View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20474_low_6 (Length: 376)

Name: NF20474_low_6
Description: NF20474
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20474_low_6
NF20474_low_6
[»] chr1 (8 HSPs)
chr1 (233-351)||(31771310-31771428)
chr1 (233-355)||(7608318-7608440)
chr1 (287-360)||(7608244-7608317)
chr1 (287-360)||(31771232-31771305)
chr1 (233-290)||(1721556-1721613)
chr1 (223-290)||(17726023-17726089)
chr1 (232-277)||(32440659-32440704)
chr1 (232-290)||(22368196-22368254)
[»] chr3 (7 HSPs)
chr3 (1-138)||(37531972-37532105)
chr3 (132-220)||(11427105-11427193)
chr3 (228-307)||(19766009-19766088)
chr3 (222-277)||(11394007-11394062)
chr3 (244-329)||(31687881-31687966)
chr3 (233-277)||(46233973-46234017)
chr3 (227-290)||(52130783-52130846)
[»] scaffold0152 (1 HSPs)
scaffold0152 (233-329)||(10195-10291)
[»] chr2 (5 HSPs)
chr2 (219-290)||(997806-997877)
chr2 (232-307)||(4453777-4453852)
chr2 (232-277)||(9208569-9208614)
chr2 (228-267)||(7161811-7161850)
chr2 (223-286)||(3625169-3625234)
[»] chr4 (5 HSPs)
chr4 (223-290)||(32651267-32651334)
chr4 (223-307)||(38467690-38467775)
chr4 (235-307)||(3649873-3649945)
chr4 (225-288)||(41810163-41810226)
chr4 (233-268)||(26720237-26720272)
[»] scaffold0003 (2 HSPs)
scaffold0003 (233-329)||(36966-37062)
scaffold0003 (228-268)||(43199-43239)
[»] chr6 (3 HSPs)
chr6 (222-267)||(31444760-31444805)
chr6 (228-268)||(27444122-27444162)
chr6 (227-275)||(33054175-33054223)
[»] scaffold0014 (1 HSPs)
scaffold0014 (226-268)||(32608-32650)
[»] chr8 (2 HSPs)
chr8 (233-307)||(44663663-44663737)
chr8 (233-307)||(35348991-35349066)
[»] chr7 (2 HSPs)
chr7 (228-277)||(16262692-16262741)
chr7 (233-275)||(21820186-21820228)


