View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF20467_high_9 (Length: 379)
Name: NF20467_high_9
Description: NF20467
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20467_high_9 |
 |  |
|
| [»] chr4 (10 HSPs) |
 |  |
|
| [»] chr6 (6 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 231; Significance: 1e-127; HSPs: 10)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 1 - 379
Target Start/End: Original strand, 31245320 - 31245698
Alignment:
| Q |
1 |
tagttcttgataatgttgatcatgttgaacaattggataaattggccatgacacgagaatgtctaggcacagggagtagaatcattgtaatttccagaga |
100 |
Q |
| |
|
|||||||||||||||||||||| ||||||||| ||||||||||||| |||||||||||||| ||||||||||||||||||||||| ||||||| ||||| |
|
|
| T |
31245320 |
tagttcttgataatgttgatcaagttgaacaactggataaattggctatgacacgagaatggctaggcacagggagtagaatcatcataatttctagaga |
31245419 |
T |
 |
| Q |
101 |
cgaccatatcttgagagagcatggagtagatgaagtttacaatgttccactcttagatcataataatgcccttcgattgttttgtaagaaagctttcaaa |
200 |
Q |
| |
|
| |||||||||||||||||||||||||||||||| ||||| |||| |||||| ||||||||||||||||||| ||||||||||| ||| |||||||| |
|
|
| T |
31245420 |
tgttcatatcttgagagagcatggagtagatgaagtgtacaaagttcgactcttggatcataataatgcccttcaattgttttgtaggaaggctttcaag |
31245519 |
T |
 |
| Q |
201 |
agtgattatatcatgagtggttacatagacttgacatatgatgcactcacatatgtagatggccttccattagcaattaaagcgttaggctcgtttttgt |
300 |
Q |
| |
|
|||||| |||||||||| ||||||||| |||||||| |||||||||| ||||||| |||||||||||||||||||||||| || ||||| ||||||| |
|
|
| T |
31245520 |
agtgatgatatcatgagcggttacatatacttgacagatgatgcactaacatatgccaatggccttccattagcaattaaagttttgggctcatttttgt |
31245619 |
T |
 |
| Q |
301 |
atggtcgaaatgtatctgaatggagaagtgcattggcaaaattaagagagaatccaaggacagatattatggatgtact |
379 |
Q |
| |
|
|||| ||| |||| ||||||||||||||||||||||||| |||||||| || |||||||||||||||||||||||||| |
|
|
| T |
31245620 |
atggccgagatgtctctgaatggagaagtgcattggcaaggttaagagaaaacccaaggacagatattatggatgtact |
31245698 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 4 - 376
Target Start/End: Complemental strand, 31150178 - 31149806
Alignment:
| Q |
4 |
ttcttgataatgttgatcatgttgaacaattggataaattggccatgacacgagaatgtctaggcacagggagtagaatcattgtaatttccagagacga |
103 |
Q |
| |
|
||||||| ||||||||||| ||||||||| | || ||||| ||| ||| || ||||| |||| | ||||||||||||||| ||||||| |||||||| |
|
|
| T |
31150178 |
ttcttgacaatgttgatcaagttgaacaactcgagaaattagccgtgaatcgtgaatggttaggtgcggggagtagaatcattataatttctagagacga |
31150079 |
T |
 |
| Q |
104 |
ccatatcttgagagagcatggagtagatgaagtttacaatgttccactcttagatcataataatgcccttcgattgttttgtaagaaagctttcaaaagt |
203 |
Q |
| |
|
|||||||||| |||| ||||||| |||| |||||||| ||||||||| | ||| | | | | |||| ||| ||| || |||||||||||| | |
|
|
| T |
31150078 |
gcatatcttgaaagagtatggagtggatgttgtttacaaagttccactcctgaatcggactgactctcttcaattatttagtcgaaaagctttcaaactt |
31149979 |
T |
 |
| Q |
204 |
gattatatcatgagtggtta-catagacttgacatatgatgcactcacatatgtagatggccttccattagcaattaaagcgttaggctcgtttttgtat |
302 |
Q |
| |
|
||| |||| |||||| |||| ||| | ||| ||| ||| ||| | |||| ||||||| || |||||||||||| |||||||||||||||||| |
|
|
| T |
31149978 |
gatcatattatgagtagttatgata-agttggcatctgagatactaaggtatgctaatggcctacctctagcaattaaagtattaggctcgtttttgtat |
31149880 |
T |
 |
| Q |
303 |
ggtcgaaatgtatctgaatggagaagtgcattggcaaaattaagagagaatccaaggacagatattatggatgt |
376 |
Q |
| |
|
