View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF20479_low_3 (Length: 710)
Name: NF20479_low_3
Description: NF20479
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20479_low_3 |
 | |
|
| [»] chr7 (9 HSPs) |
| |
|
| [»] scaffold0242 (4 HSPs) |
| | |
|
Alignment Details
Target: chr7 (Bit Score: 619; Significance: 0; HSPs: 9)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 619; E-Value: 0
Query Start/End: Original strand, 1 - 710
Target Start/End: Complemental strand, 29477451 - 29476727
Alignment:
| Q |
1 |
attaggcttccttactgtccaaaccgattcatttgtatatgagacctatttaggtttcatcctcaacgccgccaccccactgcgtttccacgatcatgac |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
29477451 |
attaggcttccttactgtccaaaccgattcatttgtatatgagacctattttggtttcatcctcaacgccgccaccccactgcgtttccacgatcatgac |
29477352 |
T |
|
| Q |
101 |
tccggtgacgccggtggtccttcctgacgatctcatcgcagagttactttccttccttcccgtcaaatctcttgttcgactcaaatgtgttagcaagtct |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
29477351 |
tccggtgacgccggtggtccttcctgacgatctcatcgcagagttactttccttccttcccgtcaaatctcttgttcgactcaaatgtgttagcaagtct |
29477252 |
T |
|
| Q |
201 |
tggaaatccttaatctctgatcccacctttgtgaaattacacctcaatcgatcttcaacaagaaattcactcttcacaataggcacgctgcacgtcgcag |
300 |
Q |
| |
|
||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||| |
|
|
| T |
29477251 |
tggaaatccctaatctctgatcccagctttgtgaaattacacctcaatcgatcttcaacaagaaatccactcttcacaataggcacgctgcacatcgcag |
29477152 |
T |
|
| Q |
301 |
ctatccccatcg---------------atgatgttgacggcgttggattggaggtgggttacagtgtcgttccttactcgttaaacggtttaattcaaaa |
385 |
Q |
| |
|
|||||||||||| |||||||||||| | ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
29477151 |
ctatccccatcgcagctatccccatcgatgatgttgacgaccgtggattggaggtgggttacagtgtcgttccttactcgttaaactgtttaattcaaaa |
29477052 |
T |
|
| Q |
386 |
cccgttgttcaccctttcggtcgatccttaccatcatttgggtgataaagaatgttctttaatgattggtagctgcaatggattgattcttttggctggc |
485 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
29477051 |
cccgttgttcaccctttcggtcgatccttaccatcatttgggtgataaagaatgttctttaatgattggtagctgcaatggattgattcttttggctggc |
29476952 |
T |
|
| Q |
486 |
ggtgattctcaattgggatattttcgtctatggaacccagccacaatgacaatatctccaaattttgggtattttgtccgtttccacagcagtgcaaccc |
585 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
29476951 |
ggtgattctcaattgggatattttcgtctatggaacccagccacaatgacaatatctccaaattttgggtattttgtccgtttccatggcagtgcaaccc |
29476852 |
T |
|
| Q |
586 |
accctttcccgtttcttttctattacaatttcacctttggatgtgataattctactggcacatataagatagtggcatccaattacaatccagatcgaca |
685 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
29476851 |
accctttcccgtttcttggctattacaatttcacctttggatgtgataattctactggcacttataagatagtggcatccaattacaatccagatcgaca |
29476752 |
T |
|
| Q |
686 |
acacagaatgaatgtgagaattctc |
710 |
Q |
| |
|
||||||||||||||||||||||||| |
|
|
| T |
29476751 |
acacagaatgaatgtgagaattctc |
29476727 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 106 - 558
Target Start/End: Complemental strand, 29480469 - 29480018
Alignment:
| Q |
106 |
tgacgccggtggtccttcctgacgatctcatcgcagagttactttccttccttcccgtcaaatctcttgttcgactcaaatgtgttagcaagtcttggaa |
205 |
Q |
| |
|
|||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||| ||||||| |||| ||||| | ||||||||||| |
