View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20470_low_14 (Length: 326)
Name: NF20470_low_14
Description: NF20470
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20470_low_14 |
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Alignment Details
Target: chr8 (Bit Score: 269; Significance: 1e-150; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 269; E-Value: 1e-150
Query Start/End: Original strand, 18 - 317
Target Start/End: Original strand, 33440757 - 33441057
Alignment:
| Q |
18 |
cacagccctattaattaaacatttgtttgtggttagattcagtgtattcatcattaaccaaatttcaccataaaccgacagagactaacatcatgtgaaa |
117 |
Q |
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| T |
33440757 |
cacagccctattaattaaacatttgtttgtggttagattgagtgtattcatcattaaccaaatttcaccataaaccgatagagactaacatcatgtgaaa |
33440856 |
T |
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| Q |
118 |
aatatgacaacacatagatttttctcaatcaccccacgattccagtaaagccacactcttcaaaagttaatattcgtcctacttaatataagagtacata |
217 |
Q |
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|||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33440857 |
gatattacaacacatagatttttctcagtcaccccacgattccagtaaagccacactcttcaaaagttaatattcgtcctacttaatataagagtacata |
33440956 |
T |
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| Q |
218 |
taaaagaaagaaaaaatttagacacaaacctatattggctc-aattgatggatcttgtgacgaagaacttgagtcaatatatatagtcttgatcttcatc |
316 |
Q |
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||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33440957 |
taaaagaaagaaaaaatttagacacaaacctatattgactctaattgatggatcttgtgacgaagaacttgagtcaatatatatagtcttgatcttcatc |
33441056 |
T |
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| Q |
317 |
t |
317 |
Q |
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| T |
33441057 |
t |
33441057 |
T |
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