| ||||||| | | |||||||| |||||||||||||| ||| ||||| | ||||| | |||||| |||||||| |
|
|
| T |
31149879 |
gatcgaaatatttttgaatggaaaagtgcattggcaagattgagagaaagtccaaacaaagatatcatggatgt |
31149806 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 7 - 154
Target Start/End: Complemental strand, 31159076 - 31158929
Alignment:
| Q |
7 |
ttgataatgttgatcatgttgaacaattggataaattggccatgacacgagaatgtctaggcacagggagtagaatcattgtaatttccagagacgacca |
106 |
Q |
| |
|
|||||||||||||| | ||||||||| | |||||||| || ||| || ||||| |||| |||||||||||||| || ||||||| ||||| || || |
|
|
| T |
31159076 |
ttgataatgttgataaagttgaacaacttgataaattagctgtgaatcgtgaatgcttaggtgcagggagtagaatcgttataatttctagagatgaaca |
31158977 |
T |
 |
| Q |
107 |
tatcttgagagagcatggagtagatgaagtttacaatgttccactctt |
154 |
Q |
| |
|
|||||||| |||| ||||||| |||| ||||||||| ||||||||||| |
|
|
| T |
31158976 |
tatcttgaaagagtatggagttgatgtagtttacaaagttccactctt |
31158929 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 71 - 376
Target Start/End: Complemental strand, 31019563 - 31019258
Alignment:
| Q |
71 |
agggagtagaatcattgtaatttccagagacgaccatatcttgagagagcatggagtagatgaagtttacaatgttccactcttagatcataataatgcc |
170 |
Q |
| |
|
|||||||||||||||| ||||||| ||||| || |||||||||| ||| ||||||| |||||||||||||| ||||||||||| || | | || | |
|
|
| T |
31019563 |
agggagtagaatcattataatttctagagatgagcatatcttgaatgagtatggagttgatgaagtttacaaagttccactcttgaatgagaccaactct |
31019464 |
T |
 |
| Q |
171 |
cttcgattgttttgtaagaaagctttcaaaagtgattatatcatgagtggtta-catagacttgacatatgatgcactcacatatgtagatggccttcca |
269 |
Q |
| |
|
|||| ||| |||||| | |||||||||||| |||| |||| ||||||||||| ||| || || || ||| | || | |||| ||||||| ||| |
|
|
| T |
31019463 |
cttcaattattttgtcaaaaagctttcaaacttgatcatattatgagtggttatgataaac-tggcacttgacacgctatcttatgccaatggcctacca |
31019365 |
T |
 |
| Q |
270 |
ttagcaattaaagcgttaggctcgtttttgtatggtcgaaatgtatctgaatggagaagtgcattggcaaaattaagagagaatccaaggacagatatta |
369 |
Q |
| |
|
|||||||||||| || ||||| ||||||| ||||||| || | || |||||||||||||||||||| | ||| | ||| | ||||| | |||||||| |
|
|
| T |
31019364 |
ctagcaattaaagtattgggctcatttttgtttggtcgagatatctccgaatggagaagtgcattggctagattgaaagaaagtccaaacaaagatatta |
31019265 |
T |
 |
| Q |
370 |
tggatgt |
376 |
Q |
| |
|
||||||| |
|
|
| T |
31019264 |
tggatgt |
31019258 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 70 - 154
Target Start/End: Complemental strand, 31029445 - 31029361
Alignment:
| Q |
70 |
cagggagtagaatcattgtaatttccagagacgaccatatcttgagagagcatggagtagatgaagtttacaatgttccactctt |
154 |
Q |
| |
|
||||||||||||||||| ||||||| ||||| || |||||||||| ||| ||||||| |||||||||||||| ||||||||||| |
|
|
| T |
31029445 |
cagggagtagaatcattataatttctagagatgagcatatcttgaatgagtatggagttgatgaagtttacaaagttccactctt |
31029361 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 7 - 154
Target Start/End: Original strand, 31489919 - 31490066
Alignment:
| Q |
7 |
ttgataatgttgatcatgttgaacaattggataaattggccatgacacgagaatgtctaggcacagggagtagaatcattgtaatttccagagacgacca |
106 |
Q |
| |
|
|||||||||||||| | |||| |||| | |||||||||| ||| || ||||| |||| ||||||||||||||||| ||||||| |||| || || |
|
|
| T |
31489919 |
ttgataatgttgataaagttggacaacttgataaattgggtgtgaatcgtgaatggttaggtgcagggagtagaatcattataatttctggagatgaaca |
31490018 |
T |
 |
| Q |
107 |
tatcttgagagagcatggagtagatgaagtttacaatgttccactctt |
154 |
