View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20477_high_28 (Length: 271)
Name: NF20477_high_28
Description: NF20477
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20477_high_28 |
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Alignment Details
Target: chr7 (Bit Score: 194; Significance: 1e-105; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 18 - 252
Target Start/End: Original strand, 36526505 - 36526739
Alignment:
| Q |
18 |
atatgccataaatatcaaggtaaagataaaagtatttagtttatacaacacataaaaaagtcttnnnnnnntaaagagagaatgatcaagaaattcaaca |
117 |
Q |
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| T |
36526505 |
atatgccataaatatcaaggtaaagataaaagtatttattttatacaacacataaaaaagtcttaaaaaaataaagagaaaatgatcaagaaattcaaca |
36526604 |
T |
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| Q |
118 |
tgtaggagggtaattctacaattatttgagcttatccaagatgccaaaactgaatttgagaaacacaaatgatataaggatcagagaaaattagctatgg |
217 |
Q |
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||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
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| T |
36526605 |
tgtaggagggtcattctacaattgtttgagcttatccaagatgccaaaactgaatttgagaaacacaaatgatataaggatcggagaaaattagctatgg |
36526704 |
T |
|
| Q |
218 |
agtttttacttatagaagcacattgtgagacatga |
252 |
Q |
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||||||||||||||||||||||||||||||||||| |
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| T |
36526705 |
agtttttacttatagaagcacattgtgagacatga |
36526739 |
T |
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