ||||| || |||||||| ||||||| | | |||||||||     ||    
T  3227091 aattatcaaacaaaataacatgacatatcaacataaaataattttttacatttgggatgtgtatgagtatgggttcggggtgggtacctatattcctgtt 3226992  T
Q  194 acccgtctcttactcgtgttttgaaatcggg 224  Q
    ||||||| | ||| |||||||||||||||||    
T  3226991 acccgtcccatacccgtgttttgaaatcggg 3226961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 21 - 134
Target Start/End: Original strand, 24753050 - 24753163
Alignment:
Q  21 tcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagtttttat-aacacggtaattatcaaacaaaataatatgatat 119  Q
    ||||||| |||||||||||||  | | ||||||||| || |||||||||||||| |||||||||| |||| |  |||||||||||||||||| || | ||    
T  24753050 tcactttcacatttgttagacaaaataatttagttgatc-tttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataacataacat 24753148  T
Q  120 accaacataaaataa 134  Q
    | |||||||||||||    
T  24753149 atcaacataaaataa 24753163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 21 - 79
Target Start/End: Original strand, 38152776 - 38152834
Alignment:
Q  21 tcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagt 79  Q
    ||||||||||||||||||||| || ||||||||||| ||||||| ||||||||| ||||    
T  38152776 tcactttaacatttgttagacggaatgatttagttgatcctttagatatcaatggtagt 38152834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 21 - 83
Target Start/End: Original strand, 10072363 - 10072425
Alignment:
Q  21 tcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagttttt 83  Q
    ||||||||||||||||||| | || ||||||||||| || ||||| |||||||| ||||||||    
T  10072363 tcactttaacatttgttaggcggaatgatttagttgatcatttaattatcaatggtagttttt 10072425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 225 - 311
Target Start/End: Original strand, 24753260 - 24753346
Alignment:
Q  225 ccaaactcaatcaaaatggagaaaatccgtcaaattaaatttgattcggacgtataaccaaatgtataggttttgctgccgtgccta 311  Q
    |||||| || |||||| ||||||||||||||||||| |||||| ||||||||  ||||||   |||| ||||||| |||| ||||||    
T  24753260 ccaaacccagtcaaaacggagaaaatccgtcaaattgaatttggttcggacgggtaaccacgggtatgggttttgttgccatgccta 24753346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 225 - 274
Target Start/End: Complemental strand, 44985914 - 44985865
Alignment:
Q  225 ccaaactcaatcaaaatggagaaaatccgtcaaattaaatttgattcgga 274  Q
    |||||| ||||||||| |||||||||||||||||||| ||||| ||||||    
T  44985914 ccaaacccaatcaaaacggagaaaatccgtcaaattagatttggttcgga 44985865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 92 - 224
Target Start/End: Original strand, 38152833 - 38152965
Alignment:
Q  92 gtaattatcaaacaaaataatatgatataccaacataaaataaatttctgcattcaggatgagtttgagtatgagttcgggttagatacctatatataca 191  Q
    |||||||||||||||||||| |||| ||| ||||||||||||| ||| | ||||  ||| | ||||  ||||| ||||||| | | ||||||||||  |     
T  38152833 gtaattatcaaacaaaataacatgacatatcaacataaaataattttttacatttgggacgggtttaggtatgggttcggggtgggtacctatatagccg 38152932  T
Q  192 ttacccgtctcttactcgtgttttgaaatcggg 224  Q
    ||| ||||  | ||| | |||||||||||||||    
T  38152933 ttatccgttccatacccatgttttgaaatcggg 38152965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 94; Significance: 1e-45; HSPs: 39)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 8 - 224
Target Start/End: Complemental strand, 45866417 - 45866200
Alignment:
Q  8 tccaagaatatattcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagttttta-taacacggtaattatcaaacaa 106  Q
    ||||| ||||| |||||||||||||||||||||| || ||||||||||| ||||||||||||||||| ||||||||| ||||| | ||||||||||||||    
T  45866417 tccaacaatatgttcactttaacatttgttagacagaatgatttagttgatcctttaaatatcaatggtagtttttattaacatgataattatcaaacaa 45866318  T
Q  107 aataatatgatataccaacataaaataaatttctgcattcaggatgagtttgagtatgagttcgggttagatacctatatatacattacccgtctcttac 206  Q
    ||||| |||| ||| ||||||||| ||| ||| | ||||  ||||| || || ||||||||| ||| | | ||||||||||  ||||||| ||||| |||    
T  45866317 aataacatgacatatcaacataaagtaattttttacatttgggatgggtatgggtatgagtttggggtgggtacctatatactcattacctgtctcatac 45866218  T
Q  207 tcgtgttttgaaatcggg 224  Q
     |||||||||||||||||    
T  45866217 ccgtgttttgaaatcggg 45866200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 21 - 274
Target Start/End: Complemental strand, 16433379 - 16433126
Alignment:
Q  21 tcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagtttttataacacggtaattatcaaacaaaataatatgatata 120  Q
    ||||||||| |||||||||||| ||||||||||||| ||||||||||||||||| |||||||||||| ||   |||||||||||||||||| |||| |||    
T  16433379 tcactttaatatttgttagaccaattgatttagttgctcctttaaatatcaatggtagtttttataatac---aattatcaaacaaaataacatgacata 16433283  T
Q  121 ccaacataaaataaatttctgcattcaggatgagtttgagtatgagttcgggttagatacctatatatacattacccgtctcttactcgtgttttgaaat 220  Q
     ||||||||| ||| ||||||||||  || || ||||| ||||| |||||||   | ||||||||||| | ||||||||| | ||| |||||||||||||    
T  16433282 tcaacataaagtaattttctgcatttggggtgggtttgggtatgggttcggg---ggtacctatatatccgttacccgtcccatacccgtgttttgaaat 16433186  T
Q  221 cgg------gccaaactcaatcaaaatggagaaaatccgtcaaattaaatttgattcgga 274  Q
    |||        ||||| |||||||||||| |||||||||||||||| | |||| ||||||    
T  16433185 cggagaaaactcaaacccaatcaaaatggggaaaatccgtcaaattgagtttggttcgga 16433126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 21 - 220
Target Start/End: Complemental strand, 9983108 - 9982909
Alignment:
Q  21 tcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagtttttataacacggtaattatcaaacaaaataatatgatata 120  Q
    |||||||||||||||||||||||||| ||||||||| |||||| |||||||||| ||||||| |||||| |  |||||||||||||||||| ||||||||    
T  9983108 tcactttaacatttgttagaccgattaatttagttgctcctttgaatatcaatggtagttttgataacatgagaattatcaaacaaaataacatgatata 9983009  T
Q  121 ccaacataaaataaatttctgcattcaggatgagtttgagtatgagttcgggttagatacctatatatacattacccgtctcttactcgtgttttgaaat 220  Q
      |||||||| ||| ||||||||||| ||||| ||||| ||||| ||||||| | | ||||||||||  | |||||| || | | | |||||||||||||    
T  9983008 ttaacataaagtaattttctgcattcgggatgggtttgggtatgggttcggggtgggtacctatatactcgttacccatcccattcccgtgttttgaaat 9982909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 25 - 187
Target Start/End: Complemental strand, 29871499 - 29871337
Alignment:
Q  25 tttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagtttttataacacggtaattatcaaacaaaataatatgatataccaa 124  Q
    ||||| ||||||||||||||||||| |||||| ||||||||||||||||| |||||||||||||| || |||||||||||||||||| |||| ||| |||    
T  29871499 tttaatatttgttagaccgattgatgtagttgctcctttaaatatcaatggtagtttttataacatgggaattatcaaacaaaataacatgacatatcaa 29871400  T
Q  125 cataaaataaatttctgcattcaggatgagtttgagtatgagttcgggttagatacctatata 187  Q
    |||||||||| ||||| ||||| ||| | ||||| |||||||||| || | | ||||||||||    
T  29871399 cataaaataattttctacattcgggacgggtttgggtatgagttcagggtgggtacctatata 29871337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 21 - 147
Target Start/End: Complemental strand, 35937035 - 35936909
Alignment:
Q  21 tcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagtttttataacacggtaattatcaaacaaaataatatgatata 120  Q
    |||||||||||||||||||||| ||||||||||||| ||||||||||||||||| |||||||| |||||||| |||||||||||||||||| |||| |||    
T  35937035 tcactttaacatttgttagaccaattgatttagttgctcctttaaatatcaatggtagtttttgtaacacggaaattatcaaacaaaataacatgacata 35936936  T
Q  121 ccaacataaaataaatttctgcattca 147  Q
     ||||||||| ||| ||||| ||||||    
T  35936935 tcaacataaagtaattttctacattca 35936909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 25 - 220
Target Start/End: Complemental strand, 34673496 - 34673301
Alignment:
Q  25 tttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagtttttataacacggtaattatcaaacaaaataatatgatataccaa 124  Q
    ||||||||||||||||||| |||||||||||| ||||||||||||||||| ||||||||||||||||| |||||||||||||||||| |||  ||| |||    
T  34673496 tttaacatttgttagaccggttgatttagttgctcctttaaatatcaatggtagtttttataacacggcaattatcaaacaaaataacatggcatatcaa 34673397  T
Q  125 cataaaataaatttctgcattcaggatgagtttgagtatgagttcgggttagatacctatatatacattacccgtctcttactcgtgttttgaaat 220  Q
    |||||| ||  ||||| | ||| | |   ||||| ||||| ||||||| | | ||||||||||  | ||||| ||||| ||| |||||||||||||    
T  34673396 cataaagtagttttcttcgttcggaacaggtttgggtatgggttcggggtgggtacctatatacccgttaccagtctcatacccgtgttttgaaat 34673301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 14 - 224
Target Start/End: Original strand, 17134810 - 17135021
Alignment:
Q  14 aatatattcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagttttta-taacacggtaattatcaaacaaaataat 112  Q
    ||||| ||||||||||||||||||||||  | ||||||||||| ||||||||||||||||| ||||||||| ||||| |  ||||||||||||||||||     
T  17134810 aatatgttcactttaacatttgttagacgaaatgatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataac 17134909  T
Q  113 atgatataccaacataaaataaatttctgcattcaggatgagtttgagtatgagttcgggttagatacctatatatacattacccgtctcttactcgtgt 212  Q
    |||| ||| ||||||||| ||| ||| | |||   ||| |||| || ||||| |||||||   | ||||||||||  | ||||||||||| ||| |||||    
T  17134910 atgacatatcaacataaagtaattttttacatatgggacgagtatgggtatgggttcggggatggtacctatatacccgttacccgtctcatacccgtgt 17135009  T
Q  213 tttgaaatcggg 224  Q
    ||||||||||||    
T  17135010 tttgaaatcggg 17135021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 8 - 186
Target Start/End: Complemental strand, 40087695 - 40087516
Alignment:
Q  8 tccaagaatatattcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagttttta-taacacggtaattatcaaacaa 106  Q
    ||||| |||||  ||||||||||||||||||||| || ||||||||||| ||||||||||||||||| ||||||||| ||||| |  |||||||||||||    
T  40087695 tccaacaatatgctcactttaacatttgttagacggaatgatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaa 40087596  T
Q  107 aataatatgatataccaacataaaataaatttctgcattcaggatgagtttgagtatgagttcgggttagatacctatat 186  Q
    ||||| |||||||| ||||||||| ||| ||| | ||||  ||| | || |||||||||||||||| | | |||||||||    
T  40087595 aataacatgatatatcaacataaagtaattttttacatttgggacgggtatgagtatgagttcggggtgggtacctatat 40087516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 8 - 187
Target Start/End: Complemental strand, 49741238 - 49741059
Alignment:
Q  8 tccaagaatatattcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagtttttataacacggtaattatcaaacaaa 107  Q
    ||||| ||||| ||||||||||||||||||| ||||||| ||||||||| ||||||||||||||||  |||||||||||||||   ||||||||||||||    
T  49741238 tccaacaatatgttcactttaacatttgttaaaccgatttatttagttgctcctttaaatatcaatagtagtttttataacacatcaattatcaaacaaa 49741139  T
Q  108 ataatatgatataccaacataaaataaatttctgcattcaggatgagtttgagtatgagttcgggttagatacctatata 187  Q
    |||| || | |||  |||||||| ||  ||||||||||| ||| | ||||| ||||| ||||||| | | ||||||||||    
T  49741138 ataacataacatattaacataaagtagttttctgcattcgggacgggtttgggtatgggttcggggtgggtacctatata 49741059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 8 - 111
Target Start/End: Complemental strand, 44615707 - 44615604
Alignment:
Q  8 tccaagaatatattcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagtttttataacacggtaattatcaaacaaa 107  Q
    ||||| ||||| ||||||||||||||||||||||||||||||||||||  ||||||||||||||||  ||||||||||||||||  ||||||||||||||    
T  44615707 tccaacaatatgttcactttaacatttgttagaccgattgatttagtttctcctttaaatatcaataatagtttttataacacgacaattatcaaacaaa 44615608  T
Q  108 ataa 111  Q
    ||||    
T  44615607 ataa 44615604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 8 - 111
Target Start/End: Original strand, 44792862 - 44792965
Alignment:
Q  8 tccaagaatatattcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagtttttataacacggtaattatcaaacaaa 107  Q
    ||||| ||||| ||||||||||||||||||||||||||||||||||||  ||||||||||||||||  ||||||||||||||||  ||||||||||||||    
T  44792862 tccaacaatatgttcactttaacatttgttagaccgattgatttagtttctcctttaaatatcaataatagtttttataacacgacaattatcaaacaaa 44792961  T
Q  108 ataa 111  Q
    ||||    
T  44792962 ataa 44792965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 21 - 115
Target Start/End: Complemental strand, 44632354 - 44632260
Alignment:
Q  21 tcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagtttttataacacggtaattatcaaacaaaataatatg 115  Q
    |||||||||||||||||||||| ||||||||||||| ||||||||||||||||| ||||||||||||||||  |||| |||||||||||||||||    
T  44632354 tcactttaacatttgttagacctattgatttagttgctcctttaaatatcaatgatagtttttataacacgacaattgtcaaacaaaataatatg 44632260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 8 - 224
Target Start/End: Complemental strand, 18354312 - 18354095
Alignment:
Q  8 tccaagaatatattcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagttttta-taacacggtaattatcaaacaa 106  Q
    ||||| ||||| |||||||||||||||| ||||| || ||||||||||| || |||||||||||||| ||||||||| ||||| |  |||||||||||||    
T  18354312 tccaacaatatgttcactttaacatttgatagacggaatgatttagttgatcttttaaatatcaatggtagtttttattaacatgacaattatcaaacaa 18354213  T
Q  107 aataatatgatataccaacataaaataaatttctgcattcaggatgagtttgagtatgagttcgggttagatacctatatatacattacccgtctcttac 206  Q
    ||||| |||| ||| ||||||||||||| ||| | ||||  ||| |||| || ||||  ||||||| | |  || ||||||  | ||||||||| | |||    
T  18354212 aataacatgacatatcaacataaaataattttttacatttgggacgagtatgggtatcggttcggggtgggaacttatatacccgttacccgtcccatac 18354113  T
Q  207 tcgtgttttgaaatcggg 224  Q
     | |||||||||||||||    
T  18354112 ccatgttttgaaatcggg 18354095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 8 - 224
Target Start/End: Original strand, 12494868 - 12495084
Alignment:
Q  8 tccaagaatatattcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagtttttataacacggtaattatcaaacaaa 107  Q
    ||||| ||||| ||||||||||||||||||||||||||  ||||||||| |||||||||||||| || ||||||||||||||||  |||||| |||||||    
T  12494868 tccaacaatatgttcactttaacatttgttagaccgataaatttagttgctcctttaaatatcagtggtagtttttataacacgccaattataaaacaaa 12494967  T
Q  108 ataatatgatataccaacataaaataaatttctgcattcaggatgagtttgagtatgagttcgggttagatacctatatatacattacccgtctcttact 207  Q
    |||| |||  ||  ||||||| | ||  ||||| ||||  ||| | ||||| ||||| ||||| | | | ||||||||||  | |||| |||| | ||      
T  12494968 ataacatgtcatgtcaacatatagtagttttctacatttgggacgggtttgggtatgggttcgaggtgggtacctatatacccgttacacgtcccatatc 12495067  T
Q  208 cgtgttttgaaatcggg 224  Q
    |||||||||||||||||    
T  12495068 cgtgttttgaaatcggg 12495084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 21 - 224
Target Start/End: Complemental strand, 19572730 - 19572527
Alignment:
Q  21 tcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagtttttat-aacacggtaattatcaaacaaaataatatgatat 119  Q
    |||||||||||||||||||||  | ||||||| ||| ||||| || |||||||| |||||||||| |||| || |||||||||||||||||| |||| ||    
T  19572730 tcactttaacatttgttagacgtaatgatttaattgatccttcaa-tatcaatggtagtttttattaacatggcaattatcaaacaaaataacatgacat 19572632  T
Q  120 accaacataaaataaatttctgcattcaggatgagtttgagtatgagttcgggttagatacctatatatacattacccgtctcttactcgtgttttgaaa 219  Q
    | ||||||||||||| ||| | ||||  ||| | || |||||||| ||||||| | | ||||||||||  | ||||| ||| | ||| ||||||||||||    
T  19572631 atcaacataaaataattttttacatttgggacgggtatgagtatgggttcggggtgggtacctatatacccgttacctgtcccatacccgtgttttgaaa 19572532  T
Q  220 tcggg 224  Q
    |||||    
T  19572531 tcggg 19572527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 22 - 224
Target Start/End: Complemental strand, 24236979 - 24236776
Alignment:
Q  22 cactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagttttta-taacacggtaattatcaaacaaaataatatgatata 120  Q
    |||||| |||||||||||||  | ||||||||||| ||||||||||||||||| ||||||||| ||||| |  |||||||||||||||||| || | |||    
T  24236979 cactttcacatttgttagacaaaatgatttagttgatcctttaaatatcaatgatagtttttattaacatgacaattatcaaacaaaataacataacata 24236880  T
Q  121 ccaacataaaataaatttctgcattcaggatgagtttgagtatgagttcgggttagatacctatatatacattacccgtctcttactcgtgttttgaaat 220  Q
     ||||||||||||| ||| | ||||  ||| | ||||||||||| ||||||| | | ||||||||||  | || |||||  | ||| |||||||||| ||    
T  24236879 tcaacataaaataattttttacatttgggacgggtttgagtatgggttcggggtgggtacctatatacccgttccccgttccatacccgtgttttgagat 24236780  T
Q  221 cggg 224  Q
    ||||    
T  24236779 cggg 24236776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 21 - 187
Target Start/End: Complemental strand, 42439889 - 42439722
Alignment:
Q  21 tcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagttttta-taacacggtaattatcaaacaaaataatatgatat 119  Q
    |||||||||||||||||||||  | ||||||||||| ||||||||||||||||| ||||||||| ||||| |  |||||||||||||||||| || | ||    
T  42439889 tcactttaacatttgttagacaaaatgatttagttgatcctttaaatatcaatgatagtttttattaacatgacaattatcaaacaaaataacataacat 42439790  T
Q  120 accaacataaaataaatttctgcattcaggatgagtttgagtatgagttcgggttagatacctatata 187  Q
    | ||||||||| ||| ||| | ||||  |||||||||||  |||| ||||||| | | ||||||||||    