Q |
| |
|
|||||||| |||| ||||||| |||| |||||||| ||||||||||| |
|
|
| T |
31490019 |
tatcttgaaagagtatggagttgatgtagtttacagagttccactctt |
31490066 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 295 - 376
Target Start/End: Complemental strand, 31033556 - 31033475
Alignment:
| Q |
295 |
ttttgtatggtcgaaatgtatctgaatggagaagtgcattggcaaaattaagagagaatccaaggacagatattatggatgt |
376 |
Q |
| |
|
|||||| |||||||||| | |||||||||| |||||||||||| | ||| ||||| ||||||| | ||||||||||||||| |
|
|
| T |
31033556 |
ttttgtgtggtcgaaatatctctgaatggacaagtgcattggctagattgagagaaaatccaaataaagatattatggatgt |
31033475 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 259 - 337
Target Start/End: Original strand, 31477470 - 31477548
Alignment:
| Q |
259 |
atggccttccattagcaattaaagcgttaggctcgtttttgtatggtcgaaatgtatctgaatggagaagtgcattggc |
337 |
Q |
| |
|
||||||| ||| | |||||||||| || || || ||||||| |||||| || ||||||||||||||||||||||||| |
|
|
| T |
31477470 |
atggcctaccacttgcaattaaagtattgggttcatttttgtttggtcgggatatatctgaatggagaagtgcattggc |
31477548 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 271 - 357
Target Start/End: Complemental strand, 31527972 - 31527886
Alignment:
| Q |
271 |
tagcaattaaagcgttaggctcgtttttgtatggtcgaaatgtatctgaatggagaagtgcattggcaaaattaagagagaatccaa |
357 |
Q |
| |
|
|||| |||||||| || ||||| ||||||| ||||||| || | | ||||||||||||||||||| | | ||| ||||| ||||||| |
|
|
| T |
31527972 |
tagcgattaaagcattgggctcatttttgtttggtcgagatatttatgaatggagaagtgcattgactagattgagagacaatccaa |
31527886 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 259 - 376
Target Start/End: Complemental strand, 31029256 - 31029139
Alignment:
| Q |
259 |
atggccttccattagcaattaaagcgttaggctcgtttttgtatggtcgaaatgtatctgaatggagaagtgcattggcaaaattaagagagaatccaag |
358 |
Q |
| |
|
||||||| ||| |||| ||||||| || ||||| ||||||| ||||||| || | ||||||||||||||| |||||| | ||| ||||| ||||| |
|
|
| T |
31029256 |
atggcctaccactagctattaaagtattgggctcatttttgtttggtcgagatatctctgaatggagaagtaaattggctagattgagagaatgtccaat |
31029157 |
T |
 |
| Q |
359 |
gacagatattatggatgt |
376 |
Q |
| |
|
| ||||||||||||||| |
|
|
| T |
31029156 |
caaagatattatggatgt |
31029139 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 183; Significance: 7e-99; HSPs: 6)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 183; E-Value: 7e-99
Query Start/End: Original strand, 1 - 379
Target Start/End: Original strand, 13609371 - 13609749
Alignment:
| Q |
1 |
tagttcttgataatgttgatcatgttgaacaattggataaattggccatgacacgagaatgtctaggcacagggagtagaatcattgtaatttccagaga |
100 |
Q |
| |
|
|||||||||||||||||||| | ||||||||| |||||||| ||| ||| ||||||||||||||||| ||||||||||||| || |||||||| ||||| |
|
|
| T |
13609371 |
tagttcttgataatgttgataaagttgaacaactggataaactggacataacacgagaatgtctaggttcagggagtagaattatcgtaatttctagaga |
13609470 |
T |
 |
| Q |
101 |
cgaccatatcttgagagagcatggagtagatgaagtttacaatgttccactcttagatcataataatgcccttcgattgttttgtaagaaagctttcaaa |
200 |
Q |
| |
|
| ||||||||||||||||||||||||||||||| |||| | || | | ||||||| |||| ||||||||||||||||||||| ||||||||||||| |
|
|
| T |
13609471 |
tggccatatcttgagagagcatggagtagatgaaatttatgaagtacgagcattagatcttaatgatgcccttcgattgttttgtaggaaagctttcaaa |
13609570 |
T |
 |
| Q |
201 |
agtgattatatcatgagtggttacatagacttgacatatgatgcactcacatatgtagatggccttccattagcaattaaagcgttaggctcgtttttgt |
300 |
