View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20469_low_53 (Length: 259)
Name: NF20469_low_53
Description: NF20469
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20469_low_53 |
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Alignment Details
Target: chr1 (Bit Score: 227; Significance: 1e-125; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 12 - 242
Target Start/End: Complemental strand, 51360124 - 51359894
Alignment:
| Q |
12 |
gagatgaagatgacaagggcaaccttcgctaacttagtagagcaaattcgagaaggcataacagcatcatcttctccaacttctaacaactattccgatg |
111 |
Q |
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| T |
51360124 |
gagaagaagatgacaagggcaaccttcgctaacttagtagagcaaattcgagaaggcataacagcatcatcttctccaacttctaacaactattccgatg |
51360025 |
T |
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| Q |
112 |
acgaagttttgaatatccgcttccgtcgcatcatcctcaatcttctccacacttacttcctcccttcttccgccggattagagaaagaagtcggtgctgc |
211 |
Q |
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| T |
51360024 |
acgaagttttgaatatccgcttccgtcgcatcatcctcaatcttctccacacttacttcctcccttcttccgccggattagagaaagaagtcggtgctgc |
51359925 |
T |
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| Q |
212 |
agtcagactcatctcttacacggccaaaaat |
242 |
Q |
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||||||||||||||||||||||||||||||| |
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| T |
51359924 |
agtcagactcatctcttacacggccaaaaat |
51359894 |
T |
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