T  42439789 atcaacataaagtaattttttacatttgggatgagtttggatatgggttcggggtgggtacctatata 42439722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 8 - 134
Target Start/End: Complemental strand, 42708062 - 42707935
Alignment:
Q  8 tccaagaatatattcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagttttta-taacacggtaattatcaaacaa 106  Q
    ||||| |||||  |||||||||||| |||||||| || ||||||||||| ||||||||||||||||| ||||||||| ||||| |  |||||||||||||    
T  42708062 tccaacaatatgctcactttaacatctgttagacggaatgatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaa 42707963  T
Q  107 aataatatgatataccaacataaaataa 134  Q
    ||||| |||| ||| |||||||||||||    
T  42707962 aataacatgacatatcaacataaaataa 42707935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 8 - 138
Target Start/End: Complemental strand, 50426887 - 50426756
Alignment:
Q  8 tccaagaatatattcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagttttta-taacacggtaattatcaaacaa 106  Q
    ||||| |||||  |||||||||||||||| |||| || ||||||||||| ||||||||||||||||| ||||||||| ||||| |  |||||||||||||    
T  50426887 tccaacaatatgctcactttaacatttgtaagacggaatgatttagttgatcctttaaatatcaatgatagtttttattaacatgacaattatcaaacaa 50426788  T
Q  107 aataatatgatataccaacataaaataaattt 138  Q
    ||||| |||| ||| ||||||||| |||||||    
T  50426787 aataacatgacatatcaacataaagtaaattt 50426756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 21 - 224
Target Start/End: Complemental strand, 36187439 - 36187235
Alignment:
Q  21 tcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagttttta-taacacggtaattatcaaacaaaataatatgatat 119  Q
    ||||||| |||||||||||||  | ||||||||||| || |||||||||||||| ||||||||| ||||| |  |||||||||||||||||| || | ||    
T  36187439 tcactttcacatttgttagacaaaatgatttagttgatcatttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataacataacat 36187340  T
Q  120 accaacataaaataaatttctgcattcaggatgagtttgagtatgagttcgggttagatacctatatatacattacccgtctcttactcgtgttttgaaa 219  Q
    | ||||||||||||| ||| | ||||  ||| | ||||| ||||| |||| || | | ||||||||||  | ||||||||| | ||| |||||||||| |    
T  36187339 atcaacataaaataactttttacatttgggacgggtttgggtatgggttcagggtgggtacctatatacccgttacccgtcccatacccgtgttttgaga 36187240  T
Q  220 tcggg 224  Q
    |||||    
T  36187239 tcggg 36187235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 8 - 134
Target Start/End: Original strand, 5180902 - 5181029
Alignment:
Q  8 tccaagaatatattcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagttttta-taacacggtaattatcaaacaa 106  Q
    ||||| |||||  ||||||||| |||||||||||  | ||||||||||| ||||||||||||||||| ||||||||| ||||| |  |||||||||||||    
T  5180902 tccaacaatatgctcactttaaaatttgttagacgaaatgatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaa 5181001  T
Q  107 aataatatgatataccaacataaaataa 134  Q
    ||||| |||| ||| |||||||||||||    
T  5181002 aataacatgacatatcaacataaaataa 5181029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 8 - 130
Target Start/End: Complemental strand, 17092191 - 17092068
Alignment:
Q  8 tccaagaatatattcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagttttta-taacacggtaattatcaaacaa 106  Q
    ||||| ||||| ||||||||||||||| |||||  || ||||||||||| ||||||||||||||||| ||||||||| ||||| |  |||||||||||||    
T  17092191 tccaacaatatgttcactttaacatttattagatggaatgatttagttgatcctttaaatatcaatgatagtttttattaacatgacaattatcaaacaa 17092092  T
Q  107 aataatatgatataccaacataaa 130  Q
    ||||| |||| ||| |||||||||    
T  17092091 aataacatgacatatcaacataaa 17092068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 21 - 224
Target Start/End: Original strand, 51421728 - 51421932
Alignment:
Q  21 tcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagttttta-taacacggtaattatcaaacaaaataatatgatat 119  Q
    ||||||| |||||||||||||  | ||||||||||| ||||||||||| ||||| ||||||||| ||||| || |||||||||||||||||| || | ||    
T  51421728 tcactttcacatttgttagacaaaatgatttagttgatcctttaaatagcaatggtagtttttattaacatggcaattatcaaacaaaataacataacat 51421827  T
Q  120 accaacataaaataaatttctgcattcaggatgagtttgagtatgagttcgggttagatacctatatatacattacccgtctcttactcgtgttttgaaa 219  Q
    | ||||||| | ||| ||| | ||||  ||| | ||||| ||||| ||||||| | | ||| |||||| |  ||||||||| | ||| |||||||||| |    
T  51421828 atcaacatagagtaattttttacatttgggacgggtttgggtatgggttcggggtgggtacatatatacatgttacccgtcccatacccgtgttttgaga 51421927  T
Q  220 tcggg 224  Q
    |||||    
T  51421928 tcggg 51421932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 8 - 130
Target Start/End: Complemental strand, 3628219 - 3628096
Alignment:
Q  8 tccaagaatatattcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagttttta-taacacggtaattatcaaacaa 106  Q
    ||||| |||||  |||||||||||||||||||||  | ||||||||||| ||| |||||||| |||| ||||||||| ||||| | ||||||||||||||    
T  3628219 tccaacaatatgctcactttaacatttgttagacgtaatgatttagttgatccgttaaatattaatggtagtttttattaacatgataattatcaaacaa 3628120  T
Q  107 aataatatgatataccaacataaa 130  Q
    ||||| |||| ||| |||||||||    
T  3628119 aataacatgacatatcaacataaa 3628096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 21 - 233
Target Start/End: Complemental strand, 49250992 - 49250779
Alignment:
Q  21 tcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagtttttat-aacacggtaattatcaaacaaaataatatgatat 119  Q
    ||||||| |||||||||||||  | | ||||||||| || |||||||||||||| |||||||||| |||| |  |||||||||||||||||  || | ||    
T  49250992 tcactttcacatttgttagacaaaataatttagttgatcttttaaatatcaatgatagtttttatcaacatgacaattatcaaacaaaatagcataacat 49250893  T
Q  120 accaacataaaataaatttctgcattcaggatgagtttgagtatgagttcgggttagatacctatatatacattacccgtctcttactcgtgttttgaaa 219  Q
    | ||||||||| ||  ||| | ||||  ||| | ||||| ||||| ||||| | | ||||||||||||  ||||||||||| | ||| |||||||||| |    
T  49250892 atcaacataaagtagttttttacatttgggacgggtttgggtatgggttcgaggtggatacctatatacccattacccgtcccatacccgtgttttgaga 49250793  T
Q  220 tcgggccaaactca 233  Q
    |||||  |||||||    
T  49250792 tcggggaaaactca 49250779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 21 - 224
Target Start/End: Original strand, 29936286 - 29936490
Alignment:
Q  21 tcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagttttta-taacacggtaattatcaaacaaaataatatgatat 119  Q
    ||||||| |||||||||||||  | ||||||||||| ||||||||||||||||| ||||||||| ||||| |  |||||| ||| ||||||| || | ||    
T  29936286 tcactttcacatttgttagacaaaatgatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattataaaaaaaaataacattacat 29936385  T
Q  120 accaacataaaataaatttctgcattcaggatgagtttgagtatgagttcgggttagatacctatatatacattacccgtctcttactcgtgttttgaaa 219  Q
    | ||||||||| ||| ||| | ||||  ||| | ||||| ||||| ||||||| | | ||||||||||  | ||||||||| | ||| ||| |||||| |    
T  29936386 atcaacataaagtaattttttacatttgggacgggtttgggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtattttgaga 29936485  T
Q  220 tcggg 224  Q
    |||||    
T  29936486 tcggg 29936490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 8 - 111
Target Start/End: Complemental strand, 34060251 - 34060147
Alignment:
Q  8 tccaagaatatattcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagttttta-taacacggtaattatcaaacaa 106  Q
    ||||| |||||  ||||||||||||||||||||| || ||||||||||| ||||||||||||||||| | ||||||| ||||| |  |||||||||||||    
T  34060251 tccaacaatatgctcactttaacatttgttagacggaatgatttagttgatcctttaaatatcaatggttgtttttattaacatgacaattatcaaacaa 34060152  T
Q  107 aataa 111  Q
    |||||    
T  34060151 aataa 34060147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 28 - 121
Target Start/End: Original strand, 16408823 - 16408917
Alignment:
Q  28 aacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagttttta-taacacggtaattatcaaacaaaataatatgatatac 121  Q
    |||||||||||||| || ||||||||||| ||||||||||||||||| ||||||||| ||||| |  |||||||||||||||||| |||| ||||    
T  16408823 aacatttgttagacggaatgatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataacatgacatac 16408917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 21 - 233
Target Start/End: Original strand, 28297803 - 28298017
Alignment:
Q  21 tcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagttttta-taacacggtaattatcaaacaaaataatatgatat 119  Q
    ||||||| |||||||||||||  | | ||||||||| ||||||||||||||||| ||||||||| ||||| |  |||||||||||||||||| || | ||    
T  28297803 tcactttcacatttgttagacaaaataatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataacataacat 28297902  T
Q  120 accaacataaaata-aatttctgcattcaggatgagtttgagtatgagttcgggttagatacctatatatacattacccgtctcttactcgtgttttgaa 218  Q
    | ||||||||||||   ||| | ||||  ||| | ||||| ||||| ||||||| | | ||||||||||  | ||||||||| | ||| ||||||| ||     
T  28297903 atcaacataaaatagtttttttacatttgggacgggtttgggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgag 28298002  T
Q  219 atcgggccaaactca 233  Q
    ||||||  |||||||    
T  28298003 atcggggaaaactca 28298017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 29 - 164
Target Start/End: Original strand, 24710736 - 24710872
Alignment:
Q  29 acatttgttagaccgattgatttagttgttcctttaaatatcaatgttagttttta-taacacggtaattatcaaacaaaataatatgatataccaacat 127  Q
    |||||||||||||  | ||||||||||| ||||||||||||||||| ||||||||| ||||| |  |||||||||||||||||| || || || ||||||    
T  24710736 acatttgttagacaaaatgatttagttgatcctttaaatatcaatgatagtttttattaacatgacaattatcaaacaaaataacataatgtatcaacat 24710835  T
Q  128 aaaataaatttctgcattcaggatgagtttgagtatg 164  Q
    ||| ||| ||| | ||||  ||| | |||||||||||    
T  24710836 aaagtaattttttacatttgggacgggtttgagtatg 24710872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 8 - 130
Target Start/End: Original strand, 23966729 - 23966852
Alignment:
Q  8 tccaagaatatattcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagtttttat-aacacggtaattatcaaacaa 106  Q
    ||||| |||||  ||||||||||||||||||||  || ||||||||||| | ||||||||||||||  |||||||||| |||| |  |||||||||||||    
T  23966729 tccaacaatatgctcactttaacatttgttagatggaatgatttagttgatactttaaatatcaatagtagtttttataaacatgacaattatcaaacaa 23966828  T
Q  107 aataatatgatataccaacataaa 130  Q
    ||||| || | ||| |||||||||    
T  23966829 aataacataacatatcaacataaa 23966852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 8 - 134
Target Start/End: Original strand, 39616160 - 39616287
Alignment:
Q  8 tccaagaatatattcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagttttta-taacacggtaattatcaaacaa 106  Q
    ||||| |||||  |||||||||||| |||||||| || |||||||  || || |||||||||||||| || |||||| ||||| | |||||| |||||||    
T  39616160 tccaacaatatgctcactttaacatctgttagacggaatgatttaactgatcatttaaatatcaatggtaatttttattaacatgataattagcaaacaa 39616259  T
Q  107 aataatatgatataccaacataaaataa 134  Q
    ||||| |||| ||| |||||||||||||    
T  39616260 aataacatgacatatcaacataaaataa 39616287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 21 - 130
Target Start/End: Original strand, 34610943 - 34611053
Alignment:
Q  21 tcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagttttta-taacacggtaattatcaaacaaaataatatgatat 119  Q
    ||||||| |||||||||||||  | | ||||||||| || |||||||||||||| ||||||||| ||||| |  ||||||||||||||||||||| | ||    
T  34610943 tcactttcacatttgttagacaaaattatttagttgatcttttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataatataacat 34611042  T
Q  120 accaacataaa 130  Q
    | |||||||||    
T  34611043 atcaacataaa 34611053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 22 - 110
Target Start/End: Original strand, 13020559 - 13020648
Alignment:
Q  22 cactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagttttta-taacacggtaattatcaaacaaaata 110  Q
    |||||||| ||||||||||| || ||||||||||| | ||||||||||||||| ||||||||| ||||| |  |||||||||||||||||    
T  13020559 cactttaatatttgttagacggaatgatttagttgatactttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaata 13020648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 60 - 146
Target Start/End: Original strand, 2514677 - 2514764
Alignment:
Q  60 ctttaaatatcaatgttagtttttataacacggtaattatcaaacaaaataatatgatat-accaacataaaataaatttctgcattc 146  Q
    ||||||||||||||| |||||||||| |||||| |||||||||||||||||| |||| ||   ||||||||||||| ||| |||||||    
T  2514677 ctttaaatatcaatggtagtttttattacacggcaattatcaaacaaaataacatgacatgttcaacataaaataattttatgcattc 2514764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 21 - 130
Target Start/End: Original strand, 20774502 - 20774612
Alignment:
Q  21 tcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagttttta-taacacggtaattatcaaacaaaataatatgatat 119  Q
    ||||||| |||||||||||||  | | ||||||||| ||||||||||||||||   |||||||| ||||| |  |||||||||||||||||| || | ||    
T  20774502 tcactttcacatttgttagacaaaattatttagttgatcctttaaatatcaataaaagtttttattaacatgacaattatcaaacaaaataacataacat 20774601  T
Q  120 accaacataaa 130  Q
    | |||||||||    
T  20774602 atcaacataaa 20774612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 15 - 89
Target Start/End: Complemental strand, 8679758 - 8679684
Alignment:
Q  15 atatattcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagtttttataaca 89  Q
    ||||||||||||||||||||  | |||  | ||||||  ||| ||||||||||||||||| || |||||||||||    
T  8679758 atatattcactttaacatttccttgactaaatgatttgattgctcctttaaatatcaatgataatttttataaca 8679684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 225 - 283
Target Start/End: Complemental strand, 40087460 - 40087402
Alignment:
Q  225 ccaaactcaatcaaaatggagaaaatccgtcaaattaaatttgattcggacgtataacc 283  Q
    ||||||||| |||||| || |||||||||||||||| |||||| ||| |||| ||||||    
T  40087460 ccaaactcagtcaaaacggggaaaatccgtcaaattgaatttggttcagacggataacc 40087402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 94 - 187
Target Start/End: Original strand, 13390357 - 13390450
Alignment:
Q  94 aattatcaaacaaaataatatgatataccaacataaaataaatttctgcattcaggatgagtttgagtatgagttcgggttagatacctatata 187  Q
    |||||||||||||||||| |||| ||| ||||||||| ||| ||| | ||||  ||| | || || ||||||||||||| | | ||||||||||    
T  13390357 aattatcaaacaaaataacatgacatatcaacataaagtaattttttacatttgggacgggtatgggtatgagttcggggtgggtacctatata 13390450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 93; Significance: 5e-45; HSPs: 41)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 8 - 224
Target Start/End: Complemental strand, 1724542 - 1724326
Alignment:
Q  8 tccaagaatatattcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagtttttataacacggtaattatcaaacaaa 107  Q
    ||||| ||||| ||||||||||||||||||||||||||| ||||||||| ||||||||||||||||  |||||||||||||||   ||||||| ||||||    
T  1724542 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttataacacatcaattatctaacaaa 1724443  T
Q  108 ataatatgatataccaacataaaataaatttctgcattcaggatgagtttgagtatgagttcgggttagatacctatatatacattacccgtctcttact 207  Q
    |||| |||| ||| ||||||||| ||  ||||||||||| ||| | ||||| ||||| ||||||| | | ||||||||||  | ||||||||| | |||     
T  1724442 ataacatgacatatcaacataaagtagttttctgcattcgggacgggtttgggtatgggttcggggtgggtacctatataaccgttacccgtcccatacc 1724343  T
Q  208 cgtgttttgaaatcggg 224  Q
    | |||||||||||||||    
T  1724342 catgttttgaaatcggg 1724326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 8 - 224
Target Start/End: Original strand, 26564694 - 26564910
Alignment:
Q  8 tccaagaatatattcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagtttttataacacggtaattatcaaacaaa 107  Q
    ||||| ||||| |||||||||||||||||| |||||||||||||||||||||| ||||||||||||| ||||||||||||||||| | ||||||||||||    
T  26564694 tccaacaatatgttcactttaacatttgtttgaccgattgatttagttgttccgttaaatatcaatgatagtttttataacacggcagttatcaaacaaa 26564793  T
Q  108 ataatatgatataccaacataaaataaatttctgcattcaggatgagtttgagtatgagttcgggttagatacctatatatacattacccgtctcttact 207  Q
     ||| |||| ||| ||||||||| ||  ||||||||||  ||| | ||||| |||||  |||||| | | ||||||||||  | ||||||||| | |||     
T  26564794 ctaacatgacatatcaacataaagtagttttctgcatttgggacgggtttgggtatggtttcggggtgggtacctatatacccgttacccgtcccatacc 26564893  T
Q  208 cgtgttttgaaatcggg 224  Q
    || ||||||||||||||    
T  26564894 cgcgttttgaaatcggg 26564910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 21 - 224
Target Start/End: Complemental strand, 12825680 - 12825477
Alignment:
Q  21 tcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagtttttataacacggtaattatcaaacaaaataatatgatata 120  Q
    ||||||||| |||| ||||||| ||||||||||||| |||||||||||||||| ||||||||||||||||| ||||||||||||||||||| ||||||||    
T  12825680 tcactttaatatttattagaccaattgatttagttgctcctttaaatatcaattttagtttttataacacgataattatcaaacaaaataacatgatata 12825581  T
Q  121 ccaacataaaataaatttctgcattcaggatgagtttgagtatgagttcgggttagatacctatatatacattacccgtctcttactcgtgttttgaaat 220  Q
     ||||||||| ||| |||||||| || |||   ||||| ||||  |||| || | | ||| ||||||| | ||||||||| | ||| |||||||||||||    
T  12825580 tcaacataaagtaattttctgcactcgggacaggtttgggtataggttcagggtgggtacgtatatatccgttacccgtcccatacccgtgttttgaaat 12825481  T
