View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2046_high_21 (Length: 230)
Name: NF2046_high_21
Description: NF2046
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2046_high_21 |
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Alignment Details
Target: chr8 (Bit Score: 169; Significance: 9e-91; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 169; E-Value: 9e-91
Query Start/End: Original strand, 40 - 216
Target Start/End: Complemental strand, 33015034 - 33014858
Alignment:
| Q |
40 |
tacttcctagctttcttaaaaaacaaactctcctttttccacctcttcatatgagccatcacaaacacaatctccttcttaatcaacatcaacctcagcg |
139 |
Q |
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| T |
33015034 |
tacttcctagctttcttaaaaaacaaactctcctttttccacctcttcatatgcgccatcacaaacacaatctccttcttaatcaacatcaacctcagcg |
33014935 |
T |
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| Q |
140 |
tttcaatcaacggttcataaagatgatcatgatacaccacatccgaagctatcacaacatcaaactctcctccaatc |
216 |
Q |
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| T |
33014934 |
tttcaatcaacggttcataaagatgatcatgatacaccacatctgaagctatcacaacatcaaactctcctccaatc |
33014858 |
T |
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