|
|
| T |
29480469 |
tgacgccggtggtccttcctgatgatctcatcacagagttactttccttccttcccgtcaaatctcctgttcgattcaagtgtgtctgtaagtcttggaa |
29480370 |
T |
|
| Q |
206 |
atccttaatctctgatcccacctttgtgaaattacacctcaatcgatcttcaacaagaaattcactcttcacaataggcacgctgcacgtcgcagctatc |
305 |
Q |
| |
|
| || |||| || |||||| |||||| |||||||||||||||| ||| |||||| ||||| | ||||||||| ||| ||| |||||| ||||| |||| |
|
|
| T |
29480369 |
aaccctaatttccaatcccaactttgtaaaattacacctcaatcaatcctcaacacgaaatcccctcttcacactagtcacactgcacttcgcaattatc |
29480270 |
T |
|
| Q |
306 |
cc--catcgatgatgttgacggcgttggattggaggtgggttacagtgtcgttccttactcgttaaacggtttaattcaaaacccgttgttcaccctttc |
403 |
Q |
| |
|
|| |||||| |||| || | |||||||||| |||||| ||||||||||||||||||||| ||| |||||||| | |||||||||||||||||||| |
|
|
| T |
29480269 |
ccatcatcgaagatg---accaccatggattggagatgggtttcagtgtcgttccttactcgttgaacagtttaattgagaacccgttgttcaccctttc |
29480173 |
T |
|
| Q |
404 |
ggtcgatccttaccatcatttgggtgataaagaatgttctttaatgattggtagctgcaatggattgattcttttggctggcggtgattctcaattggga |
503 |
Q |
| |
|
|| ||||| ||| |||||||| |||||||| |||| || | ||| ||| || |||||||||||||||||||||||||||||||||||| ||||| | | |
|
|
| T |
29480172 |
cgtagatccgtactatcatttgagtgataaacaatgctcctgtatggttgatacctgcaatggattgattcttttggctggcggtgattcacaatttgaa |
29480073 |
T |
|
| Q |
504 |
tattttcgtctatggaacccagccacaatgacaatatctccaaattttgggtatt |
558 |
Q |
| |
|
||||||| ||||||||||||||| |||||| ||| ||||||||||||| |||| |
|
|
| T |
29480072 |
tattttcatctatggaacccagcaacaatggaaattcctccaaattttggctatt |
29480018 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 113 - 253
Target Start/End: Original strand, 29894513 - 29894653
Alignment:
| Q |
113 |
ggtggtccttcctgacgatctcatcgcagagttactttccttccttcccgtcaaatctcttgttcgactcaaatgtgttagcaagtcttggaaatcctta |
212 |
Q |
| |
|
|||||| || ||||||||||||||| || |||||||||| ||||| || | ||||||||||||| ||| ||||||||||||||||||||| || || |
|
|
| T |
29894513 |
ggtggttctccctgacgatctcatcttcaagatactttccttacttccggttatatctcttgttcgattcacttgtgttagcaagtcttggaaaacccta |
29894612 |
T |
|
| Q |
213 |
atctctgatcccacctttgtgaaattacacctcaatcgatc |
253 |
Q |
| |
|
|||| |||||||||||| || ||||||||||||||| |||| |
|
|
| T |
29894613 |
atctttgatcccaccttcgtcaaattacacctcaatagatc |
29894653 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 347 - 491
Target Start/End: Complemental strand, 29446400 - 29446256
Alignment:
| Q |
347 |
cagtgtcgttccttactcgttaaacggtttaattcaaaacccgttgttcaccctttcggtcgatccttaccatcatttgggtgataaagaatgttcttta |
446 |
Q |
| |
|
||||||| ||||||||||||| || |||||||||| || | | ||||| ||||| || ||||||||| |||||||| | || ||| |||||||| |
|
|
| T |
29446400 |
cagtgtcattccttactcgtttaatcgtttaattcagaattcatctttcactctttccgtggatccttactatcatttgagctatcaaggatgttcttct |
29446301 |
T |
|
| Q |
447 |
atgattggtagctgcaatggattgattcttttggctggcggtgat |
491 |
Q |
| |
|
|| |||||| ||||||||| |||||||||||||||||||||||| |
|
|
| T |
29446300 |
atagttggtaactgcaatggtttgattcttttggctggcggtgat |
29446256 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 129 - 247
Target Start/End: Complemental strand, 29446612 - 29446494
Alignment:
| Q |
129 |
gatctcatcgcagagttactttccttccttcccgtcaaatctcttgttcgactcaaatgtgttagcaagtcttggaaatccttaatctctgatcccacct |
228 |
Q |
| |
|