Alignment Details
Target: chr1 (Bit Score: 107; Significance: 1e-53; HSPs: 8)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 233 - 351
Target Start/End: Complemental strand, 31771428 - 31771310
Alignment:
Q  233 atctaacttattcctaatcctagttaacactccaaataacactcccaaccctaattctcctattttaggtgccaacaaacctcagcccttggatctaatc 332  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  31771428 atctaacttattcctaatcctagttaacactccaaataacactcccaaccctaattctcctgttttaggcgccaacaaacctcagcccttggatctaatc 31771329  T
Q  333 tgtttgccattttttcctc 351  Q
    ||||||| |||||||||||    
T  31771328 tgtttgcaattttttcctc 31771310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 233 - 355
Target Start/End: Complemental strand, 7608440 - 7608318
Alignment:
Q  233 atctaacttattcctaatcctagttaacactccaaataacactcccaaccctaattctcctattttaggtgccaacaaacctcagcccttggatctaatc 332  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||| ||||||||| ||||||||||||||||||||    
T  7608440 atctaacttattcctaatcctagttaaaactccaaataacactcccaaccctaattctcctgttttaggcgccaacaaatctcagcccttggatctaatc 7608341  T
Q  333 tgtttgccattttttcctccttt 355  Q
    ||||||| |||||||||||||||    
T  7608340 tgtttgcaattttttcctccttt 7608318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 287 - 360
Target Start/End: Complemental strand, 7608317 - 7608244
Alignment:
Q  287 ttctcctattttaggtgccaacaaacctcagcccttggatctaatctgtttgccattttttcctcctttcttac 360  Q
    ||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7608317 ttctcctgttttaggcgccaacaaacctcagcccttggatctaatctgtttgccattttttcctcctttcttac 7608244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 287 - 360
Target Start/End: Complemental strand, 31771305 - 31771232
Alignment:
Q  287 ttctcctattttaggtgccaacaaacctcagcccttggatctaatctgtttgccattttttcctcctttcttac 360  Q
    ||||||| ||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  31771305 ttctcctgttttaggcgccaacaaacctcagcccttggatctaatctgtttgccagtttttcctcctttcttac 31771232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 233 - 290
Target Start/End: Original strand, 1721556 - 1721613
Alignment:
Q  233 atctaacttattcctaatcctagttaacactccaaataacactcccaaccctaattct 290  Q
    |||||||||||||||||||||| |||||||||||| |||| || ||||||||||||||    
T  1721556 atctaacttattcctaatcctaattaacactccaattaacgctgccaaccctaattct 1721613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 223 - 290
Target Start/End: Original strand, 17726023 - 17726089
Alignment:
Q  223 atctaatctaatctaacttattcctaatcctagttaacactccaaataacactcccaaccctaattct 290  Q
    |||||||||||||||| |||||||||||||||||||||||||||| || ||||   ||||||||||||    
T  17726023 atctaatctaatctaa-ttattcctaatcctagttaacactccaattatcacttaaaaccctaattct 17726089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 232 - 277
Target Start/End: Complemental strand, 32440704 - 32440659
Alignment:
Q  232 aatctaacttattcctaatcctagttaacactccaaataacactcc 277  Q
    |||||||||||||||||||||||||||||||||||| || ||||||    
T  32440704 aatctaacttattcctaatcctagttaacactccaattatcactcc 32440659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 232 - 290
Target Start/End: Complemental strand, 22368254 - 22368196
Alignment:
Q  232 aatctaacttattcctaatcctagttaacactccaaataacactcccaaccctaattct 290  Q
    |||||||||||||||||||||||||||||||| ||| || ||||   ||||||||||||    
T  22368254 aatctaacttattcctaatcctagttaacacttcaattatcacttaaaaccctaattct 22368196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 100; Significance: 2e-49; HSPs: 7)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 37532105 - 37531972
Alignment:
Q  1 gacaagatcttgatttgttttctttacaggtacaattaaaagtcctgtctatattgttctgcaagttgattgtgttttctactttgattgtatttatgga 100  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||| |    
T  37532105 gacaagatcttgatttgttttctatacaggtacaattaaaagtcctgtctatattgttctgcaagttgattgtg-tttctattttgattgtatttatgaa 37532007  T
Q  101 tcaaatgagttagcatgcctttttatgattcctaattt 138  Q
    |||||||||||||||||   |||| |||||||||||||    
T  37532006 tcaaatgagttagcatg---ttttgtgattcctaattt 37531972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 132 - 220
Target Start/End: Complemental strand, 11427193 - 11427105
Alignment:
Q  132 ctaatttaatttgaagctgattttagggagcatacatcattttcatagtatcaagatgcaaaactaattacattttgcaatcaggtaat 220  Q
    |||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  11427193 ctaatttaatttgaaggtgattttagggagcatacatcattttcatggtatcaagatgcaaaactaattatattttgcaatcaggtaat 11427105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 228 - 307
Target Start/End: Original strand, 19766009 - 19766088
Alignment:
Q  228 atctaatctaacttattcctaatcctagttaacactccaaataacactcccaaccctaattctcctattttaggtgccaa 307  Q
    ||||||||||||||||| |||||||||||||||||||||| ||||||||| ||||||||| || || ||||||| |||||    
T  19766009 atctaatctaacttatttctaatcctagttaacactccaattaacactccaaaccctaatcctacttttttaggcgccaa 19766088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 222 - 277
Target Start/End: Original strand, 11394007 - 11394062
Alignment:
Q  222 tatctaatctaatctaacttattcctaatcctagttaacactccaaataacactcc 277  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| || ||||||    
T  11394007 tatctaatctaatctaacttatttctaatcctagttaacactccaattatcactcc 11394062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 244 - 329
Target Start/End: Original strand, 31687881 - 31687966
Alignment:
Q  244 tcctaatcctagttaacactccaaataacactcccaaccctaattctcctattttaggtgcc-aacaaacctcagcccttggatcta 329  Q
    ||||| |||||||||||||||||| | ||||||| |||||||||||| || ||||||| ||| ||||| ||| ||||||||||||||    
T  31687881 tcctagtcctagttaacactccaacttacactccaaaccctaattctacttttttaggcgccaaacaatcct-agcccttggatcta 31687966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 233 - 277
Target Start/End: Complemental strand, 46234017 - 46233973
Alignment:
Q  233 atctaacttattcctaatcctagttaacactccaaataacactcc 277  Q
    ||||||||||||||||||||||||||||||||||| || ||||||    
T  46234017 atctaacttattcctaatcctagttaacactccaattatcactcc 46233973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 227 - 290
Target Start/End: Original strand, 52130783 - 52130846
Alignment:
Q  227 aatctaatctaacttattcctaatcctagttaacactccaaataacactcccaaccctaattct 290  Q
    |||||| ||||||||||| |||||||||| ||||||||||| || ||||   ||||||||||||    
T  52130783 aatctagtctaacttatttctaatcctaggtaacactccaattaccacttaaaaccctaattct 52130846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152 (Bit Score: 54; Significance: 6e-22; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 233 - 329