Q  221 cggg 224  Q
    ||||    
T  12825480 cggg 12825477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 21 - 187
Target Start/End: Original strand, 19534331 - 19534497
Alignment:
Q  21 tcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagtttttataacacggtaattatcaaacaaaataatatgatata 120  Q
    |||||||||||||||||||||||||||||||||||| ||||||| ||||||||| ||||||||||||||||  |||||||||||||||||| |||| |||    
T  19534331 tcactttaacatttgttagaccgattgatttagttgctcctttagatatcaatggtagtttttataacacgacaattatcaaacaaaataacatgacata 19534430  T
Q  121 ccaacataaaataaatttctgcattcaggatgagtttgagtatgagttcgggttagatacctatata 187  Q
     ||||||||||||| ||||| |||||  || | ||||| ||||||||||| | | | ||||||||||    
T  19534431 tcaacataaaataattttctacattcgtgacgggtttgggtatgagttcgaggtgggtacctatata 19534497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 21 - 199
Target Start/End: Original strand, 37348999 - 37349177
Alignment:
Q  21 tcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagtttttataacacggtaattatcaaacaaaataatatgatata 120  Q
    ||||||||| |||||||||||||||| ||||||||| ||||||||||||||| | ||||||||||||| ||  |||||||||||||||||| |||  |||    
T  37348999 tcactttaagatttgttagaccgattaatttagttgctcctttaaatatcaacggtagtttttataacgcgagaattatcaaacaaaataacatggcata 37349098  T
Q  121 ccaacataaaataaatttctgcattcaggatgagtttgagtatgagttcgggttagatacctatatatacattacccgt 199  Q
     ||||||||||||| ||||||||||| ||| | ||||| ||||| |||| || | ||||||||||||  ||||||||||    
T  37349099 tcaacataaaataattttctgcattcgggacgggtttgggtatgggttcagggtggatacctatatacccattacccgt 37349177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 8 - 172
Target Start/End: Complemental strand, 13770687 - 13770523
Alignment:
Q  8 tccaagaatatattcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagtttttataacacggtaattatcaaacaaa 107  Q
    ||||| ||||| |||||||||||||||||| |||||||||||||||||| ||||| |||||| |||| | ||||||||||||||||||||||||||||||    
T  13770687 tccaacaatatgttcactttaacatttgtttgaccgattgatttagttgctccttcaaatattaatggtcgtttttataacacggtaattatcaaacaaa 13770588  T
Q  108 ataatatgatataccaacataaaataaatttctgcattcaggatgagtttgagtatgagttcggg 172  Q
    |||| |||   ||  |||||||||||  ||| ||||||| ||| | |||||||||||||||||||    
T  13770587 ataacatggcttattaacataaaatagttttatgcattcgggacgggtttgagtatgagttcggg 13770523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 14 - 111
Target Start/End: Complemental strand, 6482262 - 6482165
Alignment:
Q  14 aatatattcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagtttttataacacggtaattatcaaacaaaataa 111  Q
    ||||| ||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||  ||||||||||||||||||    
T  6482262 aatatgttcactttaacatttgttagaccgattgatttagtttctcctttaaatatcaatgttagtttttataacacgacaattatcaaacaaaataa 6482165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 14 - 172
Target Start/End: Complemental strand, 7985348 - 7985189
Alignment:
Q  14 aatatattcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttag-tttttataacacggtaattatcaaacaaaataat 112  Q
    ||||| ||||||||||||||||||||||| ||||||||||||| || |||||||||||| | ||| |||||||||||||  ||||||||||||||||||     
T  7985348 aatattttcactttaacatttgttagaccaattgatttagttgctcatttaaatatcaacggtagttttttataacacgacaattatcaaacaaaataac 7985249  T
Q  113 atgatataccaacataaaataaatttctgcattcaggatgagtttgagtatgagttcggg 172  Q
    ||||  || ||||||||||||  ||||||||||| ||| | ||||| ||||| |||||||    
T  7985248 atgacttatcaacataaaatacttttctgcattcgggacgggtttgggtatgggttcggg 7985189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 25 - 220
Target Start/End: Original strand, 37107291 - 37107486
Alignment:
Q  25 tttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagtttttataacacggtaattatcaaacaaaataatatgatataccaa 124  Q
    ||||| |||||| ||||||||||||||||||| | ||||||||| ||||| |||||||||||||| || |||||||||||||||||| |||| ||| |||    
T  37107291 tttaatatttgtcagaccgattgatttagttgcttctttaaataccaatggtagtttttataacatggcaattatcaaacaaaataacatgacatatcaa 37107390  T
Q  125 cataaaataaatttctgcattcaggatgagtttgagtatgagttcgggttagatacctatatatacattacccgtctcttactcgtgttttgaaat 220  Q
    |||||| ||| ||||||||||| ||||   |||  |||| | |||||| | | ||||||||||  | ||||||||| | ||| |||||||||||||    
T  37107391 cataaagtaattttctgcattcgggatatattttggtataaattcggggtgggtacctatatacccgttacccgtcccatacccgtgttttgaaat 37107486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 14 - 140
Target Start/End: Original strand, 425692 - 425818
Alignment:
Q  14 aatatattcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagtttttataacacggtaattatcaaacaaaataata 113  Q
    ||||| |||||||||| ||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||| |  |||||||||||||||||| |    
T  425692 aatatgttcactttaagatttgttagaccgattgatttagttgttcttttaaatatcaatggtagtttttataacatgacaattatcaaacaaaataaca 425791  T
Q  114 tgatataccaacataaaataaatttct 140  Q
    ||  ||| ||||||||| ||| |||||    
T  425792 tggcatatcaacataaagtaattttct 425818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 9 - 158
Target Start/End: Original strand, 39188379 - 39188527
Alignment:
Q  9 ccaagaatatattcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagtttttataacacggtaattatcaaacaaaa 108  Q
    |||| ||||| ||||||||||||||||||||| |||||||||||||| || |||||||||| |||| |||||||| |||||||  | |||||||||||||    
T  39188379 ccaacaatatgttcactttaacatttgttagaacgattgatttagttttttctttaaatataaatggtagttttt-taacacgacagttatcaaacaaaa 39188477  T
Q  109 taatatgatataccaacataaaataaatttctgcattcaggatgagtttg 158  Q
    ||| |||| ||| |||||||||| || ||| ||||||| |||||||||||    
T  39188478 taacatgacatatcaacataaaacaattttatgcattcgggatgagtttg 39188527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 8 - 111
Target Start/End: Complemental strand, 29755562 - 29755459
Alignment:
Q  8 tccaagaatatattcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagtttttataacacggtaattatcaaacaaa 107  Q
    ||||| |||||| ||| |||||||||||||||| ||||||||||||||  | ||||||||||||||| |||| |||||||||||||||||||||||||||    
T  29755562 tccaacaatatactcattttaacatttgttagatcgattgatttagttacttctttaaatatcaatggtagtgtttataacacggtaattatcaaacaaa 29755463  T
Q  108 ataa 111  Q
    ||||    
T  29755462 ataa 29755459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 21 - 224
Target Start/End: Complemental strand, 32596403 - 32596200
Alignment:
Q  21 tcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagtttttataacacggtaattatcaaacaaaataatatgatata 120  Q
    ||||||||| |||||||||||  | ||||||||||||||||| |||||| |||| |||||||||||||| |  ||||||||||| |||| | ||| ||||    
T  32596403 tcactttaaaatttgttagacttaatgatttagttgttccttcaaatattaatgctagtttttataacatgacaattatcaaaccaaatgacatggtata 32596304  T
Q  121 ccaacataaaataaatttctgcattcaggatgagtttgagtatgagttcgggttagatacctatatatacattacccgtctcttactcgtgttttgaaat 220  Q
     ||||||||||||| ||||| |||||  ||  |||||| ||||||||| | | | |  |||||||||  | ||||||||| | ||| |||||||||||||    
T  32596303 tcaacataaaataattttctacattcgagacaagtttgggtatgagtttgaggtggggacctatatacccgttacccgtcccatacccgtgttttgaaat 32596204  T
Q  221 cggg 224  Q
    ||||    
T  32596203 cggg 32596200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 21 - 233
Target Start/End: Complemental strand, 47550573 - 47550360
Alignment:
Q  21 tcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagttttta-taacacggtaattatcaaacaaaataatatgatat 119  Q
    ||||||| |||||||||||||  | ||||||||||| ||||||||||||||||| ||||||||| ||||| |  |||||||||||||||||| || | ||    
T  47550573 tcactttcacatttgttagacaaaatgatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataacataacat 47550474  T
Q  120 accaacataaaataaatttctgcattcaggatgagtttgagtatgagttcgggttagatacctatatatacattacccgtctcttactcgtgttttgaaa 219  Q
    | ||||||||||||| ||| | ||||  ||| | ||||| ||||| ||||||| | | ||||||||||    ||||||||| | ||| |||||||||| |    
T  47550473 atcaacataaaataattttttacatttgggacgggtttgggtatgggttcggggtgggtacctatatacctgttacccgtcccatacccgtgttttgaga 47550374  T
Q  220 tcgggccaaactca 233  Q
    |||||  |||||||    
T  47550373 tcggggaaaactca 47550360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 8 - 116
Target Start/End: Original strand, 9230146 - 9230257
Alignment:
Q  8 tccaagaatatattcacttt-aacatttgttagaccgattgatttagttg--ttcctttaaatatcaatgttagtttttataacacggtaattatcaaac 104  Q
    ||||| ||||| |||||||| |||||||||||||||||||||||||||||  |||||||||||||||||| ||||||||||||||||  | |||||||||    
T  9230146 tccaacaatatgttcacttttaacatttgttagaccgattgatttagttgctttcctttaaatatcaatggtagtttttataacacgacagttatcaaac 9230245  T
Q  105 aaaataatatga 116  Q
    ||||||| ||||    
T  9230246 aaaataacatga 9230257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 21 - 224
Target Start/End: Original strand, 31752331 - 31752535
Alignment:
Q  21 tcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagttttta-taacacggtaattatcaaacaaaataatatgatat 119  Q
    ||||||||||||||| ||||| || ||||||||||| || ||||||||||| |||||||||||| ||||| |  |||||||||||||||||| |||| ||    
T  31752331 tcactttaacatttgatagacggaatgatttagttgatcttttaaatatcattgttagtttttattaacatgacaattatcaaacaaaataacatgacat 31752430  T
Q  120 accaacataaaataaatttctgcattcaggatgagtttgagtatgagttcgggttagatacctatatatacattacccgtctcttactcgtgttttgaaa 219  Q
    | ||||||||| ||| ||| | ||||  ||| | || || ||||| ||||||| | |  |||||||||  | |||| |||||| ||| ||||||||||||    
T  31752431 atcaacataaagtaattttttacatttgggacgggtatgggtatgggttcggggtgggaacctatatactcgttactcgtctcatacccgtgttttgaaa 31752530  T
Q  220 tcggg 224  Q
    |||||    
T  31752531 tcggg 31752535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 8 - 214
Target Start/End: Original strand, 21423723 - 21423930
Alignment:
Q  8 tccaagaatatattcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagttttta-taacacggtaattatcaaacaa 106  Q
    ||||| |||| ||||||||| |||||||||||||  | | ||||||||| ||||||||||||||||| ||||||||| ||||| |  |||||||||||||    
T  21423723 tccaacaataaattcactttcacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaa 21423822  T
Q  107 aataatatgatataccaacataaaataaatttctgcattcaggatgagtttgagtatgagttcgggttagatacctatatatacattacccgtctcttac 206  Q
    |||||||| | ||| ||||||||| ||  ||| | ||||  ||| | ||||| ||||| ||| ||| | | ||||||||||  | ||||||||||| |||    
T  21423823 aataatataacatatcaacataaagtagttttttacatttgggacgggtttgtgtatgggtttggggtgggtacctatatacccgttacccgtctcatac 21423922  T
Q  207 tcgtgttt 214  Q
     |||||||    
T  21423923 ccgtgttt 21423930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 8 - 130
Target Start/End: Original strand, 42774623 - 42774746
Alignment:
Q  8 tccaagaatatattcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagttttta-taacacggtaattatcaaacaa 106  Q
    ||||| ||||| |||| ||||||||||||||||  || ||||||||||| ||||||||||||||||| ||||||||| ||||| |  |||||||||||||    
T  42774623 tccaacaatatgttcattttaacatttgttagaaggaatgatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaa 42774722  T
Q  107 aataatatgatataccaacataaa 130  Q
    ||||| |||| ||| |||||||||    
T  42774723 aataacatgacatatcaacataaa 42774746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 8 - 224
Target Start/End: Original strand, 48459343 - 48459560
Alignment:
Q  8 tccaagaatatattcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagttttta-taacacggtaattatcaaacaa 106  Q
    ||||| |||||  |||||||||||||| ||||||  | ||||||||||| ||||||||||||||||| ||||||||| ||||| |  |||||||||||||    
T  48459343 tccaacaatatgctcactttaacattttttagacaaaatgatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaa 48459442  T
Q  107 aataatatgatataccaacataaaataaatttctgcattcaggatgagtttgagtatgagttcgggttagatacctatatatacattacccgtctcttac 206  Q
    ||||| || | ||| ||||||||| ||| ||| | ||||  ||||| || || ||||| ||||||| | | ||||||||||    ||||||||  | |||    
T  48459443 aataacataacatatcaacataaagtaattttttacatttgggatgggtatgggtatgggttcggggtgggtacctatatacctgttacccgttccatac 48459542  T
Q  207 tcgtgttttgaaatcggg 224  Q
     | |||||||||||||||    
T  48459543 ccatgttttgaaatcggg 48459560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 21 - 223
Target Start/End: Original strand, 32585363 - 32585567
Alignment:
Q  21 tcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatg-ttagttttta-taacacggtaattatcaaacaaaataatatgata 118  Q
    ||||||||||| ||||||||| || ||||||||||| ||||||||||||||||| |||||||||| ||||| |  |||||||||||||||||| | || |    
T  32585363 tcactttaacaattgttagacggaatgatttagttgatcctttaaatatcaatgattagtttttattaacatgacaattatcaaacaaaataacaagaca 32585462  T
Q  119 taccaacataaaataaatttctgcattcaggatgagtttgagtatgagttcgggttagatacctatatatacattacccgtctcttactcgtgttttgaa 218  Q
    ||  |||||||| ||| ||| | ||||  ||| | ||||| ||||| |||| || | | ||||||||||  | ||||| ||| | ||| |||||||||||    
T  32585463 tataaacataaagtaagtttttacatttgggacgggtttgggtatgggttcagggtgggtacctatatacccgttacctgtcccatacccgtgttttgaa 32585562  T
Q  219 atcgg 223  Q
    |||||    
T  32585563 atcgg 32585567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 21 - 224
Target Start/End: Original strand, 43893103 - 43893307
Alignment:
Q  21 tcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagttttta-taacacggtaattatcaaacaaaataatatgatat 119  Q
    ||||||| |||||||||||||  | | ||||||||| ||||||||||||||||| ||||||||| ||||| |  |||||||||||||||||| || | ||    
T  43893103 tcactttcacatttgttagacaaaataatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataacataacat 43893202  T
Q  120 accaacataaaataaatttctgcattcaggatgagtttgagtatgagttcgggttagatacctatatatacattacccgtctcttactcgtgttttgaaa 219  Q
    | ||||||||| ||  ||| | ||||  ||| | ||||| |||||| |||||| | ||||||||||||  | ||||||||| | ||| ||||||| || |    
T  43893203 atcaacataaagtagttttttacatttgggacgggtttgggtatgaattcggggtggatacctatatacccgttacccgtcccatacccgtgtttcgaga 43893302  T
Q  220 tcggg 224  Q
    |||||    
T  43893303 tcggg 43893307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 26 - 116
Target Start/End: Original strand, 39375160 - 39375250
Alignment:
Q  26 ttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagtttttataacacggtaattatcaaacaaaataatatga 116  Q
    |||||||||||| ||  |||| |||||||||||||||||||||| | || ||||||||||||||||| |||||||||||||||||| ||||    
T  39375160 ttaacatttgttcgattgatttatttagttgttcctttaaatattagtggtagtttttataacacggcaattatcaaacaaaataacatga 39375250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 21 - 224
Target Start/End: Complemental strand, 5902834 - 5902630
Alignment:
Q  21 tcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagttttta-taacacggtaattatcaaacaaaataatatgatat 119  Q
    ||||||| |||||||||||||  | | ||||||||| ||||||||||||||||| ||||||||| ||||| |  |||||||||||||||||| || | ||    
T  5902834 tcactttcacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataagataacat 5902735  T
Q  120 accaacataaaataaatttctgcattcaggatgagtttgagtatgagttcgggttagatacctatatatacattacccgtctcttactcgtgttttgaaa 219  Q
    | ||||||||| ||  ||| | ||||  ||| | ||||| ||||| ||||||| | | ||||||||||  | ||||||||| | ||| ||||||| || |    
T  5902734 atcaacataaagtagttttttacatttgggacgggtttgggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgaga 5902635  T
Q  220 tcggg 224  Q
    |||||    
T  5902634 tcggg 5902630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 21 - 223
Target Start/End: Complemental strand, 6382493 - 6382289
Alignment:
Q  21 tcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagttttta-taacacggtaattatcaaacaaaataatatgatat 119  Q
    ||||||| |||||||||||||  | | ||||||||| ||||||||||||||||| ||||||||| ||||| |  |||||||||||||||||| || | ||    
T  6382493 tcactttcacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataacataacat 6382394  T
Q  120 accaacataaaata-aatttctgcattcaggatgagtttgagtatgagttcgggttagatacctatatatacattacccgtctcttactcgtgttttgaa 218  Q
    | ||||||||||||   ||| | ||||  ||| | ||||| ||||| ||||||| | | ||||||||||  | ||||||||| | ||| ||||||||||     
T  6382393 atcaacataaaatagtttttttacatttgggacgggtttgggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgttttgag 6382294  T
Q  219 atcgg 223  Q
    |||||    
T  6382293 atcgg 6382289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 21 - 134
Target Start/End: Complemental strand, 47239605 - 47239491
Alignment:
Q  21 tcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagttttta-taacacggtaattatcaaacaaaataatatgatat 119  Q
    ||||||||||||||| || |   | ||||||||||| ||||||||||||||||| ||||||||| ||||| |  |||||||||||||||||| |||| ||    
T  47239605 tcactttaacatttgataaatgaaatgatttagttgatcctttaaatatcaatgatagtttttattaacatgacaattatcaaacaaaataacatgacat 47239506  T
Q  120 accaacataaaataa 134  Q
    | |||||||||||||    
T  47239505 atcaacataaaataa 47239491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 26 - 108
Target Start/End: Complemental strand, 15987455 - 15987372
Alignment:
