View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20479_high_53 (Length: 338)
Name: NF20479_high_53
Description: NF20479
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20479_high_53 |
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Alignment Details
Target: chr7 (Bit Score: 301; Significance: 1e-169; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 301; E-Value: 1e-169
Query Start/End: Original strand, 10 - 322
Target Start/End: Original strand, 5836494 - 5836806
Alignment:
| Q |
10 |
tcatcaacttctccactaaacaaatatccattattagccacttgattatgatcattgctaatgttgttgttactattgttattgttgttctttagaggat |
109 |
Q |
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| T |
5836494 |
tcatcaacttctccactaaacaaatatccattattagccacttgattatgatcattgctaatgttgttgttactattgttattgttgttctttagaggat |
5836593 |
T |
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| Q |
110 |
tcaacaaaagccatgaagctgcttcattttcatcttccatatcatgatcaacaccttcatcctcctcttcctccacctcacagccaccgcggacgaagcc |
209 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
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| T |
5836594 |
tcaacaaaagccatgaagctgcttcattttcatcttccatatcatgatcaacaccttcatcctcctcttcctccacctcacaaccaccgcggacgaagcc |
5836693 |
T |
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| Q |
210 |
ttcattatcggcacctaaaagggtggccggaggaccgtataggtaaccggaaattggaagaatcgggacacgttggtggcggcttgcaagagggttagca |
309 |
Q |
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| T |
5836694 |
ttcatcttcggcacctaaaagggtggccggaggaccgtataggtaaccggaaattggaagaatcgggacacgttggtggcggcttgcaagagggttagca |
5836793 |
T |
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| Q |
310 |
gagtggatatcag |
322 |
Q |
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| T |
5836794 |
gagtggatatcag |
5836806 |
T |
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