Target Start/End: Original strand, 10195 - 10291
Alignment:
Q  233 atctaacttattcctaatcctagttaacactccaaataacactcccaaccctaattctcctattttaggtgcc-aacaaacctcagcccttggatcta 329  Q
    |||||||||||||| |||||||||||||||||||| ||||||||| |||||||||||| || ||||||| ||| ||||| ||| ||||||||||||||    
T  10195 atctaacttattcccaatcctagttaacactccaattaacactccaaaccctaattctacttttttaggcgccaaacaatcct-agcccttggatcta 10291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 52; Significance: 1e-20; HSPs: 5)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 219 - 290
Target Start/End: Original strand, 997806 - 997877
Alignment:
Q  219 atctatctaatctaatctaacttattcctaatcctagttaacactccaaataacactcccaaccctaattct 290  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||| || | || ||||||||||||||    
T  997806 atctatctaatctaatctaacttattcctaatcctagttaacacttcaattagccctgccaaccctaattct 997877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 232 - 307
Target Start/End: Original strand, 4453777 - 4453852
Alignment:
Q  232 aatctaacttattcctaatcctagttaacactccaaataacactcccaaccctaattctcctattttaggtgccaa 307  Q
    |||||||||||||||||||||||||||||||||||| || ||||   ||||||||||||   |||||||| |||||    
T  4453777 aatctaacttattcctaatcctagttaacactccaattaccacttaaaaccctaattctatgattttaggcgccaa 4453852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 232 - 277
Target Start/End: Original strand, 9208569 - 9208614
Alignment:
Q  232 aatctaacttattcctaatcctagttaacactccaaataacactcc 277  Q
    |||||||||||||||||||||||||||||||||||| || ||||||    
T  9208569 aatctaacttattcctaatcctagttaacactccaattatcactcc 9208614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 228 - 267
Target Start/End: Original strand, 7161811 - 7161850
Alignment:
Q  228 atctaatctaacttattcctaatcctagttaacactccaa 267  Q
    ||||||||||||||||| ||||||||||||||||||||||    
T  7161811 atctaatctaacttatttctaatcctagttaacactccaa 7161850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 223 - 286
Target Start/End: Original strand, 3625169 - 3625234
Alignment:
Q  223 atctaatctaa--tctaacttattcctaatcctagttaacactccaaataacactcccaaccctaa 286  Q
    |||||||||||  ||||||||||||||||||||| |||||||||||| ||||  | ||||||||||    
T  3625169 atctaatctaacttctaacttattcctaatcctaattaacactccaattaaccatgccaaccctaa 3625234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 48; Significance: 2e-18; HSPs: 5)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 223 - 290
Target Start/End: Complemental strand, 32651334 - 32651267
Alignment:
Q  223 atctaatctaatctaacttattcctaatcctagttaacactccaaataacactcccaaccctaattct 290  Q
    ||||||||||||||||||||||||||||||||||||||||||||| || ||||   ||||||||||||    
T  32651334 atctaatctaatctaacttattcctaatcctagttaacactccaattatcacttaaaaccctaattct 32651267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 223 - 307
Target Start/End: Complemental strand, 38467775 - 38467690
Alignment:
Q  223 atctaatctaatctaacttattcctaatcctagttaacactccaaataacactcccaaccctaattct-cctattttaggtgccaa 307  Q
    ||||||||||||||||||||||  ||||||||||||||||||||| |||||||   |||||||||||| | ||||||||| |||||    
T  38467775 atctaatctaatctaacttatttataatcctagttaacactccaattaacacttaaaaccctaattctacttattttaggcgccaa 38467690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 235 - 307
Target Start/End: Original strand, 3649873 - 3649945
Alignment:
Q  235 ctaacttattcctaatcctagttaacactccaaataacactcccaaccctaattctcctattttaggtgccaa 307  Q
    ||||||||||||||||||||||||||||||||| |||||||   |||||||| ||| || ||||||| |||||    
T  3649873 ctaacttattcctaatcctagttaacactccaattaacacttaaaaccctaaatctacttttttaggcgccaa 3649945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 225 - 288
Target Start/End: Original strand, 41810163 - 41810226
Alignment:
Q  225 ctaatctaatctaacttattcctaatcctagttaacactccaaataacactcccaaccctaatt 288  Q
    |||||||||||||||||||| |||||||||||||||||||||| || ||||   ||||||||||    
T  41810163 ctaatctaatctaacttatttctaatcctagttaacactccaattaccacttaaaaccctaatt 41810226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 233 - 268
Target Start/End: Original strand, 26720237 - 26720272
Alignment:
Q  233 atctaacttattcctaatcctagttaacactccaaa 268  Q
    ||||||||||||||||||||||||||||||||||||    
T  26720237 atctaacttattcctaatcctagttaacactccaaa 26720272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 46; Significance: 4e-17; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 233 - 329
Target Start/End: Complemental strand, 37062 - 36966
Alignment:
Q  233 atctaacttattcctaatcctagttaacactccaaataacactcccaaccctaattctcctattttaggtgcc-aacaaacctcagcccttggatcta 329  Q
    |||||||||||||||||||||| |||||||||||| ||||||| | || ||||||||| || ||||||| ||| ||||| ||| ||||||||||||||    
T  37062 atctaacttattcctaatcctaattaacactccaattaacacttcaaatcctaattcttcttttttaggcgccaaacaatcct-agcccttggatcta 36966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 228 - 268
Target Start/End: Complemental strand, 43239 - 43199
Alignment:
Q  228 atctaatctaacttattcctaatcctagttaacactccaaa 268  Q
    |||||||||||||||||||||||| ||||||||||||||||    
T  43239 atctaatctaacttattcctaatcgtagttaacactccaaa 43199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 46; Significance: 4e-17; HSPs: 3)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 222 - 267
Target Start/End: Original strand, 31444760 - 31444805
Alignment:
Q  222 tatctaatctaatctaacttattcctaatcctagttaacactccaa 267  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  31444760 tatctaatctaatctaacttattcctaatcctagttaacactccaa 31444805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 228 - 268
Target Start/End: Original strand, 27444122 - 27444162
Alignment:
Q  228 atctaatctaacttattcctaatcctagttaacactccaaa 268  Q
    |||||||||||||||||||||||| ||||||||||||||||    
T  27444122 atctaatctaacttattcctaatcgtagttaacactccaaa 27444162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 227 - 275
Target Start/End: Complemental strand, 33054223 - 33054175
Alignment:
Q  227 aatctaatctaacttattcctaatcctagttaacactccaaataacact 275  Q
    |||||||||||||||||||||||||||| |||||||| ||| |||||||    
T  33054223 aatctaatctaacttattcctaatcctaattaacactacaattaacact 33054175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 226 - 268
Target Start/End: Original strand, 32608 - 32650
Alignment:
Q  226 taatctaatctaacttattcctaatcctagttaacactccaaa 268  Q
    ||||||||||||||||||| |||||||||||||||||||||||    
T  32608 taatctaatctaacttatttctaatcctagttaacactccaaa 32650  T