Q  26 ttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagttttta-taacacggtaattatcaaacaaaa 108  Q
    |||||||||||||||| || ||||||||||| ||||||||||||||||| ||||||||| ||||| |  |||||||||||||||    
T  15987455 ttaacatttgttagacggaatgatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaa 15987372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 25 - 111
Target Start/End: Complemental strand, 28695357 - 28695271
Alignment:
Q  25 tttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagtttttataacacggtaattatcaaacaaaataa 111  Q
    |||||||||||||| ||||| ||||||||||| |||||||||||| |||| |||||||||||||  |  |||||||||| |||||||    
T  28695357 tttaacatttgttaaaccgaatgatttagttgctcctttaaatattaatgatagtttttataacgtgacaattatcaaataaaataa 28695271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 21 - 130
Target Start/End: Complemental strand, 31918779 - 31918669
Alignment:
Q  21 tcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagttttta-taacacggtaattatcaaacaaaataatatgatat 119  Q
    ||||||| |||||||||||||  | | ||||||||| ||||||||||||||||| ||||||||| ||||| |  |||||||||||||||||| || | ||    
T  31918779 tcactttcacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataacataacat 31918680  T
Q  120 accaacataaa 130  Q
    | |||||||||    
T  31918679 atcaacataaa 31918669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 21 - 224
Target Start/End: Original strand, 11027947 - 11028152
Alignment:
Q  21 tcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagttttta-taacacggtaattatcaaacaaaataatatgatat 119  Q
    ||||||| |||||||||||||  | ||||||||||| |||||||||||| |||  ||||||||| ||||| |  |||||||||||||||||| || | ||    
T  11027947 tcactttcacatttgttagacaaaatgatttagttgatcctttaaatataaatagtagtttttattaacatgacaattatcaaacaaaataacataacat 11028046  T
Q  120 accaacataaaataa-atttctgcattcaggatgagtttgagtatgagttcgggttagatacctatatatacattacccgtctcttactcgtgttttgaa 218  Q
    | ||| ||||| |||  ||| | ||||  |||   ||||| ||||||||||||| | | ||||||||||  | ||||||||| | ||| ||||||||||     
T  11028047 atcaatataaagtaatttttttacatttgggacaggtttgggtatgagttcggggtgggtacctatatacccgttacccgtcccatacccgtgttttgag 11028146  T
Q  219 atcggg 224  Q
    ||||||    
T  11028147 atcggg 11028152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 21 - 224
Target Start/End: Original strand, 7608845 - 7609049
Alignment:
Q  21 tcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagttttta-taacacggtaattatcaaacaaaataatatgatat 119  Q
    ||||||| |||||||||||||  | | ||||||||| |||||||||||||||||  |||||||| ||||| |  |||||||||||||||||| || | ||    
T  7608845 tcactttcacatttgttagacaaaattatttagttgatcctttaaatatcaatgacagtttttattaacatgacaattatcaaacaaaataacataacat 7608944  T
Q  120 accaacataaaataaatttctgcattcaggatgagtttgagtatgagttcgggttagatacctatatatacattacccgtctcttactcgtgttttgaaa 219  Q
    | ||||||| | ||  ||| | ||||  ||| | ||||| ||||| ||||||| | | ||||||||||  | ||||||||| | ||| ||||||| || |    
T  7608945 atcaacatagagtagttttttacatttgggacgggtttgggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgaga 7609044  T
Q  220 tcggg 224  Q
    |||||    
T  7609045 tcggg 7609049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 8 - 111
Target Start/End: Original strand, 39046815 - 39046919
Alignment:
Q  8 tccaagaatatattcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagttttta-taacacggtaattatcaaacaa 106  Q
    ||||| |||||  ||| ||||||||||||||||| || ||||||||||  ||||||||||||||| | ||||||||| ||||| |  |||||||||||||    
T  39046815 tccaacaatatgctcattttaacatttgttagacggaatgatttagttaatcctttaaatatcaacggtagtttttattaacatgacaattatcaaacaa 39046914  T
Q  107 aataa 111  Q
    |||||    
T  39046915 aataa 39046919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 21 - 223
Target Start/End: Complemental strand, 11123089 - 11122886
Alignment:
Q  21 tcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagttttta-taacacggtaattatcaaacaaaataatatgatat 119  Q
    ||||||| |||||||||||||  | | ||||||||| ||||||||||||||||| || |||||| ||||| |  |||||| ||||||||||| |  | ||    
T  11123089 tcactttcacatttgttagacaaaattatttagttgatcctttaaatatcaatggtactttttattaacatgacaattataaaacaaaataacaaaacat 11122990  T
Q  120 accaacataaaataaatttctgcattcaggatgagtttgagtatgagttcgggttagatacctatatatacattacccgtctcttactcgtgttttgaaa 219  Q
    | ||||||||| ||  ||| | ||||  ||| | ||||||||||| ||||||| | | ||||||||||  | ||||||||| | ||| ||||||| || |    
T  11122989 atcaacataaagtagttttttacatttgggacgggtttgagtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgaga 11122890  T
Q  220 tcgg 223  Q
    ||||    
T  11122889 tcgg 11122886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 8 - 130
Target Start/End: Original strand, 42299653 - 42299776
Alignment:
Q  8 tccaagaatatattcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagttttta-taacacggtaattatcaaacaa 106  Q
    ||||| ||||| |||||||||||||||||||||  |  ||||||||||| || ||||||||||||   ||||||||| ||||| |  |||||||||||||    
T  42299653 tccaacaatatgttcactttaacatttgttagagaggatgatttagttgctcatttaaatatcaacagtagtttttattaacaagacaattatcaaacaa 42299752  T
Q  107 aataatatgatataccaacataaa 130  Q
    ||||| |||  ||| |||||||||    
T  42299753 aataacatggcatatcaacataaa 42299776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 8 - 130
Target Start/End: Original strand, 44317396 - 44317519
Alignment:
Q  8 tccaagaatatattcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagttttta-taacacggtaattatcaaacaa 106  Q
    ||||| |||| | ||||||| |||||||||||||  | | ||||||||| ||||||||||||||||  ||||||||| ||||| |  |||||||||||||    
T  44317396 tccaacaataaactcactttcacatttgttagacaaaattatttagttgatcctttaaatatcaatcgtagtttttattaacatgacaattatcaaacaa 44317495  T
Q  107 aataatatgatataccaacataaa 130  Q
    ||||| || | ||| |||||||||    
T  44317496 aataacataacatatcaacataaa 44317519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 8 - 130
Target Start/End: Complemental strand, 4766546 - 4766422
Alignment:
Q  8 tccaagaatatattcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagttttt--ataacacggtaattatcaaaca 105  Q
    ||||| ||||| || ||||||||||||||||||   | ||||||||||  ||||||||||||||||| ||||||||   ||||| |  |||||||||| |    
T  4766546 tccaacaatatgtttactttaacatttgttagaggtaatgatttagtttatcctttaaatatcaatgatagttttttattaacatgacaattatcaaata 4766447  T
Q  106 aaataatatgatataccaacataaa 130  Q
    |||||| || | ||| |||||||||    
T  4766446 aaataacataacatatcaacataaa 4766422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 20 - 85
Target Start/End: Complemental strand, 53906502 - 53906437
Alignment:
Q  20 ttcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagtttttat 85  Q
    |||||||||||||||||||||  || ||||||||||| ||| ||||||||||||  ||||||||||    
T  53906502 ttcactttaacatttgttagaaggaatgatttagttgatccattaaatatcaatagtagtttttat 53906437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 51 - 164
Target Start/End: Complemental strand, 13015446 - 13015327
Alignment:
Q  51 tagttgttcctttaaatatcaatgttagtttttataacacggtaat------tatcaaacaaaataatatgatataccaacataaaataaatttctgcat 144  Q
    |||||| ||||||||||||||||| |||||||||||||| |  |||      ||||||||||||||| |||| ||| ||||||||||||| ||| | |||    
T  13015446 tagttgctcctttaaatatcaatggtagtttttataacatgaaaatgaaaattatcaaacaaaataacatgacatatcaacataaaataattttttacat 13015347  T
Q  145 tcaggatgagtttgagtatg 164  Q
    ||  || | |||||||||||    
T  13015346 tcgagacgggtttgagtatg 13015327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 51 - 130
Target Start/End: Complemental strand, 55826814 - 55826734
Alignment:
Q  51 tagttgttcctttaaatatcaatgttagttttta-taacacggtaattatcaaacaaaataatatgatataccaacataaa 130  Q
    |||||| ||||||||||||||||| ||||||||| ||||  |  |||||||||||||||||| || | ||| |||||||||    
T  55826814 tagttgatcctttaaatatcaatggtagtttttattaacgtgacaattatcaaacaaaataacataacatatcaacataaa 55826734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 225 - 304
Target Start/End: Complemental strand, 6482032 - 6481953
Alignment:
Q  225 ccaaactcaatcaaaatggagaaaatccgtcaaattaaatttgattcggacgtataaccaaatgtataggttttgctgcc 304  Q
    |||||| |||||||||  |||||||||||||||||| | ||||||||||  | |||||||   |||||||||||| ||||    
T  6482032 ccaaacccaatcaaaacagagaaaatccgtcaaattgagtttgattcgggtggataaccacgggtataggttttgttgcc 6481953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 8 - 63
Target Start/End: Complemental strand, 13015605 - 13015550
Alignment:
Q  8 tccaagaatatattcactttaacatttgttagaccgattgatttagttgttccttt 63  Q
    ||||| ||||| ||||||||||||| ||||||||||| | ||||||||| ||||||    
T  13015605 tccaataatatgttcactttaacatctgttagaccgaataatttagttgctccttt 13015550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 152 - 224
Target Start/End: Complemental strand, 1866637 - 1866565
Alignment:
Q  152 gagtttgagtatgagttcgggttagatacctatatatacattacccgtctcttactcgtgttttgaaatcggg 224  Q
    ||||||| ||||| ||||||| | ||||| |||||   ||||||||||||| ||| ||| |||||||||||||    
T  1866637 gagtttgggtatgggttcggggtggatacatatatccgcattacccgtctcgtacccgtattttgaaatcggg 1866565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 92; Significance: 2e-44; HSPs: 27)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 8 - 224
Target Start/End: Original strand, 1012474 - 1012691
Alignment:
Q  8 tccaagaatatattcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagtttttataacacggtaattatcaaacaaa 107  Q
    ||||| ||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||||||||| | ||||||||||||||    
T  1012474 tccaacaatatgttcactttaacatttgttagaccgattgatttagttgctcctttaaatatcaatggtactttttataacacagcaattatcaaacaaa 1012573  T
Q  108 ataatatgatataccaacataaaata--aatttctgcattcaggatgagtttgagtatgagttcgggttagatacctatatatacattacccgtctctta 205  Q
    |||| |||  ||| ||||||||| ||    ||| ||||||| ||| ||||||| ||||| ||||||| | | ||||||||||  ||||||||||| | ||    
T  1012574 ataacatggcatatcaacataaagtagttttttttgcattcgggacgagtttgggtatgggttcggggtgggtacctatatacccattacccgtcccata 1012673  T
Q  206 ctcgtgttttgaaatcggg 224  Q
    ||| |||||| ||||||||    
T  1012674 ctcatgtttt-aaatcggg 1012691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 21 - 223
Target Start/End: Original strand, 20399461 - 20399664
Alignment:
Q  21 tcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagtttttataacacggtaattat-caaacaaaataatatgatat 119  Q
    ||||||||||||||||||||||||||||||| |||| ||||||||||||||||| ||||||||||||||||  ||||||  ||| ||||||| ||| |||    
T  20399461 tcactttaacatttgttagaccgattgatttggttggtcctttaaatatcaatgctagtttttataacacgacaattatataaaaaaaataacatggtat 20399560  T
Q  120 accaacataaaataaatttctgcattcaggatgagtttgagtatgagttcgggttagatacctatatatacattacccgtctcttactcgtgttttgaaa 219  Q
    | ||||||||||||| ||| ||||||| ||| | ||||| | ||| ||||||| | | || |||||||  | ||||||||| | ||| ||||||||||||    
T  20399561 atcaacataaaataattttttgcattcgggacgggtttgggaatgggttcggggtgggtatctatatacccgttacccgtcccatacccgtgttttgaaa 20399660  T
Q  220 tcgg 223  Q
    ||||    
T  20399661 tcgg 20399664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 16 - 224
Target Start/End: Complemental strand, 43113849 - 43113641
Alignment:
Q  16 tatattcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagtttttataacacggtaattatcaaacaaaataatatg 115  Q
    ||||||||||||||||||||||| ||||||||||||||||| ||||| ||||||||||| ||||||||||||||||  ||||||| |||||||||| ||     
T  43113849 tatattcactttaacatttgttataccgattgatttagttgctccttcaaatatcaatgatagtttttataacacgacaattatctaacaaaataacata 43113750  T
Q  116 atataccaacataaaataaatttctgcattcaggatgagtttgagtatgagttcgggttagatacctatatatacattacccgtctcttactcgtgtttt 215  Q
    | ||| |||||| || ||  |||||||||||  || |  |||| ||||||||||||| | | ||||||||||    ||||||||| | | | ||||||||    
T  43113749 acatatcaacatgaagtagttttctgcattcgagacggatttgggtatgagttcggggtgggtacctatatacctgttacccgtcccatgcccgtgtttt 43113650  T
Q  216 gaaatcggg 224  Q
    |||||||||    
T  43113649 gaaatcggg 43113641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 8 - 260
Target Start/End: Original strand, 17469112 - 17469370
Alignment:
Q  8 tccaagaatatattcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagtttttataacacggtaattatcaaacaaa 107  Q
    ||||| ||||| |||||||||| |||| ||||||| ||||||||||||  ||||||||||||||||| ||| |||||||||| || ||||||||||||||    
T  17469112 tccaacaatatgttcactttaaaattttttagacccattgatttagtttctcctttaaatatcaatggtagcttttataacaaggcaattatcaaacaaa 17469211  T
Q  108 ataatatgatataccaacataaaataaatttctgcattcaggatgagtttgagtatgagttcgggttagatacctatatatacattacccgtctcttact 207  Q
    |||| |||  ||| ||||||||| ||  |||||||| |  ||| | ||||| ||||| ||| ||| | | ||||||||||  | ||||||||| | |||     
T  17469212 ataacatggcatatcaacataaagtagttttctgcagttgggacgggtttgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacc 17469311  T
Q  208 cgtgttttgaaatcggg------ccaaactcaatcaaaatggagaaaatccgtcaaatt 260  Q
    |||||||||||||||||      |||||| || |||||| || ||||||||||||||||    
T  17469312 cgtgttttgaaatcggggaaaacccaaacccagtcaaaacggggaaaatccgtcaaatt 17469370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 8 - 187
Target Start/End: Original strand, 24568796 - 24568974
Alignment:
Q  8 tccaagaatatattcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagtttttataacacggtaattatcaaacaaa 107  Q
    ||||| ||||| ||||||||||||||||||||||||||| ||||||||| ||||||||||||||||  |||||||||||||||   ||||||||||||||    
T  24568796 tccaacaatatgttcactttaacatttgttagaccgatttatttagttgctcctttaaatatcaatagtagtttttataacacatcaattatcaaacaaa 24568895  T
Q  108 ataatatgatataccaacataaaataaatttctgcattcaggatgagtttgagtatgagttcgggttagatacctatata 187  Q
    ||||  ||| ||| ||||||||| ||  ||||| ||||| ||| |  |||||||||| ||||||| | ||||||||||||    
T  24568896 ataa-ctgacatatcaacataaagtagttttctccattcgggacggatttgagtatgggttcggggtggatacctatata 24568974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 8 - 221
Target Start/End: Original strand, 45235921 - 45236135
Alignment:
Q  8 tccaagaatatattcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagttttta-taacacggtaattatcaaacaa 106  Q
    ||||| ||||| |||||||||||||||||||||| || ||||||||||| ||||||||||||||||| ||||||||| ||||| | ||||||||||||||    
T  45235921 tccaacaatatgttcactttaacatttgttagacggaatgatttagttgatcctttaaatatcaatggtagtttttattaacatgataattatcaaacaa 45236020  T
Q  107 aataatatgatataccaacataaaataaatttctgcattcaggatgagtttgagtatgagttcgggttagatacctatatatacattacccgtctcttac 206  Q
    ||||| || | ||| ||||||||| ||| ||| | ||||  ||| | || ||  |||| ||||||| | | ||||||||||  ||||||||||| | |||    
T  45236021 aataacataacatatcaacataaattaattttttacatttgggacgggtatggatatgggttcggggtgggtacctatatacccattacccgtcccatac 45236120  T
Q  207 tcgtgttttgaaatc 221  Q
     ||||||||||||||    
T  45236121 ccgtgttttgaaatc 45236135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 25 - 234
Target Start/End: Complemental strand, 36132130 - 36131922
Alignment:
Q  25 tttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagtttttataacacggtaattatcaaacaaaataatatgatataccaa 124  Q
    ||||||||||||| |||||||| ||||| ||| | |||||||| | |||| || |||||||||||||| |||||||||||||||||| |||| |||  ||    
T  36132130 tttaacatttgtttgaccgattaatttaattgcttctttaaattttaatggtaatttttataacacggcaattatcaaacaaaataacatgacata-taa 36132032  T
Q  125 cataaaataaatttctgcattcaggatgagtttgagtatgagttcgggttagatacctatatatacattacccgtctcttactcgtgttttgaaatcggg 224  Q
    |||||||||| ||||||||||| ||| |  |||| ||||||||||||| | ||||||| |||   | |||||| || | ||||||||||||||||| |||    
T  36132031 cataaaataactttctgcattcgggacggatttgtgtatgagttcggggtggatacctgtatgccctttacccatcccatactcgtgttttgaaataggg 36131932  T
Q  225 ccaaactcaa 234  Q
      ||||||||    
T  36131931 gaaaactcaa 36131922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 8 - 187
Target Start/End: Original strand, 34139304 - 34139483
Alignment:
Q  8 tccaagaatatattcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagtttttataacacggtaattatcaaacaaa 107  Q
    ||||| ||||| ||||||||||||||||||||||||||||||||  ||  ||||||||||||||||| ||||||||||||||||  ||||||||||||||    
T  34139304 tccaacaatatgttcactttaacatttgttagaccgattgatttgtttactcctttaaatatcaatggtagtttttataacacgacaattatcaaacaaa 34139403  T
Q  108 ataatatgatataccaacataaaataa-atttctgcattcaggatgagtttgagtatgagttcgggttagatacctatata 187  Q
    |||| ||| | || ||||||||| |||  ||| ||||||| ||| | ||||| ||||| ||||||| | | ||||||||||    
T  34139404 ataacatggtctatcaacataaagtaatttttttgcattcgggacgggtttgggtatg-gttcggggtgggtacctatata 34139483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 14 - 111
Target Start/End: Original strand, 35215367 - 35215464
Alignment:
Q  14 aatatattcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagtttttataacacggtaattatcaaacaaaataa 111  Q
    ||||| ||||||||||||||||||||||||||||||||||||| ||| ||||||||||| | ||||||||||||||||  ||||||||||||||||||    
