View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20472_low_2 (Length: 333)
Name: NF20472_low_2
Description: NF20472
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20472_low_2 |
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Alignment Details
Target: chr7 (Bit Score: 318; Significance: 1e-179; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 318; E-Value: 1e-179
Query Start/End: Original strand, 1 - 322
Target Start/End: Original strand, 47195985 - 47196306
Alignment:
| Q |
1 |
tataggcttaccaaatagatagtaaaatcgacccggcatttttggtagaaccactggaaatgacagattttggtttgcaacctctccactgttctcatct |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
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| T |
47195985 |
tataggcttaccaaatagatagtaaaatcgacccggcatttttggtagaaccactggaaatgacagattttggtttgcaacctctccacttttctcatct |
47196084 |
T |
|
| Q |
101 |
ctgaaggttgaaaaatatatcttactcattctttgacttactgaataaaatcatatctcataaattgagatgaagagtaattacctaatcttaaccgagt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
47196085 |
ctgaaggttgaaaaatatatcttactcattctttgacttactgaataaaatcatatctcataaattgagatgaagagtaattacctaatcttaaccgagt |
47196184 |
T |
|
| Q |
201 |
ctcgattaacatctctgaggtaatcgctgacaaccggaatcttcattaagtcgttgtagtcaagcatcatctgtaaaattcaataagaaatgaccaatta |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
47196185 |
ctcgattaacatctctgaggtaatcgctgacaaccggaatcttcattaagtcgttgtagtcaagcatcatctgtaaaattcaataagaaatgaccaatta |
47196284 |
T |
|
| Q |
301 |
gatatacataccaaatgttcat |
322 |
Q |
| |
|
|||||||||||||||||||||| |
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| T |
47196285 |
gatatacataccaaatgttcat |
47196306 |
T |
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