||||||||||| ||| | |||||||||||||||||||||||||||||||| |||| ||||| | |||| ||||||| || ||| || ||| ||||| |
|
|
| T |
29446612 |
gatctcatcgccgaggttttttccttccttcccgtcaaatctcttgttcgattcaagtgtgtcaataagtattggaaaacccgaatttccgataacacct |
29446513 |
T |
|
| Q |
229 |
ttgtgaaattacacctcaa |
247 |
Q |
| |
|
| || |||||||||||||| |
|
|
| T |
29446512 |
tcgtcaaattacacctcaa |
29446494 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 126 - 247
Target Start/End: Complemental strand, 29923015 - 29922894
Alignment:
| Q |
126 |
gacgatctcatcgcagagttactttccttccttcccgtcaaatctcttgttcgactcaaatgtgttagcaagtcttggaaatccttaatctctgatccca |
225 |
Q |
| |
|
|||||||||||||| || |||||||||| ||||| || ||| ||||| ||||| |||| ||||||| |||||||||||| | ||||| ||||||| |
|
|
| T |
29923015 |
gacgatctcatcgctgaagtactttcctttcttccggtgaaacctcttcttcgattcaagagtgttagtaagtcttggaaaatactcatctccgatccca |
29922916 |
T |
|
| Q |
226 |
cctttgtgaaattacacctcaa |
247 |
Q |
| |
|
| || |||||||| |||||||| |
|
|
| T |
29922915 |
cattcgtgaaattgcacctcaa |
29922894 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 244
Target Start/End: Complemental strand, 19638065 - 19638002
Alignment:
| Q |
181 |
tcaaatgtgttagcaagtcttggaaatccttaatctctgatcccacctttgtgaaattacacct |
244 |
Q |
| |
|
|||||||||| ||||||| |||||| || | |||||||||||||| ||||| ||||||||||| |
|
|
| T |
19638065 |
tcaaatgtgtctgcaagtcatggaaaaccatcatctctgatcccacttttgtcaaattacacct |
19638002 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 113 - 248
Target Start/End: Complemental strand, 29436595 - 29436460
Alignment:
| Q |
113 |
ggtggtccttcctgacgatctcatcgcagagttactttccttccttcccgtcaaatctcttgttcgactcaaatgtgttagcaagtcttggaaatcctta |
212 |
Q |
| |
|
|||||| || ||||||||||||||| | ||| ||||| | || |||||||| ||||| || ||| | | | |||||| || |||||||||||||| || |
|
|
| T |
29436595 |
ggtggttctccctgacgatctcatcaccgagatacttccgtttcttcccgttaaatccattcttcaatttagatgtgtcagtgagtcttggaaatcccta |
29436496 |
T |
|
| Q |
213 |
atctctgatcccacctttgtgaaattacacctcaat |
248 |
Q |
| |
|
| || ||||| | ||||||||||||||||||||| |
|
|
| T |
29436495 |
acttccaatccctcttttgtgaaattacacctcaat |
29436460 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 29480560 - 29480479
Alignment:
| Q |
1 |
attaggcttccttactgtccaaaccgattcatttgtatatgagacctatttaggtttcatcctcaacgccgccaccccactgcgt |
85 |
Q |
| |
|
|||||||||||| ||| ||||||||| ||||||| || ||| |||||| | ||||||||||||||||| ||||||||||||| |
|
|
| T |
29480560 |
attaggcttcctcactttccaaaccgtatcatttgcatctga--cctatt-atgtttcatcctcaacgccttcaccccactgcgt |
29480479 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0242 (Bit Score: 171; Significance: 2e-91; HSPs: 4)
Name: scaffold0242
Description:
Target: scaffold0242; HSP #1
Raw Score: 171; E-Value: 2e-91
Query Start/End: Original strand, 43 - 296
Target Start/End: Complemental strand, 14760 - 14504
Alignment:
| Q |
43 |
gacctatttaggtttcatcctcaacgccgccaccccactgcgtttccacgatcatgactccggtgacgccggtggtccttcctgacgatctcatcgcaga |
142 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | ||||||||||||||| |
|
|
| T |
14760 |
gacctatttaggtttcatcctcaacgccgccaccccactgcgtttccacgatcatgactccggtgacgccggtgttccttccgggcgatctcatcgcaga |
14661 |
T |
|
| Q |
143 |
gttactttccttccttcccgtcaaatctcttgttcgactcaaatgtgttagcaagtcttggaaatccttaatctctgatcccacctttgtgaaattacac |