T  35215367 aatatgttcactttaacatttgttagaccgattgatttagttgctccattaaatatcaagggtagtttttataacacgacaattatcaaacaaaataa 35215464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 21 - 224
Target Start/End: Original strand, 27932282 - 27932486
Alignment:
Q  21 tcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagttttta-taacacggtaattatcaaacaaaataatatgatat 119  Q
    |||||||||||||||||||||  | ||||||| ||| ||||||||||||||||| ||||||||| ||||| |  |||||||||||||||||| |||| ||    
T  27932282 tcactttaacatttgttagacgtaatgatttaattgatcctttaaatatcaatgatagtttttattaacatgacaattatcaaacaaaataacatgacat 27932381  T
Q  120 accaacataaaataaatttctgcattcaggatgagtttgagtatgagttcgggttagatacctatatatacattacccgtctcttactcgtgttttgaaa 219  Q
    | ||||||||||||| ||| | ||||  ||| |  | |||||||| ||||||| | | ||||||||||  | |||| |||| | ||| ||||||||||||    
T  27932382 atcaacataaaataattttttacatttgggacggatatgagtatgggttcggggtgggtacctatatacccgttactcgtcccatacccgtgttttgaaa 27932481  T
Q  220 tcggg 224  Q
    |||||    
T  27932482 tcggg 27932486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 21 - 233
Target Start/End: Complemental strand, 24870242 - 24870030
Alignment:
Q  21 tcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagtttttataacacggtaattatcaaacaaaataatatgatata 120  Q
    ||||||||||||||||||||| || ||||||||||| ||||||||||||||||| |||||||  ||||| |  |||||||||||||| ||| |||| |||    
T  24870242 tcactttaacatttgttagacggaatgatttagttgatcctttaaatatcaatggtagttttattaacatgacaattatcaaacaaattaacatgacata 24870143  T
Q  121 ccaacataaaataaatttctgcattcaggatgagtttgagtatgagttcgggttagatacctatatatacattacccgtctcttactcgtgttttgaaat 220  Q
     ||||||||| ||| ||| | ||||  ||| | ||||  ||||| | ||||| | | ||||||||||  | ||||||||| | ||| |||||||| ||||    
T  24870142 tcaacataaagtaattttttacatttgggacgggtttaggtatgggctcggggtgggtacctatatacccgttacccgtcacatacccgtgttttaaaat 24870043  T
Q  221 cgggccaaactca 233  Q
    ||||  |||||||    
T  24870042 cggggaaaactca 24870030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 20 - 224
Target Start/End: Original strand, 1063375 - 1063580
Alignment:
Q  20 ttcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagtttttat-aacacggtaattatcaaacaaaataatatgata 118  Q
    |||||||||||||||||||||| || ||||||||||| || |||||||||||||| || ||||||| |||| |  |||||||||||||||||| | || |    
T  1063375 ttcactttaacatttgttagacggaatgatttagttgatcgtttaaatatcaatggtaatttttatcaacatgacaattatcaaacaaaataacaagaca 1063474  T
Q  119 taccaacataaaataaatttctgcattcaggatgagtttgagtatgagttcgggttagatacctatatatacattacccgtctcttactcgtgttttgaa 218  Q
    || ||||||||| ||| ||| | || |  |||||  |||| ||||||||||||| | | ||| ||||||  | ||| ||||| | ||| |||||||||||    
T  1063475 tatcaacataaagtaattttttacacttgggatggatttgggtatgagttcggggtgggtacttatatacccgttaaccgtcccatacccgtgttttgaa 1063574  T
Q  219 atcggg 224  Q
    ||||||    
T  1063575 atcggg 1063580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 8 - 128
Target Start/End: Original strand, 29089567 - 29089685
Alignment:
Q  8 tccaagaatatattcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagtttttataacacggtaattatcaaacaaa 107  Q
    ||||| ||||| || ||||||| |||||||||||| ||| ||||||||| ||||||||||||||||| ||||||| |||||||  |||||||||||||||    
T  29089567 tccaacaatatgtttactttaa-atttgttagacccattaatttagttgctcctttaaatatcaatgatagttttaataacacaataattatcaaacaaa 29089665  T
Q  108 ataatatgatataccaacata 128  Q
    |||| || | |||||||||||    
T  29089666 ataacat-acataccaacata 29089685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 21 - 224
Target Start/End: Complemental strand, 29109041 - 29108837
Alignment:
Q  21 tcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagttttta-taacacggtaattatcaaacaaaataatatgatat 119  Q
    |||||||||||||||||||||  | ||||||| ||| ||||| ||||||||||| ||||||||| ||||| |  ||||||||||||||||||||||| ||    
T  29109041 tcactttaacatttgttagacgtaatgatttaattgatccttcaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataatatgacat 29108942  T
Q  120 accaacataaaataaatttctgcattcaggatgagtttgagtatgagttcgggttagatacctatatatacattacccgtctcttactcgtgttttgaaa 219  Q
    | ||||||||| ||| ||| | ||||  ||| | || || ||||| ||||||| | | ||| ||||||  | ||||||||| | ||| | |||||| |||    
T  29108941 atcaacataaagtaattttttacatttgggacgggtatgggtatgggttcggggtgggtacatatatacccgttacccgtcccatacccatgttttaaaa 29108842  T
Q  220 tcggg 224  Q
    |||||    
T  29108841 tcggg 29108837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 21 - 130
Target Start/End: Complemental strand, 2076053 - 2075943
Alignment:
Q  21 tcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagttttta-taacacggtaattatcaaacaaaataatatgatat 119  Q
    ||||||| |||||||||||||  | ||||||||||| ||||||||||||||||| ||||||||| ||||| |  |||||||||||||||||| || | ||    
T  2076053 tcactttcacatttgttagacaaaatgatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataacataacat 2075954  T
Q  120 accaacataaa 130  Q
    | |||||||||    
T  2075953 atcaacataaa 2075943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 21 - 130
Target Start/End: Complemental strand, 4230938 - 4230828
Alignment:
Q  21 tcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagttttta-taacacggtaattatcaaacaaaataatatgatat 119  Q
    ||||||| |||||||||||||  | ||||||||||| ||||||||||||||||| ||||||||| ||||| |  |||||||||||||||||| || || |    
T  4230938 tcacttttacatttgttagacaaaatgatttagttgatcctttaaatatcaatgatagtttttattaacatgacaattatcaaacaaaataacataatgt 4230839  T
Q  120 accaacataaa 130  Q
    | |||||||||    
T  4230838 atcaacataaa 4230828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 32 - 222
Target Start/End: Original strand, 14186205 - 14186391
Alignment:
Q  32 tttgttagaccgattgatttagttgttcctttaaatatcaatgttagtttttataacacggtaattatcaaacaaaataatatgatataccaacataaaa 131  Q
    ||||||||||| ||||||||||||  ||||||||||||||||| ||||||    ||||||    |||||||||||||||| |||  |||  ||||||||     
T  14186205 tttgttagaccaattgatttagttactcctttaaatatcaatggtagttt----aacacgactgttatcaaacaaaataacatggcatattaacataaat 14186300  T
Q  132 taaatttctgcattcaggatgagtttgagtatgagttc-gggttagatacctatatatacattacccgtctcttactcgtgttttgaaatcg 222  Q
    ||| ||||| ||||||||| | ||||| ||||| |||| |||| || ||||||||||| | |||||| || | ||| |||||||||||||||    
T  14186301 taattttctacattcaggacgggtttgggtatgggttcagggtgag-tacctatatatccgttacccatcccatacccgtgttttgaaatcg 14186391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 21 - 130
Target Start/End: Original strand, 17220586 - 17220696
Alignment:
Q  21 tcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagttttta-taacacggtaattatcaaacaaaataatatgatat 119  Q
    |||||||||||||||||||||  | ||||||| ||| ||||| ||||||||||| ||||||||| ||||| |  |||||||||||||||||| |||| ||    
T  17220586 tcactttaacatttgttagacgtaatgatttaattgatccttcaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataacatgacat 17220685  T
Q  120 accaacataaa 130  Q
    | |||||||||    
T  17220686 atcaacataaa 17220696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 31 - 172
Target Start/End: Original strand, 34776945 - 34777087
Alignment:
Q  31 atttgttagaccgattgatttagttgttcctttaaatatcaatgttagttttta-taacacggtaattatcaaacaaaataatatgatataccaacataa 129  Q
    |||||||||||  | ||||||||||| ||||||||||||||||| ||||||||| |||||  | |||||||||||||||||| || | ||| ||||||||    
T  34776945 atttgttagacaaaatgatttagttgatcctttaaatatcaatggtagtttttattaacattgcaattatcaaacaaaataacataacatatcaacataa 34777044  T
Q  130 aataaatttctgcattcaggatgagtttgagtatgagttcggg 172  Q
    ||||| ||| | ||||  |||||  |||| ||||| |||||||    
T  34777045 aataattttttacatttgggatggatttgggtatgggttcggg 34777087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 21 - 133
Target Start/End: Original strand, 32302929 - 32303042
Alignment:
Q  21 tcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagttttta-taacacggtaattatcaaacaaaataatatgatat 119  Q
    ||||||| |||||||||||||  | | ||||||||| ||||||||||||||||| ||||||||| ||||| |  |||||||||||||||||| || | ||    
T  32302929 tcactttcacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataacataacat 32303028  T
Q  120 accaacataaaata 133  Q
    | ||||||||||||    
T  32303029 atcaacataaaata 32303042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 8 - 85
Target Start/End: Complemental strand, 40248579 - 40248502
Alignment:
Q  8 tccaagaatatattcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagtttttat 85  Q
    ||||| |||||  ||||||||||||||||||||| || ||||||||||| ||||||||||||||||| ||||||||||    
T  40248579 tccaacaatattctcactttaacatttgttagactgaatgatttagttgatcctttaaatatcaatggtagtttttat 40248502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 21 - 155
Target Start/End: Original strand, 34021348 - 34021480
Alignment:
Q  21 tcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagtttttataacacggtaattatcaaacaaaataatatgatata 120  Q
    ||||||||||||||||||||   |||||||| |||| ||||||||||||||||  |||||||||||  | |  |||||||||||||||||| || | |||    
T  34021348 tcactttaacatttgttagattaattgatttcgttgctcctttaaatatcaatagtagtttttatataatgacaattatcaaacaaaataacat-acata 34021446  T
Q  121 ccaacataaaataaatttctgcattcaggatgagt 155  Q
     |||||| |||| | ||||||||||||||| ||||    
T  34021447 tcaacat-aaatgattttctgcattcaggacgagt 34021480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 22 - 214
Target Start/End: Original strand, 24927819 - 24928012
Alignment:
Q  22 cactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagttttta-taacacggtaattatcaaacaaaataatatgatata 120  Q
    |||||| |||||||||||||  | | ||||||||| ||||||||||||||||| ||||||||| ||| | |  |||||||||||||||||| || | |||    
T  24927819 cactttcacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaagatgacaattatcaaacaaaataacataacata 24927918  T
Q  121 ccaacataaaataaatttctgcattcaggatgagtttgagtatgagttcgggttagatacctatatatacattacccgtctcttactcgtgttt 214  Q
     | ||||||| ||  ||| | ||||  ||| | ||||| ||||| ||||||| | | ||||||||||  | ||||||||||| ||| |||||||    
T  24927919 tccacataaagtagttttttacatttgggacgggtttgggtatgggttcggggtgggtacctatatacccgttacccgtctcatacccgtgttt 24928012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 20 - 130
Target Start/End: Complemental strand, 28977334 - 28977223
Alignment:
Q  20 ttcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagttttta-taacacggtaattatcaaacaaaataatatgata 118  Q
    |||||||| |||||||||||||  | | ||||||||| || |||||||||||||| ||||||||| ||||| |  |||||||||||||||||| || | |    
T  28977334 ttcactttcacatttgttagacaaaattatttagttgatcatttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataacataaca 28977235  T
Q  119 taccaacataaa 130  Q
    || |||||||||    
T  28977234 tatcaacataaa 28977223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 8 - 116
Target Start/End: Complemental strand, 39445799 - 39445691
Alignment:
Q  8 tccaagaatatattcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagttttta-taacacggtaattatcaaacaa 106  Q
    ||||| |||||  ||||||||||||||||||||| || ||||||| ||| | | ||||||||||||| ||||||||| ||||| |  |||||||||||||    
T  39445799 tccaacaatatgctcactttaacatttgttagacggaatgatttaattgat-cattaaatatcaatggtagtttttattaacatgacaattatcaaacaa 39445701  T
Q  107 aataatatga 116  Q
    ||||| ||||    
T  39445700 aataacatga 39445691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 8 - 67
Target Start/End: Complemental strand, 11255236 - 11255177
Alignment:
Q  8 tccaagaatatattcactttaacatttgttagaccgattgatttagttgttcctttaaat 67  Q
    ||||| ||||| |||||||||||||||||||||| || ||||||||||| ||||||||||    
T  11255236 tccaacaatatgttcactttaacatttgttagacggaatgatttagttgatcctttaaat 11255177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 21 - 85
Target Start/End: Original strand, 31325134 - 31325197
Alignment:
Q  21 tcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagtttttat 85  Q
    ||||||| |||||||||||||  | ||||||||||| || |||||||||||||| ||||||||||    
T  31325134 tcactttcacatttgttagacaaaatgatttagttgatc-tttaaatatcaatggtagtttttat 31325197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 92; Significance: 2e-44; HSPs: 26)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 21 - 260
Target Start/End: Complemental strand, 6028108 - 6027862
Alignment:
Q  21 tcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttag-tttttataacacggtaattatcaaacaaaataatatgatat 119  Q
    |||||||||||||||||||||| ||||||||||||| ||||||||||||||||| ||| |||||||||||||  |||||||||||||||||| |||   |    
T  6028108 tcactttaacatttgttagaccaattgatttagttgctcctttaaatatcaatgatagttttttataacacgacaattatcaaacaaaataacatggctt 6028009  T
Q  120 accaacataaaataaatttctgcattcaggatgagtttgagtatgagttcgggttagatacctatatatacattacccgtctcttactcgtgttttgaaa 219  Q
    | ||||||||||||  ||||||||||||||| | || |||||||| ||||||| | | ||||||||||    ||||||||||| ||| | |||||| |||    
T  6028008 atcaacataaaatacttttctgcattcaggacgggtatgagtatgggttcggggtgggtacctatatacctgttacccgtctcatacccatgttttaaaa 6027909  T
Q  220 tcggg------ccaaactcaatcaaaatggagaaaatccgtcaaatt 260  Q
    |||||      |||||| ||||||||| || ||||| ||||||||||    
T  6027908 tcggggaaaacccaaacccaatcaaaacggggaaaacccgtcaaatt 6027862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 8 - 145
Target Start/End: Complemental strand, 31942417 - 31942280
Alignment:
Q  8 tccaagaatatattcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagtttttataacacggtaattatcaaacaaa 107  Q
    ||||| ||||| ||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||  ||||||||||||||    
T  31942417 tccaacaatatgttcactttaacatttgttagaccgactgatttagttgctcctttaaatatcaatggtagtttttataacacgacaattatcaaacaaa 31942318  T
Q  108 ataatatgatataccaacataaaataaatttctgcatt 145  Q
    |||| |||  ||| || |||||| ||  ||||||||||    
T  31942317 ataacatggcatatcagcataaagtagttttctgcatt 31942280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 21 - 187
Target Start/End: Complemental strand, 19105059 - 19104893
Alignment:
Q  21 tcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagtttttataacacggtaattatcaaacaaaataatatgatata 120  Q
    ||||||||||||||||||||||||| |||||||||| || |||||||||| ||  ||||||||||||||||| |||||| ||||||||||| |||| |      
T  19105059 tcactttaacatttgttagaccgatcgatttagttgctcttttaaatatcgatagtagtttttataacacggcaattattaaacaaaataacatgacacg 19104960  T
Q  121 ccaacataaaataaatttctgcattcaggatgagtttgagtatgagttcgggttagatacctatata 187  Q
     ||||||||| ||| ||||||||||| ||| | |||||||||||  |||| | | ||||||||||||    
T  19104959 tcaacataaagtaattttctgcattcgggacgggtttgagtatggattcgaggtggatacctatata 19104893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 21 - 233
Target Start/End: Complemental strand, 13705580 - 13705367
Alignment:
Q  21 tcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagttttta-taacacggtaattatcaaacaaaataatatgatat 119  Q
    |||||||||||||||||| || || ||||||||||| ||||||||||||||||| ||||||||| ||||| |  |||||||||||||||||| |||| ||    
T  13705580 tcactttaacatttgttatacggaatgatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataacatgacat 13705481  T
Q  120 accaacataaaataaatttctgcattcaggatgagtttgagtatgagttcgggttagatacctatatatacattacccgtctcttactcgtgttttgaaa 219  Q
    | ||||||||| ||| |||   ||||  ||| | ||||  ||||| ||||||| | | ||||||||||  | ||||| ||||| ||| ||||||||||||    
T  13705480 atcaacataaagtaatttttcacatttgggacgggtttaggtatgggttcggggtgggtacctatatacccgttacctgtctcatacccgtgttttgaaa 13705381  T
Q  220 tcgggccaaactca 233  Q
    |||||  |||||||    
T  13705380 tcggggaaaactca 13705367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 22 - 224
Target Start/End: Complemental strand, 7314866 - 7314663
Alignment:
Q  22 cactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagttttta-taacacggtaattatcaaacaaaataatatgatata 120  Q
    |||||||||||||| ||||| || ||||||||||| ||||||||||||||||| ||||||||| ||||| | || |||||||||||||||| |||| |||    
T  7314866 cactttaacatttgatagacggaatgatttagttgatcctttaaatatcaatgatagtttttattaacatgatatttatcaaacaaaataacatgacata 7314767  T
Q  121 ccaacataaaataaatttctgcattcaggatgagtttgagtatgagttcgggttagatacctatatatacattacccgtctcttactcgtgttttgaaat 220  Q
     ||||||||||||| ||| | ||||  ||| | || || ||||| ||||||| | |  |||||||||  | ||||||||| | ||||||| |||| ||||    
T  7314766 tcaacataaaataattttttacatttgggacgggtgtgggtatgggttcggggtgggaacctatatacccgttacccgtcccatactcgtattttaaaat 7314667  T
Q  221 cggg 224  Q
    ||||    
T  7314666 cggg 7314663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 8 - 130
Target Start/End: Complemental strand, 12194059 - 12193936
Alignment:
Q  8 tccaagaatatattcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagttttta-taacacggtaattatcaaacaa 106  Q
    ||||| ||||| |||||||||||||||||||||| || |||| |||||| ||||||||||||||||| ||||||||| ||||| | ||||||||||||||    
T  12194059 tccaacaatatgttcactttaacatttgttagacggaatgatgtagttgatcctttaaatatcaatggtagtttttattaacatgataattatcaaacaa 12193960  T