Q |
| |
|
|||||| ||||| |||||||||| ||||||||||||||||| ||| | ||||| |||||| ||||| |||||||| ||| ||| ||||| ||||||| |
|
|
| T |
13609571 |
agtgatgatatcttgagtggttatgcagacttgacatatgatgtactaaaatatgctgatggcattccactagcaattgaagtgttgggctcatttttgt |
13609670 |
T |
 |
| Q |
301 |
atggtcgaaatgtatctgaatggagaagtgcattggcaaaattaagagagaatccaaggacagatattatggatgtact |
379 |
Q |
| |
|
|||||||| |||| ||||||||||||||||||||||| | ||||||||||||||| | | |||| |||||||||||||| |
|
|
| T |
13609671 |
atggtcgagatgtctctgaatggagaagtgcattggccagattaagagagaatcccatggcagaaattatggatgtact |
13609749 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 151
Target Start/End: Original strand, 31561050 - 31561197
Alignment:
| Q |
4 |
ttcttgataatgttgatcatgttgaacaattggataaattggccatgacacgagaatgtctaggcacagggagtagaatcattgtaatttccagagacga |
103 |
Q |
| |
|
||||||||||||| ||||| |||| ||||||||| ||| | || || || ||||| |||| ||||||||||||| ||| | ||||| ||||| || |
|
|
| T |
31561050 |
ttcttgataatgtagatcaagttggacaattggaaaaaatagctgtgcgtcgtgaatggttaggtgcagggagtagaattattatcatttctagagatga |
31561149 |
T |
 |
| Q |
104 |
ccatatcttgagagagcatggagtagatgaagtttacaatgttccact |
151 |
Q |
| |
|
||||| |||| |||| ||||||| |||| ||||||||| |||||||| |
|
|
| T |
31561150 |
gcatatattgaaagagtatggagtggatgtagtttacaaagttccact |
31561197 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 259 - 337
Target Start/End: Complemental strand, 33389653 - 33389575
Alignment:
| Q |
259 |
atggccttccattagcaattaaagcgttaggctcgtttttgtatggtcgaaatgtatctgaatggagaagtgcattggc |
337 |
Q |
| |
|
|||| |||||| |||||||||||| || ||||| ||||||| |||||| ||||| ||||||||| ||||||||||| |
|
|
| T |
33389653 |
atggtcttccactagcaattaaagtattgggctcatttttgtttggtcgtaatgtgactgaatggaagagtgcattggc |
33389575 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 37
Target Start/End: Complemental strand, 9168613 - 9168580
Alignment:
| Q |
4 |
ttcttgataatgttgatcatgttgaacaattgga |
37 |
Q |
| |
|
||||||||||||||||||| |||||||||||||| |
|
|
| T |
9168613 |
ttcttgataatgttgatcaagttgaacaattgga |
9168580 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 271 - 335
Target Start/End: Complemental strand, 33059132 - 33059068
Alignment:
| Q |
271 |
tagcaattaaagcgttaggctcgtttttgtatggtcgaaatgtatctgaatggagaagtgcattg |
335 |
Q |
| |
|
|||||||||||| || ||||||||||||| |||||| ||||| ||||||||| ||||||||| |
|
|
| T |
33059132 |
tagcaattaaagtattgggctcgtttttgtttggtcgtaatgtgactgaatggaagagtgcattg |
33059068 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 70 - 154
Target Start/End: Complemental strand, 33306259 - 33306175
Alignment:
| Q |
70 |
cagggagtagaatcattgtaatttccagagacgaccatatcttgagagagcatggagtagatgaagtttacaatgttccactctt |
154 |
Q |
| |
|
|||| ||||||||| |||| ||||| ||||| || ||||| |||| ||| ||||||| |||| | ||||||| ||||||||||| |
|
|
| T |
33306259 |
caggtagtagaatcgttgtcatttctagagatgagcatatattgaaggagtatggagtggatgtattttacaaagttccactctt |
33306175 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 101; Significance: 6e-50; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 2 - 248
Target Start/End: Original strand, 14724600 - 14724843
Alignment:
| Q |
2 |
agttcttgataatgttgatcatgttgaacaattggataaattggccatgacacgagaatgtctaggcacagggagtagaatcattgtaatttccagagac |
101 |
Q |
| |
|
|||||||||||||||| || ||||||||| | || ||||||||||||| | || |||| ||||||||||| ||||||||||| ||||| || ||||| |