242 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||| |||||||||||| |||| |||||||| || |||| ||||||||||| ||||||||||||||| |
|
|
| T |
14660 |
gttactttccttccttcccgtgaaatctcttgttcgattcaaatgtgttaacaaggcttggaaaaccctaatatctgatcccacttttgtgaaattacac |
14561 |
T |
|
| Q |
243 |
ctcaatcg---atcttcaacaagaaattcactcttcacaataggcacgctgcacgtc |
296 |
Q |
| |
|
|||||||| ||| |||||| ||||| ||||||||||| ||| || ||||||||| |
|
|
| T |
14560 |
ctcaatcgatcatcgtcaacacgaaatccactcttcacactagtcattctgcacgtc |
14504 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0242; HSP #2
Raw Score: 171; E-Value: 2e-91
Query Start/End: Original strand, 43 - 296
Target Start/End: Complemental strand, 23595 - 23339
Alignment:
| Q |
43 |
gacctatttaggtttcatcctcaacgccgccaccccactgcgtttccacgatcatgactccggtgacgccggtggtccttcctgacgatctcatcgcaga |
142 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | ||||||||||||||| |
|
|
| T |
23595 |
gacctatttaggtttcatcctcaacgccgccaccccactgcgtttccacgatcatgactccggtgacgccggtgttccttccgggcgatctcatcgcaga |
23496 |
T |
|
| Q |
143 |
gttactttccttccttcccgtcaaatctcttgttcgactcaaatgtgttagcaagtcttggaaatccttaatctctgatcccacctttgtgaaattacac |
242 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||| |||||||||||| |||| |||||||| || |||| ||||||||||| ||||||||||||||| |
|
|
| T |
23495 |
gttactttccttccttcccgtgaaatctcttgttcgattcaaatgtgttaacaaggcttggaaaaccctaatatctgatcccacttttgtgaaattacac |
23396 |
T |
|
| Q |
243 |
ctcaatcg---atcttcaacaagaaattcactcttcacaataggcacgctgcacgtc |
296 |
Q |
| |
|
|||||||| ||| |||||| ||||| ||||||||||| ||| || ||||||||| |
|
|
| T |
23395 |
ctcaatcgatcatcgtcaacacgaaatccactcttcacactagtcattctgcacgtc |
23339 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0242; HSP #3
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 341 - 677
Target Start/End: Complemental strand, 14468 - 14135
Alignment:
| Q |
341 |
gggttacagtgtcgttccttactcgttaaacggtttaattcaaaacccgttgttcaccctttcggtcgatccttaccatcatttgggtgataaagaatgt |
440 |
Q |
| |
|
|||| |||||||||||||||||||||||||| |||||||||||||||| | ||||||||||| |||||||| ||| ||| |||| | || | || | |
|
|
| T |
14468 |
gggtaacagtgtcgttccttactcgttaaaccgtttaattcaaaacccatcattcaccctttctgtcgatccgtactatcgtttgaccggtagacaaagc |
14369 |
T |
|
| Q |
441 |
tctttaatgattggtagctgcaatggattgattcttttggctggcggtgattctcaattgggatattttcgtctatggaacccagccacaatgacaatat |
540 |
Q |
| |
|
|||| || || |||| ||||||||| |||||||||||| ||||||||| || || ||||||||||| |||||||||||| |||||| || || | |
|
|
| T |
14368 |
tcttatataatcggtacctgcaatggtttgattcttttgattggcggtga---tctatatggatattttcggctatggaacccaaccacaagaacgatgt |
14272 |
T |
|
| Q |
541 |
ctccaaattttgggtattttgtccgtttccacagcagtgcaacccaccctttcccgtttcttttctattacaatttcacctttggatgtgataattctac |
640 |
Q |
| |
|
|| || ||||| ||||| | |||| ||||| |||| ||||| |||| |||||||| | ||||||| |||| |||||| |||||| ||||| |
|
|
| T |
14271 |
cttacaaatttggccattttcgcagttttgacagccctgcacaccaccgtttcacgtttcttggccattacaaattcagctttggtcttgataactctac |
14172 |
T |
|
| Q |
641 |
tggcacatataagatagtggcatccaattacaatcca |
677 |
Q |
| |
|
|| || || ||||||||||| ||||||||||||||| |
|
|
| T |
14171 |
tgatacttacaagatagtggcgtccaattacaatcca |
14135 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0242; HSP #4