Q  107 aataatatgatataccaacataaa 130  Q
    ||||| |||| ||| |||||||||    
T  12193959 aataacatgacatatcaacataaa 12193936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 21 - 224
Target Start/End: Original strand, 14540656 - 14540855
Alignment:
Q  21 tcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagtttttataacacggtaattatcaaacaaaataatatgatata 120  Q
    ||||||||||||||||||||| |||||||||||||| |||||||||||||     ||||||||||||||||  |||||||||||||||||| |||| |||    
T  14540656 tcactttaacatttgttagactgattgatttagttgctcctttaaatatc----gtagtttttataacacgacaattatcaaacaaaataacatgacata 14540751  T
Q  121 ccaacataaaataaatttctgcattcaggatgagtttgagtatgagttcgggttagatacctatatatacattacccgtctcttactcgtgttttgaaat 220  Q
     ||||||||| ||| ||||| | ||| ||| |  ||||||||||  ||| |  | | | ||||||||  | ||||| ||||| ||| |||||||||||||    
T  14540752 tcaacataaagtaattttctacgttcgggacggatttgagtatggattccgagtgggtgcctatatacccgttacctgtctcatacccgtgttttgaaat 14540851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 20 - 233
Target Start/End: Original strand, 45256692 - 45256906
Alignment:
Q  20 ttcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagttttta-taacacggtaattatcaaacaaaataatatgata 118  Q
    |||||||||||||||||||||| || ||||||||||| ||||||||||||||||| || |||||| ||||| |  |||||||||||||||||| | || |    
T  45256692 ttcactttaacatttgttagacggaatgatttagttgatcctttaaatatcaatggtaatttttattaacatgacaattatcaaacaaaataacaagaca 45256791  T
Q  119 taccaacataaaataaatttctgcattcaggatgagtttgagtatgagttcgggttagatacctatatatacattacccgtctcttactcgtgttttgaa 218  Q
    || ||| ||||| ||| ||| | ||||  ||| | ||||  ||||| ||||||| | | ||| ||||||  ||||| ||||||| ||| |||||||||||    
T  45256792 tatcaaaataaagtaattttttacatttgggacgggtttaggtatgggttcggggtgggtacttatatacccattaaccgtctcatacccgtgttttgaa 45256891  T
Q  219 atcgggccaaactca 233  Q
    ||||||  |||||||    
T  45256892 atcggggaaaactca 45256906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 8 - 215
Target Start/End: Complemental strand, 10208662 - 10208454
Alignment:
Q  8 tccaagaatatattcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagttttta-taacacggtaattatcaaacaa 106  Q
    ||||| |||| | ||||||| |||||||| ||||  | ||||||||||| ||||||||||||||||| ||||||||| ||||| |  |||||||||||||    
T  10208662 tccaacaataaactcactttcacatttgtaagacaaaatgatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaa 10208563  T
Q  107 aataatatgatataccaacataaaataaatttctgcattcaggatgagtttgagtatgagttcgggttagatacctatatatacattacccgtctcttac 206  Q
    ||||| || | |||  |||||||| ||| ||| | ||||  |||   ||||||||||| ||||||| ||| ||||||||||| ||||||||||| | |||    
T  10208562 aataacataacatattaacataaagtaattttttacatttgggactggtttgagtatgggttcggggtaggtacctatatatccattacccgtcccatac 10208463  T
Q  207 tcgtgtttt 215  Q
     ||||||||    
T  10208462 ccgtgtttt 10208454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 8 - 116
Target Start/End: Complemental strand, 16226958 - 16226850
Alignment:
Q  8 tccaagaatatattcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagtttttataacacggtaattatcaaacaaa 107  Q
    ||||| ||||||||||||||||||||| ||||||| ||||||||||||| |  |||||||||||||| ||||||||||||||||  |||||||||| |||    
T  16226958 tccaacaatatattcactttaacatttcttagaccaattgatttagttgctaatttaaatatcaatggtagtttttataacacgacaattatcaaataaa 16226859  T
Q  108 ataatatga 116  Q
    |||| ||||    
T  16226858 ataacatga 16226850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 21 - 224
Target Start/End: Original strand, 37999353 - 37999557
Alignment:
Q  21 tcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagtttttat-aacacggtaattatcaaacaaaataatatgatat 119  Q
    ||||||| |||||||||||||  | ||||||||||| | ||||||||||||||| |||||||||| |||| |  |||||||||||||||||| || | ||    
T  37999353 tcactttcacatttgttagacaaaatgatttagttgattctttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataacataacat 37999452  T
Q  120 accaacataaaataaatttctgcattcaggatgagtttgagtatgagttcgggttagatacctatatatacattacccgtctcttactcgtgttttgaaa 219  Q
    | ||||||||| ||| ||| | ||||  ||| | ||||| ||||||||||||| | | ||| ||||||  | ||||||||||| ||| |||||||||| |    
T  37999453 atcaacataaagtaattttttacatttgggacgggtttgggtatgagttcggggtgggtacttatatacccgttacccgtctcatacccgtgttttgaga 37999552  T
Q  220 tcggg 224  Q
    |||||    
T  37999553 tcggg 37999557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 21 - 222
Target Start/End: Original strand, 45115428 - 45115630
Alignment:
Q  21 tcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagttttta-taacacggtaattatcaaacaaaataatatgatat 119  Q
    |||||||||||||| ||||||  | ||||||| ||| ||||||||||||||||| ||||||||| ||||| |  |||||||||||||||||| |||| ||    
T  45115428 tcactttaacatttattagacaaaatgatttaattgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataacatgacat 45115527  T
Q  120 accaacataaaataaatttctgcattcaggatgagtttgagtatgagttcgggttagatacctatatatacattacccgtctcttactcgtgttttgaaa 219  Q
    | ||||||||  ||| ||| | ||||  ||||| |||| | |||| ||||||| | | ||||||||||    ||||||||||| ||| ||||||||||||    
T  45115528 atcaacataatgtaattttttacatttgggatgggtttaactatgggttcgggatgggtacctatatacctgttacccgtctcatacccgtgttttgaaa 45115627  T
Q  220 tcg 222  Q
    |||    
T  45115628 tcg 45115630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 8 - 130
Target Start/End: Original strand, 37106556 - 37106678
Alignment:
Q  8 tccaagaatatattcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagttttta-taacacggtaattatcaaacaa 106  Q
    ||||| |||||  ||||||||||||||||||||| || ||||||||||| ||||||||||||||||| ||||||||| ||||| |  |||||||||||||    
T  37106556 tccaacaatatgctcactttaacatttgttagacggaatgatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaa 37106655  T
Q  107 aataatatgatataccaacataaa 130  Q
    ||||| || ||||| |||||||||    
T  37106656 aataacat-atatatcaacataaa 37106678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 21 - 222
Target Start/End: Complemental strand, 8916156 - 8915954
Alignment:
Q  21 tcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagtttttat-aacacggtaattatcaaacaaaataatatgatat 119  Q
    ||||||| |||||||||||||  | | ||||||||  ||||||||||||||||| |||||||||| |||| |  |||||||||||||||||| || | ||    
T  8916156 tcactttcacatttgttagacaaaataatttagttaatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataacataacat 8916057  T
Q  120 accaacataaaataaatttctgcattcaggatgagtttgagtatgagttcgggttagatacctatatatacattacccgtctcttactcgtgttttgaaa 219  Q
    | ||||||||||||| ||| | ||||  ||| | ||||||||||| ||||||| | | ||||||||||    ||||||||| | ||| |||||||||| |    
T  8916056 atcaacataaaataattttttacatttgggacgggtttgagtatgggttcggggtgggtacctatatacctgttacccgtcccatacccgtgttttgaga 8915957  T
Q  220 tcg 222  Q
    |||    
T  8915956 tcg 8915954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 21 - 188
Target Start/End: Original strand, 10920515 - 10920683
Alignment:
Q  21 tcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagttttta-taacacggtaattatcaaacaaaataatatgatat 119  Q
    ||||||| |||||||||||||  | ||||||||||| ||||||||||||||||| ||||||||| ||||| |  |||||||||||||||||| || | ||    
T  10920515 tcactttcacatttgttagacaaaatgatttagttgatcctttaaatatcaatgatagtttttattaacatgacaattatcaaacaaaataacataacat 10920614  T
Q  120 accaacataaaataaatttctgcattcaggatgagtttgagtatgagttcgggttagatacctatatat 188  Q
    | ||||||||| ||| ||| | ||||  ||| |  |||| ||||| ||||||| | |||||||||||||    
T  10920615 atcaacataaagtaattttttacatttgggacggatttgggtatgggttcggggtggatacctatatat 10920683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 8 - 111
Target Start/End: Complemental strand, 37472961 - 37472857
Alignment:
Q  8 tccaagaatatattcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagttttta-taacacggtaattatcaaacaa 106  Q
    ||||| |||||  ||||||||||||||||||||| || ||||||||||| ||||||||||||||||| ||||||||| ||||| |  |||||||||||||    
T  37472961 tccaacaatatgctcactttaacatttgttagacagaatgatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaa 37472862  T
Q  107 aataa 111  Q
    |||||    
T  37472861 aataa 37472857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 21 - 224
Target Start/End: Original strand, 9632256 - 9632460
Alignment:
Q  21 tcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagttttta-taacacggtaattatcaaacaaaataatatgatat 119  Q
    ||||||| |||||||||||||  | | ||||||||| ||||||||||||||||| ||||||||| ||||| |  |||||| ||| ||||||| || | ||    
T  9632256 tcactttcacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattataaaaaaaaataacataacat 9632355  T
Q  120 accaacataaaataaatttctgcattcaggatgagtttgagtatgagttcgggttagatacctatatatacattacccgtctcttactcgtgttttgaaa 219  Q
    | ||||||||| ||  ||| | ||||  ||| | ||||| ||||| ||||||| | ||||||||||||  ||||||||||| | ||| ||||||| || |    
T  9632356 atcaacataaagtagttttttacatttgggacgggtttgggtatgggttcggggtggatacctatatacccattacccgtcccatacccgtgtttcgaga 9632455  T
Q  220 tcggg 224  Q
    |||||    
T  9632456 tcggg 9632460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 20 - 134
Target Start/End: Complemental strand, 18106310 - 18106195
Alignment:
Q  20 ttcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagttttta-taacacggtaattatcaaacaaaataatatgata 118  Q
    |||||||| |||||||||||||  | ||||||| ||| ||||||||||||||||| ||||||||| ||||| |  |||||||||||||||||| || ||     
T  18106310 ttcactttcacatttgttagacaaaatgatttaattgatcctttaaatatcaatgatagtttttattaacatgacaattatcaaacaaaataacataatg 18106211  T
Q  119 taccaacataaaataa 134  Q
    || |||||||||||||    
T  18106210 tatcaacataaaataa 18106195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 21 - 130
Target Start/End: Complemental strand, 42798208 - 42798098
Alignment:
Q  21 tcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagttttta-taacacggtaattatcaaacaaaataatatgatat 119  Q
    ||||||| |||||||||||||  | ||||||||||| ||||||||||||||||| ||||||||| ||||| |  |||||||||||||||||| || | ||    
T  42798208 tcactttcacatttgttagacaaaatgatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataacataacat 42798109  T
Q  120 accaacataaa 130  Q
    | |||||||||    
T  42798108 atcaacataaa 42798098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 21 - 172
Target Start/End: Original strand, 13830606 - 13830758
Alignment:
Q  21 tcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagttttta-taacacggtaattatcaaacaaaataatatgatat 119  Q
    ||||||| |||||||||||||  | ||||||||||| ||||||||||||||||| ||||||||| | ||| |  |||||||||||||||||| || | ||    
T  13830606 tcactttcacatttgttagacaaaatgatttagttgatcctttaaatatcaatggtagtttttatttacatgacaattatcaaacaaaataacataacat 13830705  T
Q  120 accaacataaaataaatttctgcattcaggatgagtttgagtatgagttcggg 172  Q
    | ||||||||| ||| ||| | ||||  |||   ||||||||||| |||||||    
T  13830706 atcaacataaagtaattttttacatttgggacaggtttgagtatgggttcggg 13830758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 21 - 224
Target Start/End: Complemental strand, 24414351 - 24414147
Alignment:
Q  21 tcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagttttta-taacacggtaattatcaaacaaaataatatgatat 119  Q
    ||||||| |||||||||||||  | | ||||||||| || |||||||||||||| ||||||||| ||||| |  |||||||||||||||||| || | ||    
T  24414351 tcactttcacatttgttagacaaaattatttagttgatcatttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataacataacat 24414252  T
Q  120 accaacataaaataaatttctgcattcaggatgagtttgagtatgagttcgggttagatacctatatatacattacccgtctcttactcgtgttttgaaa 219  Q
    | ||||||||| ||  ||| | ||||  ||| | ||||| ||||| ||||||| | | ||||||||||    ||||||||| | ||| |||||||||| |    
T  24414251 atcaacataaagtagttttttacatttgggacgggtttgggtatgggttcggggtgggtacctatatacctgttacccgtcccatacccgtgttttgaga 24414152  T
Q  220 tcggg 224  Q
    |||||    
T  24414151 tcggg 24414147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 20 - 130
Target Start/End: Complemental strand, 36128327 - 36128216
Alignment:
Q  20 ttcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagttttta-taacacggtaattatcaaacaaaataatatgata 118  Q
    |||||||| |||||||||||||  | | ||||||||| ||||||||||||||||| ||||||||| ||||| |  |||||||||||||||||| || | |    
T  36128327 ttcactttcacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataacataaca 36128228  T
Q  119 taccaacataaa 130  Q
    || |||||||||    
T  36128227 tatcaacataaa 36128216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 21 - 130
Target Start/End: Original strand, 30846815 - 30846925
Alignment:
Q  21 tcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagttttta-taacacggtaattatcaaacaaaataatatgatat 119  Q
    ||||||| |||||||||||||  | | ||||||||| ||||||||||||||||| ||||||||| ||||| |  |||||||||||||||||| || | ||    
T  30846815 tcactttcacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataacataacat 30846914  T
Q  120 accaacataaa 130  Q
    | |||||||||    
T  30846915 atcaacataaa 30846925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 8 - 224
Target Start/End: Complemental strand, 44746341 - 44746124
Alignment:
Q  8 tccaagaatatattcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagtttttataa-cacggtaattatcaaacaa 106  Q
    ||||| |||||  ||||| ||||||||||||||| || | ||||| ||| ||||||||||||||||| |||||||||||| ||    ||| |||||| ||    
T  44746341 tccaacaatatgctcactctaacatttgttagacggaataatttatttgctcctttaaatatcaatgatagtttttataaccattacaatgatcaaataa 44746242  T
Q  107 aataatatgatataccaacataaaataaatttctgcattcaggatgagtttgagtatgagttcgggttagatacctatatatacattacccgtctcttac 206  Q
    ||||| |||  ||| ||| ||||| | | ||||| ||||  ||| | ||||||||||||||| |   | | ||| ||||||  ||||||||||| | ||     
T  44746241 aataacatggcatatcaagataaagtgattttctacatttgggacgggtttgagtatgagtttgaagtgggtacatatatacccattacccgtcccatat 44746142  T
Q  207 tcgtgttttgaaatcggg 224  Q
    ||||||||||||||||||    
T  44746141 tcgtgttttgaaatcggg 44746124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 14 - 71
Target Start/End: Original strand, 37319805 - 37319862
Alignment:
Q  14 aatatattcactttaacatttgttagaccgattgatttagttgttcctttaaatatca 71  Q
    ||||| |||| |||||||||||||||||||||||||||||||| | ||||||||||||    
T  37319805 aatatgttcattttaacatttgttagaccgattgatttagttgctactttaaatatca 37319862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 225 - 304
Target Start/End: Complemental strand, 8915934 - 8915855
Alignment:
Q  225 ccaaactcaatcaaaatggagaaaatccgtcaaattaaatttgattcggacgtataaccaaatgtataggttttgctgcc 304  Q
    ||||||||| |||||| ||  ||||||||||||||| ||||||||| || || ||||||| | |||| ||||||| ||||    
T  8915934 ccaaactcagtcaaaacgggaaaaatccgtcaaattgaatttgatttgggcggataaccacaggtatgggttttgttgcc 8915855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 90; Significance: 3e-43; HSPs: 38)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 21 - 170
Target Start/End: Original strand, 3573094 - 3573243
Alignment:
Q  21 tcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagtttttataacacggtaattatcaaacaaaataatatgatata 120  Q
    |||||||||||||||||||||||||||||||||||| |||||| |||||||||| ||||||||||||||||  |||||||||||| ||||| |||| |||    
T  3573094 tcactttaacatttgttagaccgattgatttagttgctcctttgaatatcaatggtagtttttataacacgacaattatcaaacagaataacatgacata 3573193  T
Q  121 ccaacataaaataaatttctgcattcaggatgagtttgagtatgagttcg 170  Q
     ||||||||||||| ||||| ||||| ||| | ||||||||||| |||||    
T  3573194 tcaacataaaataattttctacattcgggaggggtttgagtatgggttcg 3573243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 14 - 215
Target Start/End: Complemental strand, 35194215 - 35194014
Alignment:
Q  14 aatatattcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagtttttataacacggtaattatcaaacaaaataata 113  Q
    ||||| ||||||||||||||| ||||||| ||||||||||||  | ||||||||||||||| ||||||||||||||| | |||||||||||||||||| |    
T  35194215 aatatgttcactttaacattttttagaccaattgatttagtttattctttaaatatcaatggtagtttttataacacagcaattatcaaacaaaataaca 35194116  T
Q  114 tgatataccaacataaaataaatttctgcattcaggatgagtttgagtatgagttcgggttagatacctatatatacattacccgtctcttactcgtgtt 213  Q
    |   |||  |||||||| ||| ||||| ||||| ||| | ||||||||||||||| ||| | | ||||||||||  | ||||||||| | ||| ||||||    
T  35194115 tagcatattaacataaagtaattttctacattcgggacgggtttgagtatgagtttggggtgggtacctatatacccgttacccgtcccatacccgtgtt 35194016  T
Q  214 tt 215  Q
    ||    
T  35194015 tt 35194014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 8 - 172
Target Start/End: Original strand, 30115340 - 30115504
Alignment:
Q  8 tccaagaatatattcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagtttttataacacggtaattatcaaacaaa 107  Q
    ||||| |||||  ||||||||||||||||||||| ||| |||||||||| |||||||||||| |||| | ||||||||||||||| ||||||||||||||    
T  30115340 tccaacaatatgctcactttaacatttgttagactgatcgatttagttgctcctttaaatataaatggtggtttttataacacggcaattatcaaacaaa 30115439  T
Q  108 ataatatgatataccaacataaaataaatttctgcattcaggatgagtttgagtatgagttcggg 172  Q