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Target: chr8 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 2)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 233 - 307
Target Start/End: Complemental strand, 44663737 - 44663663
Alignment:
Q  233 atctaacttattcctaatcctagttaacactccaaataacactcccaaccctaattctcctattttaggtgccaa 307  Q
    ||||||||||||||||||||||||||||||||||| || ||||   ||||||||||||   |||||||| |||||    
T  44663737 atctaacttattcctaatcctagttaacactccaattaccacttaaaaccctaattctatgattttaggcgccaa 44663663  T

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Target: chr8; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 233 - 307
Target Start/End: Original strand, 35348991 - 35349066
Alignment:
Q  233 atctaacttattcctaatcctagttaacactccaaataacactcccaaccctaattct-cctattttaggtgccaa 307  Q
    |||||||||||| |||||||||||||||||||||| |||||||   || ||||||||| | ||||||||| |||||    
T  35348991 atctaacttatttctaatcctagttaacactccaattaacacttaaaatcctaattctacttattttaggcgccaa 35349066  T

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Target: chr7 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 228 - 277
Target Start/End: Complemental strand, 16262741 - 16262692
Alignment:
Q  228 atctaatctaacttattcctaatcctagttaacactccaaataacactcc 277  Q
    |||||||||||||||||||||||||||||||||||| ||| || ||||||    
T  16262741 atctaatctaacttattcctaatcctagttaacacttcaattatcactcc 16262692  T

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Target: chr7; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 233 - 275
Target Start/End: Complemental strand, 21820228 - 21820186
Alignment:
Q  233 atctaacttattcctaatcctagttaacactccaaataacact 275  Q
    |||||||||||||||||||||| |||||||||||| |||||||    
T  21820228 atctaacttattcctaatcctaattaacactccaattaacact 21820186  T

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