View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20472_high_1_N (Length: 387)
Name: NF20472_high_1_N
Description: NF20472
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20472_high_1_N |
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Alignment Details
Target: chr7 (Bit Score: 358; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 358; E-Value: 0
Query Start/End: Original strand, 19 - 384
Target Start/End: Complemental strand, 47196306 - 47195941
Alignment:
| Q |
19 |
atgaacatttggtatgtatatctaattggtcatttcttattgaattttacagatgatgcttgactacaacgacttaatgaagattccggttgtcagcgat |
118 |
Q |
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| T |
47196306 |
atgaacatttggtatgtatatctaattggtcatttcttattgaattttacagatgatgcttgactacaacgacttaatgaagattccggttgtcagcgat |
47196207 |
T |
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| Q |
119 |
tacctcagagatgttaatcgagactcggttaagattaggtaattactcttcatctcaatttatgagatatgattttattcagtaagtcaaagaatgagta |
218 |
Q |
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| T |
47196206 |
tacctcagagatgttaatcgagactcggttaagattaggtaattactcttcatctcaatttatgagatatgattttattcagtaagtcaaagaatgagta |
47196107 |
T |
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| Q |
219 |
agatatatttttcaaccttcagagatgagaacagtggagaggttgcaaaccaaaatctgtcatttccagtggttctaccaaaaatgccgggtcgatttta |
318 |
Q |
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| T |
47196106 |
agatatatttttcaaccttcagagatgagaaaagtggagaggttgcaaaccaaaatctgtcatttccagtggttctaccaaaaatgccgggtcgatttta |
47196007 |
T |
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| Q |
319 |
ctatctatttggtaagcctataagaatgaaaggcatggagaatatactaaaagacaaagaaaatgc |
384 |
Q |
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| T |
47196006 |
ctatctatttggtaagcctataagaatgaaaggcatggaggatatactaaaagacaaagaaaatgc |
47195941 |
T |
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