    |||| ||   ||| ||||||||||||| ||| ||||||| ||| | |||||| |||| |||||||    
T  30115440 ataacatagcatatcaacataaaataattttatgcattcgggacgggtttgaatatgggttcggg 30115504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 8 - 130
Target Start/End: Original strand, 12447238 - 12447360
Alignment:
Q  8 tccaagaatatattcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagtttttataacacggtaattatcaaacaaa 107  Q
    ||||| ||||||||||||||||||||||||||| |||||||||||  || ||||||||||||||||| ||||||||||||||||  ||||||||||||||    
T  12447238 tccaacaatatattcactttaacatttgttagatcgattgatttaactgctcctttaaatatcaatggtagtttttataacacgacaattatcaaacaaa 12447337  T
Q  108 ataatatgatataccaacataaa 130  Q
    |||| |||| |||  ||||||||    
T  12447338 ataacatgacatattaacataaa 12447360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 23 - 172
Target Start/End: Complemental strand, 27088568 - 27088420
Alignment:
Q  23 actttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagtttttataacacggtaattatcaaacaaaataatatgatatacc 122  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||    |||||||||||||||||| || | ||| |    
T  27088568 actttaacatttgttagaccgattgatttagttgctcctttaaatatcaatgatagtttttataacataacaattatcaaacaaaataacat-acatatc 27088470  T
Q  123 aacataaaataaatttctgcattcaggatgagtttgagtatgagttcggg 172  Q
    |||||||||||| ||||| |||||  || | ||||| ||||| |||||||    
T  27088469 aacataaaataattttctacattcgagacgggtttgggtatgggttcggg 27088420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 8 - 223
Target Start/End: Original strand, 35311679 - 35311894
Alignment:
Q  8 tccaagaatatattcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagttttta-taacacggtaattatcaaacaa 106  Q
    ||||| |||||  ||||||||||||||||||||| || ||||||||||| ||||||||||||||||| ||||||||| ||||| |  |||||||||||||    
T  35311679 tccaacaatatgctcactttaacatttgttagacggaatgatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaa 35311778  T
Q  107 aataatatgatataccaacataaaataaatttctgcattcaggatgagtttgagtatgagttcgggttagatacctatatatacattacccgtctcttac 206  Q
    ||||| || | ||| ||||||||||||| ||| | ||||  ||| | || |||||||| ||||||  | | |||||||||||   ||||||||| | |||    
T  35311779 aataacat-acatatcaacataaaataattttttacatttgggacgggtatgagtatgggttcggagtgggtacctatatatctgttacccgtcccatac 35311877  T
Q  207 tcgtgttttgaaatcgg 223  Q
     ||||||||||||||||    
T  35311878 ccgtgttttgaaatcgg 35311894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 21 - 140
Target Start/End: Original strand, 2985017 - 2985136
Alignment:
Q  21 tcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagtttttataacacggtaattatcaaacaaaataatatgatata 120  Q
    ||||||||| |||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||   |||||||||| ||||||| |||| |||    
T  2985017 tcactttaatatttgttagaccgattgatttagttgctcctttaaatatcaatgatagtttttataacacaacaattatcaaataaaataacatgacata 2985116  T
Q  121 ccaacataaaataaatttct 140  Q
     ||| ||||||||| |||||    
T  2985117 tcaatataaaataattttct 2985136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 21 - 224
Target Start/End: Complemental strand, 42987699 - 42987495
Alignment:
Q  21 tcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagttttta-taacacggtaattatcaaacaaaataatatgatat 119  Q
    ||||||| |||||||||||||  | ||||||||||| ||||||||||||||||| ||||||||| ||||| |  |||||||||||||||||| || | ||    
T  42987699 tcactttcacatttgttagacaaaatgatttagttgatcctttaaatatcaatgatagtttttattaacatgacaattatcaaacaaaataacataacat 42987600  T
Q  120 accaacataaaataaatttctgcattcaggatgagtttgagtatgagttcgggttagatacctatatatacattacccgtctcttactcgtgttttgaaa 219  Q
    | ||||||||||||| ||| | ||||  ||| | ||||| ||||| ||||||| | | ||||||||||| | |||| |||| | ||| |||||||||| |    
T  42987599 atcaacataaaataattttttacatttgggacgggtttgggtatgggttcgggatgggtacctatatatccgttacacgtcccatacccgtgttttgaga 42987500  T
Q  220 tcggg 224  Q
    |||||    
T  42987499 tcggg 42987495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 8 - 163
Target Start/End: Complemental strand, 2412958 - 2412803
Alignment:
Q  8 tccaagaatatattcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagtttttataacacggtaattatcaaacaaa 107  Q
    ||||| |||||  ||||||||| |||||||||||||||| ||||||||| ||||||||||||||||  |||||||||| ||||   ||||||||||||||    
T  2412958 tccaacaatatgctcactttaatatttgttagaccgattaatttagttgctcctttaaatatcaattgtagtttttatgacacaacaattatcaaacaaa 2412859  T
Q  108 ataatatgatataccaacataaaataaatttctgcattcaggatgagtttgagtat 163  Q
    |||| |||| ||| ||| ||||| ||| ||||||||| | ||| ||||||| ||||    
T  2412858 ataacatgacatatcaatataaagtaattttctgcatacgggacgagtttgggtat 2412803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 8 - 224
Target Start/End: Original strand, 4582975 - 4583192
Alignment:
Q  8 tccaagaatatattcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagttttta-taacacggtaattatcaaacaa 106  Q
    ||||| |||||  ||||||||||||||| ||||| || ||||||||||| ||||||||||||||||| ||||||||| ||||| |  |||||||||||||    
T  4582975 tccaacaatatgctcactttaacatttgatagacggaatgatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaa 4583074  T
Q  107 aataatatgatataccaacataaaataaatttctgcattcaggatgagtttgagtatgagttcgggttagatacctatatatacattacccgtctcttac 206  Q
    ||||| |||| ||| ||||||||| ||| ||| | ||||  ||| | || || ||||| ||| ||| | |  |||||||||  | ||||||||| | |||    
T  4583075 aataacatgacatatcaacataaagtaattttttacatttgggacgggtatgggtatgggtttggggtgggaacctatatacccgttacccgtcccatac 4583174  T
Q  207 tcgtgttttgaaatcggg 224  Q
     |||||||||||||||||    
T  4583175 ccgtgttttgaaatcggg 4583192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 25 - 259
Target Start/End: Complemental strand, 38006684 - 38006444
Alignment:
Q  25 tttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagtttttataacacggtaattatcaaacaaaataatatgatataccaa 124  Q
    ||||||| |||||||||| ||||||||||||| ||||||||||||||||| | |||||||||| |||   ||||||||||||||||| |||| |||  ||    
T  38006684 tttaacaattgttagaccaattgatttagttgctcctttaaatatcaatggtggtttttataatacgactattatcaaacaaaataacatgacatattaa 38006585  T
Q  125 cataaaataaatttctgcattcaggatgagtttgagtatgagttcgggttagatacctatatatacattacccgtctcttactcgtgttttgaaatcggg 224  Q
    |||||| ||| ||||  ||||| ||| |  |||| ||||| ||||||| | | |||||||||||   |||| |||| | ||| ||| ||||||||| |||    
T  38006584 cataaattaattttcaacattcgggacggatttgggtatgggttcggggtgggtacctatatatctgttacgcgtcccatacccgtattttgaaattggg 38006485  T
Q  225 ------ccaaactcaatcaaaatggagaaaatccgtcaaat 259  Q
          |||||| || ||||||||||||||| |||||||||    
T  38006484 gaaaacccaaacccagtcaaaatggagaaaacccgtcaaat 38006444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 21 - 224
Target Start/End: Original strand, 4920695 - 4920899
Alignment:
Q  21 tcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagtttttat-aacacggtaattatcaaacaaaataatatgatat 119  Q
    ||||||| |||||||||||||  | ||||||||||| || |||||||||||||| |||||||||| |||| |  |||||||||||||||||| || | ||    
T  4920695 tcactttcacatttgttagacaaaatgatttagttgatcatttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataacataacat 4920794  T
Q  120 accaacataaaataaatttctgcattcaggatgagtttgagtatgagttcgggttagatacctatatatacattacccgtctcttactcgtgttttgaaa 219  Q
    | ||||||||| ||| ||| | ||||  ||| | ||||| ||||| ||||||| | ||||||||||||  | ||||||||| | ||| |||||||||| |    
T  4920795 atcaacataaagtaattttttacatttgggacgggtttgggtatgggttcggggtggatacctatatacccgttacccgtcccatacccgtgttttgaga 4920894  T
Q  220 tcggg 224  Q
    |||||    
T  4920895 tcggg 4920899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 8 - 146
Target Start/End: Complemental strand, 33862415 - 33862278
Alignment:
Q  8 tccaagaatatattcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagtttttataacacggtaattatcaaacaaa 107  Q
    ||||| ||||| |||||||||||||||||||| || ||||||||||||| || |||||||||||||  ||||||||| |||| |  ||||||||||||||    
T  33862415 tccaacaatatgttcactttaacatttgttagccc-attgatttagttggtcatttaaatatcaatcgtagtttttacaacatgacaattatcaaacaaa 33862317  T
Q  108 ataatatgatataccaacataaaataaatttctgcattc 146  Q
    |||| |||  ||| ||||||||||||  |||||||||||    
T  33862316 ataacatggcatatcaacataaaatagttttctgcattc 33862278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 8 - 224
Target Start/End: Complemental strand, 17853524 - 17853309
Alignment:
Q  8 tccaagaatatattcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagttttta-taacacggtaattatcaaacaa 106  Q
    ||||| ||||| |||||||||||||||||||||| || ||||||||||| ||||||||||||||||| ||||||||| ||||| |  |||||||||||||    
T  17853524 tccaacaatatgttcactttaacatttgttagacggaatgatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaa 17853425  T
Q  107 aataatatgatataccaacataaaataaatttctgcattcaggatgagtttgagtatgagttcgggttagatacctatatatacattacccgtctcttac 206  Q
    ||||| || | ||| ||||||||| ||| ||| | ||||  ||| | || || ||||| ||||||  | | || |||||||| | ||||||||| | |||    
T  17853424 aataacat-acatatcaacataaagtaattttttacatttgggacgggtatgggtatgggttcggagtgggtatctatatatccgttacccgtcccatac 17853326  T
Q  207 tcgtgttttgaaatcggg 224  Q
     |||| ||||||||||||    
T  17853325 ccgtg-tttgaaatcggg 17853309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 22 - 173
Target Start/End: Original strand, 18206888 - 18207041
Alignment:
Q  22 cactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagtttttataacacgg-taattatcaaacaaaataatatgatata 120  Q
    |||||||| |||||||||||||||||||||||||| |||||||||||||| |  |||||||||||||||||  |||||| ||||||||||| |||  |||    
T  18206888 cactttaatatttgttagaccgattgatttagttgctcctttaaatatcattagtagtttttataacacggcaaattattaaacaaaataacatggcata 18206987  T
Q  121 ccaacata-aaataaatttctgcattcaggatgagtttgagtatgagttcgggt 173  Q
     ||||||| || ||| ||||| ||||| ||| | |||||| |||| ||||||||    
T  18206988 tcaacatagaagtaattttctacattcgggacgggtttgaatatgggttcgggt 18207041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 21 - 111
Target Start/End: Original strand, 1218626 - 1218716
Alignment:
Q  21 tcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagtttttataacacggtaattatcaaacaaaataa 111  Q
    ||||||||||||||||||||| || ||||||||||| ||||||||||||||||| |||||||| ||||| |  ||||||||||||||||||    
T  1218626 tcactttaacatttgttagacggaatgatttagttgatcctttaaatatcaatggtagtttttttaacatgacaattatcaaacaaaataa 1218716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 8 - 218
Target Start/End: Original strand, 28045511 - 28045722
Alignment:
Q  8 tccaagaatatattcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagttttta--taacacggtaattatcaaaca 105  Q
    ||||| ||||| ||||||||||||||||||||||  | ||||||||||| ||||||||||||||||| |||||||||  |||||    |||||| |||||    
T  28045511 tccaacaatatgttcactttaacatttgttagacgtaatgatttagttgatcctttaaatatcaatgatagtttttatttaacataacaattataaaaca 28045610  T
Q  106 aaataatatgatataccaacataaaataaatttctgcattcaggatgagtttgagtatgagttcgggttagatacctatatatacattacccgtctctta 205  Q
    |||||| |||| ||| ||||||||| ||| ||| | ||||  ||| | || || ||||| ||||||| | | ||||||||||  | ||||||||| | ||    
T  28045611 aaataacatgacatatcaacataaagtaattttttacatttgggacgggtatgggtatgggttcggg-tgggtacctatatacccgttacccgtcccata 28045709  T
Q  206 ctcgtgttttgaa 218  Q
     ||||||||||||    
T  28045710 ttcgtgttttgaa 28045722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 8 - 111
Target Start/End: Complemental strand, 3564960 - 3564856
Alignment:
Q  8 tccaagaatatattcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagttttta-taacacggtaattatcaaacaa 106  Q
    ||||| |||||  ||||||||||||||||||||| || ||||||||||| ||||||||||||||||| ||||||||| ||||| |  |||||||||||||    
T  3564960 tccaacaatatgctcactttaacatttgttagacggaatgatttagttgatcctttaaatatcaatgatagtttttattaacatgacaattatcaaacaa 3564861  T
Q  107 aataa 111  Q
    |||||    
T  3564860 aataa 3564856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 8 - 223
Target Start/End: Complemental strand, 29246184 - 29245968
Alignment:
Q  8 tccaagaatatattcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagtttttat-aacacggtaattatcaaacaa 106  Q
    ||||| |||||  ||||||||||||||||||||| || ||||||| ||| | | ||||||||||||| |||| ||||| ||||    |||||||||||||    
T  29246184 tccaacaatatgctcactttaacatttgttagacggaatgatttaattgattcattaaatatcaatggtagtgtttattaacataacaattatcaaacaa 29246085  T
Q  107 aataatatgatataccaacataaaataaatttctgcattcaggatgagtttgagtatgagttcgggttagatacctatatatacattacccgtctcttac 206  Q
    ||||| |||| ||||||||||||||||| ||| | ||||  ||||| || || ||||| ||| ||| | | |||||||||| |  |||  |||| | |||    
T  29246084 aataacatgacataccaacataaaataattttttacatttgggatgggtatgggtatgggtttggggtgggtacctatatacatgttattcgtcccatac 29245985  T
Q  207 tcgtgttttgaaatcgg 223  Q
     ||||||||||||||||    
T  29245984 ccgtgttttgaaatcgg 29245968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 21 - 172
Target Start/End: Original strand, 40517675 - 40517827
Alignment:
Q  21 tcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagttttta-taacacggtaattatcaaacaaaataatatgatat 119  Q
    ||||||| |||||||||||||  | ||||||||||| ||||||||||||||||| ||||||||| ||||| |  |||||||||||||||||| || | ||    
T  40517675 tcactttcacatttgttagacaaaatgatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataacataacat 40517774  T
Q  120 accaacataaaataaatttctgcattcaggatgagtttgagtatgagttcggg 172  Q
    | ||||||||||||| ||| | | ||  ||| | ||||||||||| |||||||    
T  40517775 atcaacataaaataattttttacctttgggacgggtttgagtatgggttcggg 40517827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 23 - 103
Target Start/End: Complemental strand, 42717849 - 42717769
Alignment:
Q  23 actttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagtttttataacacggtaattatcaaa 103  Q
    ||||||||||||||||||||| |||||||||||  ||||||||||||||||| ||||||||||||||||  ||||||||||    
T  42717849 actttaacatttgttagaccggttgatttagtttctcctttaaatatcaatgatagtttttataacacgacaattatcaaa 42717769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 21 - 172
Target Start/End: Complemental strand, 22695121 - 22694969
Alignment:
Q  21 tcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagttttta-taacacggtaattatcaaacaaaataatatgatat 119  Q
    ||||||| |||||||||||||  | |||| |||||| ||||||||||||||||| ||||||||| ||||| |  |||||||||||||||||| || | ||    
T  22695121 tcactttcacatttgttagacaaaatgatatagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataacattacat 22695022  T
Q  120 accaacataaaataaatttctgcattcaggatgagtttgagtatgagttcggg 172  Q
    | ||||||||||||| ||| | ||||  ||| | ||||| ||||| |||||||    
T  22695021 atcaacataaaataattttttacatttgggacgggtttgggtatgggttcggg 22694969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 25 - 224
Target Start/End: Complemental strand, 8453587 - 8453389
Alignment:
Q  25 tttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagtttttataacacggtaattatcaaacaaaataatatgatataccaa 124  Q
    ||||||||||||| |||||| ||||||||||  ||||||||||||||||| || ||||||||||| |  |||||| |||||||||||   || |||  ||    
T  8453587 tttaacatttgtttgaccgaatgatttagttactcctttaaatatcaatggtaatttttataacatgacaattattaaacaaaataac--gacatattaa 8453490  T
Q  125 cataaaataaatttctgcattcaggatgagttt-gagtatgagttcgggttagatacctatatatacattacccgtctcttactcgtgttttgaaatcgg 223  Q
    |||||| ||| ||||| ||||  ||| |||||| |||||||| || ||| |   |||||||||||   |||||| || | ||| ||||||||||||||||    
T  8453489 cataaactaattttctacatttgggacgagttttgagtatgactttggggtgtgtacctatatatctgttacccatcccatacccgtgttttgaaatcgg 8453390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 21 - 223
Target Start/End: Original strand, 30996466 - 30996668
Alignment:
Q  21 tcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagttttta-taacacggtaattatcaaacaaaataatatgatat 119  Q
    ||||||||||||| ||||||| || ||||||| ||| ||||||||||||||| | ||||||||| ||||| |  |||||||||||||||||| |||  ||    
T  30996466 tcactttaacatt-gttagacggaatgatttatttgatcctttaaatatcaacggtagtttttattaacatgacaattatcaaacaaaataacatggcat 30996564  T
Q  120 accaacataaaataaatttctgcattcaggatgagtttgagtatgagttcgggttagatacctatatatacattacccgtctcttactcgtgttttgaaa 219  Q
    | |||| |||| ||| ||| | ||||  ||| | ||||| || || ||||||| | | ||||||||||  | ||||| ||| | |||||||||||| |||    
T  30996565 atcaacttaaagtaattttttacatttgggacgggtttgggtgtgtgttcggggtgggtacctatatacccgttacctgtcccatactcgtgttttaaaa 30996664  T
Q  220 tcgg 223  Q
    ||||    
T  30996665 tcgg 30996668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 21 - 130
Target Start/End: Complemental strand, 5908908 - 5908798
Alignment:
Q  21 tcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagttttta-taacacggtaattatcaaacaaaataatatgatat 119  Q
    ||||||| |||||||||||||  | | ||||||||| ||||||||||||||||| ||||||||| ||||| |  |||||||||||||||||| || | ||    
T  5908908 tcactttcacatttgttagacaaaattatttagttgatcctttaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataacataacat 5908809  T