|
|
| T |
14724600 |
agttcttgataatgtt---caagttgaacaacttgaaaaattggccatgaaatgataatggctaggcacaggaagtagaatcatcgtaatatctagagat |
14724696 |
T |
 |
| Q |
102 |
gaccatatcttgagagagcatggagtagatgaagtttacaatgttccactcttagatcataataatgcccttcgattgttttgtaagaaagctttcaaaa |
201 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||||||| |||| |||| || |||||||| ||||||||| ||||||||||| ||||||||| |||| |
|
|
| T |
14724697 |
agccatatcttcagagagcatggagtagatgaagtttacaaagttcgactcataaatcataatgatgcccttcaattgttttgtaggaaagctttaaaaa |
14724796 |
T |
 |
| Q |
202 |
gtgattatatcatgagtggttacatagacttgacatatgatgcactc |
248 |
Q |
| |
|
||| || ||||||| ||||||||| ||| |||| |||||| |||| |
|
|
| T |
14724797 |
ttgacgatgtcatgagcggttacataaactcgacagatgatgtactc |
14724843 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 322 - 379
Target Start/End: Original strand, 14724899 - 14724956
Alignment:
| Q |
322 |
ggagaagtgcattggcaaaattaagagagaatccaaggacagatattatggatgtact |
379 |
Q |
| |
|
||||||||| |||||||| ||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
14724899 |
ggagaagtgtattggcaagattaagagagaatccaagggcagatattatggatgtact |
14724956 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 101; Significance: 6e-50; HSPs: 2)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 3 - 248
Target Start/End: Complemental strand, 17599168 - 17598919
Alignment:
| Q |
3 |
gttcttgataatgttgatcatgttgaacaattggataaattggccatgacacgagaatgtct----aggcacagggagtagaatcattgtaatttccaga |
98 |
Q |
| |
|
||||||||||||||| |||| ||||||||| |||| ||||||||||||| | ||||||| || ||||||| | ||||||||||| ||||| || ||| |
|
|
| T |
17599168 |
gttcttgataatgttcatcaagttgaacaactggaaaaattggccatgaaatgagaatggctggctaggcacaagaagtagaatcatcgtaatatctaga |
17599069 |
T |
 |
| Q |
99 |
gacgaccatatcttgagagagcatggagtagatgaagtttacaatgttccactcttagatcataataatgcccttcgattgttttgtaagaaagctttca |
198 |
Q |
| |
|
|| ||||||||| ||||||||||||||||||||||||||||| |||| |||| || |||||||| ||||||||| ||||||||||| ||||||||| | |
|
|
| T |
17599068 |
gatagccatatcttcagagagcatggagtagatgaagtttacaaagttcgactcataaatcataatgatgcccttcaattgttttgtaggaaagctttaa |
17598969 |
T |
 |
| Q |
199 |
aaagtgattatatcatgagtggttacatagacttgacatatgatgcactc |
248 |
Q |
| |
|
||| ||| || ||||||| ||||||||| ||| |||| |||||| |||| |
|
|
| T |
17598968 |
aaattgacgatgtcatgagcggttacataaactcgacagatgatgtactc |
17598919 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 322 - 379
Target Start/End: Complemental strand, 17598863 - 17598806
Alignment:
| Q |
322 |
ggagaagtgcattggcaaaattaagagagaatccaaggacagatattatggatgtact |
379 |
Q |
| |
|
||||||||| |||||||| ||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
17598863 |
ggagaagtgtattggcaagattaagagagaatccaagggcagatattatggatgtact |
17598806 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 70 - 151
Target Start/End: Original strand, 17439135 - 17439216
Alignment:
| Q |
70 |
cagggagtagaatcattgtaatttccagagacgaccatatcttgagagagcatggagtagatgaagtttacaatgttccact |
151 |
Q |
| |
|
|||| |||||||||||| | ||||| ||||| || ||||| |||| | || ||||||| |||| ||||||||| |||||||| |
|
|
| T |
17439135 |
caggtagtagaatcattatcatttctagagatgagcatatattgaaaaagtatggagtggatgtagtttacaaagttccact |
17439216 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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