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 341 - 677
Target Start/End: Complemental strand, 23303 - 22970
Alignment:
| Q |
341 |
gggttacagtgtcgttccttactcgttaaacggtttaattcaaaacccgttgttcaccctttcggtcgatccttaccatcatttgggtgataaagaatgt |
440 |
Q |
| |
|
|||| |||||||||||||||||||||||||| |||||||||||||||| | ||||||||||| |||||||| ||| ||| |||| | || | || | |
|
|
| T |
23303 |
gggtaacagtgtcgttccttactcgttaaaccgtttaattcaaaacccatcattcaccctttctgtcgatccgtactatcgtttgaccggtagacaaagc |
23204 |
T |
|
| Q |
441 |
tctttaatgattggtagctgcaatggattgattcttttggctggcggtgattctcaattgggatattttcgtctatggaacccagccacaatgacaatat |
540 |
Q |
| |
|
|||| || || |||| ||||||||| |||||||||||| ||||||||| || || ||||||||||| |||||||||||| |||||| || || | |
|
|
| T |
23203 |
tcttatataatcggtacctgcaatggtttgattcttttgattggcggtga---tctatatggatattttcggctatggaacccaaccacaagaacgatgt |
23107 |
T |
|
| Q |
541 |
ctccaaattttgggtattttgtccgtttccacagcagtgcaacccaccctttcccgtttcttttctattacaatttcacctttggatgtgataattctac |
640 |
Q |
| |
|
|| || ||||| ||||| | |||| ||||| |||| ||||| |||| |||||||| | ||||||| |||| |||||| |||||| ||||| |
|
|
| T |
23106 |
cttacaaatttggccattttcgcagttttgacagccctgcacaccaccgtttcacgtttcttggccattacaaattcagctttggtcttgataactctac |
23007 |
T |
|
| Q |
641 |
tggcacatataagatagtggcatccaattacaatcca |
677 |
Q |
| |
|
|| || || ||||||||||| ||||||||||||||| |
|
|
| T |
23006 |
tgatacttacaagatagtggcgtccaattacaatcca |
22970 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 3)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 109 - 244
Target Start/End: Complemental strand, 4367492 - 4367357
Alignment:
| Q |
109 |
cgccggtggtccttcctgacgatctcatcgcagagttactttccttccttcccgtcaaatctcttgttcgactcaaatgtgttagcaagtcttggaaatc |
208 |
Q |
| |
|
||||||||||||| |||| |||||||| || ||| ||||||| || || ||||| |||| |||| ||||| ||| ||||| || |||||||||||| |
|
|
| T |
4367492 |
cgccggtggtcctctctgatgatctcattgctgaggtactttcgtttctccccgttaaatatcttcttcgattcaggtgtgtcagtaagtcttggaaaaa |
4367393 |
T |
|
| Q |
209 |
cttaatctctgatcccacctttgtgaaattacacct |
244 |
Q |
| |
|
| | |||||||||||| ||||||||||| ||||||| |
|
|
| T |
4367392 |
cctcatctctgatcccgcctttgtgaaactacacct |
4367357 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 145 - 244
Target Start/End: Complemental strand, 4015836 - 4015737
Alignment:
| Q |
145 |
tactttccttccttcccgtcaaatctcttgttcgactcaaatgtgttagcaagtcttggaaatccttaatctctgatcccacctttgtgaaattacacct |
244 |
Q |
| |
|
||||||| || ||||| || | ||||||||||||| ||| ||||| || |||||||||||| || |||| || ||| |||||||||||||||| ||||| |
|
|
| T |
4015836 |
tactttcatttcttccagtgagatctcttgttcgattcaggtgtgtgagtaagtcttggaaaaccctaatttccgattccacctttgtgaaattgcacct |
4015737 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 145 - 241
Target Start/End: Original strand, 10218160 - 10218256
Alignment:
| Q |
145 |
tactttccttccttcccgtcaaatctcttgttcgactcaaatgtgttagcaagtcttggaaatccttaatctctgatcccacctttgtgaaattaca |
241 |
Q |
| |
|
|||||||||| ||||| || |||||||||||| | ||| ||||| || || ||||||||| || |||| ||||| ||||| |||||||||||||| |
|
|
| T |
10218160 |
tactttcctttcttccggtgaaatctcttgtttgcttcaggtgtgtgagtaaatcttggaaaaccctaatttctgaacccacttttgtgaaattaca |
10218256 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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