Q  120 accaacataaa 130  Q
    | |||||||||    
T  5908808 atcaacataaa 5908798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 14 - 223
Target Start/End: Original strand, 15890069 - 15890278
Alignment:
Q  14 aatatattcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagttttta-taacacggtaattatcaaacaaaataat 112  Q
    ||||| ||||||||||||||||||||||  | | ||||| ||| ||||| ||||||||||| ||||||| | ||| | |  |||||||||| |||||||     
T  15890069 aatatgttcactttaacatttgttagacgtaattatttaattgatccttcaaatatcaatggtagttttcattaatatgacaattatcaaataaaataac 15890168  T
Q  113 atgatataccaacataaaataaatttctgcattcaggatgagtttgagtatgagttcgggttagatacctatatatacattacccgtctcttactcgtgt 212  Q
    |||| ||| ||||||||| ||| ||| | ||||  ||| | || || ||||| ||||||| | | ||||||||||  | ||||||||| | ||| |||||    
T  15890169 atgacatatcaacataaagtaattttttacatttgggacgggtatgggtatgggttcggg-tgggtacctatatacccgttacccgtcccatacccgtgt 15890267  T
Q  213 tttgaaatcgg 223  Q
    |||||||||||    
T  15890268 tttgaaatcgg 15890278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 31 - 187
Target Start/End: Complemental strand, 6092728 - 6092571
Alignment:
Q  31 atttgttagaccgattgatttagttgttcctttaaatatcaatgttagttttta-taacacggtaattatcaaacaaaataatatgatataccaacataa 129  Q
    |||||||||||  | ||||||||||| ||||||||||||||||| ||||||||| |||||  | |||||||||||||||||| || | ||| ||||||||    
T  6092728 atttgttagacaaaatgatttagttgatcctttaaatatcaatggtagtttttattaacattgcaattatcaaacaaaataacataacatatcaacataa 6092629  T
Q  130 aataaatttctgcattcaggatgagtttgagtatgagttcgggttagatacctatata 187  Q
    | ||| ||| | ||||  ||| |  |||| ||||| ||||||| | | ||||||||||    
T  6092628 agtaattttttacatttgggacggatttgggtatgggttcggggtgggtacctatata 6092571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 8 - 111
Target Start/End: Complemental strand, 13402235 - 13402131
Alignment:
Q  8 tccaagaatatattcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagttttta-taacacggtaattatcaaacaa 106  Q
    ||||| |||||  ||| |||||||||||||||||  | ||||||||||| ||||||||||||||||  ||||||||| ||||| |  |||||||||||||    
T  13402235 tccaacaatatgctcattttaacatttgttagacgaaatgatttagttgatcctttaaatatcaatagtagtttttattaacatgacaattatcaaacaa 13402136  T
Q  107 aataa 111  Q
    |||||    
T  13402135 aataa 13402131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 21 - 111
Target Start/End: Complemental strand, 6156138 - 6156047
Alignment:
Q  21 tcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagttttta-taacacggtaattatcaaacaaaataa 111  Q
    ||||||||||||||||||||| || ||||||| ||| ||||||||||||||||| || |||||| || || |  ||||||||||||||||||    
T  6156138 tcactttaacatttgttagacggaatgatttatttgctcctttaaatatcaatgatattttttattaccatgacaattatcaaacaaaataa 6156047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 22 - 111
Target Start/End: Original strand, 6369566 - 6369656
Alignment:
Q  22 cactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagttttta-taacacggtaattatcaaacaaaataa 111  Q
    |||||||||||||||||||| || ||||||||||| || |||||| ||||| | ||||||| | ||||| | |||||||||||||||||||    
T  6369566 cactttaacatttgttagacggaatgatttagttgatcttttaaacatcaacggtagttttcattaacatgataattatcaaacaaaataa 6369656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 21 - 130
Target Start/End: Complemental strand, 20973705 - 20973595
Alignment:
Q  21 tcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagttttta-taacacggtaattatcaaacaaaataatatgatat 119  Q
    ||||||||| |||| |||||| || ||||||||||| | ||||| ||||||||| ||||||||| ||||| |  |||||||||||||||||  |||| ||    
T  20973705 tcactttaatattttttagacggaatgatttagttgatactttacatatcaatggtagtttttattaacatgacaattatcaaacaaaataccatgacat 20973606  T
Q  120 accaacataaa 130  Q
    | |||||||||    
T  20973605 atcaacataaa 20973595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 21 - 187
Target Start/End: Complemental strand, 12834795 - 12834627
Alignment:
Q  21 tcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagttttta-taacacggtaattatcaaacaaaataatat-gata 118  Q
    |||||||||||||||||||||  |  |||||| ||| || || ||||||||||| ||||||||| ||||| |  |||||||||||||||||| || || |    
T  12834795 tcactttaacatttgttagacgtaacgatttaattgatcattcaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataacatagaca 12834696  T
Q  119 taccaacataaaataaatttctgcattcaggatgagtttgagtatgagttcgggttagatacctatata 187  Q
    || ||||||||| ||| ||| | ||||  ||| | || || ||||| ||||||| ||| ||||||||||    
T  12834695 tatcaacataaattaattttttacatttgggacgggtatgggtatgggttcggggtaggtacctatata 12834627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 8 - 74
Target Start/End: Complemental strand, 27302965 - 27302899
Alignment:
Q  8 tccaagaatatattcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatg 74  Q
    ||||| |||||  ||||||||||||||||||||  || ||||||||||| |||||||||||||||||    
T  27302965 tccaacaatatgatcactttaacatttgttagatggaatgatttagttgatcctttaaatatcaatg 27302899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 21 - 85
Target Start/End: Original strand, 10126977 - 10127041
Alignment:
Q  21 tcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagtttttat 85  Q
    ||||||| |||||||||||||  | ||||||||||| || |||||||||||||| ||||||||||    
T  10126977 tcactttcacatttgttagacaaaatgatttagttgatcttttaaatatcaatggtagtttttat 10127041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 225 - 268
Target Start/End: Complemental strand, 2412723 - 2412680
Alignment:
Q  225 ccaaactcaatcaaaatggagaaaatccgtcaaattaaatttga 268  Q
    ||||||||||||||||||| |||||||||||||||| |||||||    
T  2412723 ccaaactcaatcaaaatggggaaaatccgtcaaattgaatttga 2412680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 21 - 223
Target Start/End: Complemental strand, 12866772 - 12866568
Alignment:
Q  21 tcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagttttta-taacacggtaattatcaaacaaaataatat-gata 118  Q
    |||||||||||||||||||||  |   ||||| ||| || || ||||||||||| ||||||||| ||||| |  |||||||||||||||||| || || |    
T  12866772 tcactttaacatttgttagacgtaacaatttaattgatcattcaaatatcaatggtagtttttattaacatgacaattatcaaacaaaataacatagaca 12866673  T
Q  119 taccaacataaaataaatttctgcattcaggatgagtttgagtatgagttcgggttagatacctatatatacattacccgtctcttactcgtgttttgaa 218  Q
    || ||||||||| ||| ||| | ||||  ||| | || || ||||| ||||| | | | ||||||||||    ||||||||| | ||| | |||||||||    
T  12866672 tatcaacataaagtaattttttacatttgggacgggtatgggtatgggttcgcggtgggtacctatatacctgttacccgtcccatacccatgttttgaa 12866573  T
Q  219 atcgg 223  Q
    |||||    
T  12866572 atcgg 12866568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 94 - 172
Target Start/End: Original strand, 15564579 - 15564657
Alignment:
Q  94 aattatcaaacaaaataatatgatataccaacataaaataaatttctgcattcaggatgagtttgagtatgagttcggg 172  Q
    |||| ||||| ||||||| |||| ||| |||  |||| ||| ||||| ||||| ||| |||||||||||||||||||||    
T  15564579 aattttcaaaaaaaataacatgacatatcaatgtaaagtaattttctacattcgggacgagtttgagtatgagttcggg 15564657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 76 - 133
Target Start/End: Complemental strand, 33420494 - 33420437
Alignment:
Q  76 tagtttttataacacggtaattatcaaacaaaataatatgatataccaacataaaata 133  Q
    ||||||||||||||||  |||||||||| ||||||| |||| ||| ||| ||||||||    
T  33420494 tagtttttataacacgacaattatcaaataaaataacatgacatatcaatataaaata 33420437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 89; Significance: 1e-42; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 8 - 224
Target Start/End: Original strand, 33250 - 33466
Alignment:
Q  8 tccaagaatatattcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagtttttataacacggtaattatcaaacaaa 107  Q
    ||||| ||||| || ||||||||| |||||||||||||||||||||||||||||||||||||||||  |||||||||||||||   ||||| ||||||||    
T  33250 tccaacaatatgtttactttaacaattgttagaccgattgatttagttgttcctttaaatatcaatcgtagtttttataacacaacaattaccaaacaaa 33349  T
Q  108 ataatatgatataccaacataaaataaatttctgcattcaggatgagtttgagtatgagttcgggttagatacctatatatacattacccgtctcttact 207  Q
    |||| |||  ||  ||||||||| ||  ||||||||||| ||| ||||||| ||||| ||||||| | | ||| ||||||  | ||||||||| | |||     
T  33350 ataacatggcatgtcaacataaagtagttttctgcattcgggacgagtttgggtatgggttcggggtgggtacatatatacccgttacccgtcccatacc 33449  T
Q  208 cgtgttttgaaatcggg 224  Q
    |||||||||||||||||    
T  33450 cgtgttttgaaatcggg 33466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 87; Significance: 2e-41; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 14 - 224
Target Start/End: Original strand, 90460 - 90670
Alignment:
Q  14 aatatattcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagtttttataacacggtaattatcaaacaaaataata 113  Q
    |||||| ||||||||| |||||||||||||||||||||| ||| ||||||||||||||||| | ||||| |||||||   |||||| ||||||||||| |    
T  90460 aatatactcactttaatatttgttagaccgattgatttatttgctcctttaaatatcaatggttgttttaataacacatcaattattaaacaaaataaca 90559  T
Q  114 tgatataccaacataaaataaatttctgcattcaggatgagtttgagtatgagttcgggttagatacctatatatacattacccgtctcttactcgtgtt 213  Q
    ||  ||| ||||||||||||| ||||||||||||||| || |||| ||||| |||||||   | |||| |||||  | ||| ||||||| ||| ||||||    
T  90560 tggcatatcaacataaaataattttctgcattcaggacgaatttgtgtatgggttcggggagggtaccaatatacccgttaaccgtctcatacccgtgtt 90659  T
Q  214 ttgaaatcggg 224  Q
    |||||||||||    
T  90660 ttgaaatcggg 90670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 87; Significance: 2e-41; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 21 - 163
Target Start/End: Complemental strand, 197545 - 197403
Alignment:
Q  21 tcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagtttttataacacggtaattatcaaacaaaataatatgatata 120  Q
    ||||||||| |||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| ||||||||||||||||||||| |||  |||    
T  197545 tcactttaatatttgttagaccgattgatttagttgctcctttaaatatcaatggtagtttttataacaaggtaattatcaaacaaaataacatggcata 197446  T
Q  121 ccaacataaaataaatttctgcattcaggatgagtttgagtat 163  Q
     ||||||||| ||| ||||||||||| ||| | ||||| ||||    
T  197445 tcaacataaagtaattttctgcattcgggacgggtttgggtat 197403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0294 (Bit Score: 79; Significance: 1e-36; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 21 - 223
Target Start/End: Original strand, 14645 - 14847
Alignment:
Q  21 tcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagtttttataacacggtaattatcaaacaaaataatatgatata 120  Q
    |||||||||||||||||| ||||||||||||||||| ||||||||||||||||| ||||||||| |||||  ||||||||||||||||||||||   |||    
T  14645 tcactttaacatttgttaaaccgattgatttagttgctcctttaaatatcaatggtagtttttacaacacaataattatcaaacaaaataatatatcata 14744  T
Q  121 ccaacataaaataaatttctgcattcaggatgagtttgagtatgagttcgggttagatacctatatatacattacccgtctcttactcgtgttttgaaat 220  Q
     |||||| |||||| ||||| ||||  ||| ||||||| ||||| ||||  | | | ||||||||||  ||||| ||||| | | |  ||||||||||||    
T  14745 tcaacattaaataattttctacatttgggacgagtttgggtatgtgttcaaggtgggtacctatatacccattatccgtcccatgcatgtgttttgaaat 14844  T
Q  221 cgg 223  Q
    |||    
T  14845 cgg 14847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 68; Significance: 4e-30; HSPs: 2)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 14 - 145
Target Start/End: Original strand, 6269 - 6400
Alignment:
Q  14 aatatattcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagtttttataacacggtaattatcaaacaaaataata 113  Q
    ||||| ||||||||||||||||||||| ||||||||||||||| |||||||||| |||||| || |||||||| ||||  || ||||||||||||||| |    
T  6269 aatatgttcactttaacatttgttagatcgattgatttagttgctcctttaaatttcaatggtaatttttatagcacgacaactatcaaacaaaataaca 6368  T
Q  114 tgatataccaacataaaataaatttctgcatt 145  Q
    ||  ||| ||||||||| ||| ||||||||||    
T  6369 tggcatatcaacataaagtaactttctgcatt 6400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 225 - 266
Target Start/End: Original strand, 7788 - 7829
Alignment:
Q  225 ccaaactcaatcaaaatggagaaaatccgtcaaattaaattt 266  Q
    |||||||||||||||| || ||||| ||||||||||||||||    
T  7788 ccaaactcaatcaaaacggggaaaacccgtcaaattaaattt 7829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 66; Significance: 7e-29; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 8 - 89
Target Start/End: Complemental strand, 14376 - 14295
Alignment:
Q  8 tccaagaatatattcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagtttttataaca 89  Q
    ||||| ||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||    
T  14376 tccaacaatatgttcactttaacatttgttagaccgattgatttaattgttcctttaaatatcaatggtagtttttataaca 14295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0135 (Bit Score: 65; Significance: 3e-28; HSPs: 1)
Name: scaffold0135
Description:

Target: scaffold0135; HSP #1
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 8 - 116
Target Start/End: Original strand, 36012 - 36123
Alignment:
Q  8 tccaagaatatattcacttt-aacatttgttagaccgattgatttagttg--ttcctttaaatatcaatgttagtttttataacacggtaattatcaaac 104  Q
    ||||| ||||| |||||||| |||||||||||||||||||||||||||||  |||||||||||||||||| ||||||||||||||||  | |||||||||    
T  36012 tccaacaatatgttcacttttaacatttgttagaccgattgatttagttgctttcctttaaatatcaatggtagtttttataacacgacagttatcaaac 36111  T
Q  105 aaaataatatga 116  Q
    ||||||| ||||    
T  36112 aaaataacatga 36123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0189 (Bit Score: 64; Significance: 1e-27; HSPs: 1)
Name: scaffold0189
Description:

Target: scaffold0189; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 8 - 130
Target Start/End: Original strand, 4113 - 4236
Alignment:
Q  8 tccaagaatatattcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagttttta-taacacggtaattatcaaacaa 106  Q
    ||||| ||||| |||||||||||||||||||||  || ||||||||||| ||||||||||||||||| ||||||||| ||||| |  |||||||||||||    
T  4113 tccaacaatatgttcactttaacatttgttagatggaatgatttagttgctcctttaaatatcaatgatagtttttattaacatgacaattatcaaacaa 4212  T
Q  107 aataatatgatataccaacataaa 130  Q
    ||||| |||| ||| |||||||||    
T  4213 aataacatgacatatcaacataaa 4236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097 (Bit Score: 52; Significance: 2e-20; HSPs: 1)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 8 - 103
Target Start/End: Original strand, 33440 - 33535
Alignment:
Q  8 tccaagaatatattcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagtttttataacacggtaattatcaaa 103  Q
    ||||| ||||| |||||||||| |||||||| ||||| ||||||| ||| | ||||||||||||||| ||||||||||||||||  ||||||||||    
T  33440 tccaacaatatgttcactttaatatttgttacaccgactgatttaattgcttctttaaatatcaatggtagtttttataacacgaaaattatcaaa 33535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0519 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0519
Description:

Target: scaffold0519; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 8 - 67
Target Start/End: Original strand, 10157 - 10216
Alignment:
Q  8 tccaagaatatattcactttaacatttgttagaccgattgatttagttgttcctttaaat 67  Q
    ||||| ||||| |||||||||||||||||||||| || ||||||||||| ||||||||||    
T  10157 tccaacaatatgttcactttaacatttgttagacggaatgatttagttgatcctttaaat 10216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1630 (Bit Score: 34; Significance: 0.0000000009; HSPs: 1)
Name: scaffold1630
Description:

Target: scaffold1630; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 21 - 74
Target Start/End: Original strand, 1492 - 1545
Alignment:
Q  21 tcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatg 74  Q
    ||||||| |||||||||||||  | ||||||||||| |||||||||||||||||    
T  1492 tcactttcacatttgttagacaaaatgatttagttgatcctttaaatatcaatg 1545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0902 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0902
Description:

Target: scaffold0902; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 14 - 89
Target Start/End: Original strand, 748 - 823
Alignment:
Q  14 aatatattcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagtttttataaca 89  Q
    ||||| |||||| |||||||| || || ||| |||||| |||| | ||||||||||||||| ||| ||||||||||    
T  748 aatatgttcactataacatttctttgatcgaatgatttggttgctactttaaatatcaatggtaggttttataaca 823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0095 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0095
Description:

Target: scaffold0095; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 8 - 85
Target Start/End: Complemental strand, 32761 - 32685
Alignment:
Q  8 tccaagaatatattcactttaacatttgttagaccgattgatttagttgttcctttaaatatcaatgttagtttttat 85  Q
    ||||| |||||  ||||||||||||||||||||| || ||||||| ||| | | |||||||||| || ||||||||||    
T  32761 tccaacaatatgctcactttaacatttgttagacggaatgatttaattgat-cattaaatatcactggtagtttttat 32685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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