View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2046_low_16 (Length: 299)
Name: NF2046_low_16
Description: NF2046
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2046_low_16 |
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Alignment Details
Target: chr2 (Bit Score: 220; Significance: 1e-121; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 24 - 280
Target Start/End: Original strand, 37769001 - 37769257
Alignment:
| Q |
24 |
actcaccggtgtttaattcgaagagtttatccaagtctaatgaaagccaatttgagaatcnnnnnnngttccattgcctaggaatatacatggtgtttct |
123 |
Q |
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| T |
37769001 |
actcaccggtgtttaattcgaagagtttatccaagtctaatgaaagccaatttgagaatcaaaaaaagttccattgcctaggaatatacatggtgtttct |
37769100 |
T |
|
| Q |
124 |
cataagcttagtagttacagtctgttggggtaaagttaatgtcattgttttgacatcaatgtttttctgttgtttttgtctttgtaacgcatgttctcgc |
223 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||| | |
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| T |
37769101 |
cataagcttagtagttacagtctgttggggtaaagttaatgtcattgttttgacatcaatgtttttctgttgtttttgtctttgcaacacatgttctcac |
37769200 |
T |
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| Q |
224 |
cagctaaaaagggttggtaaatctcgcaaagatgtgagttcaactcttgctgctggt |
280 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
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| T |
37769201 |
cagctaaaaagggttggtaaatctcgcaaagatgtgagttcaactctcgctgctggt |
37769257 |
T |
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