View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20473_high_37 (Length: 241)
Name: NF20473_high_37
Description: NF20473
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20473_high_37 |
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Alignment Details
Target: chr2 (Bit Score: 229; Significance: 1e-126; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 10648525 - 10648753
Alignment:
| Q |
1 |
cagcgtctcacaaaatcaaacaaacgagtctacagtgacatacatggtaaaagaacatcaaggggaagaaccggtaagaaatgatagacattttgaagtc |
100 |
Q |
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| T |
10648525 |
cagcgtctcacaaaatcaaacaaacgagtctacagtgacatacatggtaaaagaacatcaaggggaagaaccggtaagaaatgatagacattttgaagtc |
10648624 |
T |
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| Q |
101 |
atgtatgataaagcattaaccgaagtacgttgcatttgtaattgctttaacttcaaaggctacctatgcaggcatgccttgtatatccttaattacaatg |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
10648625 |
atgtatgataaagcattaaccgaagtacgttgcatttgtaattgctttaacttcaaaggctacctatgcaggcatgccttgtatatccttaattacaatg |
10648724 |
T |
|
| Q |
201 |
gtgtgggggaaattccatgtcattatatt |
229 |
Q |
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||||||||||||||||||||||||||||| |
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| T |
10648725 |
gtgtgggggaaattccatgtcattatatt |
10648753 |
T |
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